+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Shimwellia blattae
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ACRISPR-Cas system
B Universal Cas proteins
C EBL_c30630 putative CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C EBL_c30620 putative CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D EBL_c30710 putative helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D EBL_c30680 putative CRISPR-associated protein K19123 casA; CRISPR system Cascade subunit CasA
D EBL_c30670 putative CRISPR-associated protein K19046 casB; CRISPR system Cascade subunit CasB
D EBL_c30660 putative CRISPR-associated protein K19124 casC; CRISPR system Cascade subunit CasC
D EBL_c30650 putative CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD
D EBL_c30640 putative CRISPR-associated protein K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C EBL_c34770 hsdR; type I restriction enzyme EcoKI R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C EBL_c34750 hsdS; type-1 restriction enzyme StySJI specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C EBL_c34760 hsdM; type I restriction enzyme StySJI M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D EBL_c02430 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D EBL_c20750 N-terminal part of DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D EBL_c21970 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EBL_c15340 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EBL_c20820 putative site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C EBL_c20630 putative phage-related protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
D EBL_c06580 Hok/Gef-like protein K18921 hokB; protein HokB
D EBL_c06570 Hok/Gef-like protein K18921 hokB; protein HokB
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
D EBL_c15280 putative PemK-like toxin protein K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D EBL_c15270 putative PemI-like antitoxin protein K18842 chpS; antitoxin ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D EBL_c14330 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D EBL_c14320 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
D EBL_c19490 HipA-like domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
C HicA-HicB
C YafO-YafN
C Hha-TomB
D EBL_c28640 hha; hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D EBL_c28630 ybaJ; putative cytoplasmic protein K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D EBL_c16490 pspC; phage shock protein C K03973 pspC; phage shock protein C
D EBL_c16480 pspB; phage shock protein B K03970 pspB; phage shock protein B
C CcdB-CcdA
D EBL_c21160 putative toxin of gyrase inhibiting toxin-antitoxin system K19163 ccdB; toxin CcdB
D EBL_c21170 putative antitoxin of gyrase inhibiting toxin-antitoxin system K19164 ccdA; antitoxin CcdA
C ParE-ParD
D EBL_c06240 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D EBL_c34100 putative addiction module antidote protein K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
D EBL_c01190 hypothetical protein K19165 phd; antitoxin Phd
C HigB-HigA
D EBL_c00750 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D EBL_c00520 hypothetical protein K07334 higB-1; toxin HigB-1
D EBL_c00760 ygjM; putative transcriptional regualtory protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D EBL_c00510 hypothetical protein K21498 higA-1; antitoxin HigA-1
D EBL_c08390 yddM; addiction module antidote-like protein K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D EBL_c35020 yjgK; protein YjgK K19334 tabA; biofilm protein TabA
D EBL_c07240 hypothetical protein K19334 tabA; biofilm protein TabA
D EBL_c26000 ybiM; putative secreted protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A
D EBL_c24310 bssS; biofilm regulator BssS K12148 bssS; biofilm regulator BssS
D EBL_c25730 bssR; biofilm regulator BssR K19688 bssR; biofilm regulator BssR
D EBL_c23890 ycfR1; putative secreted protein K12151 bhsA; multiple stress resistance protein BhsA
D EBL_c32610 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D EBL_c03430 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D EBL_c05610 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D EBL_c05570 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D EBL_c11150 gltX; glutamate tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D EBL_c06890 ygfX; conserved hypothetical membrane protein K19168 cptA; toxin CptA
D EBL_c06880 ygfY; TPR repeat protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C EBL_c10280 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023