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  Transfer RNA Biogenesis - Escherichia coli O157:H7 Sakai (EHEC)

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D ECs_3156 rbn; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] C CCA adding factors D ECs_3939 cca; tRNA nucleotidyl transferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex D ECs_4264 rtcB; RNA-splicing ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D ECs_3278 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ECs_0196 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ECs_0029 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ECs_0680 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ECs_2920 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ECs_0710 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D ECs_2586 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ECs_3762 lysS; lysine tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ECs_5111 lysS; lysine tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ECs_2576 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D ECs_3554 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ECs_1013 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D ECs_2426 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ECs_0978 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ECs_0588 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ECs_5235 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ECs_3376 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ECs_2421 pheS; phenylalanine tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ECs_2420 pheT; phenylalanine tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ECs_2346 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ECs_4226 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D ECs_4810 dtd; D-tyr-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors D ECs_1481 hinT; purine nucleoside phosphoramidase dadA activator protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D ECs_3836 trmI; tRNA m(7)G46 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D ECs_0197 tsaA; tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] C Psudouridine synthases D ECs_3202 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D ECs_4047 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D ECs_3599 truD; tRNA(Glu) pseudouridine(13) synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors D ECs_3396 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D ECs_4148 tsaC; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ECs_5147 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ECs_4641 mnmE; tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D ECs_4683 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ECs_2470 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors D ECs_5192 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D ECs_4639 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] B 3'processing and CCA adding factors C 3'processing factors D ECs_3156 rbn; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D ECs_2361 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D ECs_4518 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D ECs_0650 rna; ribonuclease I K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21] D ECs_1859 rnb; ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D ECs_2513 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] C CCA adding factors D ECs_3939 cca; tRNA nucleotidyl transferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases D ECs_4264 rtcB; RNA-splicing ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] C Other tRNA splicing factors D ECs_0151 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] B tRNA transport factors C tRNA export factors D ECs_5349 ettA; energy-dependent translational throttle A K06020 ettA; energy-dependent translational throttle protein EttA B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D ECs_0680 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ECs_0196 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D ECs_2346 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ECs_4226 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ECs_2426 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ECs_0029 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ECs_3762 lysS; lysine tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ECs_5111 lysS; lysine tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ECs_3554 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ECs_5235 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ECs_2920 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ECs_0978 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ECs_2576 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ECs_4443 glyQ; glycine tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ECs_4442 glyS; glycine tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ECs_0588 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ECs_3278 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ECs_0710 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D ECs_2586 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ECs_2421 pheS; phenylalanine tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ECs_2420 pheT; phenylalanine tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ECs_3376 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ECs_1013 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D ECs_0148 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] C Trans-editing factors D ECs_4810 dtd; D-tyr-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D ECs_0534 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D ECs_2496 yeaK; aminoacyl-tRNA editing domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] B tRNA modification factors C Deaminases D ECs_3425 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases D ECs_5031 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D ECs_4132 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D ECs_3026 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] C Methylthiotransferases D ECs_0699 miaB; tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] C Methyltransferases D ECs_2580 cmoA; carboxy-SAM synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D ECs_2581 cmoB; tRNA (cmo5U34)-carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D ECs_1004 smtA; S-adenosylmethionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D ECs_5361 lasT; rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D ECs_4896 trmA; tRNA m(5)U54 methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D ECs_3836 trmI; tRNA m(7)G46 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D ECs_3470 trmD; tRNA m(1)G37 methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D ECs_4641 mnmE; tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D ECs_3447 yfiF; methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D ECs_4526 trmH; tRNA mG18-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D ECs_3398 trmJ; tRNA mC32,mU32 2'-O-methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D ECs_4484 trmL; tRNA Leu mC34,mU34 2'-O-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D ECs_0197 tsaA; tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D ECs_3441 trmN; tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] C Psudouridine synthases D ECs_3202 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D ECs_4047 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D ECs_3651 truC; tRNA(Ile1,Asp) pseudouridine(65) synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D ECs_3599 truD; tRNA(Glu) pseudouridine(13) synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D ECs_0062 rluA; 23S rRNA/tRNA pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] C Thiolation factors D ECs_1605 mnmA; tRNA(Gln,Lys,Glu) U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ECs_1928 ttcA; tRNA s(2)C32 thioltransferase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D ECs_4319 tusA; mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ECs_4194 tusB; mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D ECs_4195 tusC; mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D ECs_4196 tusD; tRNA 2-thiouridine synthesizing protein D K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D ECs_1053 tusE; mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D ECs_3394 iscA; FeS cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein D ECs_3396 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ECs_3770 ygfZ; iron-sulfur cluster repair protein K06980 ygfZ; tRNA-modifying protein YgfZ C KEOPS/EKC complex C Other tRNA modification factors D ECs_4683 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ECs_5147 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ECs_3208 mnmC; FAD-dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D ECs_0456 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D ECs_0498 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D ECs_3620 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D ECs_3633 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D ECs_3654 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D ECs_5142 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D ECs_2470 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D ECs_0564 mnmH; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D ECs_0457 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D ECs_0477 thiI; tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D ECs_0190 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D ECs_3336 tmcA; elongator methionine tRNA acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D ECs_2516 tsaB; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D ECs_4148 tsaC; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ECs_3947 tsaD; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D ECs_5144 tsaE; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D ECs_3672 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase B tRNA degradation factors C ECs_5155 rnr; exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C ECs_4045 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024