+D GENES KO #

  KEGG Orthology (KO) - Escherichia coli APEC O1 (APEC)

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ecv00010] D APECO1_4149 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO1_2443 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO1_2553 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO1_793 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APECO1_2160 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO1_2544 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO1_4448 putative fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO1_3608 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2803 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2802 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2550 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APECO1_567 glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO1_847 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO1_3607 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D APECO1_1333 gpmA; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO1_1984 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO1_2843 yibO; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APECO1_3751 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO1_904 pykA; Pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO1_754 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO1_778 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APECO1_1871 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APECO1_1870 aceF; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_551 ydbK; probable pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APECO1_2404 putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APECO1_1645 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO1_355 adhE; CoA-linked acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO1_614 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO1_2864 yiaY; predicted Fe-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO1_2125 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APECO1_1661 yahK; putative zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APECO1_4104 eutG; putative alcohol dehydrogenase in ethanolamine utilization K04022 eutG; alcohol dehydrogenase D APECO1_2866 aldB; aldehyde dehydrogenase B (lactaldehyde dehydrogenase) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D APECO1_2386 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO1_1332 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO1_2583 conserved hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO1_3987 yphB; conserved hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO1_94 agp; glucose-1-phosphatase/inositol phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D APECO1_2582 putative phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D APECO1_1376 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO1_848 yeaD; conserved hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D APECO1_3061 pckA; phosphoenolpyruvate carboxykinase PckA K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APECO1_803 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_3626 bglA; 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_2740 bglB; 6-phospho-beta-glucosidase BglB K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_650 bglA; 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_3810 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_4128 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO1_182 ptsG; fused glucose-specific PTS enzyme IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APECO1_3690 PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_704 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_2642 PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D APECO1_3811 ascF; PTS enzyme II-asc K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:ecv00020] D APECO1_1358 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D APECO1_436 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D APECO1_1318 ybhJ; putative hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D APECO1_1867 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO1_218 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D APECO1_2410 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D APECO1_1353 sucA; alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D APECO1_1352 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO1_2409 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_1350 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO1_2406 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO1_2407 sucC; SucC, succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO1_1351 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO1_1355 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO1_1354 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO1_1357 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APECO1_1356 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APECO1_2235 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO1_2236 frdB; iron-sulfur protein subunit of fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO1_2237 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C D APECO1_2238 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D D APECO1_695 fumA; fumarate hydratase (fumarase A), aerobic Class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO1_2330 fumB; anaerobic class I fumarate hydratase (fumarase B) K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO1_694 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D APECO1_3599 yggD; putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2] D APECO1_3208 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO1_4349 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D APECO1_3061 pckA; phosphoenolpyruvate carboxykinase PckA K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APECO1_1871 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APECO1_1870 aceF; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APECO1_551 ydbK; probable pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:ecv00030] D APECO1_2443 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO1_902 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APECO1_1322 ybhE; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D APECO1_1126 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D APECO1_3077 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D APECO1_3594 tktA; transketolase 1, thiamin-binding K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO1_2641 transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO1_4092 tktB; transketolase 2, thiamin-binding K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO1_4093 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2] D APECO1_1970 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D APECO1_3615 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D APECO1_2360 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D APECO1_2643 putative sugar isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D APECO1_2000 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D APECO1_2711 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D APECO1_1998 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APECO1_3083 yhfW; putative phosphomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APECO1_1376 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO1_2356 phnN; PhnN, ATP-binding component of phosphonate transport K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D APECO1_323 prsA; phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D APECO1_901 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D APECO1_900 eda; 2-keto-3-deoxygluconate 6-phosphate aldolase/2-keto-4-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D APECO1_1861 gcd; glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D APECO1_2895 tkrA; 2-ketoaldonate reductase/glyoxylate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APECO1_3021 gntK; thermoresistant gluconokinase GntK K00851 idnK; gluconokinase [EC:2.7.1.12] D APECO1_2126 idnK; thermosensitive gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D APECO1_2922 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D APECO1_2998 conserved hypothetical protein K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D APECO1_2997 conserved hypothetical protein K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D APECO1_2996 conserved hypothetical protein K17466 dgaC; D-glucosaminate PTS system EIIC component D APECO1_2995 conserved hypothetical protein K17467 dgaD; D-glucosaminate PTS system EIID component D APECO1_4448 putative fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO1_3608 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2803 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2802 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2160 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO1_2544 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO1_2553 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO1_793 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:ecv00040] D APECO1_1317 ybhC; putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D APECO1_3663 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D APECO1_3664 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D APECO1_3327 uxaC; uronate isomerase UxaC K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D APECO1_641 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D APECO1_3328 uxaA; altronate hydrolase UxaA K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D APECO1_2109 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D APECO1_664 rspA; starvation sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D APECO1_2506 rspA; starvation sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D APECO1_2108 uxuB; D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D APECO1_663 rspB; starvation sensing protein RspB K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380] D APECO1_700 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D APECO1_1125 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APECO1_1132 galF; putative UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_350 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_2875 yiaK; 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D APECO1_2870 lyxK; L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D APECO1_2196 sgaH; putative hexulose-6-phosphate synthase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APECO1_2869 sgbH; 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APECO1_2195 ulaE; L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APECO1_2868 sgbU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APECO1_2194 sgaE; probable sugar isomerase SgaE K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO1_1923 araC; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO1_3077 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D APECO1_1922 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D APECO1_1921 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D APECO1_2885 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D APECO1_2884 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D APECO1_2564 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D APECO1_2566 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D APECO1_2805 conserved hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] D APECO1_843 ydjJ; putative zinc-type alcohol dehydrogenase-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D APECO1_3729 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D APECO1_3728 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51] D APECO1_3731 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:ecv00051] D APECO1_1615 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO1_2804 yajF; conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO1_696 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D APECO1_1138 cpsG; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D APECO1_1139 cpsB; Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO1_1143 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D APECO1_1142 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D APECO1_3729 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D APECO1_3728 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51] D APECO1_3731 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D APECO1_4314 yfaW; conserved hypothetical protein K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90] D APECO1_4316 yfaU; putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53] D APECO1_2565 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D APECO1_2564 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D APECO1_2566 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D APECO1_993 yedP; conserved hypothetical protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D APECO1_2553 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO1_793 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APECO1_2160 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO1_2544 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO1_2857 mtlD; MtlD, mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D APECO1_3821 srlD; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D APECO1_2448 sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D APECO1_2453 putative L-sorbose-1-P-reductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D APECO1_3598 putative oxidoreductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D APECO1_4386 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D APECO1_843 ydjJ; putative zinc-type alcohol dehydrogenase-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D APECO1_2884 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D APECO1_4448 putative fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO1_3608 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2803 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2802 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2550 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APECO1_2366 yjcT; D-allose kinase K00881 alsK; allose kinase [EC:2.7.1.55] D APECO1_2360 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D APECO1_2365 yjcU; D-allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-] D APECO1_2799 putative phosphotransferase system (PTS), fructose-specific K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D APECO1_2800 PTS system, fructose-like-2 IIB component 1 K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D APECO1_4387 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO1_2801 putative PTS enzyme-II fructose K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO1_874 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APECO1_875 manY; mannose-specific enzyme IIC K02795 manY; mannose PTS system EIIC component D APECO1_876 manZ; PTS enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component D APECO1_3596 cmtB; PTS system, mannitol-specific enzyme II component, cryptic K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D APECO1_3597 cmtA; PTS system, mannitol (cryptic)-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO1_2858 mtlA; fused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO1_4271 yfbT; putative hydrolase or phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D APECO1_797 yniC; putative phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] D APECO1_3822 srlB; PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D APECO1_3823 srlE; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D APECO1_3824 srlA; PTS system, glucitol/sorbitol-specific IIC2 component K02783 srlA; glucitol/sorbitol PTS system EIIC component D APECO1_2449 putative sorbose PTS component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D APECO1_2450 PTS system, sorbose-specific IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D APECO1_2451 sorA; putative sorbose-permease PTS system IIC component SorA K02814 sorA; sorbose PTS system EIIC component D APECO1_2452 PTS system, mannose-specific IID component K02815 sorM; sorbose PTS system EIID component C 00052 Galactose metabolism [PATH:ecv00052] D APECO1_1332 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO1_2583 conserved hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO1_3987 yphB; conserved hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APECO1_1331 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APECO1_1330 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D APECO1_1329 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APECO1_1132 galF; putative UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_350 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_1376 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO1_4149 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO1_1649 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APECO1_3340 ebgA; evolved beta-galactosidase alpha-subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23] D APECO1_3339 ebgC; evolved beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta D APECO1_2332 melA; alpha-galactosidase, NAD(P)-binding K07406 melA; alpha-galactosidase [EC:3.2.1.22] D APECO1_2971 putative phosphotransferase system enzyme subunit K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO1_4451 gatA; galactitol-specific enzyme IIA of phosphotransferase system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO1_2970 putative phosphotransferase system enzyme subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO1_4452 gatB; galactitol-specific enzyme IIB component of PTS K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO1_4453 gatC; galactitol-specific enzyme IIC component of PTS K02775 gatC; galactitol PTS system EIIC component D APECO1_2969 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D APECO1_4454 gatD; galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding K00094 E1.1.1.251; galactitol-1-phosphate 5-dehydrogenase [EC:1.1.1.251] D APECO1_3188 putative sugar kinase, ribokinase family K21621 fk; tagatose kinase [EC:2.7.1.101] D APECO1_2553 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO1_793 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APECO1_4449 gatY; tagatose-bisphosphate aldolase GatY K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D APECO1_3290 kbaY; tagatose 6-phosphate aldolase 1, KbaY subunit K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D APECO1_3184 putative tagatose-bisphosphate aldolase GatY K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D APECO1_2966 putative aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D APECO1_3297 agaZ; putative tagatose 6-phosphate kinase 2 K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D APECO1_4450 gatZ; putative tagatose 6-phosphate kinase GatZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D APECO1_2765 dgoD; bifunctional 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D APECO1_2625 putative 2-keto-3-deoxygalactokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D APECO1_2763 dgoK; 2-oxo-3-deoxygalactonate kinase DgoK K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D APECO1_2764 dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase DgoA K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D APECO1_1607 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D APECO1_3293 agaF; putative phosphotransferase system enzyme subunit K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D APECO1_3296 agaV; N-acetylgalactosamine-specific enzyme IIB component of PTS K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D APECO1_3295 putative phosphotransferase system enzyme subunit K02746 agaW; N-acetylgalactosamine PTS system EIIC component D APECO1_3294 PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component D APECO1_3292 N-acetylgalactosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25] D APECO1_3291 agaS; tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] D APECO1_3289 agaB; N-acetylgalactosamine-specific enzyme IIB component of PTS K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D APECO1_3288 agaC; PTS system, N-acetylgalactosamine-specific IIC component 1 K10985 agaC; galactosamine PTS system EIIC component D APECO1_3287 agaD; N-acetylglucosamine transport enzyme IID component 1 K10986 agaD; galactosamine PTS system EIID component C 00053 Ascorbate and aldarate metabolism [PATH:ecv00053] D APECO1_1125 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APECO1_700 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D APECO1_2066 yjjN; putative oxidoreductase, Zn-dependent and NAD(P)-binding K23007 lgoD; L-galactonate 5-dehydrogenase [EC:1.1.1.414] D APECO1_2199 sgaT; putative transport protein SgaT K03475 ulaA; ascorbate PTS system EIIC component D APECO1_2200 ulaG; predicted L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-] D APECO1_2196 sgaH; putative hexulose-6-phosphate synthase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APECO1_2869 sgbH; 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APECO1_2195 ulaE; L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APECO1_2868 sgbU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APECO1_2194 sgaE; probable sugar isomerase SgaE K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO1_1923 araC; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APECO1_2875 yiaK; 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D APECO1_2870 lyxK; L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D APECO1_3744 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D APECO1_3301 garL; alpha-dehydro-beta-deoxy-D-glucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D APECO1_3299 garD; putative D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] C 00500 Starch and sucrose metabolism [PATH:ecv00500] D APECO1_1607 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D APECO1_1132 galF; putative UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_350 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_4417 bglX; beta-D-glucoside glucohydrolase-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D APECO1_29152 bcsA; putative ATPases involved in chromosome partitioning K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D APECO1_805 celC; CelC K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO1_652 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO1_807 celA; PEP-dependent phosphotransferase enzyme IV K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO1_654 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO1_806 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D APECO1_653 conserved hypothetical protein K02761 celB; cellobiose PTS system EIIC component D APECO1_803 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_3626 bglA; 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_2740 bglB; 6-phospho-beta-glucosidase BglB K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_650 bglA; 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_3810 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APECO1_3027 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D APECO1_3028 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D APECO1_3025 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D APECO1_3029 glgP; glycogen phosphorylase GlgP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APECO1_3049 malP; maltodextrin phosphorylase MalP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APECO1_3026 glgX; glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D APECO1_2879 malS; periplasmic alpha-amylase precursor MalS K01176 AMY; alpha-amylase [EC:3.2.1.1] D APECO1_968 amyA; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D APECO1_3050 malQ; 4-alpha-glucanotransferase MalQ K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D APECO1_470 ycjU; putative beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D APECO1_4128 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO1_3690 PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_704 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_942 otsA; trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D APECO1_943 otsB; trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D APECO1_314 treA; periplasmic trehalase precursor TreA K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D APECO1_2929 treF; cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D APECO1_2152 treB; TreB, trehalose specific PTS system enzyme II K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APECO1_2153 treC; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D APECO1_1376 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO1_4149 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO1_2443 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO1_1615 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO1_2804 yajF; conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ecv00520] D APECO1_3115 yheB; putative bifunctional chitinase/lysozyme K13381 chiA; bifunctional chitinase/lysozyme [EC:3.2.1.14 3.2.1.17] D APECO1_188 nagZ; beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D APECO1_4128 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO1_1393 nagE; fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB, and IIA components K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APECO1_200 ycfX; putative NAGC-like transcriptional regulator K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D APECO1_1395 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D APECO1_1394 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D APECO1_1615 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO1_2804 yajF; conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APECO1_2732 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO1_3256 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D APECO1_2731 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D APECO1_4118 yfeV; putative PTS system IIBC component YfeV K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D APECO1_4119 yfeU; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D APECO1_723 ydhH; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D APECO1_3245 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APECO1_2495 murB; MurB, UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APECO1_3221 nanK; N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60] D APECO1_3220 nanE; putative N-acetylmannosamine-6-P epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D APECO1_3471 neuB; sialic acid synthase NeuB K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56] D APECO1_3218 nanA; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D APECO1_3472 neuA; acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] D APECO1_26882 rffE; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APECO1_2688 rffD; UDP-N-acetyl glucosamine-2-epimerase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D APECO1_4306 yfbG; putative nucleoside-diphosphate-sugar epimerase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D APECO1_4308 yfbE; conserved hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D APECO1_4307 yfbF; putative glycosyltransferase YfbF K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D APECO1_4305 yfbH; conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D APECO1_182 ptsG; fused glucose-specific PTS enzyme IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APECO1_3690 PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_704 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_2642 PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D APECO1_4149 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO1_1376 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO1_1132 galF; putative UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_350 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_1125 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APECO1_1331 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APECO1_1330 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D APECO1_1329 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APECO1_874 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APECO1_875 manY; mannose-specific enzyme IIC K02795 manY; mannose PTS system EIIC component D APECO1_876 manZ; PTS enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component D APECO1_2443 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO1_696 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D APECO1_1138 cpsG; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D APECO1_1139 cpsB; Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO1_1143 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D APECO1_1142 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D APECO1_3027 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:ecv00620] D APECO1_2386 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO1_551 ydbK; probable pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APECO1_1871 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APECO1_1870 aceF; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_3310 tdcE; putative formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO1_15 pflB; PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO1_355 adhE; CoA-linked acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO1_4102 eutE; ethanolamine utilization protein EutE acetaldehyde dehydrogenase K04021 eutE; aldehyde dehydrogenase D APECO1_614 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO1_2864 yiaY; predicted Fe-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO1_1645 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO1_2125 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APECO1_1661 yahK; putative zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APECO1_4104 eutG; putative alcohol dehydrogenase in ethanolamine utilization K04022 eutG; alcohol dehydrogenase D APECO1_4268 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D APECO1_4099 eutI; putative phosphotransacetylase subunit K04020 eutD; phosphotransacetylase D APECO1_904 pykA; Pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO1_754 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO1_1802 accA; acetyl-CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APECO1_3191 accB; acetylCoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APECO1_3190 accC; acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APECO1_4248 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APECO1_73 yccX; putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D APECO1_2866 aldB; aldehyde dehydrogenase B (lactaldehyde dehydrogenase) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D APECO1_2185 putative acetyl-CoA:acetoacetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D APECO1_2417 putative propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D APECO1_2850 lldD; L-lactate dehydrogenase, FMN-linked K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D APECO1_2404 putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APECO1_1223 poxB; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D APECO1_554 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D APECO1_4416 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D APECO1_566 aldA; aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D APECO1_733 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D APECO1_1778 gloB; putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D APECO1_39 ycbL; YcbL K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D APECO1_1002 hchA; heat shock protein (Hsp) 31, subunit of Hsp31 homodimer K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D APECO1_118 ycdW; putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APECO1_2895 tkrA; 2-ketoaldonate reductase/glyoxylate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APECO1_615 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D APECO1_4094 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D APECO1_3208 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO1_4349 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D APECO1_695 fumA; fumarate hydratase (fumarase A), aerobic Class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO1_2330 fumB; anaerobic class I fumarate hydratase (fumarase B) K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APECO1_694 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D APECO1_3599 yggD; putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2] D APECO1_2235 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO1_2236 frdB; iron-sulfur protein subunit of fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO1_2237 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C D APECO1_2238 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D D APECO1_2511 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D APECO1_3061 pckA; phosphoenolpyruvate carboxykinase PckA K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APECO1_778 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APECO1_3451 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D APECO1_2462 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_1909 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ecv00630] D APECO1_2461 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D APECO1_2386 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO1_3451 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D APECO1_2462 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D APECO1_3208 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO1_1358 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D APECO1_436 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D APECO1_1318 ybhJ; putative hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D APECO1_1867 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_3613 conserved hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO1_3448 glcD; glycolate oxidase subunit D K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D APECO1_3449 glcF; glycolate oxidase iron-sulfur subunit K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D APECO1_801 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D APECO1_118 ycdW; putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APECO1_2895 tkrA; 2-ketoaldonate reductase/glyoxylate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APECO1_3078 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D APECO1_2592 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO1_3980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO1_3625 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APECO1_3623 gcvT; putative aminomethyltransferase of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_3624 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D APECO1_1507 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D APECO1_2095 gclA; putative glycoxylate carboligase GclA K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D APECO1_2096 gclR; putative regulatory protein GclR K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D APECO1_1506 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D APECO1_2097 ghbD; putative 3-hydroxyisobutyrate dehydrogenase GhbD K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D APECO1_1505 ybbQ; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D APECO1_3302 yhaE; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D APECO1_3303 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_1501 glxK; glycerate kinase II K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_2098 gclK; putative glycerate kinase GclK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_566 aldA; aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D APECO1_3732 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D APECO1_3353 ttdA; tartrate dehydratase K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32] D APECO1_3352 ttdB; L(+)-tartrate dehydratase K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32] D APECO1_900 eda; 2-keto-3-deoxygluconate 6-phosphate aldolase/2-keto-4-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D APECO1_25712 fdoG; formate dehydrogenase-O, large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APECO1_2571 fdoG; formate dehydrogenase-O, large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APECO1_2572 fdoH; formate dehydrogenase-O, Fe-S subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D APECO1_2573 fdoI; formate dehydrogenase-O, cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma D APECO1_346 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D APECO1_4163 putative oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] C 00640 Propanoate metabolism [PATH:ecv00640] D APECO1_2386 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO1_1654 prpE; putative propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D APECO1_2185 putative acetyl-CoA:acetoacetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D APECO1_2417 putative propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D APECO1_4268 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D APECO1_3309 tdcD; propionate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15] D APECO1_2288 putative acetate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_3310 tdcE; putative formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO1_15 pflB; PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO1_3192 yhdH; putative oxidoreductase, Zn-dependent and NAD(P)-binding K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO1_1802 accA; acetyl-CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APECO1_3191 accB; acetylCoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APECO1_3190 accC; acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APECO1_4248 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APECO1_3858 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO1_3613 conserved hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO1_2407 sucC; SucC, succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO1_1351 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO1_1350 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO1_2406 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO1_1656 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D APECO1_1655 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D APECO1_1867 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APECO1_1657 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D APECO1_2404 putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APECO1_68 mgsA; MgsA K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D APECO1_3414 yqhD; putative alcohol dehydrogenase, NAD(P)-dependent K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D APECO1_840 ydjG; putative oxidoreductase K18471 ydjG; methylglyoxal reductase [EC:1.1.1.-] D APECO1_2521 gldA; glycerol dehydrogenase, NAD K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D APECO1_2102 cglD; glycerol dehydrogenase CglD K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D APECO1_3732 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D APECO1_2282 putative iron-containing alcohol dehydrogenase K13921 pduQ; 1-propanol dehydrogenase D APECO1_2291 eutE; ethanolamine utilization protein EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87] C 00650 Butanoate metabolism [PATH:ecv00650] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO1_2184 conserved hypothetical protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D APECO1_2418 putative enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D APECO1_4338 atoD; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D APECO1_4337 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D APECO1_770 ydiF; fused predicted acetyl-CoA:acetoacetyl-CoA transferase K19709 ydiF; acetate CoA-transferase [EC:2.8.3.8] D APECO1_355 adhE; CoA-linked acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO1_1355 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO1_1354 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO1_1357 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APECO1_1356 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APECO1_2235 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO1_2236 frdB; iron-sulfur protein subunit of fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO1_2237 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C D APECO1_2238 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D D APECO1_2931 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_621 gadA; glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_3858 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO1_3859 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO1_645 yneI; aldehyde-dehydrogenase like protein YneI K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D APECO1_2588 conserved hypothetical protein K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373] D APECO1_3310 tdcE; putative formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO1_15 pflB; PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APECO1_551 ydbK; probable pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APECO1_2703 ilvG; acetolactate synthase II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_1907 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_2781 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_1906 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO1_2782 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO1_2702 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ecv00660] D APECO1_2703 ilvG; acetolactate synthase II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_1907 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_2781 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_1906 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO1_2782 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO1_2702 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APECO1_2407 sucC; SucC, succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO1_1351 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APECO1_1350 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO1_2406 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APECO1_1911 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D APECO1_1912 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D APECO1_1910 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ecv00562] D APECO1_3992 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D APECO1_84 appA; phosphoanhydride phosphorylase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D APECO1_2550 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ecv00190] D APECO1_4277 nuoA; NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D APECO1_4278 nuoB; NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D APECO1_4279 nuoC; NADH:ubiquinone oxidoreductase, chain C,D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D APECO1_4280 nuoE; NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D APECO1_4281 nuoF; NADH:ubiquinone oxidoreductase, chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D APECO1_4282 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D APECO1_4283 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D APECO1_4284 nuoI; NADH dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D APECO1_4285 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D APECO1_4286 nuoK; NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D APECO1_4287 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D APECO1_4288 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D APECO1_4289 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D APECO1_190 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D APECO1_1355 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO1_1354 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO1_1357 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APECO1_1356 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APECO1_2235 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO1_2236 frdB; iron-sulfur protein subunit of fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO1_2237 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C D APECO1_2238 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D D APECO1_1583 cyoE; cytochrome o ubiquinol oxidase C subunit K02257 COX10; heme o synthase [EC:2.5.1.141] D APECO1_1582 cyoD; cytochrome O ubiquinol oxidase protein CyoD K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D APECO1_1581 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D APECO1_1580 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D APECO1_1579 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D APECO1_1348 cydA; cytochrome d terminal oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APECO1_82 appC; cytochrome bd-II oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APECO1_83 appB; cytochrome bd-II oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APECO1_2729 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D APECO1_2728 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D APECO1_2725 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APECO1_2165 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D APECO1_4068 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ecv00680] D APECO1_1645 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO1_4397 yeiG; putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D APECO1_1646 yaiM; conserved hypothetical protein K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D APECO1_25712 fdoG; formate dehydrogenase-O, large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APECO1_2571 fdoG; formate dehydrogenase-O, large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APECO1_2572 fdoH; formate dehydrogenase-O, Fe-S subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D APECO1_2573 fdoI; formate dehydrogenase-O, cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma D APECO1_2372 fdhF; formate dehydrogenase-H, selenopolypeptide subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D APECO1_23722 fdhF; formate dehydrogenase-H, selenopolypeptide subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D APECO1_3980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO1_3751 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO1_2511 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D APECO1_3208 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO1_4448 putative fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APECO1_3608 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2803 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2802 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APECO1_2160 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO1_2544 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APECO1_2553 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO1_793 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APECO1_2643 putative sugar isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D APECO1_90 torA; trimethylamine-N-oxide reductase 1 precursor K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO1_89 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D APECO1_91 torD; chaperone protein TorD K03533 torD; TorA specific chaperone D APECO1_923 torY; TMAO reductase III (TorYZ), cytochrome c-type subunit K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY D APECO1_922 bisZ; trimethylamine-N-oxide reductase 2 precursor K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO1_4268 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D APECO1_2386 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO1_778 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APECO1_1333 gpmA; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO1_1984 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO1_2843 yibO; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APECO1_3693 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO1_3616 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO1_19 serC; SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APECO1_1993 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ecv00910] D APECO1_340 narK; nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APECO1_606 narU; nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APECO1_341 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO1_605 narZ; respiratory nitrate reductase 2 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO1_342 narH; nitrate reductase 1, beta (Fe-S) subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO1_604 narY; cryptic nitrate reductase 2, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO1_344 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO1_602 narV; respiratory nitrate reductase 2 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO1_4353 napA; periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D APECO1_4356 napB; nitrate reductase, small, cytochrome C550 subunit, periplasmic K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D APECO1_3091 nirB; nitrite reductase, large subunit, NAD(P)H-binding K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D APECO1_3090 nirD; nitrite reductase (NAD(P)H) subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D APECO1_2385 nrfA; nitrite reductase NrfA, formate-dependent, cytochrome K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D APECO1_1221 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D APECO1_831 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APECO1_2592 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO1_32232 gltB; glutamate synthase small subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APECO1_3223 gltD; glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D APECO1_3652 yqeA; putative amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_2636 carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_2143 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_1668 yahI; putative carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_1494 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_1859 yadF; putative carbonic anhdrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ecv00920] D APECO1_4121 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APECO1_2552 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APECO1_4122 cysT; sulfate/thiosulfate transporter subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D APECO1_4123 cysW; sulfate/thiosulfate transporter subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D APECO1_4124 cysA; sulfate transport ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APECO1_1639 tauA; taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D APECO1_1637 tauC; taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein D APECO1_1638 tauB; taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APECO1_1636 tauD; alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D APECO1_48 ssuA; SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D APECO1_46 ssuC; SsuC K15554 ssuC; sulfonate transport system permease protein D APECO1_45 ssuB; SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APECO1_47 ssuD; SsuD K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D APECO1_49 ssuE; SsuE K00299 ssuE; FMN reductase [EC:1.5.1.38] D APECO1_3773 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APECO1_3772 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APECO1_37732 cysC; sulfate adenylyltransferase subunit 1 K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D APECO1_2172 cysQ; PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D APECO1_3770 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D APECO1_3768 sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D APECO1_3769 cysI; sulfite reductase [NADPH] hemoprotein beta-component CysI K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D APECO1_749 ydhU; putative cytochrome K08354 phsC; thiosulfate reductase cytochrome b subunit D APECO1_4003 sseA; 3-mercaptopyruvate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APECO1_3042 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D APECO1_2848 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D APECO1_4131 cysK; cysteine synthase A, O-acetylserine sulfhydrolase A subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D APECO1_2463 metA; homoserine O-succinyltransferase MetA K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D APECO1_2532 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APECO1_1195 dmsA; Anaerobic dimethyl sulfoxide reductase chain A precursor K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D APECO1_1194 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D APECO1_1193 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ecv00061] D APECO1_1802 accA; acetyl-CoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APECO1_3191 accB; acetylCoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APECO1_3190 accC; acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APECO1_4248 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APECO1_173 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO1_172 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D APECO1_4241 fabB; 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APECO1_176 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APECO1_174 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO1_59 fabA; FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D APECO1_1807 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APECO1_447 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APECO1_863 fadD; long chain fatty acid CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ecv00071] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4224 yfcY; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_2612 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO1_1746 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D APECO1_863 fadD; long chain fatty acid CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D APECO1_3670 aas; bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D APECO1_1645 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO1_355 adhE; CoA-linked acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO1_614 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO1_2864 yiaY; predicted Fe-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:ecv00121] D APECO1_702 hdhA; 7-alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ecv00561] D APECO1_3303 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_1501 glxK; glycerate kinase II K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_2098 gclK; putative glycerate kinase GclK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_1661 yahK; putative zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APECO1_2103 ptnC; putative DHA kinase PtnC K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D APECO1_317 dhaK; dihydroxyacetone kinase, N-terminal domain K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D APECO1_2104 ptnK; putative DHA kinase PtnK K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D APECO1_316 dhaL; dihydroxyacetone kinase, C-terminal domain K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D APECO1_315 ycgC; putative phosphoenolpyruvate kinase (PTS system EI component in bacteria) K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D APECO1_2521 gldA; glycerol dehydrogenase, NAD K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D APECO1_2102 cglD; glycerol dehydrogenase CglD K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D APECO1_2543 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D APECO1_2428 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APECO1_171 pslX; Fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D APECO1_3355 ygiH; conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APECO1_3401 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D APECO1_2427 dgkA; diacylglycerol kinase DgkA K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D APECO1_2332 melA; alpha-galactosidase, NAD(P)-binding K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:ecv00564] D APECO1_2847 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D APECO1_4320 glpA; sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D APECO1_3041 glpD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D APECO1_4319 glpB; anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D APECO1_4318 glpC; sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D APECO1_2428 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APECO1_3355 ygiH; conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APECO1_3401 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D APECO1_2427 dgkA; diacylglycerol kinase DgkA K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D APECO1_2655 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D APECO1_2651 pldB; lysophospholipase L(2) K01048 pldB; lysophospholipase [EC:3.1.1.5] D APECO1_4322 glpQ; glycerophosphodiester phosphodiesterase, periplasmic K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D APECO1_3010 ugpQ; cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D APECO1_3670 aas; bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D APECO1_4106 eutA; ethanolamine utilization protein EutA K04019 eutA; ethanolamine utilization protein EutA D APECO1_4107 eutB; putative regulatory subunit of ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D APECO1_4108 eutC; ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D APECO1_2551 cdh; CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D APECO1_560 ynbB; putative phosphatidate cytidiltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D APECO1_1812 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D APECO1_3947 pssA; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D APECO1_954 pgsA; phosphatidylglycerophosphate synthetase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D APECO1_1592 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D APECO1_438 pgpB; non-essential phosphatidylglycerophosphate phosphatase K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D APECO1_364 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D APECO1_1301 ybhO; conserved hypothetical protein YbhO K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D APECO1_131 ymdC; putative synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:ecv00565] D APECO1_2655 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:ecv00600] D APECO1_1649 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APECO1_2332 melA; alpha-galactosidase, NAD(P)-binding K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism D APECO1_2655 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D APECO1_2655 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:ecv00592] D APECO1_2655 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D APECO1_4224 yfcY; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_2612 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:ecv01040] D APECO1_1515 tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D APECO1_1559 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D APECO1_369 conserved hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ecv00230] D APECO1_3379 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D APECO1_3067 nudE; ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D APECO1_1998 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APECO1_3083 yhfW; putative phosphomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APECO1_1376 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO1_323 prsA; phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D APECO1_4252 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D APECO1_2470 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D APECO1_4069 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D APECO1_899 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D APECO1_3974 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D APECO1_4070 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D APECO1_1493 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D APECO1_1492 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D APECO1_4081 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D APECO1_213 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D APECO1_2469 purH; bifunctional AICAR formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APECO1_1546 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D APECO1_1535 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APECO1_3779 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APECO1_1397 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APECO1_3065 yrfG; putative hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D APECO1_1538 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D APECO1_4138 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D APECO1_1997 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D APECO1_1617 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D APECO1_3937 yfiH; conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D APECO1_1860 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D APECO1_4018 guaB; inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D APECO1_4006 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APECO1_1985 yjjX; conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D APECO1_3567 yggV; putative ribosomal protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D APECO1_1731 gpt; xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D APECO1_3659 xanthine dehydrogenase, molybdenum binding subunit K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D APECO1_3658 ygeT; xanthine dehydrogenase, FAD binding subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D APECO1_4019 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D APECO1_1884 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D APECO1_3643 ygfP; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D APECO1_2813 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D APECO1_4326 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO1_3846 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO1_4325 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO1_3845 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO1_2154 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D APECO1_1825 dgt; deoxyguanosine triphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D APECO1_4273 yfbR; putative alpha helix protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D APECO1_2048 yfdR; conserved hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO1_3868 yfdR; conserved hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO1_2811 spoT; guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D APECO1_2694 gppA; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D APECO1_4067 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D APECO1_3747 relA; (p)ppGpp synthetase I/GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D APECO1_2672 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D APECO1_2215 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D APECO1_706 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D APECO1_1068 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D APECO1_3736 ygdH; conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D APECO1_2787 ade; cryptic adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D APECO1_2173 cpdB; 2':3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D APECO1_1541 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D APECO1_3749 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APECO1_3381 icc; regulator of lacZ K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D APECO1_1933 apaH; bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D APECO1_37732 cysC; sulfate adenylyltransferase subunit 1 K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D APECO1_3773 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APECO1_3772 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APECO1_1005 yedX; conserved hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D APECO1_1503 allB; allantoinase K01466 allB; allantoinase [EC:3.5.2.5] D APECO1_1499 allC; N-carbamoyl-L-amino acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D APECO1_1500 ylbA; conserved hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D APECO1_1509 allA; ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D APECO1_1498 allD; ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350] D APECO1_3652 yqeA; putative amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_2636 carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_2143 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_1668 yahI; putative carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_1494 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:ecv00240] D APECO1_1949 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D APECO1_1950 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D APECO1_2147 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D APECO1_2148 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D APECO1_144 pyrC; PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3] D APECO1_50 pyrD; PyrD K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D APECO1_2819 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D APECO1_441 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D APECO1_1816 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D APECO1_4006 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APECO1_3749 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APECO1_3197 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D APECO1_3750 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D APECO1_22 cmk; Cmk K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D APECO1_829 ynjG; CTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65] D APECO1_1157 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D APECO1_1535 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APECO1_3779 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APECO1_1397 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APECO1_20522 yjjG; conserved hypothetical protein K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D APECO1_2630 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D APECO1_1617 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D APECO1_4071 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D APECO1_2173 cpdB; 2':3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D APECO1_4388 yeiC; putative sugar kinase K16328 psuK; pseudouridine kinase [EC:2.7.1.83] D APECO1_4389 yeiN; conserved hypothetical protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D APECO1_43912 rihB; ribonucleoside hydrolase 2 K10213 rihB; ribosylpyrimidine nucleosidase [EC:3.2.2.8] D APECO1_1412 ybeK; conserved hypothetical protein K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D APECO1_1953 rihC; putative ribonucleoside hydrolase 3 K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-] D APECO1_3736 ygdH; conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D APECO1_4407 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D APECO1_1652 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D APECO1_2154 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D APECO1_1156 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D APECO1_4326 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO1_3846 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO1_4325 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO1_3845 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO1_4273 yfbR; putative alpha helix protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D APECO1_2048 yfdR; conserved hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO1_3868 yfdR; conserved hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D APECO1_179 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D APECO1_2821 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D APECO1_1999 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D APECO1_352 tdk; thymidine kinase/deoxyuridine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D APECO1_3678 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D APECO1_4405 yeiT; putative oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D APECO1_4404 yeiA; putative dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D APECO1_3653 ygeZ; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D APECO1_103 ycdM; putative monooxygenase YcdM K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46] D APECO1_98 ycdH; predicted oxidoreductase, flavin:NADH component K09024 rutF; flavin reductase [EC:1.5.1.-] D APECO1_102 conserved hypothetical protein K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110] D APECO1_101 ycdK; conserved hypothetical protein K09021 rutC; aminoacrylate peracid reductase D APECO1_100 rarA; predicted hydrolase K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-] D APECO1_6592 ydfG; putative oxidoreductase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D APECO1_99 ycdI; putative NADH dehydrogenase/NAD(P)H nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ecv00250] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO1_3957 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D APECO1_836 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APECO1_3564 ansB; L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APECO1_1265 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APECO1_2719 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D APECO1_1398 asnB; glutamine-hydrolyzing asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D APECO1_1748 yafV; putative C-N hydrolase family amidase, NAD(P)-binding K13566 NIT2; omega-amidase [EC:3.5.1.3] D APECO1_4274 yfbQ; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APECO1_2250 aspA; aspartate ammonia-lyase (aspartase) K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D APECO1_3259 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APECO1_2507 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APECO1_2215 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D APECO1_213 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D APECO1_2147 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D APECO1_2148 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D APECO1_2931 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_621 gadA; glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_3858 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO1_3859 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO1_645 yneI; aldehyde-dehydrogenase like protein YneI K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D APECO1_32232 gltB; glutamate synthase small subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APECO1_3223 gltD; glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D APECO1_831 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APECO1_105 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APECO1_2592 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO1_1949 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D APECO1_1950 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D APECO1_644 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO1_1527 ybaS; putative glutaminase YbaS K01425 glsA; glutaminase [EC:3.5.1.2] D APECO1_2732 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO1_4252 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ecv00260] D APECO1_2444 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D APECO1_1976 thrA; bifunctional aspartokinase I/homeserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APECO1_2531 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APECO1_3024 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APECO1_1975 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D APECO1_1974 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D APECO1_1224 ybjU; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D APECO1_3980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO1_118 ycdW; putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APECO1_2895 tkrA; 2-ketoaldonate reductase/glyoxylate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APECO1_3303 garK; glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_1501 glxK; glycerate kinase II K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_2098 gclK; putative glycerate kinase GclK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APECO1_1333 gpmA; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO1_1984 gpmB; putative phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO1_2843 yibO; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APECO1_3693 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO1_3616 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO1_19 serC; SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APECO1_1993 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D APECO1_6592 ydfG; putative oxidoreductase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D APECO1_2838 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D APECO1_2839 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D APECO1_3625 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APECO1_3623 gcvT; putative aminomethyltransferase of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_3624 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D APECO1_3947 pssA; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D APECO1_1679 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D APECO1_1678 betB; betaine aldehyde dehydrogenase, NAD-dependent K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D APECO1_871 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO1_3734 sdaB; L-serine deaminase II K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO1_3312 tdcG; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO1_3307 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APECO1_2699 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APECO1_4170 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D APECO1_3666 ygeA; conserved hypothetical protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D APECO1_421 trpA; tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D APECO1_422 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ecv00270] D APECO1_2848 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D APECO1_4131 cysK; cysteine synthase A, O-acetylserine sulfhydrolase A subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D APECO1_3417 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO1_705 malY; bifunctional beta-cystathionase, PLP-dependent/regulator of maltose regulon K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO1_3691 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO1_2458 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APECO1_2647 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D APECO1_3589 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APECO1_2302 putative S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APECO1_1865 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D APECO1_1864 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D APECO1_1826 conserved hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D APECO1_3937 yfiH; conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D APECO1_2411 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APECO1_998 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_O1R127 cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_3834 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D APECO1_2444 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D APECO1_1976 thrA; bifunctional aspartokinase I/homeserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APECO1_2531 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APECO1_3024 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APECO1_2463 metA; homoserine O-succinyltransferase MetA K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D APECO1_2532 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APECO1_2701 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO1_3833 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D APECO1_3574 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO1_4003 sseA; 3-mercaptopyruvate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APECO1_2404 putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APECO1_3666 ygeA; conserved hypothetical protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D APECO1_960 yedO; putative 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D APECO1_3208 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APECO1_871 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO1_3734 sdaB; L-serine deaminase II K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO1_3312 tdcG; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APECO1_4125 cysM; cysteine synthase B (O-acetylserine sulfhydrolase B) K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D APECO1_3693 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO1_3616 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO1_19 serC; SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ecv00280] D APECO1_2701 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO1_4224 yfcY; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_2612 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_3613 conserved hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO1_3858 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ecv00290] D APECO1_3307 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APECO1_2699 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APECO1_1911 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D APECO1_1912 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D APECO1_1910 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D APECO1_2703 ilvG; acetolactate synthase II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_1907 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_2781 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_1906 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO1_2782 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO1_2702 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APECO1_2697 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D APECO1_2700 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D APECO1_2701 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO1_2878 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D APECO1_4274 yfbQ; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APECO1_1909 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ecv00300] D APECO1_2444 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D APECO1_1976 thrA; bifunctional aspartokinase I/homeserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APECO1_2531 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APECO1_3024 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APECO1_4079 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APECO1_1389 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APECO1_2993 conserved hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APECO1_1951 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D APECO1_1821 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D APECO1_3096 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APECO1_4085 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D APECO1_2667 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D APECO1_3668 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D APECO1_1901 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APECO1_1900 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ecv00310] D APECO1_1352 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO1_2409 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_3666 ygeA; conserved hypothetical protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D APECO1_1801 ldcC; lysine decarboxylase, constitutive K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D APECO1_2322 cadA; lysine decarboxylase 1 K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D APECO1_3343 ygjG; putative ornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APECO1_586 ydcW; medium chain aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APECO1_3858 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO1_3859 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO1_3861 ygaT; conserved hypothetical protein K15737 csiD; glutarate dioxygenase [EC:1.14.11.64] D APECO1_3860 ygaF; conserved hypothetical protein K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D APECO1_571 ydcJ; conserved hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D APECO1_764 ydiJ; putative FAD-linked oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D APECO1_4338 atoD; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D APECO1_4337 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00220 Arginine biosynthesis [PATH:ecv00220] D APECO1_2144 argF; ornithine carbamoyltransferase chain I K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D APECO1_2140 argI; ornithine carbamoyltransferase 1 K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D APECO1_3259 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APECO1_2507 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APECO1_2142 putative arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D APECO1_644 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO1_1527 ybaS; putative glutaminase YbaS K01425 glsA; glutaminase [EC:3.5.1.2] D APECO1_2592 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO1_831 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APECO1_3652 yqeA; putative amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_2636 carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_2143 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_1668 yahI; putative carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_1494 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO1_4274 yfbQ; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APECO1_3687 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D APECO1_2508 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D APECO1_2509 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D APECO1_3096 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APECO1_2510 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:ecv00330] D APECO1_1652 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D APECO1_2334 adiA; biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D APECO1_2264 conserved hypothetical protein K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D APECO1_3590 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D APECO1_3592 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D APECO1_3536 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO1_1374 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO1_1864 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D APECO1_1865 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D APECO1_3343 ygjG; putative ornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APECO1_586 ydcW; medium chain aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APECO1_667 spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D APECO1_816 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D APECO1_814 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D APECO1_817 cstC; succinylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D APECO1_815 thrL; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D APECO1_813 ydjS; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D APECO1_1622 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D APECO1_105 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APECO1_1727 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D APECO1_1726 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:ecv00340] D APECO1_1116 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D APECO1_1123 hisI; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D APECO1_1121 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D APECO1_1120 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D APECO1_1122 hisF; imidazole glycerol phosphate synthase subunit in heterodimer with HisH K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D APECO1_1119 hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D APECO1_1118 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO1_1117 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:ecv00350] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO1_1118 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO1_2411 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APECO1_1645 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO1_355 adhE; CoA-linked acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APECO1_614 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO1_2864 yiaY; predicted Fe-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO1_3859 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO1_1289 ybiC; hypothetical oxidoreductase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-] C 00360 Phenylalanine metabolism [PATH:ecv00360] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO1_1118 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO1_2411 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APECO1_3016 yhhY; putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D APECO1_301 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D APECO1_1289 ybiC; hypothetical oxidoreductase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-] D APECO1_2524 katG; catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:ecv00380] D APECO1_1352 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO1_2409 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_2752 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] D APECO1_801 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D APECO1_2524 katG; catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ecv00400] D APECO1_3932 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO1_780 aroH; 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO1_1334 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO1_O1CoBM134 conserved hypothetical protein K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO1_3074 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D APECO1_769 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D APECO1_3165 conserved hypothetical protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D APECO1_768 ydiB; quinate/shikimate 5-dehydrogenase, NAD(P)-binding K05887 ydiB; quinate/shikimate dehydrogenase [EC:1.1.1.282] D APECO1_1620 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71] D APECO1_3073 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D APECO1_20 aroA; AroA K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D APECO1_4235 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D APECO1_425 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D APECO1_424 trpD; fused glutamine amidotransferase (component II) of anthranilate synthase and anthranilate phosphoribosyl transferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] D APECO1_423 trpC; anthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D APECO1_421 trpA; tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D APECO1_422 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D APECO1_3933 pheA; fused chorismate mutase P/prephenate dehydratase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D APECO1_3934 conserved hypothetical protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO1_1118 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO1_2411 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ecv00410] D APECO1_1854 conserved hypothetical protein K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D APECO1_2931 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_621 gadA; glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_3858 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO1_586 ydcW; medium chain aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APECO1_1852 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D APECO1_4405 yeiT; putative oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D APECO1_4404 yeiA; putative dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D APECO1_3653 ygeZ; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00430 Taurine and hypotaurine metabolism [PATH:ecv00430] D APECO1_2931 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_621 gadA; glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_3012 ggt; gamma-glutamyltranspeptidase precursor Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APECO1_1636 tauD; alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D APECO1_4268 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:ecv00440] D APECO1_2357 phnO; PhnO, putative regulator of phn operon K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280] D APECO1_2351 phnI; PhnI, carbon-phosphorus lyase complex subunit K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D APECO1_2349 phnG; PhnG, carbon-phosphorus lyase complex subunit K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D APECO1_2350 phnH; PhnH, carbon-phosphorus lyase complex subunit K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D APECO1_2354 phnL; phosphonates transport ATP-binding protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D APECO1_2355 phnM; PhnM, carbon-phosphorus lyase complex subunit K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D APECO1_2358 phnP; PhnP, carbon-phosphorus lyase complex accessory protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ecv00450] D APECO1_2532 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APECO1_3417 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO1_705 malY; bifunctional beta-cystathionase, PLP-dependent/regulator of maltose regulon K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO1_3691 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO1_2458 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APECO1_2647 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D APECO1_757 sufS; selenocysteine lyase, PLP-dependent K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D APECO1_1201 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D APECO1_670 ynfE; putative dimethyl sulfoxide reductase chain YnfE precursor K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9] D APECO1_671 ynfF; putative dimethyl sulfoxide reductase chain YnfF precursor K07310 ynfF; Tat-targeted selenate reductase subunit YnfF [EC:1.97.1.9] D APECO1_3648 ygfK; putative oxidoreductase, Fe-S subunit K12527 ygfK; putative selenate reductase [EC:1.97.1.9] D APECO1_3645 xdhD; putative xanthine/hypoxanthine oxidase: molybdopterin-binding subunit/Fe-S binding subunit K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D APECO1_3646 ygfM; putative oxidoreductase K12529 ygfM; putative selenate reductase FAD-binding subunit D APECO1_3773 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APECO1_3772 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APECO1_833 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D APECO1_2862 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D APECO1_4433 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ecv00460] D APECO1_4417 bglX; beta-D-glucoside glucohydrolase-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D APECO1_3012 ggt; gamma-glutamyltranspeptidase precursor Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APECO1_836 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APECO1_3564 ansB; L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APECO1_1265 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APECO1_2719 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D APECO1_3980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ecv00470] D APECO1_302 dadX; alanine racemase 2, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D APECO1_2414 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1] D APECO1_1894 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO1_1627 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO1_3666 ygeA; conserved hypothetical protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D APECO1_644 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO1_1527 ybaS; putative glutaminase YbaS K01425 glsA; glutaminase [EC:3.5.1.2] D APECO1_2496 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3] D APECO1_1898 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APECO1_478 ycjG; hypothetical protein YcjG K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D APECO1_4170 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D APECO1_960 yedO; putative 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D APECO1_2667 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D APECO1_3668 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D APECO1_301 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:ecv00480] D APECO1_3012 ggt; gamma-glutamyltranspeptidase precursor Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APECO1_335 chaC; cation transport protein ChaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D APECO1_1362 ybgL; conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D APECO1_1364 ybgJ; conserved hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D APECO1_1363 ybgK; conserved hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D APECO1_1468 ybdK; conserved hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D APECO1_3833 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D APECO1_3574 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D APECO1_2134 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D APECO1_4001 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D APECO1_44 pepN; PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2] D APECO1_1732 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D APECO1_718 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO1_1255 yliJ; predicted glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO1_4263 yfcF; putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO1_2953 gor; glutathione reductase Gor K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D APECO1_218 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D APECO1_1126 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D APECO1_902 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APECO1_785 btuE; vitamin B12 transport protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D APECO1_3536 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO1_1374 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO1_1864 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D APECO1_3433 gsp; glutathionylspermidine synthase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:ecv00511] D APECO1_1649 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APECO1_3340 ebgA; evolved beta-galactosidase alpha-subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23] D APECO1_3339 ebgC; evolved beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta C 00540 Lipopolysaccharide biosynthesis [PATH:ecv00540] D APECO1_1806 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D APECO1_1890 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D APECO1_1808 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D APECO1_1490 ybbF; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D APECO1_1805 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D APECO1_27 lpxK; LpxK K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D APECO1_3238 kdsD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APECO1_3482 kpsF; polysialic acid capsule synthesis protein KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APECO1_3692 phosphosugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APECO1_332 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D APECO1_3237 yrbI; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D APECO1_30 kdsB; KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D APECO1_3479 kpsU; 3-deoxy-manno-octulosonate cytidylyltransferase KpsU K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D APECO1_2825 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D APECO1_137 htrB; HtrB K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D APECO1_905 msbB; myristoyl acyltransferase; (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D APECO1_4380 yeiU; undecaprenyl pyrophosphate phosphatase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D APECO1_2337 yjdB; conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APECO1_2902 yhjW; predicted metal dependent hydrolase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APECO1_1430 crcA; CrcA protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APECO1_4304 yfbI; putative 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D APECO1_4159 ddg; lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D APECO1_1745 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D APECO1_3362 rfaE; fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D APECO1_1787 yaeD; conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D APECO1_2837 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D APECO1_2835 rfaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D APECO1_2836 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D APECO1_2828 rfaP; lipopolysaccharide core biosynthesis protein RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D APECO1_2512 yjjP; conserved hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D APECO1_2826 rfaQ; lipopolysaccharide core biosynthesis glycosyl transferase RfaQ K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D APECO1_2840 yibD; predicted glycosyl transferase YibD K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D APECO1_2831 lipopolysaccharide core biosynthesis protein RfaY K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-] D APECO1_2827 rfaG; lipopolysaccharide core biosynthesis glucosyltransferase I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APECO1_2829 rafI; lipopolysaccharide 1,3-galactosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APECO1_2833 waaV; beta-1,3-glucosyltransferase K12983 waaV; UDP-glucose:(glucosyl)LPS beta-1,3-glucosyltransferase [EC:2.4.1.-] D APECO1_2830 rfaJ; lipopolysaccharide 1,2-glucosyltransferase K03276 waaR; UDP-glucose/galactose:(glucosyl)LPS alpha-1,2-glucosyl/galactosyltransferase [EC:2.4.1.-] D APECO1_2832 rfaJ; UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase K12985 waaW; (galactosyl)LPS 1,2-glucosyltransferase [EC:2.4.1.-] D APECO1_2834 waaL; lipid A-core, surface polymer ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:ecv00542] D APECO1_2690 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ecv00541] D APECO1_1132 galF; putative UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_350 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APECO1_1329 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APECO1_1125 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APECO1_1129 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO1_2686 rffH; lipopolysaccharide biosynthesis protein RffH K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO1_1131 rfbB; RfbB, subunit of dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO1_2687 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO1_1128 rmlC; putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D APECO1_1130 rmlD; dTDP-6-deoxy-D-glucose-3,5 epimerase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D APECO1_2684 rffA; TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D APECO1_2685 rffC; lipopolysaccharide biosynthesis protein RffC K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D APECO1_696 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D APECO1_1138 cpsG; Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D APECO1_1139 cpsB; Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APECO1_1143 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D APECO1_1142 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D APECO1_2731 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D APECO1_26882 rffE; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APECO1_2688 rffD; UDP-N-acetyl glucosamine-2-epimerase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D APECO1_3473 neuC; polysialic acid biosynthesis protein K24257 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183] D APECO1_3471 neuB; sialic acid synthase NeuB K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56] D APECO1_3472 neuA; acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] C 00550 Peptidoglycan biosynthesis [PATH:ecv00550] D APECO1_3245 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APECO1_2495 murB; MurB, UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APECO1_1895 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D APECO1_1898 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APECO1_1901 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APECO1_1894 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO1_1627 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO1_1900 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D APECO1_1813 conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D APECO1_3357 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO1_1252 ybjG; undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO1_1899 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APECO1_1896 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D APECO1_3227 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D APECO1_3068 mrcA; peptidoglycan synthetase; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APECO1_1836 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APECO1_4005 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APECO1_1420 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APECO1_1902 ftsI; peptidoglycan synthetase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APECO1_1423 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_1254 dacC; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_1108 dacD; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_3250 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:ecv00552] D APECO1_3357 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO1_1252 ybjG; undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO1_2690 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ecv00543] D APECO1_1137 wcaJ; putative colanic acid biosynthsis UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D APECO1_1140 wcaI; Putative colanic acid biosynthesis glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI D APECO1_1144 wcaF; Putative colanic acid biosynthesis acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D APECO1_1145 wcaE; Putative colanic acid biosynthesis glycosyl transferase K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D APECO1_1147 wcaC; putative glycosyltransferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D APECO1_1148 wcaB; Putative colanic acid biosynthesis acetyltransferase K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-] D APECO1_1149 wcaA; Putative colanic acid biosynthesis glycosyl transferase K25875 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA D APECO1_1134 wcaL; putative colanic acid biosynthesis glycosyl transferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D APECO1_1135 wcaK; colanic acid biosynthesis protein K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ D APECO1_2690 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D APECO1_2680 wecG; putative UDP-N-acetyl-D-mannosaminuronic acid transferase WecG K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D APECO1_2682 rffT; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D APECO1_113 ycdQ; predicted glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D APECO1_112 ycdP; predicted inner membrane protein K11937 pgaD; biofilm PGA synthesis protein PgaD D APECO1_2848 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ecv00730] D APECO1_2481 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D APECO1_4442 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D APECO1_2482 thiF; thiazole biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D APECO1_3995 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APECO1_1588 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APECO1_2484 thiH; thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D APECO1_1590 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D APECO1_2483 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D APECO1_4441 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D APECO1_24812 thiE; thiamine biosynthesis protein ThiC K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D APECO1_1593 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D APECO1_2228 yjeQ; ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D APECO1_1625 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO1_187 ycfN; conserved hypothetical protein K07251 thiK; thiamine kinase [EC:2.7.1.89] D APECO1_1541 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ecv00740] D APECO1_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APECO1_1596 ribD; bifunctional pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D APECO1_1249 ybjI; conserved hypothetical protein with a phophatase-like domain K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D APECO1_2664 yigB; putative phosphatase/hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D APECO1_3366 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D APECO1_1595 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D APECO1_742 ribE; riboflavin synthase, alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D APECO1_1958 ribF; putative regulator K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D APECO1_84 appA; phosphoanhydride phosphorylase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D APECO1_2401 aphA; diadenosine tetraphosphatase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2] D APECO1_2613 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D APECO1_49 ssuE; SsuE K00299 ssuE; FMN reductase [EC:1.5.1.38] D APECO1_4441 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D APECO1_3379 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D APECO1_216 putative phosphohydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D APECO1_4253 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:ecv00750] D APECO1_721 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D APECO1_719 pdxY; pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D APECO1_4127 pdxK; pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D APECO1_558 putative dehydrogenase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D APECO1_3606 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D APECO1_4244 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D APECO1_19 serC; SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APECO1_1930 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D APECO1_3967 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D APECO1_1974 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:ecv00760] D APECO1_3957 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D APECO1_1338 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D APECO1_1880 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D APECO1_43 pncB; PncB K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D APECO1_4138 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D APECO1_1997 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D APECO1_1991 nadR; transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D APECO1_2412 NadR transcriptional repressor / NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D APECO1_1535 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APECO1_3779 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APECO1_1397 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APECO1_1416 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D APECO1_3749 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APECO1_2479 nudC; NADH pyrophosphatase NudC K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D APECO1_809 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D APECO1_3826 ygaD; conserved hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D APECO1_837 ydjB; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D APECO1_201 cobB; deacetylase of acetyl-CoA synthetase, NAD-dependent K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D APECO1_3919 yfjB; probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D APECO1_2503 udhA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D APECO1_686 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D APECO1_685 NAD/NADP transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D APECO1_3859 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APECO1_645 yneI; aldehyde-dehydrogenase like protein YneI K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:ecv00770] D APECO1_2703 ilvG; acetolactate synthase II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_1907 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_2781 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APECO1_1906 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO1_2782 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APECO1_2702 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APECO1_2697 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D APECO1_2700 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D APECO1_1851 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D APECO1_1586 apbA; 2-dehydropantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D APECO1_1852 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D APECO1_2493 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D APECO1_2822 dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D APECO1_3749 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APECO1_1885 coaC; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D APECO1_3968 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D APECO1_2979 acpT; holo-(acyl carrier protein) synthase 2 K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D APECO1_1606 yajB; conserved hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D APECO1_2701 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO1_4405 yeiT; putative oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D APECO1_4404 yeiA; putative dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D APECO1_3653 ygeZ; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D APECO1_1854 conserved hypothetical protein K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:ecv00780] D APECO1_1312 bioC; biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D APECO1_4241 fabB; 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APECO1_176 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APECO1_174 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO1_1807 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APECO1_447 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APECO1_3054 bioH; carboxylesterase involved in biosynthesis of pimeloyl-CoA/carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D APECO1_3443 conserved hypothetical protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APECO1_1313 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APECO1_1315 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D APECO1_1311 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D APECO1_676 ynfK; putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D APECO1_1314 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D APECO1_2494 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D APECO1_2897 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:ecv00785] D APECO1_1425 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D APECO1_1427 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D APECO1_1995 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_1871 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APECO1_1870 aceF; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APECO1_2410 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D APECO1_1353 sucA; alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D APECO1_1352 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO1_2409 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APECO1_3625 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APECO1_3623 gcvT; putative aminomethyltransferase of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APECO1_3624 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ecv00790] D APECO1_4398 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D APECO1_1625 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO1_915 ntpA; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D APECO1_3356 folB; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D APECO1_1843 folK; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D APECO1_3255 folP; 7,8-dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D APECO1_O1R95 sulI; SulI K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D APECO1_1934 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D APECO1_4249 folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D APECO1_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APECO1_3095 pabA; para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D APECO1_869 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D APECO1_177 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D APECO1_4261 folX; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D APECO1_689 ydgB; putative oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D APECO1_3767 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D APECO1_3756 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D APECO1_1567 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D APECO1_3737 yqcD; conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D APECO1_1308 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D APECO1_1306 moaC; molybdopterin biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D APECO1_1305 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D APECO1_1969 mog; molybdopterin biosynthesis Mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D APECO1_1307 moaB; molybdopterin biosynthesis, protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D APECO1_1266 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D APECO1_3649 ygfJ; conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D APECO1_2604 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:ecv00670] D APECO1_1934 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D APECO1_689 ydgB; putative oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D APECO1_1486 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D APECO1_3980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APECO1_4069 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D APECO1_2469 purH; bifunctional AICAR formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APECO1_3159 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D APECO1_3623 gcvT; putative aminomethyltransferase of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APECO1_2458 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APECO1_3678 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D APECO1_346 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D APECO1_2525 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D APECO1_3617 putative 5-formyltetrahydrofolate cyclo-ligase-family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ecv00860] D APECO1_4141 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO1_327 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D APECO1_1831 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D APECO1_1635 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D APECO1_2673 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D APECO1_2674 hemD; uroporphyrinogen-III synthetase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D APECO1_2478 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D APECO1_4112 hemF; coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D APECO1_2595 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D APECO1_2607 hemG; protoporphyrin oxidase, flavoprotein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D APECO1_1540 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D APECO1_2675 hemX; uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D APECO1_3088 cysG; multifunctional protein; Uroporphyrin-III C-methyltransferase; Ferrochelatase; Precorrin-2 oxidase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D APECO1_1583 cyoE; cytochrome o ubiquinol oxidase C subunit K02257 COX10; heme o synthase [EC:2.5.1.141] D APECO1_O1R35 putative ATP-binding protein K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D APECO1_430 btuR; cob(I)alamin adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D APECO1_1074 cobU; cobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D APECO1_1073 cobS; putative cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D APECO1_1072 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D APECO1_1417 phpB; alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D APECO1_4098 eutT; putative cobalamin adenosyltransferase in ethanolamine utilization K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154] D APECO1_700 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D APECO1_3116 bfr; bacterioferritin, iron storage and detoxification protein Bfr K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ecv00130] D APECO1_2430 ubiC; chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D APECO1_2429 ubiA; 4-hydroxybenzoate-octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D APECO1_2614 ubiD; 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D APECO1_4253 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APECO1_3622 visC; VisC protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D APECO1_4328 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D APECO1_3621 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D APECO1_2622 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase protein UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D APECO1_1401 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D APECO1_4296 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D APECO1_1456 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D APECO1_4297 menD; menaquinone biosynthesis protein MenD K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D APECO1_4298 yfbB; putative dihydrolipoyllysine-residue acetyltransferase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D APECO1_4300 menC; O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D APECO1_4301 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D APECO1_4299 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D APECO1_763 ydiI; conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D APECO1_2540 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D APECO1_95 wrbA; trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D APECO1_3783 conserved hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D APECO1_2175 ytfG; conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ecv00900] D APECO1_1590 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D APECO1_1814 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D APECO1_3776 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D APECO1_324 ychB; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D APECO1_3777 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D APECO1_4009 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D APECO1_1954 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4253 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APECO1_3638 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D APECO1_1589 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D APECO1_3247 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D APECO1_1813 conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:ecv00907] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO1_2125 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APECO1_4224 yfcY; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_2612 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D APECO1_3594 tktA; transketolase 1, thiamin-binding K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO1_2641 transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APECO1_4092 tktB; transketolase 2, thiamin-binding K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ecv00523] D APECO1_1129 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO1_2686 rffH; lipopolysaccharide biosynthesis protein RffH K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO1_1131 rfbB; RfbB, subunit of dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO1_2687 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO1_1128 rmlC; putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D APECO1_1130 rmlD; dTDP-6-deoxy-D-glucose-3,5 epimerase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ecv01053] D APECO1_4296 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D APECO1_1456 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D APECO1_1454 entB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D APECO1_1453 entA; 2,3-dihydroxybenzoate-2,3-dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D APECO1_1466 entD; 4'-phosphopantetheinyl transferase EntD K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D APECO1_1455 entE; 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D APECO1_1463 entF; enterobactin synthase multienzyme complex component, ATP-dependent K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D APECO1_1452 conserved hypothetical protein K24147 entH; proofreading thioesterase EntH D APECO1_1052 putative anthranilate synthase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21] D APECO1_1062 ybtE; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D APECO1_1058 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D APECO1_1060 ybtU; yersiniabactin biosynthetic protein K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component D APECO1_1059 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase C 01055 Biosynthesis of vancomycin group antibiotics D APECO1_1131 rfbB; RfbB, subunit of dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO1_2687 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ecv00946] D APECO1_4417 bglX; beta-D-glucoside glucohydrolase-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:ecv00332] D APECO1_1727 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D APECO1_1726 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ecv00261] D APECO1_3773 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APECO1_3772 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APECO1_2444 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D APECO1_1976 thrA; bifunctional aspartokinase I/homeserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APECO1_2531 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APECO1_3024 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APECO1_4079 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APECO1_1389 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APECO1_2993 conserved hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APECO1_1951 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ecv00521] D APECO1_4149 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APECO1_1376 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APECO1_3992 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D APECO1_1129 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO1_2686 rffH; lipopolysaccharide biosynthesis protein RffH K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO1_1131 rfbB; RfbB, subunit of dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO1_2687 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO1_1128 rmlC; putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D APECO1_1130 rmlD; dTDP-6-deoxy-D-glucose-3,5 epimerase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D APECO1_4149 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:ecv00525] D APECO1_1129 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO1_2686 rffH; lipopolysaccharide biosynthesis protein RffH K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APECO1_1131 rfbB; RfbB, subunit of dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APECO1_2687 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ecv00401] D APECO1_3933 pheA; fused chorismate mutase P/prephenate dehydratase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO1_1118 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO1_2411 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D APECO1_425 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D APECO1_173 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO1_174 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO1_447 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:ecv00998] D APECO1_O1CoBM84 conserved hypothetical protein K18652 ntdC; glucose-6-phosphate 3-dehydrogenase [EC:1.1.1.361] D APECO1_O1CoBM86 conserved hypothetical protein K18653 ntdA; 3-dehydro-glucose-6-phosphate---glutamate transaminase [EC:2.6.1.104] D APECO1_O1CoBM85 conserved hypothetical protein K18654 ntdB; kanosamine-6-phosphate phosphatase [EC:3.1.3.92] C 00999 Biosynthesis of various plant secondary metabolites [PATH:ecv00999] D APECO1_3589 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APECO1_2302 putative S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APECO1_3165 conserved hypothetical protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D APECO1_4417 bglX; beta-D-glucoside glucohydrolase-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites [PATH:ecv00997] D APECO1_O1CoBM169 iucD; IucD K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59] D APECO1_O1CoBM171 IucB K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102] D APECO1_O1CoBM172 iucA; IucA K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38] D APECO1_O1CoBM170 iucC; IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ecv00362] D APECO1_4224 yfcY; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_2612 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:ecv00627] D APECO1_73 yccX; putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D APECO1_4253 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APECO1_4338 atoD; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D APECO1_4337 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D APECO1_770 ydiF; fused predicted acetyl-CoA:acetoacetyl-CoA transferase K19709 ydiF; acetate CoA-transferase [EC:2.8.3.8] C 00364 Fluorobenzoate degradation [PATH:ecv00364] D APECO1_2631 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APECO1_3423 putative hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:ecv00625] D APECO1_614 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO1_2864 yiaY; predicted Fe-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO1_1645 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO1_355 adhE; CoA-linked acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ecv00361] D APECO1_2631 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APECO1_3423 putative hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:ecv00623] D APECO1_2631 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APECO1_3423 putative hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:ecv00633] D APECO1_1242 nfsA; nitroreductase A, NADPH-dependent, FMN-dependent K10678 nfsA; nitroreductase [EC:1.-.-.-] D APECO1_1470 nfnB; dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D APECO1_732 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D APECO1_77 hyaB; hydrogenase-1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D APECO1_3428 hybC; hydrogenase 2, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D APECO1_3425 hybO; hydrogenase 2, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D APECO1_76 hyaA; hydrogenase 1, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation D APECO1_4224 yfcY; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APECO1_2612 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation D APECO1_2185 putative acetyl-CoA:acetoacetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D APECO1_2417 putative propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation D APECO1_2632 putative isochorismatase hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84] C 00930 Caprolactam degradation [PATH:ecv00930] D APECO1_2611 fadB; multifunctional protein; 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APECO1_4225 putative 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:ecv00626] D APECO1_614 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APECO1_2864 yiaY; predicted Fe-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D APECO1_1645 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APECO1_355 adhE; CoA-linked acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ecv03020] D APECO1_2486 rpoB; DNA-directed RNA polymerase beta chain protein RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APECO1_2485 rpoC; RNA polymerase, beta prime subunit RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APECO1_3152 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APECO1_2812 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ecv03010] D APECO1_23 rpsA; RpsA K02945 RP-S1; small subunit ribosomal protein S1 D APECO1_1818 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D APECO1_3136 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D APECO1_3151 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D APECO1_3146 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D APECO1_2192 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D APECO1_3112 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D APECO1_3143 rpsH; 30S ribosomal subunit protein S8, and regulator K02994 RP-S8; small subunit ribosomal protein S8 D APECO1_3214 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D APECO1_3130 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D APECO1_3150 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D APECO1_3111 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D APECO1_3149 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D APECO1_3142 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D APECO1_3265 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D APECO1_3924 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D APECO1_3138 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D APECO1_3134 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D APECO1_3133 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D APECO1_3131 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D APECO1_3132 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D APECO1_3141 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D APECO1_3144 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D APECO1_2190 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D APECO1_2488 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D APECO1_3213 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D APECO1_3139 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D APECO1_3147 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D APECO1_3137 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D APECO1_3153 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D APECO1_3145 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D APECO1_3927 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D APECO1_789 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D APECO1_3135 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D APECO1_3140 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D APECO1_1701 ykgM; 50S ribosomal protein L31 type B-1 K02909 RP-L31; large subunit ribosomal protein L31 C 00970 Aminoacyl-tRNA biosynthesis [PATH:ecv00970] D APECO1_t02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t44 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t51 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t67 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t78 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t05 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t50 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t73 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t43 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t53 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t54 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t55 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t56 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t38 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO1_t39 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO1_t41 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO1_t40 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO1_t03 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO1_t71 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO1_t32 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D APECO1_t06 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO1_t07 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO1_t09 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO1_t10 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO1_t70 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APECO1_t84 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APECO1_t79 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APECO1_t01 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APECO1_t34 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t82 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t28 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t61 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t33 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t86 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t87 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t88 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t74 tRNA-His K14226 tRNA-His; tRNA His D APECO1_t52 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO1_t68 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO1_t77 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO1_t65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t89 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t75 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t91 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t90 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t92 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t49 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t18 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t19 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t17 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t15 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t25 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t36 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t08 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t12 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t63 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t58 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t59 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t60 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t64 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t62 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APECO1_t85 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APECO1_t76 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO1_t42 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO1_t93 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO1_t57 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t21 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t22 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t20 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t66 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t83 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t27 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t35 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t80 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t04 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t72 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D APECO1_t23 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO1_t81 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO1_t24 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO1_t14 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t48 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t47 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t16 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t46 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t29 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t30 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t69 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D APECO1_4141 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO1_1384 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APECO1_3829 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APECO1_916 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APECO1_42 asnS; AsnS K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APECO1_2890 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APECO1_2891 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APECO1_791 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APECO1_1196 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APECO1_2862 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D APECO1_1488 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APECO1_4433 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APECO1_3159 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D APECO1_2136 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APECO1_14132 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APECO1_1957 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APECO1_2324 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO1_3637 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO1_926 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APECO1_1793 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APECO1_4010 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APECO1_788 pheS; phenylalanine tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APECO1_787 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APECO1_720 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APECO1_3079 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ecv03060] D APECO1_3148 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY D APECO1_2491 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D APECO1_3257 secG; putative export membrane protein K03075 secG; preprotein translocase subunit SecG D APECO1_1602 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D APECO1_1601 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D APECO1_1603 yajC; conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D APECO1_2754 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO1_1888 secA; translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APECO1_2846 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D APECO1_1889 secM; SecA regulator SecM K13301 secM; secretion monitor D APECO1_3923 ffh; signal recognition particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APECO1_2989 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D APECO1_2619 tatA; sec-independent twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D APECO1_2618 tatB; sec-independent translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D APECO1_2617 tatC; TatABCE protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D APECO1_3963 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89] D APECO1_1956 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ecv04122] D APECO1_3995 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APECO1_4003 sseA; 3-mercaptopyruvate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APECO1_3110 yheL; putative intracellular sulfur oxidation protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D APECO1_3109 yheM; conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D APECO1_3108 yheN; conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D APECO1_74 yccK; predicted sulfite reductase subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D APECO1_215 ycfB; putative ATPase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D APECO1_1305 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D APECO1_1308 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D APECO1_827 ynjE; putative thiosulfate sulfurtransferase YnjE precursor K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11] D APECO1_1267 moeB; molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D APECO1_1306 moaC; molybdopterin biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D APECO1_1969 mog; molybdopterin biosynthesis Mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D APECO1_1307 moaB; molybdopterin biosynthesis, protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D APECO1_1588 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APECO1_2482 thiF; thiazole biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:ecv03018] D APECO1_3675 ygdP; dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D APECO1_166 rne; Rnase E K08300 rne; ribonuclease E [EC:3.1.26.12] D APECO1_2693 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D APECO1_3751 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO1_3266 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APECO1_1293 rhlE; putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D APECO1_2213 rnr; exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APECO1_3268 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APECO1_2654 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APECO1_2691 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APECO1_2553 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO1_1965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO1_2246 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_O1R91 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_2219 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D APECO1_4068 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D APECO1_1842 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ecv03030] D APECO1_1775 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_O1CoBM130 yacC; YacC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_1803 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO1_1545 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO1_180 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO1_1415 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO1_2135 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO1_2756 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO1_4187 putative replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D APECO1_2415 dnaB; replicative DNA helicase protein DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D APECO1_3349 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D APECO1_2397 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO1_O1CoBM14 ssb; Ssb K03111 ssb; single-strand DNA-binding protein D APECO1_1776 rnhA; RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D APECO1_1804 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D APECO1_2598 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO1_4135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_2814 yicF; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ecv03410] D APECO1_716 nth; endonuclease III; specific for apurinic and/or apyrimidinic sites K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D APECO1_3952 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D APECO1_3560 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D APECO1_2824 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D APECO1_1361 nei; endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D APECO1_1159 alkA; 3-methyl-adenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D APECO1_2899 tag; 3-methyl-adenine DNA glycosylase I, constitutive K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D APECO1_3347 ygjF; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D APECO1_818 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D APECO1_4393 yeiH; conserved hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D APECO1_2598 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO1_3635 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APECO1_4135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_2814 yicF; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ecv03420] D APECO1_195 mfd; transcription-repair coupling factor; mutation frequency decline K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D APECO1_2398 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D APECO1_1310 uvrB; excision nuclease subunit B K03702 uvrB; excinuclease ABC subunit B D APECO1_955 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D APECO1_2663 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO1_O1CoBM78 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO1_2598 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO1_4135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_2814 yicF; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ecv03430] D APECO1_3791 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D APECO1_2221 mutL; MutL, enzyme in methyl-directed mismatch repair K03572 mutL; DNA mismatch repair protein MutL D APECO1_3674 mutH; DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D APECO1_2663 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO1_O1CoBM78 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO1_1109 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D APECO1_4017 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D APECO1_895 exoX; exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D APECO1_3635 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APECO1_2397 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO1_O1CoBM14 ssb; Ssb K03111 ssb; single-strand DNA-binding protein D APECO1_1803 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO1_2756 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO1_1545 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO1_1415 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO1_180 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO1_1775 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_O1CoBM130 yacC; YacC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_2135 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO1_4135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_2814 yicF; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_3076 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO1_O1R219 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:ecv03440] D APECO1_3635 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APECO1_2397 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO1_O1CoBM14 ssb; Ssb K03111 ssb; single-strand DNA-binding protein D APECO1_2757 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D APECO1_3966 recO; gap repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D APECO1_1543 recR; recombination protein RecR K06187 recR; recombination protein RecR D APECO1_3827 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA D APECO1_2598 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO1_911 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA D APECO1_910 ruvB; Holliday junction DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D APECO1_913 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D APECO1_2809 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D APECO1_3685 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D APECO1_3683 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D APECO1_3686 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D APECO1_1803 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO1_2756 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO1_1545 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO1_1415 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO1_180 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO1_1775 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_O1CoBM130 yacC; YacC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_2135 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO1_2535 priA; primosome factor n' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D APECO1_2191 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D APECO1_1548 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D APECO1_2062 dnaT; primosomal protein I K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ecv03250] D APECO1_3093 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda [PATH:ecv03258] D APECO1_255 putative tail fiber component Z of prophage K26967 Z; Enterobacteria phage tail completion protein D APECO1_256 putative tail component of prophage K26968 U; Enterobacteria phage tail tube terminator protein D APECO1_405 putative tail component of prophage K26968 U; Enterobacteria phage tail tube terminator protein D APECO1_257 putative tail component of prophage CP-933X K26969 V; Enterobacteria phage tail tube protein D APECO1_258 Putative tail component of prophage K26970 G; Enterobacteria phage tail assembly protein G D APECO1_259 Putative tail component of prophage K26971 T; Enterobacteria phage tail assembly protein GT D APECO1_260 Putative tail component of prophage K26972 H; Enterobacteria phage tape measure protein D APECO1_407 putative tail component of prophage CP-933O K26972 H; Enterobacteria phage tape measure protein D APECO1_261 minor tail protein K26973 M; Enterobacteria phage tail tip protein M D APECO1_262 putative tail component of prophage K26974 L; Enterobacteria phage tail tip protein L D APECO1_5332 putative minor tail protein K26974 L; Enterobacteria phage tail tip protein L D APECO1_2017 putative minor tail protein K26974 L; Enterobacteria phage tail tip protein L D APECO1_2016 putative tail fiber component K of prophage K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_534 putative tail fiber component K of prophage K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_410 putative tail fiber component K of prophage K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_263 putative tail fiber component K of prophage K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_6004 tail assembly protein K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_265 putative tail component of prophage K26976 I; Enterobacteria phage tail tip assembly protein I D APECO1_535 putative tail component of prophage K26976 I; Enterobacteria phage tail tip assembly protein I D APECO1_2015 putative tail component of prophage CP-933K K26976 I; Enterobacteria phage tail tip assembly protein I D APECO1_2014 putative tail component of prophage K26977 J; Enterobacteria phage tip attachment protein J D APECO1_536 putative tail component of prophage K26977 J; Enterobacteria phage tip attachment protein J D APECO1_416 ynaC; probable phage-related tail fiber assembly protein G K26980 tfa; Enterobacteria phage tail fiber assembly protein # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ecv02010] D APECO1_4121 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APECO1_2552 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APECO1_4122 cysT; sulfate/thiosulfate transporter subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D APECO1_4123 cysW; sulfate/thiosulfate transporter subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D APECO1_4124 cysA; sulfate transport ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APECO1_1639 tauA; taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D APECO1_1637 tauC; taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein D APECO1_1638 tauB; taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APECO1_48 ssuA; SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D APECO1_46 ssuC; SsuC K15554 ssuC; sulfonate transport system permease protein D APECO1_45 ssuB; SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APECO1_1326 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein D APECO1_1325 modB; molybdate transport permease protein K02018 modB; molybdate transport system permease protein D APECO1_1324 modC; ATP-binding component of molybdate transport K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D APECO1_1328 modF; putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein D APECO1_1914 tbpA; thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein D APECO1_1915 thiP; thiamine transport system permease protein ThiP K02063 thiP; thiamine transport system permease protein D APECO1_1916 thiQ; thiamine transport ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D APECO1_204 potD; spermidine/putrescine-binding periplasmic protein precursor PotS K11069 potD; spermidine/putrescine transport system substrate-binding protein D APECO1_206 potC; spermidine/putrescine transport system permease K11070 potC; spermidine/putrescine transport system permease protein D APECO1_207 potB; spermidine-putrescine transport system permease K11071 potB; spermidine/putrescine transport system permease protein D APECO1_208 potA; ATP-binding component of spermidine/putrescine transport K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D APECO1_1239 potF; putrescine-binding periplasmic protein precursor K11073 potF; putrescine transport system substrate-binding protein D APECO1_1236 potI; putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein D APECO1_1237 potH; putrescine transport protein K11075 potH; putrescine transport system permease protein D APECO1_1238 potG; putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D APECO1_3842 proX; glycine betaine transporter subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein D APECO1_3843 proW; glycine betaine/L-proline transport system permease protein P K02001 proW; glycine betaine/proline transport system permease protein D APECO1_3844 proV; ATP-binding component of transport system for glycine, betaine and proline K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D APECO1_4418 yehZ; putative transporter subunit: periplasmic-binding component of ABC superfamily K05845 opuC; osmoprotectant transport system substrate-binding protein D APECO1_4421 yehW; putative transporter subunit: membrane component of ABC superfamily K05846 opuBD; osmoprotectant transport system permease protein D APECO1_4419 yehY; putative transporter subunit: membrane component of ABC superfamily K05846 opuBD; osmoprotectant transport system permease protein D APECO1_4420 yehX; putative transporter subunit: ATP-binding component of ABC superfamily K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D APECO1_2434 malE; periplasmic maltose-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APECO1_2435 malF; maltose transport system permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein D APECO1_2436 malG; maltose transport system permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein D APECO1_2433 malK; maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO1_471 ycjV; hypothetical ABC transporter ATP-binding protein YcjV K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO1_3983 yphF; ABC-type sugar transport system, periplasmic component YphF K23545 yphF; sugar transport system substrate-binding protein D APECO1_3985 yphD; ABC-type sugar transport system permease component YphD K23546 yphD; sugar transport system permease protein D APECO1_3984 yphE; ABC-type sugar transport system, ATP-binding component YphE K23547 yphE; sugar transport system ATP-binding protein D APECO1_3243 yrbC; conserved hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D APECO1_3242 yrbD; putative ABC-type organic solvent transporter K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D APECO1_3241 yrbE; putative toluene transporter subunit: permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D APECO1_3240 yrbF; putative toluene transporter subunit: ATP-binding component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D APECO1_2712 rbsB; D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein D APECO1_3185 putative ribose ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D APECO1_2713 rbsC; ribose ABC transporter permease protein K10440 rbsC; ribose transport system permease protein D APECO1_3187 rbsC; putative ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D APECO1_2714 rbsA; fused D-ribose transporter subunits of ABC superfamily: ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APECO1_3186 rbsA; putative ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APECO1_2715 rbsD; high affinity ribose transport protein RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D APECO1_946 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein D APECO1_944 araH; high-affinity L-arabinose transport system; membrane protein K10538 araH; L-arabinose transport system permease protein D APECO1_945 araG; L-arabinose transport ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D APECO1_2164 ytfQ; ABC transporter periplasmic binding protein YtfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein D APECO1_2162 ytfT; putative ABC transporter permease protein YtfT K23509 ytfT; galactofuranose transport system permease protein D APECO1_2161 yjfF; putative ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein D APECO1_2163 ytfR; putative ATP-binding component of a transport system K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D APECO1_4401 mglB; methyl-galactoside transporter subunit MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D APECO1_4403 mglC; galactoside transport system permease protein MglC K10541 mglC; methyl-galactoside transport system permease protein D APECO1_4402 mglA; galactoside transport ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D APECO1_2883 xylF; ABC-type xylose transport system, periplasmic component XylF K10543 xylF; D-xylose transport system substrate-binding protein D APECO1_28812 xylH; DNA-binding transcriptional activator, xylose-binding K10544 xylH; D-xylose transport system permease protein D APECO1_2882 xylG; ABC-type xylose transport system, ATPase component XylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D APECO1_2362 D-allose-binding periplasmic protein precursor K10549 alsB; D-allose transport system substrate-binding protein D APECO1_2364 alsC; D-allose transport system permease protein AlsC K10550 alsC; D-allose transport system permease protein D APECO1_2363 alsA; D-allose transport ATP-binding protein AlsA K10551 alsA; D-allose transport system ATP-binding protein [EC:7.5.2.8] D APECO1_3006 ugpB; glycerol-3-phosphate transporter subunit UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D APECO1_3007 ugpA; SN-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D APECO1_3008 ugpE; SN-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D APECO1_3009 ugpC; SN-glycerol-3-phosphate transport ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D APECO1_2733 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein D APECO1_2734 pstC; high-affinity phosphate-specific transport system, cytoplasmic membrane component K02037 pstC; phosphate transport system permease protein D APECO1_2735 pstA; high-affinity phosphate-specific transport system, permease component K02038 pstA; phosphate transport system permease protein D APECO1_2736 pstB; high-affinity phosphate-specific transport system, ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D APECO1_2346 phnD; PhnD, subunit of alkylphosphonate ABC transporter K02044 phnD; phosphonate transport system substrate-binding protein D APECO1_2347 phnE; PhnE, subunit of alkylphosphonate ABC transporter K02042 phnE; phosphonate transport system permease protein D APECO1_2345 phnC; PhnC, phosphonate/organophosphate ester transporter subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D APECO1_4254 argT; lysine/arginine/ornithine transporter subunit K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APECO1_4257 hisM; histidine/lysine/arginine/ornithine transporter subunit K10015 hisM; histidine transport system permease protein D APECO1_4256 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein D APECO1_4258 hisP; ATP-binding component of histidine transport K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D APECO1_4255 hisJ; histidine/lysine/arginine/ornithine transporter subunit K10014 hisJ; histidine transport system substrate-binding protein D APECO1_1280 glnH; glutamine ABC transporter periplasmic-binding protein K10036 glnH; glutamine transport system substrate-binding protein D APECO1_1281 glnP; glutamine transport protein GlnP K10037 glnP; glutamine transport system permease protein D APECO1_1282 glnQ; glutamine ABC transporter ATP-binding component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D APECO1_1233 artJ; arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein D APECO1_1230 artI; arginine transporter subunit K09997 artI; arginine transport system substrate-binding protein D APECO1_1232 artM; arginine 3rd transport system permease protein K09998 artM; arginine transport system permease protein D APECO1_1231 artQ; arginine 3rd transport system permease protein K09999 artQ; arginine transport system permease protein D APECO1_1229 artP; arginine transport ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D APECO1_1408 ybeJ; Glutamate/aspartate Periplasmic binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APECO1_1410 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein D APECO1_1409 gltJ; glutamate and aspartate transporter subunit K10003 gltJ; glutamate/aspartate transport system permease protein D APECO1_1411 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APECO1_3172 yhdW; putative periplasmic amino-acid ABC transporter binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D APECO1_3171 yhdX; putative amino-acid ABC transporter permease protein yhdX K09970 aapQ; general L-amino acid transport system permease protein D APECO1_3170 yhdY; putative transport system permease protein K09971 aapM; general L-amino acid transport system permease protein D APECO1_3169 yhdZ; putative amino-acid ABC transporter ATP-binding protein yhdZ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D APECO1_961 fliY; cystine-binding periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein D APECO1_959 yecS; putative transport system permease protein K10009 tcyB; L-cystine transport system permease protein D APECO1_958 yecC; putative amino acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D APECO1_3001 livK; leucine transporter subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO1_2999 livJ; Leu/Ile/Val-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO1_3002 livH; high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D APECO1_3003 livM; leucine/isoleucine/valine transporter subunit LivM K01998 livM; branched-chain amino acid transport system permease protein D APECO1_3004 livG; LivG, ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein D APECO1_3005 livF; ATP-binding component of leucine transport LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D APECO1_2792 nlpA; cytoplasmic membrane lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein D APECO1_1790 metQ; D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D APECO1_1789 metI; D-methionine transport system permease MetI K02072 metI; D-methionine transport system permease protein D APECO1_1788 metN; DL-methionine transporter subunit K02071 metN; D-methionine transport system ATP-binding protein D APECO1_483 mppA; periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D APECO1_358 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D APECO1_359 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein D APECO1_360 oppC; oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein D APECO1_361 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D APECO1_362 oppF; oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D APECO1_2904 dppA; dipeptide transporter protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D APECO1_2905 dppB; dipeptide transporter permease protein DppB K12369 dppB; dipeptide transport system permease protein D APECO1_2906 dppC; dipeptide transport system permease protein DppC K12370 dppC; dipeptide transport system permease protein D APECO1_2907 dppD; dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein D APECO1_2908 dppF; dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein D APECO1_457 sapA; peptide transport periplasmic protein SapA precursor K19226 sapA; cationic peptide transport system substrate-binding protein D APECO1_456 sapB; peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein D APECO1_455 sapC; ABC-type antimicrobial peptide transport system, permease component K19228 sapC; cationic peptide transport system permease protein D APECO1_454 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein D APECO1_453 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein D APECO1_2978 nikA; nickel-binding periplasmic protein precursor NikA K15584 nikA; nickel transport system substrate-binding protein D APECO1_2977 nikB; nickel transport system permease protein NikB K15585 nikB; nickel transport system permease protein D APECO1_2976 nikC; nickel transport system permease protein NikC K15586 nikC; nickel transport system permease protein D APECO1_2975 nikD; nickel transport ATP-binding protein NikD K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D APECO1_2974 nikE; nickel transport ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D APECO1_1263 yliB; predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily K13889 gsiB; glutathione transport system substrate-binding protein D APECO1_12632 yliB; predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily K13889 gsiB; glutathione transport system substrate-binding protein D APECO1_1262 yliC; predicted peptide transporter subunit: membrane component of ABC superfamily K13890 gsiC; glutathione transport system permease protein D APECO1_1261 yliD; predicted peptide transporter subunit: membrane component of ABC superfamily K13891 gsiD; glutathione transport system permease protein D APECO1_1264 yliA; fused predicted peptide transport subunits of ABC superfamily: ATP-binding component K13892 gsiA; glutathione transport system ATP-binding protein D APECO1_4377 yejA; conserved hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D APECO1_4376 yejB; predicted oligopeptide transporter subunit K13894 yejB; microcin C transport system permease protein D APECO1_4375 yejE; putative oligopeptide transporter subunit K13895 yejE; microcin C transport system permease protein D APECO1_4374 yejF; putative ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D APECO1_1457 fepB; ferric enterobactin (enterochelin) binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D APECO1_1459 fepD; ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein D APECO1_1460 fepG; ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D APECO1_1461 fepC; ferric enterobactin transport ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D APECO1_1833 fhuD; iron-hydroxamate transporter subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D APECO1_1832 fhuB; fused iron-hydroxamate transporter subunits of ABC superfamily: membrane component K23228 fhuB; ferric hydroxamate transport system permease protein D APECO1_1834 fhuC; iron-hydroxamate transporter subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D APECO1_1827 yadT; vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D APECO1_786 btuC; vitamin B12 transporter subunit: membrane component of ABC superfamily K06073 btuC; vitamin B12 transport system permease protein D APECO1_784 btuC; vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D APECO1_907 znuA; adhesin-like protein K09815 znuA; zinc transport system substrate-binding protein D APECO1_909 znuB; ZnuB, subunit of ZnuA/ZnuB/ZnuC ABC transporter K09816 znuB; zinc transport system permease protein D APECO1_908 znuC; high-affinity zinc transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D APECO1_274 sitA; ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D APECO1_O1CoBM180 sitA; SitA K11604 sitA; manganese/iron transport system substrate-binding protein D APECO1_272 sitC; ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC K11605 sitC; manganese/iron transport system permease protein D APECO1_O1CoBM178 sitC; SitC K11605 sitC; manganese/iron transport system permease protein D APECO1_O1CoBM177 sitD; SitD K11606 sitD; manganese/iron transport system permease protein D APECO1_271 sitD; ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD K11606 sitD; manganese/iron transport system permease protein D APECO1_O1CoBM179 sitB; SitB K11607 sitB; manganese/iron transport system ATP-binding protein D APECO1_273 sitB; ABC Mn+2/Fe+2 transporter, ATPase subunit SitB K11607 sitB; manganese/iron transport system ATP-binding protein D APECO1_3603 putative permease protein of ABC-type cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein D APECO1_3602 putative ATP-binding protein of ABC transport system K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D APECO1_3601 putative ATP-binding protein of ABC transport system K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D APECO1_3481 kpsE; polysialic acid transport protein KpsE precursor K10107 kpsE; capsular polysaccharide transport system permease protein D APECO1_3468 kpsM; polysialic acid transport protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein D APECO1_3469 kpsT; polysialic acid transport ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D APECO1_197 ycfU; ABC transporter integral membrane subunit K09808 lolC_E; lipoprotein-releasing system permease protein D APECO1_199 ycfW; ABC transporter integral membrane subunit K09808 lolC_E; lipoprotein-releasing system permease protein D APECO1_198 ycfV; ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D APECO1_4360 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C D APECO1_4359 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B D APECO1_4358 ccmA; heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D APECO1_2133 conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D APECO1_3441 putative permease K07091 lptF; lipopolysaccharide export system permease protein D APECO1_2132 yjgQ; conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D APECO1_3442 putative permease K11720 lptG; lipopolysaccharide export system permease protein D APECO1_3234 yhbG; transporter subunit: ATP-binding component of ABC superfamily K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D APECO1_2991 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D APECO1_2990 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APECO1_1056 ybtP; putative inner membrane ABC-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D APECO1_1055 putative ABC transporter protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D APECO1_26 msbA; MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D APECO1_1563 mdlA; multidrug resistance-like ATP-binding protein MdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D APECO1_1562 mdlB; multidrug resistance-like ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D APECO1_O1CoBM140 iroC; IroC K18895 iroC; ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter D APECO1_1203 cydC; Transport ATP-binding protein cydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D APECO1_1202 cydD; Transport ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D APECO1_1215 ybjZ; macrolide-specific ABC-type efflux carrier K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D APECO1_O1CoBM198 etsB; EtsB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D APECO1_4348 yojI; putative ABC transporter ATP-binding protein YojI K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D APECO1_624 yddA; putative ATP-binding component of a transport system K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ecv02060] D APECO1_4129 ptsI; phosphoenolpyruvate-protein phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D APECO1_2967 putative phosphotransferase system HPr enzyme K02784 ptsH; phosphocarrier protein HPr D APECO1_2642 PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D APECO1_4128 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO1_182 ptsG; fused glucose-specific PTS enzyme IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APECO1_1393 nagE; fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB, and IIA components K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APECO1_3690 PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_704 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_2739 bglF; PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D APECO1_3811 ascF; PTS enzyme II-asc K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D APECO1_2152 treB; TreB, trehalose specific PTS system enzyme II K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APECO1_4118 yfeV; putative PTS system IIBC component YfeV K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D APECO1_3596 cmtB; PTS system, mannitol-specific enzyme II component, cryptic K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D APECO1_3597 cmtA; PTS system, mannitol (cryptic)-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO1_2858 mtlA; fused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO1_805 celC; CelC K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO1_652 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO1_807 celA; PEP-dependent phosphotransferase enzyme IV K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO1_654 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO1_806 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D APECO1_653 conserved hypothetical protein K02761 celB; cellobiose PTS system EIIC component D APECO1_874 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APECO1_875 manY; mannose-specific enzyme IIC K02795 manY; mannose PTS system EIIC component D APECO1_876 manZ; PTS enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component D APECO1_2449 putative sorbose PTS component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D APECO1_2450 PTS system, sorbose-specific IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D APECO1_2451 sorA; putative sorbose-permease PTS system IIC component SorA K02814 sorA; sorbose PTS system EIIC component D APECO1_2452 PTS system, mannose-specific IID component K02815 sorM; sorbose PTS system EIID component D APECO1_3293 agaF; putative phosphotransferase system enzyme subunit K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D APECO1_3296 agaV; N-acetylgalactosamine-specific enzyme IIB component of PTS K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D APECO1_3295 putative phosphotransferase system enzyme subunit K02746 agaW; N-acetylgalactosamine PTS system EIIC component D APECO1_3294 PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component D APECO1_3289 agaB; N-acetylgalactosamine-specific enzyme IIB component of PTS K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D APECO1_3288 agaC; PTS system, N-acetylgalactosamine-specific IIC component 1 K10985 agaC; galactosamine PTS system EIIC component D APECO1_3287 agaD; N-acetylglucosamine transport enzyme IID component 1 K10986 agaD; galactosamine PTS system EIID component D APECO1_2998 conserved hypothetical protein K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D APECO1_2997 conserved hypothetical protein K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D APECO1_2996 conserved hypothetical protein K17466 dgaC; D-glucosaminate PTS system EIIC component D APECO1_2995 conserved hypothetical protein K17467 dgaD; D-glucosaminate PTS system EIID component D APECO1_3822 srlB; PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D APECO1_3823 srlE; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D APECO1_3824 srlA; PTS system, glucitol/sorbitol-specific IIC2 component K02783 srlA; glucitol/sorbitol PTS system EIIC component D APECO1_2971 putative phosphotransferase system enzyme subunit K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO1_4451 gatA; galactitol-specific enzyme IIA of phosphotransferase system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO1_2970 putative phosphotransferase system enzyme subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO1_4452 gatB; galactitol-specific enzyme IIB component of PTS K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO1_4453 gatC; galactitol-specific enzyme IIC component of PTS K02775 gatC; galactitol PTS system EIIC component D APECO1_2969 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D APECO1_2199 sgaT; putative transport protein SgaT K03475 ulaA; ascorbate PTS system EIIC component D APECO1_4385 fructose-specific PTS system IIA component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D APECO1_2105 pptE; putative phosphoenolpyruvate-protein phosphoryltransferase PptE K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D APECO1_4387 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO1_2801 putative PTS enzyme-II fructose K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO1_2800 PTS system, fructose-like-2 IIB component 1 K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D APECO1_2799 putative phosphotransferase system (PTS), fructose-specific K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D APECO1_4386 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D APECO1_3676 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D APECO1_3229 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr D APECO1_3231 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ecv03070] D APECO1_3378 tolC; TolC outer membrane-associated protein K12340 tolC; outer membrane protein D APECO1_3458 gspD; putative type II secretion protein GspD K02453 gspD; general secretion pathway protein D D APECO1_3127 hofD; putative general secretion pathway protein D precursor K02453 gspD; general secretion pathway protein D D APECO1_3128 hofC; putative general secretion pathway protein C K02452 gspC; general secretion pathway protein C D APECO1_3457 gspC; putative type II secretion protein GspC K02452 gspC; general secretion pathway protein C D APECO1_3460 gspF; putative type II secretion protein GspF K02455 gspF; general secretion pathway protein F D APECO1_3125 hofF; putative general secretion pathway protein F K02455 gspF; general secretion pathway protein F D APECO1_3461 gspG; putative type II secretion protein GspG K02456 gspG; general secretion pathway protein G D APECO1_3124 hofG; putative general secretion pathway protein G precursor K02456 gspG; general secretion pathway protein G D APECO1_3462 gspH; putative type II secretion protein GspH K02457 gspH; general secretion pathway protein H D APECO1_3123 hofH; putative general secretion pathway protein H precursor K02457 gspH; general secretion pathway protein H D APECO1_3122 hofI; putative general secretion pathway protein I precursor K02458 gspI; general secretion pathway protein I D APECO1_3463 gspI; putative type II secretion protein GspI K02458 gspI; general secretion pathway protein I D APECO1_3121 hofJ; putative general secretion pathway protein J precursor K02459 gspJ; general secretion pathway protein J D APECO1_3464 gspJ; putative type II secretion protein GspJ K02459 gspJ; general secretion pathway protein J D APECO1_3120 hofK; putative general secretion pathway protein K K02460 gspK; general secretion pathway protein K D APECO1_3465 gspK; putative type II secretion protein GspK K02460 gspK; general secretion pathway protein K D APECO1_3119 yheK; putative general secretion pathway protein L K02461 gspL; general secretion pathway protein L D APECO1_3466 gspL; putative type II secretion protein GspL K02461 gspL; general secretion pathway protein L D APECO1_3467 gspM; putative secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D APECO1_3118 pshM; putative general secretion pathway protein M K02462 gspM; general secretion pathway protein M D APECO1_3459 gspE; putative type II secretion protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APECO1_3126 hofE; putative general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APECO1_3117 hofD; type 4 prepilin-like proteins leader peptide processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APECO1_1602 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D APECO1_1601 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D APECO1_2491 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D APECO1_3257 secG; putative export membrane protein K03075 secG; preprotein translocase subunit SecG D APECO1_3148 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY D APECO1_1603 yajC; conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D APECO1_2754 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO1_1888 secA; translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APECO1_1889 secM; SecA regulator SecM K13301 secM; secretion monitor D APECO1_2989 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D APECO1_2846 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D APECO1_3923 ffh; signal recognition particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APECO1_2619 tatA; sec-independent twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D APECO1_2618 tatB; sec-independent translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D APECO1_2617 tatC; TatABCE protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D APECO1_1756 aec15; conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO1_596 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO1_3711 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO1_1757 aec16; conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D APECO1_3713 putative hemolysin-coregulated protein K11903 hcp; type VI secretion system secreted protein Hcp D APECO1_1764 aec24; conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD D APECO1_3696 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD D APECO1_1770 aec30; conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL D APECO1_3705 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL D APECO1_1766 aec26; conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK D APECO1_3715 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK D APECO1_1767 aec27; putative ATPase with chaperone activity K11907 vasG; type VI secretion system protein VasG D APECO1_3712 putative ATPases with chaperone activity, ATP-binding subunit K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:ecv02020] D APECO1_1610 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APECO1_1611 phoB; positive response regulator for pho regulon K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D APECO1_1625 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO1_2733 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein D APECO1_211 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO1_212 phoP; transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D APECO1_537 putative outer membrane protein of prophage K07804 pagC; putatice virulence related protein PagC D APECO1_3060 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APECO1_3059 ompR; osmolarity response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D APECO1_4344 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C D APECO1_41 ompF; OmpF K09476 ompF; outer membrane pore protein F D APECO1_1001 ompN; Outer membrane protein N precursor K09476 ompF; outer membrane pore protein F D APECO1_2557 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APECO1_2556 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APECO1_3323 yqjB; conserved hypothetical protein K25864 mzrA; modulator protein MzrA D APECO1_692 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APECO1_691 rstA; transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA D APECO1_1824 htrA; periplasmic serine protease Do, heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D APECO1_1980 creC; sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D APECO1_1981 creB; catabolic regulation response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D APECO1_1168 baeS; Sensor protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APECO1_1169 DNA-binding response regulator in two-component regulatory system with BaeS K07664 baeR; two-component system, OmpR family, response regulator BaeR D APECO1_1164 yegM; conserved hypothetical protein K07799 mdtA; membrane fusion protein, multidrug efflux system D APECO1_1165 yegN; conserved hypothetical protein K07788 mdtB; multidrug efflux pump D APECO1_1166 yegO; conserved hypothetical protein K07789 mdtC; multidrug efflux pump D APECO1_1167 yegB; putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D APECO1_4087 acrD; aminoglycoside/multidrug efflux system K18324 acrD; multidrug efflux pump D APECO1_2339 basS; BasS, sensory histidine kinase in two-component regulatory system with BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APECO1_2338 basR; BasR, DNA-binding response regulator in two-component regulatory system with BasS K07771 basR; two-component system, OmpR family, response regulator BasR D APECO1_4308 yfbE; conserved hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D APECO1_1478 cusS; Sensor kinase cusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_O1R109 silS; SilS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_O1R122 pcoS; PcoS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_1477 ylcA; putative 2-component transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_O1R110 silR; SilR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_O1R122.2 pcoR; PcoR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_1476 cusC; probable outer membrane lipoprotein CusC precursor K07796 cusC; outer membrane protein, copper/silver efflux system D APECO1_O1R111 silC; SilC K07796 cusC; outer membrane protein, copper/silver efflux system D APECO1_1475 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D APECO1_O1R112 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D APECO1_1474 cusB; copper/silver efflux system, membrane fusion protein K07798 cusB; membrane fusion protein, copper/silver efflux system D APECO1_O1R113 silB; SilB K07798 cusB; membrane fusion protein, copper/silver efflux system D APECO1_1473 cusA; copper/silver efflux system, membrane component K07787 cusA; copper/silver efflux system protein D APECO1_O1R114 silA; SilA K07787 cusA; copper/silver efflux system protein D APECO1_3395 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APECO1_3396 ygiX; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D APECO1_940 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO1_939 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO1_964 fliC; flagellin K02406 fliC; flagellin D APECO1_963 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D APECO1_938 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO1_1372 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APECO1_1373 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APECO1_1369 kdpA; potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D APECO1_1370 kdpB; potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D APECO1_1371 kdpC; potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit D APECO1_86 torS; sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D APECO1_88 torR; TorCAD operon transcriptional regulatory protein torR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D APECO1_89 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D APECO1_90 torA; trimethylamine-N-oxide reductase 1 precursor K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO1_91 torD; chaperone protein TorD K03533 torD; TorA specific chaperone D APECO1_3225 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APECO1_1978 arcA; global response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D APECO1_2629 conserved membrane protein K07793 tctA; putative tricarboxylic transport membrane protein D APECO1_2628 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D APECO1_2627 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D APECO1_2755 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D APECO1_O1CoBM137 iroN; IroN K19611 fepA; ferric enterobactin receptor D APECO1_1465 fepA; ferrienterobactin receptor precursor K19611 fepA; ferric enterobactin receptor D APECO1_1433 dpiB; sensor kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D APECO1_1432 citB; conserved hypothetical protein K07702 dpiA; two-component system, CitB family, response regulator CitB D APECO1_1434 citC; citrate lyase synthetase (citrate (pro-3S)-lyase ligase) K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D APECO1_1435 citE; citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D APECO1_1436 citF; citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D APECO1_1437 citX; apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61] D APECO1_1438 citG; triphosphoribosyl-dephospho-CoA transferase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D APECO1_1439 ybdS; citrate carrier/transporter K09477 citT; citrate:succinate antiporter D APECO1_2327 yjdH; sensor protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APECO1_2328 yjdG; transcriptional regulatory protein DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D APECO1_2329 dcuB; anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D APECO1_615 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D APECO1_339 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APECO1_338 narL; nitrate/nitrite response regulator protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D APECO1_4088 narQ; sensory histidine kinase in two-component regulatory system with NarP (NarL) K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APECO1_4365 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D APECO1_341 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO1_605 narZ; respiratory nitrate reductase 2 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO1_342 narH; nitrate reductase 1, beta (Fe-S) subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO1_604 narY; cryptic nitrate reductase 2, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO1_344 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO1_602 narV; respiratory nitrate reductase 2 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO1_343 narJ; nitrate reductase 1 delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D APECO1_603 narW; cryptic nitrate reductase 2 delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D APECO1_609 fdnG; FdnG, alpha subunit of formate dehydrogenase-N K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APECO1_611 fdnI; formate dehydrogenase-N gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit D APECO1_2235 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APECO1_2236 frdB; iron-sulfur protein subunit of fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APECO1_2237 frdC; fumarate reductase, anaerobic, membrane anchor polypeptide K00246 frdC; succinate dehydrogenase subunit C D APECO1_2238 frdD; fumarate reductase, anaerobic, membrane anchor polypeptide K00247 frdD; succinate dehydrogenase subunit D D APECO1_2785 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D APECO1_2784 uhpB; UhpB, sensory histidine kinase in two-component regulatory sytem with UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D APECO1_2783 uhpA; response regulator for uhpBA two component regulatory system K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA D APECO1_2786 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D APECO1_1791 rcsF; putative outer membrane protein, signal K06080 rcsF; RcsF protein D APECO1_4341 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and RojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APECO1_4343 yojN; putative sensor-like histidine kinase YojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APECO1_990 rcsA; positive regulator for ctr capsule biosynthesis, positive transcription factor K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APECO1_4342 rcsB; DNA-binding response regulator in two-component regulatory system with RcsC and YojN K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APECO1_3745 barA; BarA, sensory histidine kinase; two-component regulator with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D APECO1_956 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D APECO1_957 sdiA; DNA-binding transcriptional activator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APECO1_4166 evgS; sensor protein EvgS precursor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D APECO1_4167 evgA; DNA-binding response regulator in two-component regulatory system with EvgS K07690 evgA; two-component system, NarL family, response regulator EvgA D APECO1_4168 emrK; EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein K07797 emrK; multidrug resistance protein K D APECO1_4169 emrY; multidrug resistance protein Y K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein D APECO1_2239 ampC; beta-lactamase precursor K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D APECO1_2114 fimC; type I fimbrial chaperone K07346 fimC; fimbrial chaperone protein D APECO1_633 chaperone protein fimC precursor K07346 fimC; fimbrial chaperone protein D APECO1_3031 fimbrial chaperone protein precursor K07346 fimC; fimbrial chaperone protein D APECO1_632 outer membrane usher protein FimD precursor K07347 fimD; outer membrane usher protein D APECO1_2113 fimD; outer membrane usher protein FimD precursor K07347 fimD; outer membrane usher protein D APECO1_1846 htrE; outer membrane usher protein HtrE precursor K07347 fimD; outer membrane usher protein D APECO1_3032 aufC; outer membrane usher protein precursor AufC K07347 fimD; outer membrane usher protein D APECO1_4437 yehB; putative outer membrane usher protein YehB precursor K07347 fimD; outer membrane usher protein D APECO1_1820 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D APECO1_3978 glnB; regulatory protein P-II for glutamine synthetase K04751 glnB; nitrogen regulatory protein P-II 1 D APECO1_2593 glnL; GlnL, sensory histidine kinase in two-component regulatory system with GlnG K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APECO1_2594 glnG; fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D APECO1_2592 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO1_2472 zraS; ZraS, sensory histidine kinase in two-component regulatory system with ZraR K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D APECO1_2471 zraR; ZraR, fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein K07713 zraR; two-component system, NtrC family, response regulator HydG D APECO1_2473 zraP; periplasmic zinc resistance-associated protein precursor ZraP K07803 zraP; zinc resistance-associated protein D APECO1_4340 atoS; sensor protein AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D APECO1_4339 atoC; fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein K07714 atoC; two-component system, NtrC family, response regulator AtoC D APECO1_4338 atoD; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D APECO1_4337 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D APECO1_4336 atoE; short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_3509 pgtC; phosphoglycerate transport regulatory protein K08478 pgtC; phosphoglycerate transport regulatory protein PgtC D APECO1_3508 pgtB; putative regulatory protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3] D APECO1_3507 pgtA; phosphoglycerate activator protein K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA D APECO1_3510 pgtP; phosphoglycerate transporter protein PgtP K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein D APECO1_2402 putative transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D APECO1_2403 two component response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D APECO1_2920 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D APECO1_3233 rpoN; DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor D APECO1_3975 yfhK; putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APECO1_3977 yfhA; putative DNA-binding response regulator in two-component system K07715 glrR; two-component system, NtrC family, response regulator GlrR D APECO1_3425 hybO; hydrogenase 2, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D APECO1_76 hyaA; hydrogenase 1, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D APECO1_77 hyaB; hydrogenase-1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D APECO1_3428 hybC; hydrogenase 2, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D APECO1_78 hyaC; hydrogenase 1, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D APECO1_933 cheR; chemotaxis regulator, protein-glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APECO1_2072 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APECO1_934 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APECO1_3344 aer; aerotaxis sensor receptor, flavoprotein K03776 aer; aerotaxis receptor D APECO1_935 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D APECO1_936 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APECO1_931 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APECO1_932 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APECO1_1411 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APECO1_1410 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein D APECO1_1409 gltJ; glutamate and aspartate transporter subunit K10003 gltJ; glutamate/aspartate transport system permease protein D APECO1_1408 ybeJ; Glutamate/aspartate Periplasmic binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APECO1_3098 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APECO1_644 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D APECO1_1527 ybaS; putative glutaminase YbaS K01425 glsA; glutaminase [EC:3.5.1.2] D APECO1_2301 conserved hypothetical protein K07720 yesN; two-component system, response regulator YesN D APECO1_1348 cydA; cytochrome d terminal oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APECO1_82 appC; cytochrome bd-II oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APECO1_83 appB; cytochrome bd-II oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APECO1_3378 tolC; TolC outer membrane-associated protein K12340 tolC; outer membrane protein D APECO1_1152 wza; putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D APECO1_1151 wzb; tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D APECO1_1150 wzc; protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO1_26882 rffE; UDP-N-acetyl glucosamine-2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APECO1_2688 rffD; UDP-N-acetyl glucosamine-2-epimerase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D APECO1_1317 ybhC; putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D APECO1_153 flgM; FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D APECO1_3536 speC; ornithine decarboxylase, constitutive K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APECO1_1374 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ecv02024] D APECO1_3834 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D APECO1_2219 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D APECO1_425 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D APECO1_3932 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO1_780 aroH; 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO1_1334 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO1_O1CoBM134 conserved hypothetical protein K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APECO1_3395 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APECO1_3396 ygiX; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D APECO1_3975 yfhK; putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APECO1_3977 yfhA; putative DNA-binding response regulator in two-component system K07715 glrR; two-component system, NtrC family, response regulator GlrR D APECO1_940 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO1_939 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO1_1373 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APECO1_957 sdiA; DNA-binding transcriptional activator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APECO1_2931 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_621 gadA; glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D APECO1_620 xasA; amino acid antiporter K20265 gadC; glutamate:GABA antiporter D APECO1_582 ydcS; putative ABC transporter periplasmic binding protein YdcS precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D APECO1_585 putative transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D APECO1_584 ydcU; hypothetical ABC transporter permease protein YdcU K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D APECO1_583 ydcT; hypothetical ABC transporter ATP-binding protein YdcT K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D APECO1_3001 livK; leucine transporter subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO1_2999 livJ; Leu/Ile/Val-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO1_3002 livH; high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D APECO1_3003 livM; leucine/isoleucine/valine transporter subunit LivM K01998 livM; branched-chain amino acid transport system permease protein D APECO1_3004 livG; LivG, ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein D APECO1_3005 livF; ATP-binding component of leucine transport LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D APECO1_990 rcsA; positive regulator for ctr capsule biosynthesis, positive transcription factor K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APECO1_444 yciR; conserved hypothetical protein K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D APECO1_863 fadD; long chain fatty acid CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D APECO1_3098 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APECO1_2424 yjbK; putative zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D APECO1_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APECO1_1596 ribD; bifunctional pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D APECO1_588 ydcZ; conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APECO1_1078 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APECO1_451 putative outer membrane channel protein K18139 oprM; outer membrane protein, multidrug efflux system D APECO1_483 mppA; periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D APECO1_358 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D APECO1_359 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein D APECO1_360 oppC; oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein D APECO1_361 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D APECO1_362 oppF; oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D APECO1_3399 ygiS; putative transporter subunit, periplasmic-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APECO1_2373 putative ABC transporter, periplasmic oligo-dipeptide/nickel binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APECO1_2374 yddR; putative ABC transporter permease protein YddR K02033 ABC.PE.P; peptide/nickel transport system permease protein D APECO1_2375 yddQ; putative ABC transporter permease protein YddQ K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APECO1_2376 yddP; putative ABC transporter transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APECO1_2377 yddO; putative ABC transporter ATP-binding protein YddO K02032 ddpF; peptide/nickel transport system ATP-binding protein D APECO1_2754 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO1_2491 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D APECO1_3257 secG; putative export membrane protein K03075 secG; preprotein translocase subunit SecG D APECO1_3148 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY D APECO1_1603 yajC; conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D APECO1_1888 secA; translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APECO1_2989 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D APECO1_2846 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D APECO1_3923 ffh; signal recognition particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli [PATH:ecv02026] D APECO1_4128 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO1_2672 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D APECO1_3098 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APECO1_940 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO1_939 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO1_153 flgM; FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D APECO1_963 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D APECO1_962 fliZ; conserved hypothetical protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D APECO1_1840 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D APECO1_3782 rpoS; sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D APECO1_1158 yegE; putative sensor-type protein K21084 yegE; diguanylate cyclase [EC:2.7.7.65] D APECO1_994 yedQ; conserved hypothetical protein K21085 yedQ; diguanylate cyclase [EC:2.7.7.65] D APECO1_2923 yhjJ; conserved hypothetical protein K21086 pdeH; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_306 conserved hypothetical protein K21087 ycgR; flagellar brake protein D APECO1_493 ydaM; conserved hypothetical protein K21088 ydaM; diguanylate cyclase [EC:2.7.7.65] D APECO1_444 yciR; conserved hypothetical protein K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D APECO1_4422 yehV; MerR-like regulator A K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D APECO1_125 csgD; probable csgAB operon transcriptional regulatory protein K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D APECO1_126 csgB; minor curlin subunit precursor CsgB K04335 csgB; minor curlin subunit D APECO1_127 csgA; curlin major subunit CsgA K04334 csgA; major curlin subunit D APECO1_128 csgC; putative curli production protein CsgC K04336 csgC; curli production protein D APECO1_1623 conserved hypothetical protein K18968 adrA; diguanylate cyclase [EC:2.7.7.65] D APECO1_872 yoaD; conserved hypothetical protein K21090 adrB; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_29152 bcsA; putative ATPases involved in chromosome partitioning K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D APECO1_3834 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D APECO1_1152 wza; putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D APECO1_957 sdiA; DNA-binding transcriptional activator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APECO1_3745 barA; BarA, sensory histidine kinase; two-component regulator with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D APECO1_956 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D APECO1_3027 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D APECO1_3028 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D APECO1_3029 glgP; glycogen phosphorylase GlgP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APECO1_3049 malP; maltodextrin phosphorylase MalP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APECO1_115 ycdS; predicted outer membrane protein K11935 pgaA; biofilm PGA synthesis protein PgaA D APECO1_114 ycdR; predicted enzyme associated with biofilm formation K11931 pgaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-] D APECO1_113 ycdQ; predicted glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D APECO1_112 ycdP; predicted inner membrane protein K11937 pgaD; biofilm PGA synthesis protein PgaD D APECO1_2504 oxyR; hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D APECO1_3225 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APECO1_1978 arcA; global response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D APECO1_4341 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and RojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APECO1_4343 yojN; putative sensor-like histidine kinase YojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APECO1_4342 rcsB; DNA-binding response regulator in two-component regulatory system with RcsC and YojN K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APECO1_990 rcsA; positive regulator for ctr capsule biosynthesis, positive transcription factor K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APECO1_3723 gcvA; positive regulator of gcv operon K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APECO1_4078 gcvR; DNA-binding transcriptional repressor, regulatory protein accessory to GcvA K03567 gcvR; glycine cleavage system transcriptional repressor D APECO1_3060 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APECO1_3059 ompR; osmolarity response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ecv02030] D APECO1_2072 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APECO1_934 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APECO1_3344 aer; aerotaxis sensor receptor, flavoprotein K03776 aer; aerotaxis receptor D APECO1_2434 malE; periplasmic maltose-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APECO1_2712 rbsB; D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein D APECO1_3185 putative ribose ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D APECO1_4401 mglB; methyl-galactoside transporter subunit MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D APECO1_2904 dppA; dipeptide transporter protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D APECO1_936 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APECO1_935 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D APECO1_931 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APECO1_930 cheZ; chemotaxis regulator, protein phosphatase for CheY K03414 cheZ; chemotaxis protein CheZ D APECO1_932 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APECO1_933 cheR; chemotaxis regulator, protein-glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APECO1_978 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APECO1_984 fliM; Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D APECO1_985 fliN; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D APECO1_938 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO1_937 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D APECO1_1739 mbhA; putative motility protein MbhA K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ecv02040] D APECO1_976 fliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE D APECO1_977 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D APECO1_978 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APECO1_979 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH D APECO1_980 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APECO1_981 fliJ; flagellar FliJ protein K02413 fliJ; flagellar protein FliJ D APECO1_982 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D APECO1_983 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL D APECO1_984 fliM; Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D APECO1_985 fliN; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D APECO1_986 fliO; flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ D APECO1_987 fliP; flagellar assembly protein FliP K02419 fliP; flagellar biosynthesis protein FliP D APECO1_988 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APECO1_989 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APECO1_927 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE D APECO1_1740 fhiA; FhiA protein K02400 flhA; flagellar biosynthesis protein FlhA D APECO1_928 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO1_929 flhB; flagellar biosynthesis protein B K02401 flhB; flagellar biosynthesis protein FlhB D APECO1_154 flgA; FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D APECO1_155 flgB; cell-proximal portion of basal-body rod FlgB K02387 flgB; flagellar basal-body rod protein FlgB D APECO1_156 flgC; flagellar component of cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC D APECO1_157 flgD; flagellar hook formation protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D APECO1_158 flgE; flagellar biosynthesis, hook protein FlgE K02390 flgE; flagellar hook protein FlgE D APECO1_159 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D APECO1_160 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D APECO1_161 flgH; flagellar basal body L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH D APECO1_162 flgI; flagella basal body P-ring-like protein FlgI K02394 flgI; flagellar P-ring protein FlgI D APECO1_163 flgJ; peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D APECO1_164 flgK; hook-filament junction protein FlgK K02396 flgK; flagellar hook-associated protein 1 D APECO1_165 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D APECO1_964 fliC; flagellin K02406 fliC; flagellin D APECO1_965 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D APECO1_966 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D APECO1_967 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT D APECO1_938 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO1_937 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D APECO1_1739 mbhA; putative motility protein MbhA K02557 motB; chemotaxis protein MotB D APECO1_153 flgM; FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D APECO1_152 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D APECO1_961 fliY; cystine-binding periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein D APECO1_962 fliZ; conserved hypothetical protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D APECO1_3348 rpoD; RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures K03086 rpoD; RNA polymerase primary sigma factor D APECO1_940 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO1_939 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO1_3233 rpoN; DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor D APECO1_963 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D APECO1_3751 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:ecv04980] D APECO1_3613 conserved hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D APECO1_2458 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ecv01501] D APECO1_41 ompF; OmpF K09476 ompF; outer membrane pore protein F D APECO1_1001 ompN; Outer membrane protein N precursor K09476 ompF; outer membrane pore protein F D APECO1_4344 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C D APECO1_1578 ampG; AmpG muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D APECO1_188 nagZ; beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D APECO1_2239 ampC; beta-lactamase precursor K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D APECO1_483 mppA; periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D APECO1_358 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D APECO1_359 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein D APECO1_360 oppC; oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein D APECO1_361 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D APECO1_362 oppF; oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D APECO1_1734 conserved hypothetical protein K18148 rtcB; release factor H-coupled RctB family protein D APECO1_449 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_1551 acrA; acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_1552 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump D APECO1_450 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D APECO1_451 putative outer membrane channel protein K18139 oprM; outer membrane protein, multidrug efflux system D APECO1_3378 tolC; TolC outer membrane-associated protein K12340 tolC; outer membrane protein D APECO1_3068 mrcA; peptidoglycan synthetase; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APECO1_1420 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APECO1_1902 ftsI; peptidoglycan synthetase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ecv01502] D APECO1_1894 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO1_1627 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO1_302 dadX; alanine racemase 2, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D APECO1_2414 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1] D APECO1_1900 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D APECO1_1899 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APECO1_1896 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ecv01503] D APECO1_211 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO1_212 phoP; transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D APECO1_2902 yhjW; predicted metal dependent hydrolase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APECO1_1430 crcA; CrcA protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APECO1_4308 yfbE; conserved hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D APECO1_4307 yfbF; putative glycosyltransferase YfbF K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D APECO1_4306 yfbG; putative nucleoside-diphosphate-sugar epimerase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D APECO1_4305 yfbH; conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D APECO1_4304 yfbI; putative 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D APECO1_4303 yfbJ; conserved hypothetical protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D APECO1_4302 pmrD; polymyxin B resistance protein PmrD K19238 pmrD; signal transduction protein PmrD D APECO1_2339 basS; BasS, sensory histidine kinase in two-component regulatory system with BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APECO1_2338 basR; BasR, DNA-binding response regulator in two-component regulatory system with BasS K07771 basR; two-component system, OmpR family, response regulator BasR D APECO1_2337 yjdB; conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APECO1_457 sapA; peptide transport periplasmic protein SapA precursor K19226 sapA; cationic peptide transport system substrate-binding protein D APECO1_456 sapB; peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein D APECO1_455 sapC; ABC-type antimicrobial peptide transport system, permease component K19228 sapC; cationic peptide transport system permease protein D APECO1_454 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein D APECO1_453 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein D APECO1_1795 cutF; copper homeostasis protein CutF precursor K06079 cutF; copper homeostasis protein (lipoprotein) D APECO1_2557 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APECO1_2556 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APECO1_4113 amiA; putative N-acetylmuramoyl-L-alanine amidase AmiA precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_2222 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_3688 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_194 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS D APECO1_1824 htrA; periplasmic serine protease Do, heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D APECO1_2601 dsbA; DsbA, periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D APECO1_3093 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APECO1_649 marA; Multiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO1_449 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_1551 acrA; acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_1552 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump D APECO1_450 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D APECO1_3378 tolC; TolC outer membrane-associated protein K12340 tolC; outer membrane protein D APECO1_1806 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ecv01000] C 01001 Protein kinases [BR:ecv01001] D APECO1_637 hipA; regulator with HipB K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APECO1_2188 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APECO1_O1R79 putative capsule biosynthesis protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APECO1_1150 wzc; protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO1_1610 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APECO1_211 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO1_3060 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APECO1_692 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APECO1_2557 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APECO1_1980 creC; sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D APECO1_1168 baeS; Sensor protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APECO1_2339 basS; BasS, sensory histidine kinase in two-component regulatory system with BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APECO1_1478 cusS; Sensor kinase cusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_O1R109 silS; SilS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_O1R122 pcoS; PcoS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_3395 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APECO1_1372 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APECO1_86 torS; sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D APECO1_3225 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APECO1_1003 yedV; putative 2-component sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D APECO1_339 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APECO1_4088 narQ; sensory histidine kinase in two-component regulatory system with NarP (NarL) K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APECO1_2784 uhpB; UhpB, sensory histidine kinase in two-component regulatory sytem with UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D APECO1_4343 yojN; putative sensor-like histidine kinase YojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APECO1_4341 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and RojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APECO1_3745 barA; BarA, sensory histidine kinase; two-component regulator with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D APECO1_4166 evgS; sensor protein EvgS precursor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D APECO1_1433 dpiB; sensor kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D APECO1_2327 yjdH; sensor protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APECO1_4157 ypdA; YpdA, sensory kinase in two-component system with YpdB K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APECO1_4423 yehU; putative sensory kinase in two-component system with YehT K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APECO1_2300 putative histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APECO1_2593 glnL; GlnL, sensory histidine kinase in two-component regulatory system with GlnG K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APECO1_2472 zraS; ZraS, sensory histidine kinase in two-component regulatory system with ZraR K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D APECO1_4340 atoS; sensor protein AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D APECO1_3975 yfhK; putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APECO1_3508 pgtB; putative regulatory protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3] D APECO1_2402 putative transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D APECO1_936 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ecv01009] D APECO1_2553 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO1_1542 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D APECO1_1993 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ecv01002] D APECO1_1956 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D APECO1_3455 pppA; putative prepilin peptidase A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D APECO1_3117 hofD; type 4 prepilin-like proteins leader peptide processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APECO1_1482 ompT; outer membrane protein 3b (a), protease VII K01355 ompT; omptin [EC:3.4.23.49] D APECO1_546 outer membrane protease K01355 ompT; omptin [EC:3.4.23.49] D APECO1_79 hyaD; hydrogenase 1 maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D APECO1_3429 hybD; putative maturation element for hydrogenase 2 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D APECO1_3808 hycI; hydrogenase 3 maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D APECO1_4019 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D APECO1_4379 spr; putative peptidase, outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D APECO1_1742 yafL; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D APECO1_783 nlpC; putative lipoprotein K13695 nlpC; probable lipoprotein NlpC D APECO1_4252 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D APECO1_32232 gltB; glutamate synthase small subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APECO1_2732 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APECO1_1398 asnB; glutamine-hydrolyzing asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D APECO1_1002 hchA; heat shock protein (Hsp) 31, subunit of Hsp31 homodimer K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D APECO1_3277 conserved hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124] D APECO1_2292 putative peptidase K05520 yhbO; deglycase [EC:3.5.1.124] D APECO1_1587 thiJ; 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis K03152 thiJ; protein deglycase [EC:3.5.1.124] D APECO1_6023 erfK; conserved protein with NAD(P)-binding Rossmann-fold domain K16291 erfK; L,D-transpeptidase ErfK/SrfK D APECO1_755 ynhG; conserved hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG D APECO1_1273 ybiS; conserved hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS D APECO1_194 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS D APECO1_37 ycbB; YcbB K21470 ycbB; L,D-transpeptidase YcbB D APECO1_44 pepN; PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2] D APECO1_2955 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D APECO1_659 dcp; putative oxidoreductase YdfG K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D APECO1_3684 ptrA; protease III precursor K01407 ptrA; protease III [EC:3.4.24.55] D APECO1_622 pqqL; probable zinc protease PqqL K07263 pqqL; zinc protease [EC:3.4.24.-] D APECO1_2134 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D APECO1_4001 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D APECO1_4085 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D APECO1_209 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D APECO1_1732 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D APECO1_2502 putative hippuricase K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D APECO1_1499 allC; N-carbamoyl-L-amino acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D APECO1_906 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D APECO1_1819 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D APECO1_2610 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D APECO1_3620 pepB; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D APECO1_4152 ypdF; putative peptidase YpdF K08326 ypdF; aminopeptidase [EC:3.4.11.-] D APECO1_3771 iap; alkaline phosphatase isozyme conversion protein Iap precursor K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D APECO1_2090 iadA; isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D APECO1_3254 hflB; putative ATP-dependent zinc metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D APECO1_884 htpX; heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D APECO1_3593 yggG; putative metalloprotease YggG K07387 K07387; metalloprotease [EC:3.4.24.-] D APECO1_21 ycaL; YcaL K07387 K07387; metalloprotease [EC:3.4.24.-] D APECO1_4075 yfgC; putative peptidase YfgC K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D APECO1_1811 yaeL; zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D APECO1_4236 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D APECO1_1050 conserved hypothetical protein K09933 mtfA; MtfA peptidase D APECO1_681 ydgD; putative protease K04775 ydgD; protease YdgD [EC:3.4.21.-] D APECO1_1824 htrA; periplasmic serine protease Do, heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D APECO1_3210 degQ; periplasmic serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D APECO1_3209 degS; periplasmic serine endoprotease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D APECO1_896 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D APECO1_1423 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_1254 dacC; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_1108 dacD; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_4415 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D APECO1_1632 ampH; penicillin-binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D APECO1_3250 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D APECO1_1574 clpP; ATP-dependent proteolytic subunit of ClpA-ClpP serine protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D APECO1_4214 hypothetical protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D APECO1_1572 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D APECO1_60 ycbZ; YcbZ K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D APECO1_2426 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO1_2039 conserved hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO1_3879 conserved hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO1_295 umuD; mutagenesis and repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D APECO1_O1R135 mucA; UV protection and repair protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D APECO1_3963 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89] D APECO1_885 prc; tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D APECO1_835 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-] D APECO1_O1R156 conserved hypothetical protein K04773 sppA; protease IV [EC:3.4.21.-] D APECO1_432 sohB; possible protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D APECO1_2454 pepE; peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D APECO1_3043 glpG; putative intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D APECO1_304 ldcA; muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D APECO1_1023 putative phage capsid protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D APECO1_3892 pro-head protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D APECO1_2538 hslV; ATP-dependent hslVU protease peptidase subunit hslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D APECO1_1265 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APECO1_3012 ggt; gamma-glutamyltranspeptidase precursor Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APECO1_1176 yegQ; conserved hypothetical protein K08303 prtC; U32 family peptidase [EC:3.4.-.-] D APECO1_580 ydcP; putative protease YdcP precursor K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D APECO1_3271 yhbV; putative protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D APECO1_3272 yhbU; putative collagenase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D APECO1_2157 pmbA; putative peptide maturation protein PmbA K03592 pmbA; PmbA protein D APECO1_3200 tldD; suppresses inhibitory activity of CsrA K03568 tldD; TldD protein D APECO1_4332 yfaS; conserved hypothetical protein K06894 yfhM; alpha-2-macroglobulin D APECO1_4004 yfhM; putative lipoprotein YfhM K06894 yfhM; alpha-2-macroglobulin D APECO1_2216 hflC; protease specific for phage lambda cII repressor K04087 hflC; modulator of FtsH protease HflC D APECO1_2217 hflK; HflK protein, regulator of FtsH protease, subunit of HflK-HflC complex K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:ecv01003] D APECO1_3476 neuS; poly-alpha-2,8 sialosyl sialyltransferase NeuS K12246 neuS; poly-alpha-2,8 sialosyl sialyltransferase [EC:2.4.-.-] D APECO1_3028 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D APECO1_29152 bcsA; putative ATPases involved in chromosome partitioning K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D APECO1_3227 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D APECO1_4005 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APECO1_1836 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APECO1_3068 mrcA; peptidoglycan synthetase; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APECO1_1145 wcaE; Putative colanic acid biosynthesis glycosyl transferase K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D APECO1_1147 wcaC; putative glycosyltransferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D APECO1_2680 wecG; putative UDP-N-acetyl-D-mannosaminuronic acid transferase WecG K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D APECO1_2682 rffT; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D APECO1_2690 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D APECO1_134 modH; periplasmic glucans biosynthesis protein MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D APECO1_113 ycdQ; predicted glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D APECO1_942 otsA; trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D APECO1_1134 wcaL; putative colanic acid biosynthesis glycosyl transferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ecv01005] D APECO1_1806 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D APECO1_1805 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D APECO1_1890 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D APECO1_1808 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D APECO1_1490 ybbF; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D APECO1_27 lpxK; LpxK K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D APECO1_137 htrB; HtrB K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D APECO1_905 msbB; myristoyl acyltransferase; (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D APECO1_4159 ddg; lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D APECO1_4380 yeiU; undecaprenyl pyrophosphate phosphatase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D APECO1_2825 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D APECO1_4304 yfbI; putative 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D APECO1_1430 crcA; CrcA protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APECO1_2337 yjdB; conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APECO1_2902 yhjW; predicted metal dependent hydrolase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APECO1_332 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D APECO1_30 kdsB; KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D APECO1_3479 kpsU; 3-deoxy-manno-octulosonate cytidylyltransferase KpsU K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D APECO1_3237 yrbI; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D APECO1_3238 kdsD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APECO1_3482 kpsF; polysialic acid capsule synthesis protein KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APECO1_3692 phosphosugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APECO1_2835 rfaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D APECO1_2836 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D APECO1_2827 rfaG; lipopolysaccharide core biosynthesis glucosyltransferase I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APECO1_2840 yibD; predicted glycosyl transferase YibD K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D APECO1_2834 waaL; lipid A-core, surface polymer ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D APECO1_2829 rafI; lipopolysaccharide 1,3-galactosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APECO1_2828 rfaP; lipopolysaccharide core biosynthesis protein RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D APECO1_2826 rfaQ; lipopolysaccharide core biosynthesis glycosyl transferase RfaQ K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D APECO1_2830 rfaJ; lipopolysaccharide 1,2-glucosyltransferase K03276 waaR; UDP-glucose/galactose:(glucosyl)LPS alpha-1,2-glucosyl/galactosyltransferase [EC:2.4.1.-] D APECO1_2833 waaV; beta-1,3-glucosyltransferase K12983 waaV; UDP-glucose:(glucosyl)LPS beta-1,3-glucosyltransferase [EC:2.4.1.-] D APECO1_2832 rfaJ; UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase K12985 waaW; (galactosyl)LPS 1,2-glucosyltransferase [EC:2.4.1.-] D APECO1_2831 lipopolysaccharide core biosynthesis protein RfaY K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-] D APECO1_2512 yjjP; conserved hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D APECO1_1745 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D APECO1_1787 yaeD; conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D APECO1_3362 rfaE; fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D APECO1_2837 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D APECO1_2681 wecF; putative enterobacterial common antigen polymerase WecF K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D APECO1_1124 cld; regulator of length of O-antigen component of lipopolysaccharide chains K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D APECO1_2690 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ecv01011] D APECO1_3245 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APECO1_2495 murB; MurB, UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APECO1_1895 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D APECO1_1898 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APECO1_1901 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APECO1_1894 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO1_1627 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APECO1_302 dadX; alanine racemase 2, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D APECO1_2414 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1] D APECO1_2496 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3] D APECO1_304 ldcA; muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D APECO1_1899 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APECO1_1896 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D APECO1_3357 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO1_1252 ybjG; undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APECO1_151 mviN; MviN K03980 murJ; putative peptidoglycan lipid II flippase D APECO1_3068 mrcA; peptidoglycan synthetase; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APECO1_1836 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APECO1_4005 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APECO1_1420 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APECO1_1902 ftsI; peptidoglycan synthetase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APECO1_1423 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_1254 dacC; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_1108 dacD; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APECO1_3250 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D APECO1_1632 ampH; penicillin-binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D APECO1_4415 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D APECO1_3227 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D APECO1_6023 erfK; conserved protein with NAD(P)-binding Rossmann-fold domain K16291 erfK; L,D-transpeptidase ErfK/SrfK D APECO1_755 ynhG; conserved hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG D APECO1_1273 ybiS; conserved hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS D APECO1_194 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS D APECO1_37 ycbB; YcbB K21470 ycbB; L,D-transpeptidase YcbB D APECO1_4236 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D APECO1_1742 yafL; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D APECO1_4379 spr; putative peptidase, outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D APECO1_906 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D APECO1_1987 slt; lytic murein transglycosylase, soluble K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D APECO1_3719 mltA; membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D APECO1_3825 mltB; membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D APECO1_3538 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D APECO1_1779 mltD; putative membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D APECO1_305 mltE; murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D APECO1_3973 yfhD; putative transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D APECO1_178 yceG; putative thymidylate kinase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D APECO1_1422 rlpA; rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D APECO1_4113 amiA; putative N-acetylmuramoyl-L-alanine amidase AmiA precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_2222 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_3688 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_1226 ybjR; putative N-acetylmuramoyl-L-alanine amidase YbjR K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_1879 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_3411 yqhH; putative outer membrane lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:ecv01004] D APECO1_173 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APECO1_172 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D APECO1_4241 fabB; 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APECO1_176 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APECO1_174 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APECO1_59 fabA; FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D APECO1_1807 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APECO1_447 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APECO1_1515 tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D APECO1_1559 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D APECO1_369 conserved hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D APECO1_1568 ybaW; conserved hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-] D APECO1_1059 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D APECO1_1058 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D APECO1_2386 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APECO1_1654 prpE; putative propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D APECO1_777 ydiD; short chain acyl-CoA synthetase, anaerobic K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-] D APECO1_863 fadD; long chain fatty acid CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D APECO1_3445 putative saframycin Mx1 synthetase B K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D APECO1_2428 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APECO1_171 pslX; Fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D APECO1_3355 ygiH; conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APECO1_3401 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ecv01008] D APECO1_1454 entB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D APECO1_1466 entD; 4'-phosphopantetheinyl transferase EntD K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D APECO1_1455 entE; 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D APECO1_1463 entF; enterobactin synthase multienzyme complex component, ATP-dependent K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D APECO1_1452 conserved hypothetical protein K24147 entH; proofreading thioesterase EntH D APECO1_1059 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D APECO1_1058 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D APECO1_1062 ybtE; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D APECO1_1060 ybtU; yersiniabactin biosynthetic protein K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component D APECO1_1061 ybtT; yersiniabactin biosynthetic protein YbtT K05374 irp4; yersiniabactin synthetase, thioesterase component C 01006 Prenyltransferases [BR:ecv01006] D APECO1_1589 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D APECO1_3247 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D APECO1_1813 conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D APECO1_2220 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D APECO1_2540 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D APECO1_2429 ubiA; 4-hydroxybenzoate-octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D APECO1_1583 cyoE; cytochrome o ubiquinol oxidase C subunit K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:ecv01007] D APECO1_4141 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO1_1384 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APECO1_1841 yadB; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D APECO1_720 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APECO1_3079 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D APECO1_1488 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APECO1_926 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APECO1_4433 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APECO1_1957 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APECO1_2136 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APECO1_14132 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APECO1_2324 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO1_3637 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO1_916 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APECO1_42 asnS; AsnS K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APECO1_4010 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APECO1_2890 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APECO1_2891 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APECO1_1196 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APECO1_1793 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APECO1_791 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APECO1_3829 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APECO1_788 pheS; phenylalanine tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APECO1_787 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APECO1_40 aspC; AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APECO1_2878 avtA; valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D APECO1_4274 yfbQ; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APECO1_4158 putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D APECO1_2411 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APECO1_1449 ybdL; putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D APECO1_1118 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APECO1_2838 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D APECO1_3443 conserved hypothetical protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APECO1_1313 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APECO1_705 malY; bifunctional beta-cystathionase, PLP-dependent/regulator of maltose regulon K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO1_3691 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APECO1_3096 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APECO1_817 cstC; succinylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D APECO1_3858 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APECO1_3343 ygjG; putative ornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APECO1_1315 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D APECO1_1831 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D APECO1_2701 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APECO1_19 serC; SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APECO1_4308 yfbE; conserved hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D APECO1_2684 rffA; TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ecv00194] D APECO1_2729 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D APECO1_2728 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D APECO1_2725 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APECO1_2724 atpI; ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ecv03000] D APECO1_998 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_O1R127 cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_1920 araC; transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D APECO1_2562 rhaR; DNA-binding transcriptional activator, L-rhamnose-binding K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D APECO1_2563 rhaS; DNA-binding transcriptional activator, L-rhamnose-binding protein RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D APECO1_804 celD; CelD transcriptional regulator K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon D APECO1_2335 adiY; putative regulatory protein AdiY K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA D APECO1_4111 yfeG; ethanolamine operon regulatory protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D APECO1_1057 putative AraC type regulator K05372 ybtA; AraC family transcriptional regulator D APECO1_649 marA; Multiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO1_1983 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO1_1689 ykgD; putative DNA-binding transcriptional regulator K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon D APECO1_2933 yhiW; DNA-binding transcriptional activator YhiW K21906 gadW; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator D APECO1_2932 gadX; DNA-binding transcriptional dual regulator GadX K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator D APECO1_2333 melR; MelR regulator of melibiose operon K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein D APECO1_856 yeaM; putative transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT D APECO1_4346 ada; Ada transcriptional dual regulator / O-6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D APECO1_3723 gcvA; positive regulator of gcv operon K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APECO1_2698 ilvY; transcriptional activator protein IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D APECO1_2648 metR; DNA-binding transcriptional activator, homocysteine-binding K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D APECO1_1959 nhaR; DNA-binding transcriptional activator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D APECO1_2504 oxyR; hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D APECO1_3614 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D APECO1_1908 leuO; leucine transcriptional activator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D APECO1_3306 tdcA; transcriptional activator of tdc operon K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator D APECO1_1510 ybbS; putative transcriptional regulator YbbS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon D APECO1_435 conserved hypothetical protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D APECO1_6021 cbl; DNA-binding transcriptional activator of cysteine biosynthesis K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D APECO1_4172 dsdC; D-serine deaminase activator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator D APECO1_6022 nac; DNA-binding transcriptional dual regulator of nitrogen assimilation K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D APECO1_2091 yjiE; putative DNA-binding transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D APECO1_3201 aaeR; putative DNA-binding transcriptional regulator, efflux system K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D APECO1_3354 putative transcriptional regulator YgiP K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon D APECO1_2706 hdfR; transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D APECO1_482 ycjZ; hypothetical transcriptional regulator YcjZ K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling D APECO1_1253 deoR; DeoR transcriptional repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D APECO1_3044 glpR; glycerol-3-phosphate regulon repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D APECO1_4455 gatR; galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor D APECO1_3298 agaR; DNA-binding transcriptional dual regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D APECO1_3726 fucR; L-fucose operon activator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D APECO1_3819 srlR; DNA-binding transcriptional repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D APECO1_2201 yjfQ; putative DEOR-type transcriptional regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor D APECO1_2590 putative bacterial regulatory protein K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor D APECO1_1648 lacI; lac operon repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D APECO1_2881 xylR; DNA-binding transcriptional activator, xylose-binding K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO1_4400 galS; Mgl repressor and galactose ultrainduction factor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO1_3669 galR; galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO1_2710 rbsR; DNA-binding transcriptional repressor of ribose metabolism K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO1_2416 putative transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APECO1_2536 cytR; transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D APECO1_1905 fruR; transcriptional repressor of fru operon K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D APECO1_2151 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D APECO1_3812 ascG; ascBF operon repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor D APECO1_738 purR; purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D APECO1_3020 gntR; DNA-binding transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D APECO1_2130 idnR; L-idonate regulatory protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator D APECO1_3341 ebgR; Ebg operon repressor K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor D APECO1_703 malI; maltose regulon regulatory protein MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D APECO1_655 putative transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator D APECO1_2348 phnF; PhnF, putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D APECO1_299 fadR; negative regulator for fad regulon, and positive activator of fabA K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D APECO1_1872 pdhR; transcriptional regulator for pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D APECO1_3447 glcC; Glc operon transcriptional activator K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D APECO1_2107 uxuR; UxuR, uxu operon transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D APECO1_3409 putative regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D APECO1_3325 exuR; negative regulator of Exu regulon, ExuT, UxaAC, and UxuB K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D APECO1_2851 lldR; DNA-binding transcriptional repressor K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D APECO1_2762 dgoR; putative galactonate operon transcriptional repressor DgoR K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D APECO1_3217 nanR; transcriptional regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor D APECO1_3849 putative regulatory protein, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D APECO1_38572 ygaE; putative transcriptional regulator YgaE K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D APECO1_660 conserved hypothetical protein K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor D APECO1_2067 yjjM; putative DNA-binding transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism D APECO1_O1R84 tetR; TetR K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D APECO1_1677 betI; regulatory protein BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D APECO1_1550 acrR; acrAB operon repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D APECO1_2820 ttk; putative transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator D APECO1_104 ycdC; transcriptional regulator YcdC K09017 rutR; TetR/AcrR family transcriptional regulator D APECO1_731 ydhM; putative DNA-binding transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D APECO1_701 uidR; repressor for uid operon K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D APECO1_3175 envR; putative acrEF/envCD operon repressor K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D APECO1_192 ycfQ; putative transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D APECO1_2500 yijC; putative TetR-family transcriptional regulatory protein YijC K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D APECO1_1294 ybiH; putative transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D APECO1_1247 ybjK; putative DEOR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D APECO1_2720 asnC; DNA-binding transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D APECO1_1200 lrp; Leucine-responsive Regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APECO1_1564 ybaO; putative transcriptional regulator YbaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D APECO1_957 sdiA; DNA-binding transcriptional activator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APECO1_1703 ykgK; conserved hypothetical protein K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator D APECO1_990 rcsA; positive regulator for ctr capsule biosynthesis, positive transcription factor K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APECO1_125 csgD; probable csgAB operon transcriptional regulatory protein K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D APECO1_2950 yhiF; predicted DNA-binding ranscriptional regulator K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator D APECO1_2058 bglJ; BglJ 2-component transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides D APECO1_3048 malT; MalT-maltotriose-ATP transcriptional activator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D APECO1_2937 gadE; putative DNA-binding transcriptional activator K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator D APECO1_648 marR; multiple antibiotic resistance protein MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR D APECO1_725 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D APECO1_3838 mprA; DNA-binding transcriptional repressor of microcin B17 synthesis K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D APECO1_2260 papX; putative regulator PapX protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D APECO1_1713 conserved hypothetical protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D APECO1_1525 ybbI; putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D APECO1_3155 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D APECO1_2394 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D APECO1_4422 yehV; MerR-like regulator A K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D APECO1_277 ycgE; putative transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes D APECO1_1381 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D APECO1_2424 yjbK; putative zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D APECO1_2459 iclR; aceBAK operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D APECO1_1508 ybbU; putative regulator of allantoin regulon YbbU K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons D APECO1_882 kdgR; transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D APECO1_2876 yiaJ; predicted DNA-binding transcriptional repressor K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor D APECO1_3098 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APECO1_487 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D APECO1_4391 yeiL; ribonucleoside hydrolase 2 K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D APECO1_3994 iscR; DNA-binding transcriptional repressor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D APECO1_2214 yjeB; conserved hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D APECO1_579 ydcN; conserved hypothetical protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D APECO1_1275 mntR; DNA-binding transcriptional regulator of mntH K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D APECO1_2361 rpiR; putative transcriptional regulator RpiR K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon D APECO1_903 yebK; hex regulon repressor K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D APECO1_2640 putative transcriptional regulatory protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D APECO1_2494 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D APECO1_3177 fis; DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APECO1_1986 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D APECO1_1658 prpR; DNA-binding transcriptional activator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D APECO1_3246 nlp; sugar fermentation stimulation protein B K07724 ner; Ner family transcriptional regulator D APECO1_1913 sgrR; DNA-binding transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator D APECO1_1991 nadR; transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D APECO1_2412 NadR transcriptional repressor / NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D APECO1_O1R105 putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APECO1_638 hipB; HipB transcriptional activator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APECO1_O1R78 conserved hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APECO1_503 putative regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D APECO1_1043 putative transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D APECO1_3809 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D APECO1_3817 ygaA; putative sigma-54-dependent transcriptional regulator YgaA K12266 norR; anaerobic nitric oxide reductase transcription regulator D APECO1_3794 fhlA; formate hydrogenlyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator D APECO1_1823 cdaR; carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator D APECO1_1327 modE; transcriptional regulator modE K02019 modE; molybdate transport system regulatory protein D APECO1_3793 putative molybdenum-pterin-binding-protein K02019 modE; molybdate transport system regulatory protein D APECO1_2893 yiaG; putative transcriptional regulator K07726 K07726; putative transcriptional regulator D APECO1_1989 putative regulatory protein K07726 K07726; putative transcriptional regulator D APECO1_2576 conserved hypothetical protein K07726 K07726; putative transcriptional regulator D APECO1_231 conserved hypothetical protein K07729 K07729; putative transcriptional regulator D APECO1_2973 nikR; nickel responsive regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D APECO1_2533 metJ; transcriptional repressor for methionine biosynthesis (MetJ family) K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D APECO1_105 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APECO1_3689 antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D APECO1_2738 bglG; transcriptional antiterminator of the bgl operon K03488 licT; beta-glucoside operon transcriptional antiterminator D APECO1_1644 frmR; regulator protein that represses frmRAB operon K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D APECO1_1576 bolA; regulator of penicillin binding proteins and beta lactamase transcription K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D APECO1_O1CoBM4 sopB; SopB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO1_O1R13 parB; ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO1_O1CoBM16 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO1_2615 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH D APECO1_3207 argR; repressor of arg regulon ArgR K03402 argR; transcriptional regulator of arginine metabolism D APECO1_2146 putative arganine repressor K03402 argR; transcriptional regulator of arginine metabolism D APECO1_1396 nagC; transcriptional repressor of nag K02565 nagC; N-acetylglucosamine repressor D APECO1_677 mlc; Mlc protein K15545 mlc; transcriptional regulator of PTS gene D APECO1_2856 mtlR; mtl operon repressor MtlR K02562 mtlR; mannitol operon repressor D APECO1_476 tyrR; transcriptional regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D APECO1_2320 cadC; transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon D APECO1_4078 gcvR; DNA-binding transcriptional repressor, regulatory protein accessory to GcvA K03567 gcvR; glycine cleavage system transcriptional repressor D APECO1_458 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator D APECO1_460 pspC; phage shock protein C K03973 pspC; phage shock protein C D APECO1_318 glycerol metabolism operon regulatory protein K05880 dhaR; transcriptional activator for dhaKLM operon D APECO1_2094 ibeR; putative regulatory protein IbeR K05880 dhaR; transcriptional activator for dhaKLM operon D APECO1_1441 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase D APECO1_4024 putative phage regulatory protein K07733 alpA; prophage regulatory protein D APECO1_1086 putative transcriptional regulator K07733 alpA; prophage regulatory protein D APECO1_3573 yqgE; conserved hypothetical protein K07735 algH; putative transcriptional regulator D APECO1_1947 caiF; transcriptional regulator of cai operon K08277 caiF; transcriptional activator CaiF D APECO1_1840 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D APECO1_1597 nrdR; NrdR repressor protein K07738 nrdR; transcriptional repressor NrdR D APECO1_1729 crl; crl transcriptional regulator K11926 crl; sigma factor-binding protein Crl D APECO1_3045 rtcR; transcriptional regulatory protein RtcR K14414 rtcR; transcriptional regulatory protein RtcR D APECO1_377 conserved hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D APECO1_3398 ygiV; putative transcriptional regulator K07471 ygiV; probable transcriptional regulator C 03021 Transcription machinery [BR:ecv03021] D APECO1_3152 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APECO1_2486 rpoB; DNA-directed RNA polymerase beta chain protein RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APECO1_2485 rpoC; RNA polymerase, beta prime subunit RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APECO1_2812 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D APECO1_3348 rpoD; RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures K03086 rpoD; RNA polymerase primary sigma factor D APECO1_3782 rpoS; sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D APECO1_3958 rpoE; RNA polymerase, sigma 24 (sigma E) factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D APECO1_2992 rpoH; RNA polymerase sigma factor K03089 rpoH; RNA polymerase sigma-32 factor D APECO1_3233 rpoN; DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor D APECO1_963 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D APECO1_1925 hepA; ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D APECO1_3261 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D APECO1_2490 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D APECO1_3215 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D APECO1_3216 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B D APECO1_3959 rseA; sigma-E factor, negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA D APECO1_3960 rseB; sigma-E factor regulatory protein RseB precursor K03598 rseB; sigma-E factor negative regulatory protein RseB D APECO1_3961 rseC; sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D APECO1_1840 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D APECO1_3251 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D APECO1_3058 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D APECO1_2691 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APECO1_1798 rof; Rho-binding antiterminator protein K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:ecv03019] D APECO1_166 rne; Rnase E K08300 rne; ribonuclease E [EC:3.1.26.12] D APECO1_3198 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D APECO1_3964 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APECO1_2213 rnr; exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APECO1_2227 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D APECO1_2693 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D APECO1_1293 rhlE; putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D APECO1_3268 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APECO1_2654 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APECO1_3751 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO1_3266 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APECO1_2691 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APECO1_2553 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APECO1_1965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO1_2246 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_O1R91 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_2219 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D APECO1_4068 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D APECO1_1842 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D APECO1_3675 ygdP; dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D APECO1_3193 yhdA; conserved hypothetical protein K18765 csrD; RNase E specificity factor CsrD D APECO1_2139 yjgD; conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B D APECO1_3230 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ D APECO1_564 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D APECO1_1837 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ecv03011] D APECO1_23 rpsA; RpsA K02945 RP-S1; small subunit ribosomal protein S1 D APECO1_1818 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D APECO1_3136 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D APECO1_3151 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D APECO1_3146 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D APECO1_2192 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D APECO1_3112 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D APECO1_3143 rpsH; 30S ribosomal subunit protein S8, and regulator K02994 RP-S8; small subunit ribosomal protein S8 D APECO1_3214 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D APECO1_3130 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D APECO1_3150 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D APECO1_3111 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D APECO1_3149 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D APECO1_3142 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D APECO1_3265 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D APECO1_3924 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D APECO1_3138 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D APECO1_3134 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D APECO1_3133 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D APECO1_3131 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D APECO1_3132 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D APECO1_3141 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D APECO1_3144 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D APECO1_2190 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D APECO1_2488 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D APECO1_3213 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D APECO1_3139 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D APECO1_3147 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D APECO1_3137 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D APECO1_3153 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D APECO1_3145 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D APECO1_3927 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D APECO1_789 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D APECO1_3135 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D APECO1_3140 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D APECO1_1701 ykgM; 50S ribosomal protein L31 type B-1 K02909 RP-L31; large subunit ribosomal protein L31 C 03009 Ribosome biogenesis [BR:ecv03009] D APECO1_3964 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APECO1_2227 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D APECO1_3965 era; membrane-associated, 16S rRNA-binding GTPase K03595 era; GTPase D APECO1_3249 obgE; GTPase involved in cell partioning and DNA repair K03979 obgE; GTPase [EC:3.6.5.-] D APECO1_1840 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D APECO1_3261 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D APECO1_2490 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D APECO1_4372 rsuA; 16S rRNA pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D APECO1_1931 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D APECO1_3158 sun; Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D APECO1_2055 yjjT; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D APECO1_2988 yhhF; putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D APECO1_3575 yggJ; conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D APECO1_889 yebU; conserved hypothetical protein K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D APECO1_2723 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D APECO1_1904 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D APECO1_3284 yraL; putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D APECO1_2956 yhiQ; conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D APECO1_879 yebH; ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D APECO1_2212 yjfH; conserved hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D APECO1_3253 ftsJ; cell division protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D APECO1_1284 ybiN; conserved hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D APECO1_3334 ygjO; putative ribosomal RNA small subunit methyltransferase D K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D APECO1_1419 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D APECO1_72 yccW; conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D APECO1_2954 yhiR; putative DNA (exogenous) processing protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D APECO1_53 ycbY; YcbY K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D APECO1_3725 ygdE; methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D APECO1_4007 yfgB; putative Fe-S-cluster redox enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D APECO1_3746 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D APECO1_1234 ybjF; hypothetical RNA methyltransferase YbjF K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D APECO1_1926 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D APECO1_429 rluB; 23S rRNA pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D APECO1_168 conserved hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D APECO1_3936 rluD; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D APECO1_217 rluE; 23S rRNA pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D APECO1_2446 yjbC; conserved hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D APECO1_2053 conserved hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D APECO1_148 rimJ; RimJ K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D APECO1_1241 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D APECO1_573 rimL; ribosomal-protein-L7/L12-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D APECO1_3925 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM D APECO1_1258 yliG; conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D APECO1_17 ycaO; YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D APECO1_3179 prmA; methylase for 50S ribosomal subunit protein L11 K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D APECO1_4234 prmB; protein-(glutamine-N5) methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D APECO1_210 ycfD; conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D APECO1_166 rne; Rnase E K08300 rne; ribonuclease E [EC:3.1.26.12] D APECO1_3198 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D APECO1_3572 yqgF; Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D APECO1_495 dbpA; ATP-independent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D APECO1_3268 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APECO1_39552 srmB; putative transcriptional regulator YfiE K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D APECO1_2228 yjeQ; ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D APECO1_4013 engA; putative GTP-binding protein EngA K03977 engA; GTPase D APECO1_2218 hflX; HflX protein, GTP-binding subunit of protease specific for phage lambda cII repressor K03665 hflX; GTPase D APECO1_3164 yrdC; putative ribosome maturation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D APECO1_2811 spoT; guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D APECO1_3263 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D APECO1_3260 yhbC; conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP D APECO1_1404 putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor D APECO1_2855 conserved hypothetical protein K14762 yibL; ribosome-associated protein D APECO1_2158 yjgA; conserved hypothetical protein K09889 yjgA; ribosome-associated protein D APECO1_3232 yhbH; putative sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor D APECO1_319 ychF; putative GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D APECO1_170 yceD; conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ecv03016] D APECO1_4293 elaC; conserved hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11] D APECO1_3358 cca; tRNA nucleotidyl transferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D APECO1_3046 rtcB; conserved hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D APECO1_4141 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO1_1793 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APECO1_1957 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APECO1_14132 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APECO1_4433 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APECO1_1384 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APECO1_926 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APECO1_2324 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO1_3637 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APECO1_916 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APECO1_3829 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APECO1_42 asnS; AsnS K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APECO1_791 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APECO1_1196 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APECO1_1488 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APECO1_2136 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APECO1_4010 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APECO1_788 pheS; phenylalanine tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APECO1_787 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APECO1_720 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APECO1_3079 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D APECO1_2580 dtd; D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D APECO1_184 ycfF; HIT-like protein YcfF K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D APECO1_3561 yggH; tRNA(m7G46)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D APECO1_1792 yaeB; conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D APECO1_4246 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D APECO1_3264 truB; tRNA pseudouridine 5S synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D APECO1_3778 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D APECO1_3995 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APECO1_3164 yrdC; putative ribosome maturation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D APECO1_2220 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D APECO1_2753 trmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D APECO1_2722 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D APECO1_833 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D APECO1_2172 cysQ; PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D APECO1_27542 rnpA; inner membrane protein translocase component YidC K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D APECO1_734 rnt; RNase T K03683 rnt; ribonuclease T [EC:3.1.13.-] D APECO1_2818 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D APECO1_1440 rna; ribonuclease I precursor K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21] D APECO1_445 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D APECO1_862 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D APECO1_1838 yadP; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D APECO1_2087 yjiI; conserved hypothetical protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D APECO1_1988 yjjK; ABC transporter ATP-binding protein YjjK K06020 ettA; energy-dependent translational throttle protein EttA D APECO1_2890 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APECO1_2891 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APECO1_1841 yadB; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D APECO1_1532 ybaK; conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D APECO1_855 yeaK; conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D APECO1_3972 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D APECO1_2423 yjbN; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D APECO1_3178 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D APECO1_4410 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D APECO1_1402 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D APECO1_920 yecO; conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D APECO1_921 yecP; conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D APECO1_33 smtA; SmtA K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D APECO1_1977 lasT; putative rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D APECO1_2498 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D APECO1_3926 trmD; tRNA (guanine-1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D APECO1_2810 spoU; tRNA (Guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D APECO1_3993 yfhQ; putative methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D APECO1_2849 yibK; predicted rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D APECO1_3956 yfiC; conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D APECO1_3740 yqcB; tRNA pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D APECO1_1926 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D APECO1_215 ycfB; putative ATPase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D APECO1_496 ydaO; hypothetical protein YdaO K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D APECO1_3110 yheL; putative intracellular sulfur oxidation protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D APECO1_3109 yheM; conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D APECO1_3108 yheN; conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D APECO1_74 yccK; predicted sulfite reductase subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D APECO1_3997 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein D APECO1_3629 ygfZ; putative global regulator K06980 ygfZ; tRNA-modifying protein YgfZ D APECO1_4240 yfcK; conserved hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D APECO1_1605 queA; putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D APECO1_1567 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D APECO1_3767 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D APECO1_3756 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D APECO1_3737 yqcD; conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D APECO1_2225 yjeS; putative electron transport protein YjeS K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D APECO1_509 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D APECO1_1511 ybbB; tRNA 2-selenouridine synthase, selenophosphate-dependent K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D APECO1_1604 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D APECO1_1588 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APECO1_1799 mesJ; putative cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D APECO1_4083 ypfI; conserved hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D APECO1_865 yeaZ; O-sialoglycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D APECO1_3350 ygjD; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D APECO1_2223 yjeE; conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D APECO1_3720 ygdL; conserved hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D APECO1_2213 rnr; exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APECO1_3266 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APECO1_O1CoBM111 vagD; VagD K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:ecv03012] D APECO1_442 yciH; putative translation initiation factor K03113 EIF1; translation initiation factor 1 D APECO1_3262 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D APECO1_3102 yheS; putative ATP-binding component of a transport system K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D APECO1_2492 tufA; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D APECO1_3114 tufA; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D APECO1_3113 fusA; elongation factor EF-2 K02355 fusA; elongation factor G D APECO1_2863 selB; selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor D APECO1_328 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D APECO1_1815 frr; ribosome releasing factor K02838 frr; ribosome recycling factor D APECO1_329 hemK; protein methyltransferase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D APECO1_320 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D APECO1_2242 efp; elongation factor P (EF-P) K02356 efp; elongation factor P D APECO1_4383 conserved hypothetical protein K02356 efp; elongation factor P D APECO1_2234 yjeA; lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D APECO1_2243 yjeK; putative lysine aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D APECO1_4238 yfcM; conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D APECO1_3636 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D APECO1_2006 prfC; peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3 D APECO1_1733 prfH; peptide chain release factor-like protein K02839 prfH; peptide chain release factor D APECO1_1796 yaeJ; conserved hypothetical protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:ecv03110] D APECO1_1213 clpA; ATP-dependent clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D APECO1_3938 clpB; heat shock protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D APECO1_1573 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D APECO1_2539 hslU; ATP-dependent protease ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D APECO1_1542 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D APECO1_1965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO1_3999 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA D APECO1_1160 yegD; hypothetical chaperone protein K04046 yegD; hypothetical chaperone protein D APECO1_2246 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_O1R91 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_1964 dnaJ; chaperone with DnaK; heat shock protein K03686 dnaJ; molecular chaperone DnaJ D APECO1_93 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D APECO1_1927 djlA; Dna-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein D APECO1_3998 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D APECO1_3063 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33 D APECO1_2770 ibpA; heat shock protein K04080 ibpA; molecular chaperone IbpA D APECO1_2771 ibpB; heat shock protein K04081 ibpB; molecular chaperone IbpB D APECO1_3064 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D APECO1_1824 htrA; periplasmic serine protease Do, heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D APECO1_3254 hflB; putative ATP-dependent zinc metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D APECO1_2725 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APECO1_2114 fimC; type I fimbrial chaperone K07346 fimC; fimbrial chaperone protein D APECO1_633 chaperone protein fimC precursor K07346 fimC; fimbrial chaperone protein D APECO1_3031 fimbrial chaperone protein precursor K07346 fimC; fimbrial chaperone protein D APECO1_2846 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D APECO1_2555 cpxP; periplasmic repressor of cpx regulon by interaction with CpxA K06006 cpxP; periplasmic protein CpxP/Spy D APECO1_812 spy; spheroplast protein Y precursor K06006 cpxP; periplasmic protein CpxP/Spy D APECO1_2473 zraP; periplasmic zinc resistance-associated protein precursor ZraP K07803 zraP; zinc resistance-associated protein D APECO1_2939 hdeA; stress response protein; acid-resistance protein K19777 hdeA; acid stress chaperone HdeA D APECO1_2940 hdeB; putative acid resistance protein HdeB K19778 hdeB; acid stress chaperone HdeB D APECO1_3431 hybF; protein involved with the maturation of hydrogenases 1 and 2 K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D APECO1_3799 hypA; protein involved in nickel insertion into hydrogenases 3 K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D APECO1_3798 hypB; GTP hydrolase involved in nickel liganding into hydrogenases K04652 hypB; hydrogenase nickel incorporation protein HypB D APECO1_91 torD; chaperone protein TorD K03533 torD; TorA specific chaperone D APECO1_674 ynfI; putative oxidoreductase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D APECO1_3093 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APECO1_1570 ppiD; peptidyl-prolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D APECO1_3106 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D APECO1_2179 fklB; FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (a rotamase) K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D APECO1_1955 slpA; putative FKBX-type 16KD peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D APECO1_3105 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D APECO1_2696 ppiC; peptidyl-prolyl cis-trans isomerase C (rotamase C) K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D APECO1_1929 surA; survival protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D APECO1_3950 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D APECO1_1517 ybbN; putative thioredoxin domain-containing protein K05838 ybbN; putative thioredoxin D APECO1_1244 grxA; glutaredoxin 1 K03674 grxA; glutaredoxin 1 D APECO1_146 grxB; GrxB K03675 grxB; glutaredoxin 2 D APECO1_735 ydhO; conserved hypothetical protein K07390 grxD; monothiol glutaredoxin D APECO1_2601 dsbA; DsbA, periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D APECO1_297 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D APECO1_3634 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D APECO1_O1R141 dsbC; DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D APECO1_2252 dsbD; thiol:disulfide interchange protein precursor K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D APECO1_4363 ccmG; periplasmic thioredoxin of cytochrome c-type biogenesis K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D APECO1_1445 dsbG; thiol:disulfide interchange protein dsbG precursor K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:ecv04131] D APECO1_4006 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APECO1_567 glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO1_847 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO1_1333 gpmA; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO1_904 pykA; Pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO1_754 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO1_1542 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:ecv04121] C 03051 Proteasome [BR:ecv03051] D APECO1_1542 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ecv03032] D APECO1_1776 rnhA; RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D APECO1_998 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_O1R127 cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_2475 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D APECO1_1571 hupB; DNA-binding protein HU-beta, NS1 (HU-1) K03530 hupB; DNA-binding protein HU-beta D APECO1_2755 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D APECO1_4187 putative replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D APECO1_2415 dnaB; replicative DNA helicase protein DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D APECO1_2063 dnaC; DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D APECO1_3349 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D APECO1_2397 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO1_O1CoBM14 ssb; Ssb K03111 ssb; single-strand DNA-binding protein D APECO1_1803 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO1_2756 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO1_2135 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO1_1415 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO1_180 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO1_1775 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_O1CoBM130 yacC; YacC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_1545 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO1_1804 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D APECO1_2598 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO1_4135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_2814 yicF; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_693 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein D APECO1_O1R51 putative DNA replication termination protein K10748 tus; DNA replication terminus site-binding protein D APECO1_3076 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO1_O1R219 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO1_1377 seqA; negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication D APECO1_4073 had; DNA replication initiation factor K10763 hda; DnaA-homolog protein D APECO1_4329 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D APECO1_2758 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D APECO1_3400 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APECO1_3383 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APECO1_434 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D APECO1_832 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ecv03036] D APECO1_998 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_O1R127 cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_3964 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APECO1_351 hns; H-ns K03746 hns; DNA-binding protein H-NS D APECO1_3853 stpA; DNA-binding protein StpA K11685 stpA; DNA-binding protein StpA D APECO1_2475 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D APECO1_1571 hupB; DNA-binding protein HU-beta, NS1 (HU-1) K03530 hupB; DNA-binding protein HU-beta D APECO1_93 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D APECO1_92 yccD; conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D APECO1_1983 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO1_2755 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D APECO1_3281 putative phosphosugar isomerase K12961 diaA; DnaA initiator-associating protein D APECO1_71 conserved hypothetical protein K11940 hspQ; heat shock protein HspQ D APECO1_1279 dps; stationary phase nucleoid protein Dps K04047 dps; starvation-inducible DNA-binding protein D APECO1_3177 fis; DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APECO1_2219 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D APECO1_3614 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D APECO1_1200 lrp; Leucine-responsive Regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APECO1_4369 yejK; nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein D APECO1_36 mukB; MukB K03632 mukB; chromosome partition protein MukB D APECO1_35 mukE; MukE K03804 mukE; chromosome partition protein MukE D APECO1_34 mukF; MukF K03633 mukF; chromosome partition protein MukF D APECO1_1892 ftsA; cell division protein K03590 ftsA; cell division protein FtsA D APECO1_3775 ftsB; cell divison protein FtsB K05589 ftsB; cell division protein FtsB D APECO1_2990 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APECO1_1902 ftsI; peptidoglycan synthetase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APECO1_1199 ftsK; Cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D APECO1_1903 ftsL; cell division protein; ingrowth of wall at septum K03586 ftsL; cell division protein FtsL D APECO1_2537 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN D APECO1_1893 ftsQ; cell division protein; ingrowth of wall at septum K03589 ftsQ; cell division protein FtsQ D APECO1_1897 ftsW; cell division; membrane protein involved in shape determination K03588 ftsW; cell division protein FtsW D APECO1_2991 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D APECO1_1891 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APECO1_4134 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D APECO1_3618 conserved hypothetical protein K09888 zapA; cell division protein ZapA D APECO1_51 ycbW; YcbW K18657 zapC; cell division protein ZapC D APECO1_1886 yacF; conserved hypothetical protein K18778 zapD; cell division protein ZapD D APECO1_3212 yhcM; conserved hypothetical protein K06916 zapE; cell division protein ZapE D APECO1_2180 ytfB; putative cell envelope opacity-associated protein K07269 ytfB; cell division protein YtfB D APECO1_4113 amiA; putative N-acetylmuramoyl-L-alanine amidase AmiA precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_2222 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_3688 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APECO1_449 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_1551 acrA; acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_289 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D APECO1_288 minD; cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D APECO1_287 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D APECO1_63 sulA; SulA K13053 sulA; cell division inhibitor SulA D APECO1_2820 ttk; putative transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator D APECO1_1377 seqA; negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication D APECO1_3194 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APECO1_3195 mreC; cell wall structural complex MreBCD transmembrane component MreC K03570 mreC; rod shape-determining protein MreC D APECO1_3196 mreD; cell wall structural complex MreBCD transmembrane component MreD K03571 mreD; rod shape-determining protein MreD D APECO1_1421 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D APECO1_O1CoBM3 sopA; SopA K03496 parA; chromosome partitioning protein D APECO1_O1CoBM4 sopB; SopB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO1_O1R13 parB; ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO1_O1CoBM16 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO1_3400 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APECO1_3383 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APECO1_2722 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D APECO1_2723 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D APECO1_2665 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D APECO1_3633 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D APECO1_4434 mrp; putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D APECO1_3094 fic; cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D APECO1_2597 yihA; putative GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ecv03400] D APECO1_488 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D APECO1_1367 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D APECO1_3952 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D APECO1_3560 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D APECO1_716 nth; endonuclease III; specific for apurinic and/or apyrimidinic sites K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D APECO1_1887 mutT; nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D APECO1_2821 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D APECO1_4346 ada; Ada transcriptional dual regulator / O-6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D APECO1_4347 alkB; AlkB repair system protein for alkylated DNA and RNA K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D APECO1_3347 ygjF; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D APECO1_1159 alkA; 3-methyl-adenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D APECO1_2899 tag; 3-methyl-adenine DNA glycosylase I, constitutive K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D APECO1_2824 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D APECO1_1361 nei; endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D APECO1_818 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D APECO1_4393 yeiH; conserved hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D APECO1_2477 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D APECO1_3635 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APECO1_4135 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_2814 yicF; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APECO1_2598 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APECO1_2398 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D APECO1_1310 uvrB; excision nuclease subunit B K03702 uvrB; excinuclease ABC subunit B D APECO1_955 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D APECO1_810 thrL; endonuclease of nucleotide excision repair K05984 cho; excinuclease Cho [EC:3.1.25.-] D APECO1_2663 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO1_O1CoBM78 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APECO1_2486 rpoB; DNA-directed RNA polymerase beta chain protein RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APECO1_2485 rpoC; RNA polymerase, beta prime subunit RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APECO1_3152 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APECO1_2812 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D APECO1_195 mfd; transcription-repair coupling factor; mutation frequency decline K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D APECO1_3791 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D APECO1_2221 mutL; MutL, enzyme in methyl-directed mismatch repair K03572 mutL; DNA mismatch repair protein MutL D APECO1_3674 mutH; DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D APECO1_1109 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D APECO1_4017 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D APECO1_895 exoX; exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D APECO1_1803 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APECO1_2756 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APECO1_2135 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APECO1_1415 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APECO1_180 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APECO1_1775 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_O1CoBM130 yacC; YacC K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APECO1_1545 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APECO1_2397 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO1_O1CoBM14 ssb; Ssb K03111 ssb; single-strand DNA-binding protein D APECO1_3076 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO1_O1R219 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO1_997 vsr; DNA mismatch endonuclease, patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D APECO1_3685 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D APECO1_3683 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D APECO1_3686 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D APECO1_3827 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA D APECO1_911 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA D APECO1_910 ruvB; Holliday junction DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D APECO1_913 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D APECO1_239 rusA; endonuclease RUS K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO1_386 rusA; endodeoxyribonuclease RusA K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO1_2038 bacteriophage V crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO1_1033 Holliday junction resolvase K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO1_4193 Holliday junction resolvase K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO1_3880 bacteriophage V crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APECO1_2535 priA; primosome factor n' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D APECO1_2191 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D APECO1_1548 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D APECO1_2062 dnaT; primosomal protein I K02317 dnaT; DNA replication protein DnaT D APECO1_1613 sbcC; ATP-dependent dsDNA exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50 D APECO1_1612 sbcD; ATP-dependent dsDNA exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 D APECO1_1992 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D APECO1_2757 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D APECO1_2809 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D APECO1_3966 recO; gap repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D APECO1_1543 recR; recombination protein RecR K06187 recR; recombination protein RecR D APECO1_3918 recN; DNA recombination and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D APECO1_1616 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC D APECO1_1211 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D APECO1_4371 yejH; putative ATP-dependet helicase K19789 radD; DNA repair protein RadD D APECO1_2131 yjgR; predicted ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D APECO1_4329 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D APECO1_2758 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D APECO1_434 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D APECO1_2475 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D APECO1_1571 hupB; DNA-binding protein HU-beta, NS1 (HU-1) K03530 hupB; DNA-binding protein HU-beta D APECO1_500 recE; Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-] D APECO1_4025 RecT-like protein K07455 recT; recombination protein RecT D APECO1_499 recT; recombinational DNA repair protein K07455 recT; recombination protein RecT D APECO1_3177 fis; DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APECO1_2654 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APECO1_351 hns; H-ns K03746 hns; DNA-binding protein H-NS D APECO1_1738 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D APECO1_296 umuC; mutagenesis and repair protein UmuC K03502 umuC; DNA polymerase V D APECO1_O1R136 mucB; UV protection and repair protein K03502 umuC; DNA polymerase V D APECO1_295 umuD; mutagenesis and repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D APECO1_O1R135 mucA; UV protection and repair protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D APECO1_2426 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO1_2039 conserved hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO1_3879 conserved hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D APECO1_1924 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D APECO1_2816 dinD; DNA-damage-inducible protein K14623 dinD; DNA-damage-inducible protein D D APECO1_143 dinI; DinI K12149 dinI; DNA-damage-inducible protein I D APECO1_3828 recX; regulatory protein for RecA K03565 recX; regulatory protein D APECO1_3055 yhgA; conserved hypothetical protein K01157 rpnA; recombination-promoting nuclease RpnA [EC:3.1.21.-] D APECO1_4259 yfcI; conserved hypothetical protein K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-] D APECO1_1853 conserved hypothetical protein K24088 rpnC; recombination-promoting nuclease RpnC [EC:3.1.21.-] D APECO1_2081 yjiP; conserved hypothetical protein K24089 rpnD; recombination-promoting nuclease RpnD [EC:3.1.21.-] D APECO1_4317 yfaD; conserved hypothetical protein K24090 rpnE; recombination-promoting nuclease RpnE D APECO1_2695 rep; DNA helicase and single-stranded DNA-dependent ATPase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D APECO1_67 helD; HelD K03658 helD; DNA helicase IV [EC:5.6.2.4] D APECO1_1291 dinG; putative ATP-dependent helicase dinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D APECO1_866 yoaA; Probable ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D APECO1_4326 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO1_3846 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APECO1_4325 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APECO1_3845 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ecv03029] D APECO1_3262 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D APECO1_2492 tufA; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D APECO1_3114 tufA; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D APECO1_3113 fusA; elongation factor EF-2 K02355 fusA; elongation factor G D APECO1_3965 era; membrane-associated, 16S rRNA-binding GTPase K03595 era; GTPase D APECO1_720 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APECO1_14132 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APECO1_916 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APECO1_926 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APECO1_2397 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APECO1_O1CoBM14 ssb; Ssb K03111 ssb; single-strand DNA-binding protein D APECO1_1810 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D APECO1_1965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO1_2246 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_O1R91 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_1964 dnaJ; chaperone with DnaK; heat shock protein K03686 dnaJ; molecular chaperone DnaJ D APECO1_3995 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APECO1_3998 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D APECO1_735 ydhO; conserved hypothetical protein K07390 grxD; monothiol glutaredoxin D APECO1_4434 mrp; putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D APECO1_1583 cyoE; cytochrome o ubiquinol oxidase C subunit K02257 COX10; heme o synthase [EC:2.5.1.141] D APECO1_2754 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO1_1542 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ecv02000] D APECO1_1056 ybtP; putative inner membrane ABC-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D APECO1_1055 putative ABC transporter protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D APECO1_26 msbA; MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D APECO1_1563 mdlA; multidrug resistance-like ATP-binding protein MdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D APECO1_1562 mdlB; multidrug resistance-like ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D APECO1_O1CoBM140 iroC; IroC K18895 iroC; ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter D APECO1_1203 cydC; Transport ATP-binding protein cydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D APECO1_1202 cydD; Transport ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D APECO1_1215 ybjZ; macrolide-specific ABC-type efflux carrier K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D APECO1_O1CoBM198 etsB; EtsB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D APECO1_4348 yojI; putative ABC transporter ATP-binding protein YojI K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D APECO1_624 yddA; putative ATP-binding component of a transport system K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D APECO1_55 uup; Uup K15738 uup; ABC transport system ATP-binding/permease protein D APECO1_4121 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APECO1_2552 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APECO1_4122 cysT; sulfate/thiosulfate transporter subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D APECO1_4123 cysW; sulfate/thiosulfate transporter subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D APECO1_4124 cysA; sulfate transport ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APECO1_1326 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein D APECO1_1325 modB; molybdate transport permease protein K02018 modB; molybdate transport system permease protein D APECO1_1324 modC; ATP-binding component of molybdate transport K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D APECO1_1328 modF; putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein D APECO1_1639 tauA; taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D APECO1_1637 tauC; taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein D APECO1_1638 tauB; taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APECO1_48 ssuA; SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D APECO1_46 ssuC; SsuC K15554 ssuC; sulfonate transport system permease protein D APECO1_45 ssuB; SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APECO1_1914 tbpA; thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein D APECO1_1915 thiP; thiamine transport system permease protein ThiP K02063 thiP; thiamine transport system permease protein D APECO1_1916 thiQ; thiamine transport ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D APECO1_204 potD; spermidine/putrescine-binding periplasmic protein precursor PotS K11069 potD; spermidine/putrescine transport system substrate-binding protein D APECO1_206 potC; spermidine/putrescine transport system permease K11070 potC; spermidine/putrescine transport system permease protein D APECO1_207 potB; spermidine-putrescine transport system permease K11071 potB; spermidine/putrescine transport system permease protein D APECO1_208 potA; ATP-binding component of spermidine/putrescine transport K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D APECO1_1239 potF; putrescine-binding periplasmic protein precursor K11073 potF; putrescine transport system substrate-binding protein D APECO1_1236 potI; putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein D APECO1_1237 potH; putrescine transport protein K11075 potH; putrescine transport system permease protein D APECO1_1238 potG; putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D APECO1_582 ydcS; putative ABC transporter periplasmic binding protein YdcS precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D APECO1_585 putative transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D APECO1_584 ydcU; hypothetical ABC transporter permease protein YdcU K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D APECO1_583 ydcT; hypothetical ABC transporter ATP-binding protein YdcT K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D APECO1_3842 proX; glycine betaine transporter subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein D APECO1_3843 proW; glycine betaine/L-proline transport system permease protein P K02001 proW; glycine betaine/proline transport system permease protein D APECO1_3844 proV; ATP-binding component of transport system for glycine, betaine and proline K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D APECO1_4418 yehZ; putative transporter subunit: periplasmic-binding component of ABC superfamily K05845 opuC; osmoprotectant transport system substrate-binding protein D APECO1_4421 yehW; putative transporter subunit: membrane component of ABC superfamily K05846 opuBD; osmoprotectant transport system permease protein D APECO1_4419 yehY; putative transporter subunit: membrane component of ABC superfamily K05846 opuBD; osmoprotectant transport system permease protein D APECO1_4420 yehX; putative transporter subunit: ATP-binding component of ABC superfamily K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D APECO1_823 ynjB; conserved hypothetical protein K05777 ynjB; putative thiamine transport system substrate-binding protein D APECO1_824 ynjC; putative ABC transporter permease protein YnjC K05778 ynjC; putative thiamine transport system permease protein D APECO1_826 ynjD; conserved hypothetical ABC transporter ATP-binding protein YnjD K05779 ynjD; putative thiamine transport system ATP-binding protein D APECO1_2434 malE; periplasmic maltose-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APECO1_2435 malF; maltose transport system permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein D APECO1_2436 malG; maltose transport system permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein D APECO1_2433 malK; maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO1_471 ycjV; hypothetical ABC transporter ATP-binding protein YcjV K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO1_946 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein D APECO1_944 araH; high-affinity L-arabinose transport system; membrane protein K10538 araH; L-arabinose transport system permease protein D APECO1_945 araG; L-arabinose transport ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D APECO1_4401 mglB; methyl-galactoside transporter subunit MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D APECO1_4403 mglC; galactoside transport system permease protein MglC K10541 mglC; methyl-galactoside transport system permease protein D APECO1_4402 mglA; galactoside transport ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D APECO1_2883 xylF; ABC-type xylose transport system, periplasmic component XylF K10543 xylF; D-xylose transport system substrate-binding protein D APECO1_28812 xylH; DNA-binding transcriptional activator, xylose-binding K10544 xylH; D-xylose transport system permease protein D APECO1_2882 xylG; ABC-type xylose transport system, ATPase component XylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D APECO1_3983 yphF; ABC-type sugar transport system, periplasmic component YphF K23545 yphF; sugar transport system substrate-binding protein D APECO1_3985 yphD; ABC-type sugar transport system permease component YphD K23546 yphD; sugar transport system permease protein D APECO1_3984 yphE; ABC-type sugar transport system, ATP-binding component YphE K23547 yphE; sugar transport system ATP-binding protein D APECO1_2362 D-allose-binding periplasmic protein precursor K10549 alsB; D-allose transport system substrate-binding protein D APECO1_2364 alsC; D-allose transport system permease protein AlsC K10550 alsC; D-allose transport system permease protein D APECO1_2363 alsA; D-allose transport ATP-binding protein AlsA K10551 alsA; D-allose transport system ATP-binding protein [EC:7.5.2.8] D APECO1_2712 rbsB; D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein D APECO1_3185 putative ribose ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D APECO1_2713 rbsC; ribose ABC transporter permease protein K10440 rbsC; ribose transport system permease protein D APECO1_3187 rbsC; putative ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D APECO1_2714 rbsA; fused D-ribose transporter subunits of ABC superfamily: ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APECO1_3186 rbsA; putative ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APECO1_2164 ytfQ; ABC transporter periplasmic binding protein YtfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein D APECO1_2162 ytfT; putative ABC transporter permease protein YtfT K23509 ytfT; galactofuranose transport system permease protein D APECO1_2161 yjfF; putative ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein D APECO1_2163 ytfR; putative ATP-binding component of a transport system K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D APECO1_3006 ugpB; glycerol-3-phosphate transporter subunit UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D APECO1_3007 ugpA; SN-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D APECO1_3008 ugpE; SN-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D APECO1_3009 ugpC; SN-glycerol-3-phosphate transport ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D APECO1_1518 ybbM; putative metal resistance protein K02069 STAR2; UDP-glucose/iron transport system permease protein D APECO1_1519 ybbL; putative ATP-binding component of a transport system K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D APECO1_3242 yrbD; putative ABC-type organic solvent transporter K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D APECO1_3241 yrbE; putative toluene transporter subunit: permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D APECO1_3240 yrbF; putative toluene transporter subunit: ATP-binding component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D APECO1_3243 yrbC; conserved hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D APECO1_463 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D APECO1_464 ycjO; putative binding-protein dependent transport protein K02025 ABC.MS.P; multiple sugar transport system permease protein D APECO1_465 ycjP; hypothetical ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein D APECO1_1665 putative periplasmic binding protein, probable substrate ribose K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D APECO1_1662 putative permease component of transport system K02057 ABC.SS.P; simple sugar transport system permease protein D APECO1_1663 putative permease component of transport system, probable substrate ribose K02057 ABC.SS.P; simple sugar transport system permease protein D APECO1_1664 putative ATP-binding component of transport system, probable substrate ribose K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D APECO1_2733 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein D APECO1_2734 pstC; high-affinity phosphate-specific transport system, cytoplasmic membrane component K02037 pstC; phosphate transport system permease protein D APECO1_2735 pstA; high-affinity phosphate-specific transport system, permease component K02038 pstA; phosphate transport system permease protein D APECO1_2736 pstB; high-affinity phosphate-specific transport system, ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D APECO1_2346 phnD; PhnD, subunit of alkylphosphonate ABC transporter K02044 phnD; phosphonate transport system substrate-binding protein D APECO1_2347 phnE; PhnE, subunit of alkylphosphonate ABC transporter K02042 phnE; phosphonate transport system permease protein D APECO1_2345 phnC; PhnC, phosphonate/organophosphate ester transporter subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D APECO1_4254 argT; lysine/arginine/ornithine transporter subunit K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APECO1_4257 hisM; histidine/lysine/arginine/ornithine transporter subunit K10015 hisM; histidine transport system permease protein D APECO1_4256 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein D APECO1_4258 hisP; ATP-binding component of histidine transport K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D APECO1_4255 hisJ; histidine/lysine/arginine/ornithine transporter subunit K10014 hisJ; histidine transport system substrate-binding protein D APECO1_1280 glnH; glutamine ABC transporter periplasmic-binding protein K10036 glnH; glutamine transport system substrate-binding protein D APECO1_1281 glnP; glutamine transport protein GlnP K10037 glnP; glutamine transport system permease protein D APECO1_1282 glnQ; glutamine ABC transporter ATP-binding component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D APECO1_1233 artJ; arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein D APECO1_1230 artI; arginine transporter subunit K09997 artI; arginine transport system substrate-binding protein D APECO1_1232 artM; arginine 3rd transport system permease protein K09998 artM; arginine transport system permease protein D APECO1_1231 artQ; arginine 3rd transport system permease protein K09999 artQ; arginine transport system permease protein D APECO1_1229 artP; arginine transport ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D APECO1_1408 ybeJ; Glutamate/aspartate Periplasmic binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APECO1_1410 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein D APECO1_1409 gltJ; glutamate and aspartate transporter subunit K10003 gltJ; glutamate/aspartate transport system permease protein D APECO1_1411 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APECO1_3172 yhdW; putative periplasmic amino-acid ABC transporter binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D APECO1_3171 yhdX; putative amino-acid ABC transporter permease protein yhdX K09970 aapQ; general L-amino acid transport system permease protein D APECO1_3170 yhdY; putative transport system permease protein K09971 aapM; general L-amino acid transport system permease protein D APECO1_3169 yhdZ; putative amino-acid ABC transporter ATP-binding protein yhdZ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D APECO1_961 fliY; cystine-binding periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein D APECO1_959 yecS; putative transport system permease protein K10009 tcyB; L-cystine transport system permease protein D APECO1_958 yecC; putative amino acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D APECO1_3001 livK; leucine transporter subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO1_2999 livJ; Leu/Ile/Val-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D APECO1_3002 livH; high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D APECO1_3003 livM; leucine/isoleucine/valine transporter subunit LivM K01998 livM; branched-chain amino acid transport system permease protein D APECO1_3004 livG; LivG, ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein D APECO1_3005 livF; ATP-binding component of leucine transport LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D APECO1_2792 nlpA; cytoplasmic membrane lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein D APECO1_1790 metQ; D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D APECO1_1789 metI; D-methionine transport system permease MetI K02072 metI; D-methionine transport system permease protein D APECO1_1788 metN; DL-methionine transporter subunit K02071 metN; D-methionine transport system ATP-binding protein D APECO1_483 mppA; periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D APECO1_358 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D APECO1_359 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein D APECO1_360 oppC; oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein D APECO1_361 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D APECO1_362 oppF; oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D APECO1_2904 dppA; dipeptide transporter protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D APECO1_2905 dppB; dipeptide transporter permease protein DppB K12369 dppB; dipeptide transport system permease protein D APECO1_2906 dppC; dipeptide transport system permease protein DppC K12370 dppC; dipeptide transport system permease protein D APECO1_2907 dppD; dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein D APECO1_2908 dppF; dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein D APECO1_457 sapA; peptide transport periplasmic protein SapA precursor K19226 sapA; cationic peptide transport system substrate-binding protein D APECO1_456 sapB; peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein D APECO1_455 sapC; ABC-type antimicrobial peptide transport system, permease component K19228 sapC; cationic peptide transport system permease protein D APECO1_454 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein D APECO1_453 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein D APECO1_2978 nikA; nickel-binding periplasmic protein precursor NikA K15584 nikA; nickel transport system substrate-binding protein D APECO1_2977 nikB; nickel transport system permease protein NikB K15585 nikB; nickel transport system permease protein D APECO1_2976 nikC; nickel transport system permease protein NikC K15586 nikC; nickel transport system permease protein D APECO1_2975 nikD; nickel transport ATP-binding protein NikD K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D APECO1_2974 nikE; nickel transport ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11] D APECO1_1263 yliB; predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily K13889 gsiB; glutathione transport system substrate-binding protein D APECO1_12632 yliB; predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily K13889 gsiB; glutathione transport system substrate-binding protein D APECO1_1262 yliC; predicted peptide transporter subunit: membrane component of ABC superfamily K13890 gsiC; glutathione transport system permease protein D APECO1_1261 yliD; predicted peptide transporter subunit: membrane component of ABC superfamily K13891 gsiD; glutathione transport system permease protein D APECO1_1264 yliA; fused predicted peptide transport subunits of ABC superfamily: ATP-binding component K13892 gsiA; glutathione transport system ATP-binding protein D APECO1_3399 ygiS; putative transporter subunit, periplasmic-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APECO1_2373 putative ABC transporter, periplasmic oligo-dipeptide/nickel binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APECO1_2374 yddR; putative ABC transporter permease protein YddR K02033 ABC.PE.P; peptide/nickel transport system permease protein D APECO1_2375 yddQ; putative ABC transporter permease protein YddQ K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APECO1_2376 yddP; putative ABC transporter transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APECO1_2377 yddO; putative ABC transporter ATP-binding protein YddO K02032 ddpF; peptide/nickel transport system ATP-binding protein D APECO1_4377 yejA; conserved hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D APECO1_4376 yejB; predicted oligopeptide transporter subunit K13894 yejB; microcin C transport system permease protein D APECO1_4375 yejE; putative oligopeptide transporter subunit K13895 yejE; microcin C transport system permease protein D APECO1_4374 yejF; putative ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D APECO1_1833 fhuD; iron-hydroxamate transporter subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D APECO1_1832 fhuB; fused iron-hydroxamate transporter subunits of ABC superfamily: membrane component K23228 fhuB; ferric hydroxamate transport system permease protein D APECO1_1834 fhuC; iron-hydroxamate transporter subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D APECO1_2947 chuT; putative periplasmic binding protein ChuT K25132 hmuT; heme transport system substrate-binding protein D APECO1_2943 chuU; putative permease of iron compound ABC transport system K25133 hmuU; heme transport system permease protein D APECO1_2942 putative ATP-binding protein of ABC transport system K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D APECO1_1457 fepB; ferric enterobactin (enterochelin) binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D APECO1_1459 fepD; ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein D APECO1_1460 fepG; ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D APECO1_1461 fepC; ferric enterobactin transport ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D APECO1_3388 putative iron compound-binding protein of ABC transporter family K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D APECO1_313 putative iron compound ABC transporter, periplasmic-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D APECO1_O1CoBM102 eitA; EitA K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D APECO1_3387 putative iron compound permease protein of ABC transporter family K02015 ABC.FEV.P; iron complex transport system permease protein D APECO1_3386 putative iron compound permease protein of ABC transporter family K02015 ABC.FEV.P; iron complex transport system permease protein D APECO1_312 putative iron compound ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D APECO1_O1CoBM101 eitB; EitB K02015 ABC.FEV.P; iron complex transport system permease protein D APECO1_311 putative iron compound ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D APECO1_3385 fepC; ferric enterobactin transport ATP-binding protein FepC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D APECO1_O1CoBM100 eitC; EitC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D APECO1_1827 yadT; vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D APECO1_786 btuC; vitamin B12 transporter subunit: membrane component of ABC superfamily K06073 btuC; vitamin B12 transport system permease protein D APECO1_784 btuC; vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D APECO1_907 znuA; adhesin-like protein K09815 znuA; zinc transport system substrate-binding protein D APECO1_909 znuB; ZnuB, subunit of ZnuA/ZnuB/ZnuC ABC transporter K09816 znuB; zinc transport system permease protein D APECO1_908 znuC; high-affinity zinc transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D APECO1_274 sitA; ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D APECO1_O1CoBM180 sitA; SitA K11604 sitA; manganese/iron transport system substrate-binding protein D APECO1_272 sitC; ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC K11605 sitC; manganese/iron transport system permease protein D APECO1_O1CoBM178 sitC; SitC K11605 sitC; manganese/iron transport system permease protein D APECO1_O1CoBM177 sitD; SitD K11606 sitD; manganese/iron transport system permease protein D APECO1_271 sitD; ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD K11606 sitD; manganese/iron transport system permease protein D APECO1_O1CoBM179 sitB; SitB K11607 sitB; manganese/iron transport system ATP-binding protein D APECO1_273 sitB; ABC Mn+2/Fe+2 transporter, ATPase subunit SitB K11607 sitB; manganese/iron transport system ATP-binding protein D APECO1_3604 conserved hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component D APECO1_3603 putative permease protein of ABC-type cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein D APECO1_3602 putative ATP-binding protein of ABC transport system K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D APECO1_3601 putative ATP-binding protein of ABC transport system K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D APECO1_3468 kpsM; polysialic acid transport protein KpsM K09688 kpsM; capsular polysaccharide transport system permease protein D APECO1_3481 kpsE; polysialic acid transport protein KpsE precursor K10107 kpsE; capsular polysaccharide transport system permease protein D APECO1_3469 kpsT; polysialic acid transport ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D APECO1_2133 conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D APECO1_3441 putative permease K07091 lptF; lipopolysaccharide export system permease protein D APECO1_2132 yjgQ; conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D APECO1_3442 putative permease K11720 lptG; lipopolysaccharide export system permease protein D APECO1_3234 yhbG; transporter subunit: ATP-binding component of ABC superfamily K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D APECO1_1298 ybhR; conserved hypothetical protein K25180 ybhR; drug efflux transport system permease protein D APECO1_1297 ybhS; conserved hypothetical protein K25181 ybhS; drug efflux transport system permease protein D APECO1_1296 ybhF; putative ABC-type transport protein YbhF K25182 ybhF; drug efflux transport system ATP-binding protein D APECO1_1295 ybhG; conserved hypothetical membrane protein ybhG K25183 ybhG; membrane fusion protein YbhG D APECO1_197 ycfU; ABC transporter integral membrane subunit K09808 lolC_E; lipoprotein-releasing system permease protein D APECO1_199 ycfW; ABC transporter integral membrane subunit K09808 lolC_E; lipoprotein-releasing system permease protein D APECO1_198 ycfV; ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D APECO1_4360 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C D APECO1_4359 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B D APECO1_4358 ccmA; heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D APECO1_2991 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D APECO1_2990 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APECO1_1857 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D APECO1_2965 yhhJ; predicted transporter subunit: membrane component of ABC superfamily K01992 ABC-2.P; ABC-2 type transport system permease protein D APECO1_1858 yadG; putative ABC transporter ATP-binding protein YadG K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D APECO1_1512 ybbP; conserved hypothetical protein YbbP K02004 ABC.CD.P; putative ABC transport system permease protein D APECO1_1513 ybbA; putative ABC-type transport protein YbbA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D APECO1_759 sufC; component of SufBCD complex, ATP-binding component of ABC superfamily K09013 sufC; Fe-S cluster assembly ATP-binding protein D APECO1_4136 yfeH; putative cytochrome oxidase K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D APECO1_743 mdtK; multidrug efflux system transporter K26939 norM; MATE family, multidrug efflux pump D APECO1_6020 yeeO; conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D APECO1_2425 dinF; DNA-damage-inducible SOS response protein DinF K26937 dinF; MATE family, multidrug efflux pump D APECO1_3578 galP; D-galactose transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D APECO1_3665 araE; arabinose transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D APECO1_1650 lacY; galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D APECO1_3730 fucP; L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D APECO1_4384 yeiO; sugar efflux transporter B K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D APECO1_3537 nupG; transport of nucleosides, permease protein K03289 nupG; MFS transporter, NHS family, nucleoside permease D APECO1_4139 xapB; xanthosine transporter K11537 xapB; MFS transporter, NHS family, xanthosine permease D APECO1_3945 kgtP; alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D APECO1_2340 proP; proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D APECO1_1067 permease of the major facilitator superfamily K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D APECO1_2584 putative shikimate transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D APECO1_2419 putative transmembrane transport protein K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D APECO1_2901 yhjX; putative transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D APECO1_3219 nanT; sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter D APECO1_3742 gudP; putative D-glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D APECO1_2187 putative hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D APECO1_3326 exuT; hexuronate transporter ExuT K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D APECO1_2766 dgoT; D-galactonate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D APECO1_3300 garP; putative (D)-galactarate transporter K12299 garP; MFS transporter, ACS family, probable galactarate transporter D APECO1_4315 yfaV; conserved hypothetical protein K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein D APECO1_767 ydiN; predicted transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter D APECO1_766 ydiM; predicted transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter D APECO1_857 yeaN; putative transport protein K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D APECO1_3989 hcaT; putative 3-phenylpropionic transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D APECO1_2786 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D APECO1_3510 pgtP; phosphoglycerate transporter protein PgtP K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein D APECO1_4321 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D APECO1_2785 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D APECO1_340 narK; nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APECO1_606 narU; nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APECO1_3671 ygeD; conserved hypothetical protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D APECO1_1458 ybdA; putative transporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D APECO1_1578 ampG; AmpG muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D APECO1_O1R83 tetA; TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D APECO1_452 putative membrane transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D APECO1_4373 bcr; bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D APECO1_2779 emrD; multidrug efflux system protein K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D APECO1_1614 araJ; AraJ MFS transporter K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein D APECO1_646 sotB; sugar efflux transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D APECO1_1251 cmr; proton motive force efflux pump K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D APECO1_136 yceE; YceE K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D APECO1_147 yceL; YceL K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D APECO1_2750 mdtL; multidrug efflux system protein K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein D APECO1_2790 yicM; putative transporter YicM K03445 nepI; MFS transporter, DHA1 family, purine ribonucleoside efflux pump D APECO1_737 ydhP; putative transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D APECO1_3837 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D APECO1_491 putative transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D APECO1_883 yebQ; conserved hypothetical transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D APECO1_1167 yegB; putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D APECO1_4169 emrY; multidrug resistance protein Y K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein D APECO1_1536 fsr; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D APECO1_679 ynfM; putative transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D APECO1_2101 putative transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein D APECO1_1191 ycaD; conserved hypothetical protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D APECO1_1054 ybtX; conserved hypothetical protein K05373 ybtX; MFS transporter, putative signal transducer D APECO1_3092 yhfC; putative permease K06141 tsgA; MFS transporter, TsgA protein D APECO1_1937 yaaU; hypothetical metabolite transport protein YaaU K08368 yaaU; MFS transporter, putative metabolite transport protein D APECO1_3761 ygcS; putative metabolite transport protein YgcS K08368 yaaU; MFS transporter, putative metabolite transport protein D APECO1_844 ydjK; putative metabolite transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D APECO1_838 ydjE; putative metabolite transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D APECO1_4129 ptsI; phosphoenolpyruvate-protein phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D APECO1_3676 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D APECO1_2967 putative phosphotransferase system HPr enzyme K02784 ptsH; phosphocarrier protein HPr D APECO1_3229 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr D APECO1_4154 ypdD; putative phosphoenolpyruvate-protein phosphotransferase YpdD K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-] D APECO1_2519 ptsA; phosphoenolpyruvate-protein phosphotransferase PtsA K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-] D APECO1_4385 fructose-specific PTS system IIA component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D APECO1_2105 pptE; putative phosphoenolpyruvate-protein phosphoryltransferase PptE K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D APECO1_4128 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APECO1_182 ptsG; fused glucose-specific PTS enzyme IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APECO1_2642 PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D APECO1_1393 nagE; fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB, and IIA components K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APECO1_3690 PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_704 malX; PTS system, maltose and glucose-specific IIABC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APECO1_2739 bglF; PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D APECO1_3811 ascF; PTS enzyme II-asc K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D APECO1_2152 treB; TreB, trehalose specific PTS system enzyme II K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APECO1_4118 yfeV; putative PTS system IIBC component YfeV K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D APECO1_2799 putative phosphotransferase system (PTS), fructose-specific K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D APECO1_4387 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO1_2801 putative PTS enzyme-II fructose K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APECO1_2800 PTS system, fructose-like-2 IIB component 1 K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D APECO1_4150 ypdH; putative PTS system IIB component YpdH K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D APECO1_2514 frwD; predicted enzyme IIB component of PTS K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D APECO1_4151 ypdG; putative enzyme IIC component of PTS K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D APECO1_2518 fruA; PTS system, fructose-like-2 IIC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D APECO1_3596 cmtB; PTS system, mannitol-specific enzyme II component, cryptic K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D APECO1_3597 cmtA; PTS system, mannitol (cryptic)-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO1_2858 mtlA; fused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APECO1_805 celC; CelC K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO1_652 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APECO1_807 celA; PEP-dependent phosphotransferase enzyme IV K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO1_654 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APECO1_806 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D APECO1_653 conserved hypothetical protein K02761 celB; cellobiose PTS system EIIC component D APECO1_3822 srlB; PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D APECO1_3823 srlE; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D APECO1_3824 srlA; PTS system, glucitol/sorbitol-specific IIC2 component K02783 srlA; glucitol/sorbitol PTS system EIIC component D APECO1_2971 putative phosphotransferase system enzyme subunit K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO1_4451 gatA; galactitol-specific enzyme IIA of phosphotransferase system K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D APECO1_2970 putative phosphotransferase system enzyme subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO1_4452 gatB; galactitol-specific enzyme IIB component of PTS K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D APECO1_4453 gatC; galactitol-specific enzyme IIC component of PTS K02775 gatC; galactitol PTS system EIIC component D APECO1_2969 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D APECO1_874 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APECO1_875 manY; mannose-specific enzyme IIC K02795 manY; mannose PTS system EIIC component D APECO1_876 manZ; PTS enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component D APECO1_2449 putative sorbose PTS component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D APECO1_2450 PTS system, sorbose-specific IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D APECO1_2451 sorA; putative sorbose-permease PTS system IIC component SorA K02814 sorA; sorbose PTS system EIIC component D APECO1_2452 PTS system, mannose-specific IID component K02815 sorM; sorbose PTS system EIID component D APECO1_3293 agaF; putative phosphotransferase system enzyme subunit K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D APECO1_3296 agaV; N-acetylgalactosamine-specific enzyme IIB component of PTS K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D APECO1_3295 putative phosphotransferase system enzyme subunit K02746 agaW; N-acetylgalactosamine PTS system EIIC component D APECO1_3294 PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component D APECO1_3289 agaB; N-acetylgalactosamine-specific enzyme IIB component of PTS K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D APECO1_3288 agaC; PTS system, N-acetylgalactosamine-specific IIC component 1 K10985 agaC; galactosamine PTS system EIIC component D APECO1_3287 agaD; N-acetylglucosamine transport enzyme IID component 1 K10986 agaD; galactosamine PTS system EIID component D APECO1_2998 conserved hypothetical protein K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D APECO1_2997 conserved hypothetical protein K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D APECO1_2996 conserved hypothetical protein K17466 dgaC; D-glucosaminate PTS system EIIC component D APECO1_2995 conserved hypothetical protein K17467 dgaD; D-glucosaminate PTS system EIID component D APECO1_2199 sgaT; putative transport protein SgaT K03475 ulaA; ascorbate PTS system EIIC component D APECO1_3231 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D APECO1_315 ycgC; putative phosphoenolpyruvate kinase (PTS system EI component in bacteria) K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D APECO1_1219 aqpZ; Aquaporin Z K06188 aqpZ; aquaporin Z D APECO1_2542 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D APECO1_366 kch; putative potassium channel protein K10716 kch; voltage-gated potassium channel D APECO1_1560 amtB; putative ammonium transporter K03320 amt; ammonium transporter, Amt family D APECO1_718 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO1_1255 yliJ; predicted glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO1_4263 yfcF; putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APECO1_3215 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D APECO1_4292 yfbK; conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D APECO1_75 yccA; inner membrane protein K19416 yccA; modulator of FtsH protease D APECO1_16 focA; formate transporter K06212 focA; formate transporter D APECO1_3089 nirC; nitrite transporter K02598 nirC; nitrite transporter D APECO1_3156 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D APECO1_1549 kefA; mechanosensitive channel protein KefA K05802 mscK; potassium-dependent mechanosensitive channel D APECO1_2230 yjeP; predicted mechanosensitive channel K22051 mscM; miniconductance mechanosensitive channel D APECO1_3609 mscS; mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D APECO1_1283 ybiO; putative membrane protein YbiO K22044 ybiO; moderate conductance mechanosensitive channel D APECO1_484 ynaI; hypothetical protein YnaI K16052 ynaI; MscS family membrane protein D APECO1_1471 ybdG; conserved hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel D APECO1_938 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO1_937 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D APECO1_1739 mbhA; putative motility protein MbhA K02557 motB; chemotaxis protein MotB D APECO1_3418 exbB; membrane spanning protein in TonB-ExbB-ExbD complex K03561 exbB; biopolymer transport protein ExbB D APECO1_3419 exbD; membrane spanning protein in TonB-ExbB-ExbD complex K03559 exbD; biopolymer transport protein ExbD D APECO1_1344 tolQ; TolQ protein K03562 tolQ; biopolymer transport protein TolQ D APECO1_1343 biopolymer transport protein K03560 tolR; biopolymer transport protein TolR D APECO1_2660 corA; magnesium/nickel/cobalt transporter CorA K03284 corA; magnesium transporter D APECO1_494 ydaN; zinc transporter K16074 zntB; zinc transporter D APECO1_1429 crcB; camphor resistance protein CrcB K06199 crcB; fluoride exporter D APECO1_O1CoBM174 crcB; CrcB K06199 crcB; fluoride exporter D APECO1_640 conserved hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D APECO1_2170 ytfL; putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APECO1_3921 putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D APECO1_41 ompF; OmpF K09476 ompF; outer membrane pore protein F D APECO1_1001 ompN; Outer membrane protein N precursor K09476 ompF; outer membrane pore protein F D APECO1_1728 phoE; outer membrane pore protein E precursor K11929 phoE; outer membrane pore protein E D APECO1_4344 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C D APECO1_972 nmpC; outer membrane porin protein NmpC precursor K16076 nmpC; outer membrane porin protein LC D APECO1_241 nmpC; outer membrane porin protein NmpC precursor K16076 nmpC; outer membrane porin protein LC D APECO1_550 ompN; outer membrane pore protein N, non-specific K14062 ompN; outer membrane protein N D APECO1_2432 lamB; maltoporin precursor K02024 lamB; maltoporin D APECO1_2741 bglH; carbohydrate-specific outer membrane porin, cryptic K10124 bglH; carbohydrate-specific outer membrane porin D APECO1_651 yieC; putative outer membrane protein YieC precursor K10124 bglH; carbohydrate-specific outer membrane porin D APECO1_62 ompA; OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family D APECO1_1277 ompX; outer membrane protein X precursor K11934 ompX; outer membrane protein X D APECO1_4221 fadL; bifunctional long-chain fatty acids transporter K06076 fadL; long-chain fatty acid transport protein D APECO1_1599 tsx; nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D APECO1_2530 tsx; nucleoside-specific channel-forming protein Tsx precursor K05517 tsx; nucleoside-specific channel-forming protein D APECO1_632 outer membrane usher protein FimD precursor K07347 fimD; outer membrane usher protein D APECO1_2113 fimD; outer membrane usher protein FimD precursor K07347 fimD; outer membrane usher protein D APECO1_1846 htrE; outer membrane usher protein HtrE precursor K07347 fimD; outer membrane usher protein D APECO1_3032 aufC; outer membrane usher protein precursor AufC K07347 fimD; outer membrane usher protein D APECO1_4437 yehB; putative outer membrane usher protein YehB precursor K07347 fimD; outer membrane usher protein D APECO1_O1CoBM96 conserved hypothetical protein K12678 aidA-I; autotransporter family porin D APECO1_4327 putative exoprotein involved in heme utilization or adhesion K07279 yfaL; autotransporter family porin D APECO1_1712 vat; vacuolating autotransporter K12684 esp; serine protease autotransporter [EC:3.4.21.-] D APECO1_O1CoBM73 tsh; Tsh K12684 esp; serine protease autotransporter [EC:3.4.21.-] D APECO1_557 entS; EntS/YbdA MFS transporter K12516 bigA; putative surface-exposed virulence protein D APECO1_O1CoBM137 iroN; IroN K19611 fepA; ferric enterobactin receptor D APECO1_1465 fepA; ferrienterobactin receptor precursor K19611 fepA; ferric enterobactin receptor D APECO1_1286 ybiL; putative tonB-dependent receptor YbiL precursor K16090 fiu; catecholate siderophore receptor D APECO1_2497 btuB; vitamin B12/cobalamin outer membrane transporter K16092 btuB; vitamin B12 transporter D APECO1_1063 fyuA; pesticin/yersiniabactin receptor protein K15721 fyuA; pesticin/yersiniabactin receptor D APECO1_183 fhuE; ferric-rhodotorulic acid outer membrane transporter K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D APECO1_3497 ireA; iron-regulated element K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D APECO1_4396 cirA; ferric iron-catecholate outer membrane transporter K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D APECO1_2948 chuA; outer membrane heme/hemoglobin receptor ChuA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D APECO1_308 prrA; putative outer membrane receptor, probably TonB dependent K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APECO1_591 yncD; predicted iron outer membrane transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APECO1_3384 putative iron compound receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APECO1_1835 fhuA; ferrichrome outer membrane transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APECO1_O1CoBM168 iutA; IutA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APECO1_1476 cusC; probable outer membrane lipoprotein CusC precursor K07796 cusC; outer membrane protein, copper/silver efflux system D APECO1_O1R111 silC; SilC K07796 cusC; outer membrane protein, copper/silver efflux system D APECO1_3378 tolC; TolC outer membrane-associated protein K12340 tolC; outer membrane protein D APECO1_451 putative outer membrane channel protein K18139 oprM; outer membrane protein, multidrug efflux system D APECO1_2371 yjcP; putative multidrug efflux system component K15550 mdtP; outer membrane protein, multidrug efflux system D APECO1_1152 wza; putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D APECO1_472 ompG; outer membrane protein G precursor K14053 ompG; outer membrane protein G D APECO1_698 uidC; membrane-associated protein UidC precursor K16140 uidC; putative glucuronide porin D APECO1_1810 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D APECO1_4012 yfgL; putative dehydrogenase K17713 bamB; outer membrane protein assembly factor BamB D APECO1_4080 nlpB; lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D APECO1_3935 yfiO; putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D APECO1_3917 smpA; small membrane lipoprotein K06186 bamE; outer membrane protein assembly factor BamE D APECO1_2168 ytfM; putative outer membrane protein and surface antigen K07278 tamA; translocation and assembly module TamA D APECO1_2167 ytfN; conserved hypothetical protein YtfN K09800 tamB; translocation and assembly module TamB D APECO1_2120 yjhA; conserved hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein D APECO1_2853 yadA; putative autotransporter/adhesin K21449 ata; trimeric autotransporter adhesin D APECO1_3235 yhbN; putative transporter subunit: periplasmic-binding component of ABC superfamily K09774 lptA; lipopolysaccharide export system protein LptA D APECO1_3236 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D APECO1_1928 imp; organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein D APECO1_1414 rlpB; minor lipoprotein K03643 lptE; LPS-assembly lipoprotein D APECO1_2918 yhjL; cellulose synthase operon protein C K20543 bcsC; cellulose synthase operon protein C D APECO1_1405 ybeX; putative transport protein K06189 corC; hemolysin (HlyC) family protein D APECO1_2390 putative murein hydrolase exporter (LrgA family) K06518 cidA; holin-like protein D APECO1_4409 yohJ; conserved hypothetical protein K06518 cidA; holin-like protein D APECO1_2289 pduA; putative propanediol utilization protein PduA K27260 pduA; bacterial microcompartment shell protein D APECO1_4100 eutM; putative detox protein in ethanolamine utilization K04027 eutM; ethanolamine utilization protein EutM D APECO1_699 uidB; glucuronide carrier protein K16139 uidB; glucuronide carrier protein D APECO1_1472 pheP; phenylalanine-specific permease K11732 pheP; phenylalanine-specific permease D APECO1_4395 lysP; lysien specific permease K11733 lysP; lysine-specific permease D APECO1_1877 aroP; aromatic amino acid transporter K11734 aroP; aromatic amino acid transport protein AroP D APECO1_3857 gabP; GABA permease K11735 gabP; GABA permease D APECO1_1608 proY; proline permease transport protein K11736 proY; proline-specific permease ProY D APECO1_2178 cycA; transport of D-alanine, D-serine, and glycine K11737 cycA; D-serine/D-alanine/glycine transporter D APECO1_593 ansP; L-asparagine permease K11738 ansP; L-asparagine permease D APECO1_1375 potE; putrescine transport protein K03756 potE; putrescine:ornithine antiporter D APECO1_2321 cadB; transport of lysine/cadaverine K03757 cadB; cadaverine:lysine antiporter D APECO1_2265 putative antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D APECO1_2263 putative amino acid antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D APECO1_688 ydgI; putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D APECO1_2336 yjdE; putative amino acid/amine transport protein, cryptic K03759 adiC; arginine:agmatine antiporter D APECO1_620 xasA; amino acid antiporter K20265 gadC; glutamate:GABA antiporter D APECO1_2248 yjeH; conserved hypothetical protein K16263 yjeH; amino acid efflux transporter D APECO1_1336 ybgR; zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein D APECO1_2554 fieF; ferrous iron efflux protein F K13283 fieF; ferrous-iron efflux pump FieF D APECO1_3371 ygiE; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D APECO1_1473 cusA; copper/silver efflux system, membrane component K07787 cusA; copper/silver efflux system protein D APECO1_O1R114 silA; SilA K07787 cusA; copper/silver efflux system protein D APECO1_2934 mdtF; putative multidrug transporter MdtF, RpoS-dependent K18899 mdtF; multidrug efflux pump D APECO1_1552 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump D APECO1_450 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D APECO1_4087 acrD; aminoglycoside/multidrug efflux system K18324 acrD; multidrug efflux pump D APECO1_3173 acrF; acriflavine resistance protein F K18142 acrF; multidrug efflux pump D APECO1_1165 yegN; conserved hypothetical protein K07788 mdtB; multidrug efflux pump D APECO1_1166 yegO; conserved hypothetical protein K07789 mdtC; multidrug efflux pump D APECO1_975 emrE; multidrug efflux protein K03297 emrE; small multidrug resistance pump D APECO1_O1R94 qacEdelta1; quaternary ammonium compound resistance protein K18975 ebr; small multidrug resistance pump D APECO1_2241 sugE; SugE SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D APECO1_682 putative chaperone K11742 mdtI; spermidine export protein MdtI D APECO1_683 ydgF; putative chaperone K11743 mdtJ; spermidine export protein MdtJ D APECO1_656 ydeD; probable amino acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter D APECO1_1278 ybiF; Hypothetical transport protein ybiF K11939 rhtA; inner membrane transporter RhtA D APECO1_2561 rhaT; L-rhamnose:proton symporter K02856 rhaT; L-rhamnose-H+ transport protein D APECO1_2657 rarD; putative chloramphenical resistance permease K05786 rarD; chloramphenicol-sensitive protein RarD D APECO1_588 ydcZ; conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APECO1_1078 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APECO1_665 ynfA; conserved hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D APECO1_2129 idnT; L-idonate and D-gluconate transporter K06157 idnT; Gnt-II system L-idonate transporter D APECO1_3051 gntT; high-affinity transport permease for gluconate K06155 gntT; Gnt-I system high-affinity gluconate transporter D APECO1_4171 dsdX; DsdX permease K13629 dsdX; D-serine transporter D APECO1_3022 gntU; gluconate transporter GntU, low affinity GNT 1 system K06156 gntU; Gnt-I system low-affinity gluconate transporter D APECO1_37842 ygbN; conserved hypothetical protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D APECO1_2559 kdgT; 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D APECO1_2251 dcuA; anaerobic dicarboxylate transport K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D APECO1_2329 dcuB; anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D APECO1_2852 lldP; L-lactate permease K00427 lldP; L-lactate permease D APECO1_3452 yghK; glycolate transporter K02550 glcA; glycolate permease D APECO1_1676 betT; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein D APECO1_1941 caiT; L-carnitine/gamma-butyrobetaine antiporter K05245 caiT; L-carnitine/gamma-butyrobetaine antiporter D APECO1_575 tehA; tellurite resistance protein TehA K03304 tehA; tellurite resistance protein D APECO1_333 chaA; calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter D APECO1_3239 yrbG; putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter D APECO1_3434 pitB; putative low-affinity inorganic phosphate transporter 2 K16322 pit; low-affinity inorganic phosphate transporter D APECO1_2960 pitA; phosphate transporter, low-affinity K16322 pit; low-affinity inorganic phosphate transporter D APECO1_3180 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter D APECO1_106 putP; proline:sodium symporter K11928 putP; sodium/proline symporter D APECO1_2388 yjcG; putative symporter YjcG K14393 actP; cation/acetate symporter D APECO1_2379 gltP; GltP, glutamate-aspartate symport protein K11102 gltP; proton glutamate symport protein D APECO1_2920 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D APECO1_3330 ygjU; putative symporter YgjU K07862 sstT; serine/threonine transporter D APECO1_2808 glutamate transport protein K03312 gltS; glutamate:Na+ symporter, ESS family D APECO1_1960 nhaA; Na+/H antiporter, pH dependent K03313 nhaA; Na+:H+ antiporter, NhaA family D APECO1_298 nhaB; Na(+)/H(+) antiporter 2 K03314 nhaB; Na+:H+ antiporter, NhaB family D APECO1_2092 ibeT; putative transporter IbeT K03315 nhaC; Na+:H+ antiporter, NhaC family D APECO1_2068 yjcE; putative Na(+)/H(+) exchanger YjcE K24163 nhaK; monovalent cation/hydrogen antiporter D APECO1_2392 yjcE; putative sodium/hydrogen exchanger family protein YjcE K24163 nhaK; monovalent cation/hydrogen antiporter D APECO1_303 ycgO; putative Na(+)/H(+) exchanger YcgO K11105 cvrA; potassium/hydrogen antiporter D APECO1_1935 kefC; glutathione-regulated potassium-efflux system protein K11745 kefC; glutathione-regulated potassium-efflux system protein KefC D APECO1_1936 yabF; glutathione-regulated potassium-efflux system ancillary protein K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF D APECO1_3104 kefB; glutathione-regulated potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D APECO1_3103 yheR; putative NAD(P)H oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D APECO1_1537 ybaL; predicted transporter with NAD(P)-binding Rossmann-fold domain K26735 KEA4_5_6; K+:H+ antiporter D APECO1_2608 trkH; trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein D APECO1_516 trkG; Rac prophage; potassium transporter subunit K03498 trkH; trk/ktr system potassium uptake protein D APECO1_3157 trkA; transport of potassium K03499 trkA; trk/ktr system potassium uptake protein D APECO1_1653 codB; cytosine permease K10974 codB; cytosine permease D APECO1_2638 putative permease for cytosine/purines, uracil, thiamine, allantoin K10974 codB; cytosine permease D APECO1_1504 ybbW; putative allantoin transporter K10975 allP; allantoin permease D APECO1_4072 uraA; uracil permease transporter K02824 uraA; uracil permease D APECO1_3639 ygfU; putative purine permease YgfU K24206 uacT; uric acid transporter D APECO1_2807 yicE; putative purine permease YicE K16345 xanP; xanthine permease XanP D APECO1_3644 ygfO; predicted transporter K16346 xanQ; xanthine permease XanQ D APECO1_3642 ygfQ; putative transporter K06901 pbuG; adenine/guanine/hypoxanthine permease D APECO1_2788 yicO; predicted xanthine/uracil permase YicO K06901 pbuG; adenine/guanine/hypoxanthine permease D APECO1_2746 yieG; putative membrane/transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease D APECO1_2393 yjcD; putative xanthine/uracil permeases family protein YjcD K06901 pbuG; adenine/guanine/hypoxanthine permease D APECO1_4145 nupC; putative permease of transport system for 3 nucleosides K11535 nupC; nucleoside transport protein D APECO1_4390 yeiM; putative nucleoside transporter K16324 psuT; putative pseudouridine transporter D APECO1_952 tyrP; tyrosine-specific transport system K03834 tyrP; tyrosine-specific transport protein D APECO1_3269 mtr; tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein D APECO1_2751 tnaB; low affinity tryptophan permease K03836 tnaB; low affinity tryptophan permease D APECO1_3735 sdaC; putative serine transporter K03837 sdaC; serine transporter D APECO1_3308 tdcC; L-threonine/L-serine transporter K03838 tdcC; threonine transporter D APECO1_2909 yhjV; conserved hypothetical protein K26603 yhjV; inner membrane transport protein D APECO1_3313 putative amino acid permease K26604 cyuP; cysteine uptake transport protein D APECO1_578 ydcO; conserved hypothetical protein K05782 benE; benzoate membrane transport protein D APECO1_1439 ybdS; citrate carrier/transporter K09477 citT; citrate:succinate antiporter D APECO1_3351 ygjE; putative tartrate:succinate antiporter K11106 ttdT; L-tartrate/succinate antiporter D APECO1_675 ynfJ; putative chloride channel protein EriC-like K03281 clcA; chloride channel protein, CIC family D APECO1_1830 yadQ; chloride channel protein K03281 clcA; chloride channel protein, CIC family D APECO1_4148 yfeO; conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family D APECO1_322 ychM; putative sulfate transporter YchM K03321 TC.SULP; sulfate permease, SulP family D APECO1_4146 mntH; manganese transport protein MntH K03322 mntH; manganese transport protein D APECO1_2872 putative DedA family, membrane protein K21393 yiaN; TRAP-type transport system large permease protein D APECO1_2871 yiaO; putative bacterial extracellular solute-binding protein YiaO K21395 yiaO; TRAP-type transport system periplasmic protein D APECO1_2069 C4-dicarboxylate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D APECO1_2455 yjbB; conserved hypothetical protein K03324 yjbB; phosphate:Na+ symporter D APECO1_1431 dcuC; anaerobic C4-dicarboxylate transporter dcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D APECO1_2683 wzxE; O-antigen translocase K16693 wzxE; enterobacterial common antigen flippase D APECO1_1136 wzxC; lipopolysaccharide biosynthesis protein K16695 wzxC; lipopolysaccharide exporter D APECO1_151 mviN; MviN K03980 murJ; putative peptidoglycan lipid II flippase D APECO1_4164 yfdV; putative transporter protein K13936 mdcF; malonate transporter and related proteins D APECO1_2716 trkD; putative potassium transporter TrkD K03549 kup; KUP system potassium uptake protein D APECO1_3610 yggA; conserved hypothetical protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D APECO1_2652 rhtB; neutral amino-acid efflux system K05834 rhtB; homoserine/homoserine lactone efflux protein D APECO1_2653 rhtC; threonine efflux system protein RhtC K05835 rhtC; threonine efflux protein D APECO1_1660 yahN; putative cytochrome subunit of dehydrogenase K03329 yahN; amino acid exporter D APECO1_3954 yfiK; putative threonine efflux protein K11249 eamB; cysteine/O-acetylserine efflux protein D APECO1_861 yeaS; conserved hypothetical protein K11250 leuE; leucine efflux protein D APECO1_3840 ygaZ; conserved hypothetical protein K26605 azlC; branched chain amino acid efflux pump D APECO1_3839 ygaH; conserved hypothetical protein K26606 azlD; branched chain amino acid efflux pump D APECO1_2629 conserved membrane protein K07793 tctA; putative tricarboxylic transport membrane protein D APECO1_2628 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D APECO1_2627 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D APECO1_3204 yhcP; conserved hypothetical protein K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB D APECO1_2370 yjcQ; putative multidrug efflux system component K15547 mdtO; multidrug resistance protein MdtO D APECO1_4076 yfgO; putative permease PerM K03548 perM; putative permease D APECO1_2983 yhhQ; conserved inner membrane protein K09125 yhhQ; queuosine precursor transporter D APECO1_647 marC; Multiple antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein D APECO1_1897 ftsW; cell division; membrane protein involved in shape determination K03588 ftsW; cell division protein FtsW D APECO1_878 yebN; conserved inner membrane protein K23242 mntP; manganese efflux pump family protein D APECO1_107 ycdN; conserved hypothetical protein K07243 FTR; high-affinity iron transporter D APECO1_108 ycdO; conserved hypothetical protein YcdO K07224 efeO; iron uptake system component EfeO D APECO1_110 ycdB; conserved hypothetical protein YcdB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D APECO1_4440 yohL; conserved hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein D APECO1_2073 yjiY; putative carbon starvation protein K23676 btsT; pyruvate/proton symporter D APECO1_368 tonB; TonB protein K03832 tonB; periplasmic protein TonB D APECO1_245 tonB; truncated TonB-like membrane protein encoded within prophage K03832 tonB; periplasmic protein TonB D APECO1_1340 pal; peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein D APECO1_1342 tolA; membrane spanning protein TolA K03646 tolA; colicin import membrane protein D APECO1_1341 tolB; TolB protein precursor K03641 tolB; TolB protein D APECO1_341 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO1_605 narZ; respiratory nitrate reductase 2 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APECO1_342 narH; nitrate reductase 1, beta (Fe-S) subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO1_604 narY; cryptic nitrate reductase 2, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APECO1_344 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO1_602 narV; respiratory nitrate reductase 2 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APECO1_609 fdnG; FdnG, alpha subunit of formate dehydrogenase-N K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APECO1_611 fdnI; formate dehydrogenase-N gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit D APECO1_673 ynfH; oxidoreductase, membrane subunit K07312 ynfH; Tat-targeted selenate reductase subunit YnfH D APECO1_672 dmsB; dimethyl sulfoxide reductase, anaerobic, subunit B K07311 ynfG; Tat-targeted selenate reductase subunit YnfG D APECO1_670 ynfE; putative dimethyl sulfoxide reductase chain YnfE precursor K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9] D APECO1_671 ynfF; putative dimethyl sulfoxide reductase chain YnfF precursor K07310 ynfF; Tat-targeted selenate reductase subunit YnfF [EC:1.97.1.9] D APECO1_1195 dmsA; Anaerobic dimethyl sulfoxide reductase chain A precursor K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D APECO1_1194 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D APECO1_1193 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C D APECO1_90 torA; trimethylamine-N-oxide reductase 1 precursor K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO1_89 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D APECO1_91 torD; chaperone protein TorD K03533 torD; TorA specific chaperone D APECO1_923 torY; TMAO reductase III (TorYZ), cytochrome c-type subunit K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY D APECO1_922 bisZ; trimethylamine-N-oxide reductase 2 precursor K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D APECO1_2897 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D APECO1_749 ydhU; putative cytochrome K08354 phsC; thiosulfate reductase cytochrome b subunit D APECO1_490 hlyD; putative secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D APECO1_2369 yjcR; putative membrane fusion protein of efflux pump K15549 mdtN; membrane fusion protein, multidrug efflux system D APECO1_1474 cusB; copper/silver efflux system, membrane fusion protein K07798 cusB; membrane fusion protein, copper/silver efflux system D APECO1_O1R113 silB; SilB K07798 cusB; membrane fusion protein, copper/silver efflux system D APECO1_O1CoBM124 cvaA; CvaA K13408 cvaA; membrane fusion protein D APECO1_2935 mdtE; multidrug resistance efflux transporter K18898 mdtE; membrane fusion protein, multidrug efflux system D APECO1_449 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_1551 acrA; acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_3174 acrE; acriflavine resistance protein E K18141 acrE; membrane fusion protein, multidrug efflux system D APECO1_1164 yegM; conserved hypothetical protein K07799 mdtA; membrane fusion protein, multidrug efflux system D APECO1_1216 macA; macrolide-specific efflux protein MacA precursor K13888 macA; membrane fusion protein, macrolide-specific efflux system D APECO1_O1CoBM197 etsA; EtsA K13888 macA; membrane fusion protein, macrolide-specific efflux system D APECO1_3203 yhcQ; conserved hypothetical protein K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA D APECO1_1150 wzc; protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APECO1_2413 putative transporter K03811 pnuC; nicotinamide mononucleotide transporter D APECO1_1337 pnuC; conserved hypothetical protein PnuC K03811 pnuC; nicotinamide mononucleotide transporter D APECO1_3056 feoB; ferrous iron transport protein B (FeoB) K04759 feoB; ferrous iron transport protein B D APECO1_1631 sbmA; SbmA protein K17938 sbmA; peptide/bleomycin uptake transporter D APECO1_2959 uspB; universal stress protein UspB K06144 uspB; universal stress protein B D APECO1_4362 ccmF; heme lyase, CcmF subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D APECO1_2941 yhiD; putative Mg(2+) transport ATPase inner membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D APECO1_1005 yedX; conserved hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D APECO1_893 yebZ; conserved hypothetical protein K07245 pcoD; copper resistance protein D D APECO1_O1R121 pcoD; PcoD K07245 pcoD; copper resistance protein D D APECO1_O1R120 pcoC; PcoC K07156 copC; copper resistance protein C D APECO1_850 yeaF; MltA-interacting protein precursor K07274 mipA; MipA family protein C 02044 Secretion system [BR:ecv02044] D APECO1_3378 tolC; TolC outer membrane-associated protein K12340 tolC; outer membrane protein D APECO1_O1CoBM124 cvaA; CvaA K13408 cvaA; membrane fusion protein D APECO1_3128 hofC; putative general secretion pathway protein C K02452 gspC; general secretion pathway protein C D APECO1_3457 gspC; putative type II secretion protein GspC K02452 gspC; general secretion pathway protein C D APECO1_3458 gspD; putative type II secretion protein GspD K02453 gspD; general secretion pathway protein D D APECO1_3127 hofD; putative general secretion pathway protein D precursor K02453 gspD; general secretion pathway protein D D APECO1_3459 gspE; putative type II secretion protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APECO1_3126 hofE; putative general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APECO1_3460 gspF; putative type II secretion protein GspF K02455 gspF; general secretion pathway protein F D APECO1_3125 hofF; putative general secretion pathway protein F K02455 gspF; general secretion pathway protein F D APECO1_3461 gspG; putative type II secretion protein GspG K02456 gspG; general secretion pathway protein G D APECO1_3124 hofG; putative general secretion pathway protein G precursor K02456 gspG; general secretion pathway protein G D APECO1_3462 gspH; putative type II secretion protein GspH K02457 gspH; general secretion pathway protein H D APECO1_3123 hofH; putative general secretion pathway protein H precursor K02457 gspH; general secretion pathway protein H D APECO1_3122 hofI; putative general secretion pathway protein I precursor K02458 gspI; general secretion pathway protein I D APECO1_3463 gspI; putative type II secretion protein GspI K02458 gspI; general secretion pathway protein I D APECO1_3121 hofJ; putative general secretion pathway protein J precursor K02459 gspJ; general secretion pathway protein J D APECO1_3464 gspJ; putative type II secretion protein GspJ K02459 gspJ; general secretion pathway protein J D APECO1_3120 hofK; putative general secretion pathway protein K K02460 gspK; general secretion pathway protein K D APECO1_3465 gspK; putative type II secretion protein GspK K02460 gspK; general secretion pathway protein K D APECO1_3119 yheK; putative general secretion pathway protein L K02461 gspL; general secretion pathway protein L D APECO1_3466 gspL; putative type II secretion protein GspL K02461 gspL; general secretion pathway protein L D APECO1_3467 gspM; putative secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D APECO1_3118 pshM; putative general secretion pathway protein M K02462 gspM; general secretion pathway protein M D APECO1_3117 hofD; type 4 prepilin-like proteins leader peptide processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APECO1_3455 pppA; putative prepilin peptidase A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D APECO1_3571 yggR; conserved hypothetical protein K02669 pilT; twitching motility protein PilT D APECO1_3679 ppdA; prepilin peptidase dependent protein A precursor K02679 ppdA; prepilin peptidase dependent protein A D APECO1_3680 ppdB; prepilin peptidase dependent protein B precursor K02680 ppdB; prepilin peptidase dependent protein B D APECO1_3682 ppdC; prepilin peptidase dependent protein C precursor K02681 ppdC; prepilin peptidase dependent protein C D APECO1_1881 pppD; predicted major pilin subunit K02682 ppdD; prepilin peptidase dependent protein D D APECO1_1882 hofB; conserved protein with nucleoside triphosphate hydrolase domain K02504 hofB; protein transport protein HofB D APECO1_1883 hofC; assembly protein in type IV pilin biogenesis, transmembrane protein K02505 hofC; protein transport protein HofC D APECO1_3069 yrfD; conserved hypothetical protein K12288 hofM; pilus assembly protein HofM D APECO1_3070 yrfC; conserved hypothetical protein K12289 hofN; pilus assembly protein HofN D APECO1_3071 yrfB; conserved hypothetical protein K12290 hofO; pilus assembly protein HofO D APECO1_3072 hofQ; putative transport protein HofQ precursor K02507 hofQ; protein transport protein HofQ D APECO1_3569 yggT; putative inner membrane protein K02221 yggT; YggT family protein D APECO1_1569 ybaV; conserved hypothetical protein K02237 comEA; competence protein ComEA D APECO1_25 ycaI; YcaI K02238 comEC; competence protein ComEC D APECO1_1740 fhiA; FhiA protein K02400 flhA; flagellar biosynthesis protein FlhA D APECO1_928 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO1_929 flhB; flagellar biosynthesis protein B K02401 flhB; flagellar biosynthesis protein FlhB D APECO1_977 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D APECO1_979 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH D APECO1_980 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APECO1_985 fliN; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D APECO1_986 fliO; flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ D APECO1_987 fliP; flagellar assembly protein FliP K02419 fliP; flagellar biosynthesis protein FliP D APECO1_988 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APECO1_989 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APECO1_O1CoBM53 traG; TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG D APECO1_O1R145 trhG; inner membrane protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D APECO1_O1CoBM46 traF; TraF K12057 traF; conjugal transfer pilus assembly protein TraF D APECO1_O1R147 trhF; pilus assembly protein K12057 traF; conjugal transfer pilus assembly protein TraF D APECO1_O1R29 trhN; TrhN K12058 traN; conjugal transfer mating pair stabilization protein TraN D APECO1_O1CoBM44 traN; TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN D APECO1_O1CoBM43 trbC; TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC D APECO1_O1R28 trhU; TrhU K12060 traU; conjugal transfer pilus assembly protein TraU D APECO1_O1CoBM42 traU; TraU K12060 traU; conjugal transfer pilus assembly protein TraU D APECO1_O1R27 trhW; TrhW K12061 traW; conjugal transfer pilus assembly protein TraW D APECO1_O1CoBM41 traW; TraW K12061 traW; conjugal transfer pilus assembly protein TraW D APECO1_O1CoBM40 trbI; TrbI K12062 trbI; conjugal transfer pilin signal peptidase TrbI D APECO1_O1R26 trhF; TrhF K12062 trbI; conjugal transfer pilin signal peptidase TrbI D APECO1_O1R11 trhC; TrhC K12063 traC; conjugal transfer ATP-binding protein TraC D APECO1_O1CoBM39 traC; TraC K12063 traC; conjugal transfer ATP-binding protein TraC D APECO1_O1CoBM37 traV; TraV K12064 traV; conjugal transfer pilus assembly protein TraV D APECO1_O1CoBM33 traB; TraB K12065 traB; conjugal transfer pilus assembly protein TraB D APECO1_O1R7 trhB; ThrB K12065 traB; conjugal transfer pilus assembly protein TraB D APECO1_O1R5 trhK; TrhK K12066 traK; conjugal transfer pilus assembly protein TraK D APECO1_O1CoBM32 traK; TraK K12066 traK; conjugal transfer pilus assembly protein TraK D APECO1_O1CoBM31 traE; TraE K12067 traE; conjugal transfer pilus assembly protein TraE D APECO1_O1R4 trhE; TrhE K12067 traE; conjugal transfer pilus assembly protein TraE D APECO1_O1CoBM30 traL; TraL K12068 traL; conjugal transfer pilus assembly protein TraL D APECO1_O1R3 trhL; TrhL K12068 traL; conjugal transfer pilus assembly protein TraL D APECO1_O1R152 traI; TraI K12070 traI; conjugal transfer pilus assembly protein TraI D APECO1_O1R153 traG; TraG K12071 traD; conjugal transfer pilus assembly protein TraD D APECO1_3634 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D APECO1_O1R141 dsbC; DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D APECO1_O1R146 trhH; pilus assembly protein K12072 traH; conjugative transfer pilus assembly protein TraH D APECO1_O1CoBM96 conserved hypothetical protein K12678 aidA-I; autotransporter family porin D APECO1_4327 putative exoprotein involved in heme utilization or adhesion K07279 yfaL; autotransporter family porin D APECO1_1712 vat; vacuolating autotransporter K12684 esp; serine protease autotransporter [EC:3.4.21.-] D APECO1_O1CoBM73 tsh; Tsh K12684 esp; serine protease autotransporter [EC:3.4.21.-] D APECO1_557 entS; EntS/YbdA MFS transporter K12516 bigA; putative surface-exposed virulence protein D APECO1_1770 aec30; conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL D APECO1_3705 conserved hypothetical protein K11891 impL; type VI secretion system protein ImpL D APECO1_1766 aec26; conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK D APECO1_3715 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK D APECO1_3716 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D APECO1_1765 aec25; conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D APECO1_1762 aec22; conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH D APECO1_3697 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH D APECO1_1761 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG D APECO1_3698 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG D APECO1_3717 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC D APECO1_1759 aec18; conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC D APECO1_1758 aec17; conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB D APECO1_3718 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB D APECO1_1757 aec16; conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D APECO1_3713 putative hemolysin-coregulated protein K11903 hcp; type VI secretion system secreted protein Hcp D APECO1_1756 aec15; conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO1_596 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO1_3711 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D APECO1_1760 aec19; conserved hypothetical protein K11905 K11905; type VI secretion system protein D APECO1_3695 conserved hypothetical protein K11905 K11905; type VI secretion system protein D APECO1_1764 aec24; conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD D APECO1_3696 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD D APECO1_1767 aec27; putative ATPase with chaperone activity K11907 vasG; type VI secretion system protein VasG D APECO1_3712 putative ATPases with chaperone activity, ATP-binding subunit K11907 vasG; type VI secretion system protein VasG D APECO1_3702 conserved hypothetical protein K11910 vasJ; type VI secretion system protein VasJ D APECO1_1769 aec29; conserved hypothetical protein K11910 vasJ; type VI secretion system protein VasJ D APECO1_1771 aec31; conserved hypothetical protein K11911 vasL; type VI secretion system protein VasL D APECO1_3694 conserved hypothetical protein K11911 vasL; type VI secretion system protein VasL D APECO1_1763 aec23; conserved hypothetical protein K11894 impI; type VI secretion system protein ImpI D APECO1_1768 aec28; conserved hypothetical protein K11909 vasI; type VI secretion system protein VasI D APECO1_634 fmlA; putative Fml fimbriae subunit K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO1_2116 fimA; type 1 fimbriae major subunit FimA K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO1_2114 fimC; type I fimbrial chaperone K07346 fimC; fimbrial chaperone protein D APECO1_633 chaperone protein fimC precursor K07346 fimC; fimbrial chaperone protein D APECO1_3031 fimbrial chaperone protein precursor K07346 fimC; fimbrial chaperone protein D APECO1_632 outer membrane usher protein FimD precursor K07347 fimD; outer membrane usher protein D APECO1_2113 fimD; outer membrane usher protein FimD precursor K07347 fimD; outer membrane usher protein D APECO1_1846 htrE; outer membrane usher protein HtrE precursor K07347 fimD; outer membrane usher protein D APECO1_3032 aufC; outer membrane usher protein precursor AufC K07347 fimD; outer membrane usher protein D APECO1_4437 yehB; putative outer membrane usher protein YehB precursor K07347 fimD; outer membrane usher protein D APECO1_2112 FimF protein precursor K07348 fimF; minor fimbrial subunit D APECO1_2111 fimA; P pilus assembly protein, pilin FimA K07349 fimG; minor fimbrial subunit D APECO1_630 ydeR; predicted fimbrial-like adhesin protein K07349 fimG; minor fimbrial subunit D APECO1_2110 fimH; type 1 fimbiral adhesin FimH K07350 fimH; minor fimbrial subunit D APECO1_3519 papA; major fibrial protein K12517 papA; major pilin subunit PapA D APECO1_3521 papC; outer membrane usher protein PapC K12518 papC; outer membrane usher protein PapC D APECO1_4228 yfcU; putative outer membrane usher YfcU precursor K12518 papC; outer membrane usher protein PapC D APECO1_3522 papD; pilus assembly protein chaperone PapD K12519 papD; chaperone protein PapD D APECO1_4229 yfcS; putative periplasmic chaperone YfcS precursor K12519 papD; chaperone protein PapD D APECO1_3525 papE; PapE protein K12520 papE; minor pilin subunit PapE D APECO1_3526 papF; P pilus minor tip component PapF K12521 papF; minor pilin subunit PapF D APECO1_3527 papG; PapG K12522 papG; adhesin PapG D APECO1_3524 papK; pilus assembly protein PapK K12523 papK; minor pilin subunit PapK D APECO1_1704 matB; Hypothetical protein yagZ precursor K21964 ecpA; Mat/Ecp fimbriae major subunit D APECO1_1705 yagY; Hypothetical protein yagY precursor K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone D APECO1_1706 yagX; hypothetical protein YagX precursor K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein D APECO1_1707 yagW; conserved hypothetical protein K21967 ecpD; Mat/Ecp fimbriae adhesin D APECO1_1708 yagV; conserved hypothetical protein K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone D APECO1_127 csgA; curlin major subunit CsgA K04334 csgA; major curlin subunit D APECO1_126 csgB; minor curlin subunit precursor CsgB K04335 csgB; minor curlin subunit D APECO1_128 csgC; putative curli production protein CsgC K04336 csgC; curli production protein D APECO1_124 csgE; assembly/transport component in curli production K04337 csgE; curli production assembly/transport component CsgE D APECO1_123 csgF; assembly/transport component in curli production K04338 csgF; curli production assembly/transport component CsgF D APECO1_122 csgG; assembly/transport component in curli production K06214 csgG; curli production assembly/transport component CsgG D APECO1_1888 secA; translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APECO1_2846 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D APECO1_1602 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D APECO1_2491 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D APECO1_1601 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D APECO1_3257 secG; putative export membrane protein K03075 secG; preprotein translocase subunit SecG D APECO1_1889 secM; SecA regulator SecM K13301 secM; secretion monitor D APECO1_3148 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY D APECO1_3923 ffh; signal recognition particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APECO1_2989 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D APECO1_1603 yajC; conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D APECO1_2754 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APECO1_2619 tatA; sec-independent twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D APECO1_2618 tatB; sec-independent translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D APECO1_2617 tatC; TatABCE protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ecv02042] D APECO1_542 cdtA; cytolethal distending toxin type IV subunit A K11013 cdtA; cytolethal distending toxin subunit A D APECO1_543 cdtB; cytolethal distending toxin type IV subunit B K11014 cdtB; cytolethal distending toxin subunit B D APECO1_544 cdtC; cytolethal distending toxin type IV subunit C K11015 cdtC; cytolethal distending toxin subunit C D APECO1_2170 ytfL; putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APECO1_3921 putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D APECO1_3628 yqfA; putative oxidoreductase, inner membrane subunit K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ecv02022] D APECO1_1610 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APECO1_1611 phoB; positive response regulator for pho regulon K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D APECO1_211 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO1_212 phoP; transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D APECO1_3060 envZ; osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APECO1_3059 ompR; osmolarity response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D APECO1_692 rstB; sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APECO1_691 rstA; transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA D APECO1_2557 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APECO1_2556 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APECO1_1980 creC; sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D APECO1_1981 creB; catabolic regulation response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D APECO1_1168 baeS; Sensor protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APECO1_1169 DNA-binding response regulator in two-component regulatory system with BaeS K07664 baeR; two-component system, OmpR family, response regulator BaeR D APECO1_2339 basS; BasS, sensory histidine kinase in two-component regulatory system with BasR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APECO1_2338 basR; BasR, DNA-binding response regulator in two-component regulatory system with BasS K07771 basR; two-component system, OmpR family, response regulator BasR D APECO1_1478 cusS; Sensor kinase cusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_O1R109 silS; SilS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_O1R122 pcoS; PcoS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_1477 ylcA; putative 2-component transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_O1R110 silR; SilR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_O1R122.2 pcoR; PcoR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_3395 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APECO1_3396 ygiX; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D APECO1_1372 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APECO1_1373 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APECO1_86 torS; sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D APECO1_88 torR; TorCAD operon transcriptional regulatory protein torR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D APECO1_3225 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APECO1_1978 arcA; global response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D APECO1_1003 yedV; putative 2-component sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D APECO1_1004 yedW; putative 2-component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D APECO1_339 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APECO1_338 narL; nitrate/nitrite response regulator protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D APECO1_4088 narQ; sensory histidine kinase in two-component regulatory system with NarP (NarL) K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APECO1_4365 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D APECO1_2784 uhpB; UhpB, sensory histidine kinase in two-component regulatory sytem with UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D APECO1_2783 uhpA; response regulator for uhpBA two component regulatory system K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA D APECO1_4341 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and RojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APECO1_4343 yojN; putative sensor-like histidine kinase YojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APECO1_4342 rcsB; DNA-binding response regulator in two-component regulatory system with RcsC and YojN K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APECO1_3745 barA; BarA, sensory histidine kinase; two-component regulator with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D APECO1_956 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D APECO1_4166 evgS; sensor protein EvgS precursor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D APECO1_4167 evgA; DNA-binding response regulator in two-component regulatory system with EvgS K07690 evgA; two-component system, NarL family, response regulator EvgA D APECO1_1433 dpiB; sensor kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D APECO1_1432 citB; conserved hypothetical protein K07702 dpiA; two-component system, CitB family, response regulator CitB D APECO1_2327 yjdH; sensor protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APECO1_2328 yjdG; transcriptional regulatory protein DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D APECO1_4157 ypdA; YpdA, sensory kinase in two-component system with YpdB K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APECO1_4423 yehU; putative sensory kinase in two-component system with YehT K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APECO1_2300 putative histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APECO1_4424 yehT; putative response regulator in two-component system with YehU K02477 K02477; two-component system, LytTR family, response regulator D APECO1_4156 ypdB; YpdB, predicted response regulator in two-component system with YpdA K02477 K02477; two-component system, LytTR family, response regulator D APECO1_2593 glnL; GlnL, sensory histidine kinase in two-component regulatory system with GlnG K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APECO1_2594 glnG; fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D APECO1_2472 zraS; ZraS, sensory histidine kinase in two-component regulatory system with ZraR K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D APECO1_2471 zraR; ZraR, fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein K07713 zraR; two-component system, NtrC family, response regulator HydG D APECO1_4340 atoS; sensor protein AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D APECO1_4339 atoC; fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein K07714 atoC; two-component system, NtrC family, response regulator AtoC D APECO1_3975 yfhK; putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APECO1_3977 yfhA; putative DNA-binding response regulator in two-component system K07715 glrR; two-component system, NtrC family, response regulator GlrR D APECO1_3508 pgtB; putative regulatory protein K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3] D APECO1_3507 pgtA; phosphoglycerate activator protein K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA D APECO1_2402 putative transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D APECO1_2403 two component response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D APECO1_936 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APECO1_931 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APECO1_932 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APECO1_2301 conserved hypothetical protein K07720 yesN; two-component system, response regulator YesN D APECO1_349 rssB; RssB/Hnr protein K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:ecv02035] D APECO1_936 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APECO1_935 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D APECO1_933 cheR; chemotaxis regulator, protein-glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APECO1_932 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APECO1_931 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APECO1_930 cheZ; chemotaxis regulator, protein phosphatase for CheY K03414 cheZ; chemotaxis protein CheZ D APECO1_2072 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APECO1_934 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APECO1_3344 aer; aerotaxis sensor receptor, flavoprotein K03776 aer; aerotaxis receptor D APECO1_979 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH D APECO1_980 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APECO1_981 fliJ; flagellar FliJ protein K02413 fliJ; flagellar protein FliJ D APECO1_986 fliO; flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ D APECO1_987 fliP; flagellar assembly protein FliP K02419 fliP; flagellar biosynthesis protein FliP D APECO1_988 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APECO1_989 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APECO1_1740 fhiA; FhiA protein K02400 flhA; flagellar biosynthesis protein FlhA D APECO1_928 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APECO1_929 flhB; flagellar biosynthesis protein B K02401 flhB; flagellar biosynthesis protein FlhB D APECO1_927 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE D APECO1_978 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APECO1_984 fliM; Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D APECO1_985 fliN; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D APECO1_977 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D APECO1_162 flgI; flagella basal body P-ring-like protein FlgI K02394 flgI; flagellar P-ring protein FlgI D APECO1_154 flgA; FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D APECO1_161 flgH; flagellar basal body L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH D APECO1_983 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL D APECO1_976 fliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE D APECO1_982 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D APECO1_155 flgB; cell-proximal portion of basal-body rod FlgB K02387 flgB; flagellar basal-body rod protein FlgB D APECO1_156 flgC; flagellar component of cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC D APECO1_157 flgD; flagellar hook formation protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D APECO1_159 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D APECO1_160 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D APECO1_163 flgJ; peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D APECO1_158 flgE; flagellar biosynthesis, hook protein FlgE K02390 flgE; flagellar hook protein FlgE D APECO1_164 flgK; hook-filament junction protein FlgK K02396 flgK; flagellar hook-associated protein 1 D APECO1_165 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D APECO1_152 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D APECO1_964 fliC; flagellin K02406 fliC; flagellin D APECO1_965 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D APECO1_966 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D APECO1_967 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT D APECO1_940 flhD; transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D APECO1_939 flhC; flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D APECO1_963 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D APECO1_938 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D APECO1_937 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D APECO1_1739 mbhA; putative motility protein MbhA K02557 motB; chemotaxis protein MotB D APECO1_961 fliY; cystine-binding periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein D APECO1_962 fliZ; conserved hypothetical protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D APECO1_153 flgM; FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D APECO1_3571 yggR; conserved hypothetical protein K02669 pilT; twitching motility protein PilT D APECO1_3455 pppA; putative prepilin peptidase A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D APECO1_634 fmlA; putative Fml fimbriae subunit K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO1_2116 fimA; type 1 fimbriae major subunit FimA K07345 fimA; major type 1 subunit fimbrin (pilin) D APECO1_2114 fimC; type I fimbrial chaperone K07346 fimC; fimbrial chaperone protein D APECO1_633 chaperone protein fimC precursor K07346 fimC; fimbrial chaperone protein D APECO1_3031 fimbrial chaperone protein precursor K07346 fimC; fimbrial chaperone protein D APECO1_632 outer membrane usher protein FimD precursor K07347 fimD; outer membrane usher protein D APECO1_2113 fimD; outer membrane usher protein FimD precursor K07347 fimD; outer membrane usher protein D APECO1_1846 htrE; outer membrane usher protein HtrE precursor K07347 fimD; outer membrane usher protein D APECO1_3032 aufC; outer membrane usher protein precursor AufC K07347 fimD; outer membrane usher protein D APECO1_4437 yehB; putative outer membrane usher protein YehB precursor K07347 fimD; outer membrane usher protein D APECO1_2112 FimF protein precursor K07348 fimF; minor fimbrial subunit D APECO1_2111 fimA; P pilus assembly protein, pilin FimA K07349 fimG; minor fimbrial subunit D APECO1_630 ydeR; predicted fimbrial-like adhesin protein K07349 fimG; minor fimbrial subunit D APECO1_2110 fimH; type 1 fimbiral adhesin FimH K07350 fimH; minor fimbrial subunit D APECO1_2115 fimI; FimI fimbrial protein K07351 fimI; fimbrial protein D APECO1_3033 aufD; Auf fimbriae minor subunit precursor AufD K07352 sfmA; type 1 fimbrial protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ecv04812] D APECO1_3194 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APECO1_O1R18 parM; ParM K18640 parM; plasmid segregation protein ParM D APECO1_1891 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APECO1_1892 ftsA; cell division protein K03590 ftsA; cell division protein FtsA D APECO1_289 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D APECO1_288 minD; cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D APECO1_287 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D APECO1_O1CoBM3 sopA; SopA K03496 parA; chromosome partitioning protein D APECO1_O1CoBM4 sopB; SopB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO1_O1R13 parB; ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APECO1_O1CoBM16 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ecv04147] D APECO1_1542 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D APECO1_3751 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APECO1_567 glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO1_847 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APECO1_3607 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D APECO1_904 pykA; Pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO1_754 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D APECO1_3093 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APECO1_2246 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_O1R91 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APECO1_1965 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APECO1_2443 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APECO1_4018 guaB; inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D APECO1_2492 tufA; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D APECO1_3114 tufA; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D APECO1_184 ycfF; HIT-like protein YcfF K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D APECO1_2404 putative lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APECO1_4136 yfeH; putative cytochrome oxidase K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D APECO1_863 fadD; long chain fatty acid CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D APECO1_3662 yqeF; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_4335 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APECO1_1541 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D APECO1_1546 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D APECO1_2507 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APECO1_3259 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APECO1_3653 ygeZ; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D APECO1_2160 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APECO1_1331 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APECO1_3025 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D APECO1_2543 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D APECO1_2592 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APECO1_1635 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D APECO1_1625 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO1_3693 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO1_3616 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APECO1_2469 purH; bifunctional AICAR formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APECO1_1869 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_2408 subunit of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APECO1_1939 fixB; putative electron transfer flavoprotein FixB K03522 fixB; electron transfer flavoprotein alpha subunit D APECO1_902 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APECO1_2550 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APECO1_1333 gpmA; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APECO1_2240 blc; outer membrane lipoprotein Blc precursor K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:ecv02048] D APECO1_1211 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D APECO1_1210 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D APECO1_1209 hypothetical protein K19127 csy1; CRISPR-associated protein Csy1 D APECO1_1208 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2 D APECO1_1207 hypothetical protein K19129 csy3; CRISPR-associated protein Csy3 D APECO1_1206 hypothetical protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D APECO1_2076 hsdR; DNA methylase R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D APECO1_2078 hsdS; HsdS, type I site-specific deoxyribonuclease K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D APECO1_2077 hsdM; DNA methylase M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D APECO1_3076 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO1_O1R219 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APECO1_3176 yhdJ; putative adenine-specific methylase YhdJ K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D APECO1_388 putative DNA adenine methyltransferase encoded by prophage CP-933O K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D APECO1_998 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_O1R127 cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APECO1_1027 hnhC; HnhC K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D APECO1_3888 putative phage endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D APECO1_2075 mrr; methylated adenine and cytosine restriction protein K07448 mrr; restriction system protein D APECO1_O1R173 stm; Stm K18921 hokB; protein HokB D APECO1_O1CoBM63 srnB; SrnB K18922 hokE; protein HokE D APECO1_2079 yjiW; conserved hypothetical protein K19048 symE; toxic protein SymE D APECO1_2910 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D APECO1_498 ydaC; unknown protein encoded within prophage CP-933R K19780 ralA; antisense regulator of RalR protein D APECO1_3748 chpA; probable growth inhibitor, PemK-like, autoregulated K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D APECO1_O1CoBM70 relE; RelE K06218 relE; mRNA interferase RelE/StbE D APECO1_O1CoBM69 conserved hypothetical protein K18923 stbD; antitoxin StbD D APECO1_1114 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D APECO1_1115 yefM; antitoxin of the YoeB-YefM toxin-antitoxin system K19159 yefM; antitoxin YefM D APECO1_637 hipA; regulator with HipB K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APECO1_2188 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APECO1_O1R79 putative capsule biosynthesis protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APECO1_O1R105 putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APECO1_638 hipB; HipB transcriptional activator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APECO1_O1R78 conserved hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APECO1_1736 conserved hypothetical protein K19160 yafO; mRNA interferase YafO [EC:3.1.-.-] D APECO1_4213 hypothetical protein K19160 yafO; mRNA interferase YafO [EC:3.1.-.-] D APECO1_1737 yafN; predicted antitoxin of the YafO-YafN toxin-antitoxin system K19161 yafN; antitoxin YafN D APECO1_1553 hha; Hha protein K05839 hha; haemolysin expression modulating protein D APECO1_460 pspC; phage shock protein C K03973 pspC; phage shock protein C D APECO1_510 putative bacteriophage protein K07341 doc; death on curing protein D APECO1_1530 conserved hypothetical protein K07334 higB-1; toxin HigB-1 D APECO1_613 conserved hypothetical protein K07334 higB-1; toxin HigB-1 D APECO1_3809 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D APECO1_1529 ybaQ; predicted DNA-binding transcriptional regulator K21498 higA-1; antitoxin HigA-1 D APECO1_612 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1 D APECO1_O1CoBM111 vagD; VagD K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D APECO1_O1CoBM112 vagC; VagC K18829 mvpT; antitoxin VapB D APECO1_2141 yjgK; conserved hypothetical protein K19334 tabA; biofilm protein TabA D APECO1_1285 ybiM; conserved hypothetical protein YbiM K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A D APECO1_142 yceP; conserved hypothetical protein K12148 bssS; biofilm regulator BssS D APECO1_1257 yliH; conserved hypothetical protein YliH K19688 bssR; biofilm regulator BssR D APECO1_193 ycfR; conserved hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA D APECO1_1891 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APECO1_3194 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APECO1_3400 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APECO1_3383 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APECO1_4141 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APECO1_3486 yeeV; conserved hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D APECO1_1103 yeeV; toxin of the YeeV-YeeU toxin-antitoxin system K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D APECO1_3487 yeeU; conserved hypothetical protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins D APECO1_1102 yeeU; antitoxin of the YeeV-YeeU toxin-antitoxin system K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins D APECO1_3631 conserved hypothetical protein K19168 cptA; toxin CptA D APECO1_3630 conserved hypothetical protein K09159 cptB; antitoxin CptB D APECO1_2325 yjdK; conserved hypothetical protein K18840 ghoS; antitoxin GhoS D APECO1_3995 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:ecv04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:ecv04090] C 01504 Antimicrobial resistance genes [BR:ecv01504] D APECO1_O1R90 aac3-VI; Aac3-VI K19277 aac3-VI; aminoglycoside 3-N-acetyltransferase VI [EC:2.3.1.81] D APECO1_O1R89 aadA; AadA K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47] D APECO1_O1R83 tetA; TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D APECO1_1251 cmr; proton motive force efflux pump K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D APECO1_O1R95 sulI; SulI K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D APECO1_1478 cusS; Sensor kinase cusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_O1R109 silS; SilS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_O1R122 pcoS; PcoS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D APECO1_1477 ylcA; putative 2-component transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_O1R110 silR; SilR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_O1R122.2 pcoR; PcoR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D APECO1_211 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APECO1_212 phoP; transcriptional regulatory protein PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D APECO1_449 acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_1551 acrA; acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system D APECO1_1552 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump D APECO1_450 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D APECO1_451 putative outer membrane channel protein K18139 oprM; outer membrane protein, multidrug efflux system D APECO1_1525 ybbI; putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D APECO1_3175 envR; putative acrEF/envCD operon repressor K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D APECO1_3174 acrE; acriflavine resistance protein E K18141 acrE; membrane fusion protein, multidrug efflux system D APECO1_3173 acrF; acriflavine resistance protein F K18142 acrF; multidrug efflux pump D APECO1_3378 tolC; TolC outer membrane-associated protein K12340 tolC; outer membrane protein D APECO1_4167 evgA; DNA-binding response regulator in two-component regulatory system with EvgS K07690 evgA; two-component system, NarL family, response regulator EvgA D APECO1_2935 mdtE; multidrug resistance efflux transporter K18898 mdtE; membrane fusion protein, multidrug efflux system D APECO1_2934 mdtF; putative multidrug transporter MdtF, RpoS-dependent K18899 mdtF; multidrug efflux pump D APECO1_649 marA; Multiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APECO1_41 ompF; OmpF K09476 ompF; outer membrane pore protein F D APECO1_1001 ompN; Outer membrane protein N precursor K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ecv00537] D APECO1_1625 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APECO1_314 treA; periplasmic trehalase precursor TreA K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D APECO1_2929 treF; cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:ecv03200] D APECO1_255 putative tail fiber component Z of prophage K26967 Z; Enterobacteria phage tail completion protein D APECO1_256 putative tail component of prophage K26968 U; Enterobacteria phage tail tube terminator protein D APECO1_405 putative tail component of prophage K26968 U; Enterobacteria phage tail tube terminator protein D APECO1_257 putative tail component of prophage CP-933X K26969 V; Enterobacteria phage tail tube protein D APECO1_258 Putative tail component of prophage K26970 G; Enterobacteria phage tail assembly protein G D APECO1_259 Putative tail component of prophage K26971 T; Enterobacteria phage tail assembly protein GT D APECO1_260 Putative tail component of prophage K26972 H; Enterobacteria phage tape measure protein D APECO1_407 putative tail component of prophage CP-933O K26972 H; Enterobacteria phage tape measure protein D APECO1_261 minor tail protein K26973 M; Enterobacteria phage tail tip protein M D APECO1_262 putative tail component of prophage K26974 L; Enterobacteria phage tail tip protein L D APECO1_5332 putative minor tail protein K26974 L; Enterobacteria phage tail tip protein L D APECO1_2017 putative minor tail protein K26974 L; Enterobacteria phage tail tip protein L D APECO1_2016 putative tail fiber component K of prophage K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_534 putative tail fiber component K of prophage K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_410 putative tail fiber component K of prophage K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_263 putative tail fiber component K of prophage K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_6004 tail assembly protein K26975 K; Enterobacteria phage tail tip assembly protein K D APECO1_265 putative tail component of prophage K26976 I; Enterobacteria phage tail tip assembly protein I D APECO1_535 putative tail component of prophage K26976 I; Enterobacteria phage tail tip assembly protein I D APECO1_2015 putative tail component of prophage CP-933K K26976 I; Enterobacteria phage tail tip assembly protein I D APECO1_2014 putative tail component of prophage K26977 J; Enterobacteria phage tip attachment protein J D APECO1_536 putative tail component of prophage K26977 J; Enterobacteria phage tip attachment protein J D APECO1_416 ynaC; probable phage-related tail fiber assembly protein G K26980 tfa; Enterobacteria phage tail fiber assembly protein D APECO1_243 putative Rz endopeptidase from lambdoid prophage K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D APECO1_515 conserved hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D APECO1_394 bacteriophage lambda cell lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D APECO1_1028 putative endopeptidase K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D APECO1_4197 conserved hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] D APECO1_3887 putative phage lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ecv03100] D APECO1_t02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t44 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t51 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t67 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t78 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APECO1_t05 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t50 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t73 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t43 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t53 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t54 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t55 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t56 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APECO1_t38 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO1_t39 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO1_t41 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO1_t40 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APECO1_t03 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO1_t71 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APECO1_t32 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D APECO1_t06 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO1_t07 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO1_t09 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO1_t10 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APECO1_t70 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APECO1_t84 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APECO1_t79 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APECO1_t01 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APECO1_t34 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t82 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t28 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t61 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t33 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t86 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t87 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t88 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APECO1_t74 tRNA-His K14226 tRNA-His; tRNA His D APECO1_t52 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO1_t68 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO1_t77 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APECO1_t65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t89 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t75 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t91 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t90 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t92 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APECO1_t13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t49 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t18 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t19 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t17 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t15 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APECO1_t25 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t36 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t08 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t12 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t63 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t58 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t59 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t60 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t64 tRNA-Met K14230 tRNA-Met; tRNA Met D APECO1_t62 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APECO1_t85 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APECO1_t76 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO1_t42 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO1_t93 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APECO1_t57 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t21 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t22 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t20 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APECO1_t66 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t83 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t27 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t35 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t80 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t04 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APECO1_t72 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D APECO1_t23 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO1_t81 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO1_t24 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APECO1_t14 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t48 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t47 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t16 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t46 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t29 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t30 tRNA-Val K14237 tRNA-Val; tRNA Val D APECO1_t69 tRNA-Sec K14238 tRNA-Sec; tRNA Sec # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D APECO1_2128 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D APECO1_2127 idnD; L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D APECO1_3413 dkgA; 2,5-diketo-D-gluconate reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D APECO1_1695 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D APECO1_1783 yafB; 2,5-diketo-D-gluconic acid reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D APECO1_1386 pdxA; putative pyridoxine phosphate biosynthetic protein K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D APECO1_3788 ygbJ; oxidoreductase YgbJ K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D APECO1_1450 ybdH; putative oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-] D APECO1_3422 yghZ; putative oxidoreductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D APECO1_1256 yliI; putative dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D APECO1_1591 yajO; predicted oxidoreductase, NAD(P)-binding K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D APECO1_3335 ygjL; NADPH 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D APECO1_1942 caiA; crotonobetainyl-CoA dehydrogenase K08297 caiA; crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13] D APECO1_141 solA; SolA K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-] D APECO1_775 ydiS; predicted oxidoreductase with FAD/NAD(P)-binding domain K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D APECO1_1938 ydiS; flavoprotein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D APECO1_3766 ygcN; putative electron transfer flavoprotein-quinone oxidoreductase YgcN K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D APECO1_2421 qor; Qor subunit of quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D APECO1_3391 mdaB; NADPH quinone reductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D APECO1_1443 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D APECO1_2169 msrA; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D APECO1_846 yeaA; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D APECO1_3432 yghU; putative glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D APECO1_4262 yfcG; putative S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D APECO1_3318 yqjG; putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D APECO1_1006 yedY; YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D APECO1_568 cybB; cytochrome b561 K12262 cybB; superoxide oxidase [EC:1.10.3.17] D APECO1_2930 yhjA; putative cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D APECO1_4077 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D APECO1_477 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D APECO1_1444 ahpC; alkyl hydroperoxide reductase, C22 subunit K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D APECO1_617 osmC; osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D APECO1_3019 yhhW; conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D APECO1_1287 ybiX; conserved hypothetical protein YbiX K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D APECO1_3979 hmpA; dihydropteridine reductase, ferrisiderophore reductase activity K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D APECO1_3346 yqjH; putative siderophore interacting protein K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9] D APECO1_950 ftn; cytoplasmic ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D APECO1_1862 cueO; multicopper oxidase (laccase) K14588 cueO; cuproxidase [EC:1.16.3.4] D APECO1_2545 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D APECO1_3815 ygbD; FlRd-NAD(+) reductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-] D APECO1_2952 arsC; arsenate reductase ArsC K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D APECO1_4074 yfgD; putative oxidoreductase YfgD K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D APECO1_2155 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D APECO1_1269 ybiY; putative pyruvate formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APECO1_2294 putative pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APECO1_1190 pflA; pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APECO1_2515 pflC; pyruvate formate-lyase 2 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APECO1_1222 hcr; NADH oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D APECO1_3780 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D APECO1_741 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D APECO1_639 tam; putative trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D APECO1_576 tehB; Tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D APECO1_2946 chuW; putative oxygen independent coproporphyrinogen III oxidase ChuW K21936 chuW; anaerobilin synthase [EC:2.1.1.342] D APECO1_132 mdoC; membrane protein required for modification of periplasmic glucan K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-] D APECO1_1651 lacA; galactoside O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18] D APECO1_15532 maa; Hha protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D APECO1_600 nhoA; N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D APECO1_4217 putative capsule O-acetyl transferase K22247 neuO; polysialic-acid O-acetyltransferase [EC:2.3.1.136] D APECO1_1406 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D APECO1_3274 yhbS; putative acyltransferase with acyl-CoA N-acyltransferase domain K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D APECO1_2898 yiaC; putative acyltransferase with acyl-CoA N-acyltransferase domain K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D APECO1_2464 yjaB; conserved hypothetical protein K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D APECO1_2138 yjgM; putative acetyltransferase YjgM K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D APECO1_1735 yafP; predicted acyltransferase with acyl-CoA N-acyltransferase domain K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D APECO1_589 yncA; predicted acyltransferase with acyl-CoA N-acyltransferase domain K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D APECO1_1204 aat; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D APECO1_469 ycjT; hypothetical transport protein YcjT K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D APECO1_462 ycjM; putative sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D APECO1_O1CoBM141 iroB; IroB K23725 iroB; enterobactin C-glucosyltransferase [EC:2.4.1.369] D APECO1_309 modD; putative pyrophosphorylase ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-] D APECO1_3949 yfiP; conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D APECO1_3677 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D APECO1_4345 yojL; putative thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D APECO1_2589 conserved hypothetical protein K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D APECO1_3787 ygbK; conserved hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D APECO1_1387 putative inner membrane protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D APECO1_779 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D APECO1_3361 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D APECO1_859 yeaP; conserved hypothetical protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D APECO1_658 ydeH; conserved hypothetical protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D APECO1_781 ydiU; conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D APECO1_2065 mdoB; phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D APECO1_2460 aceK; AceK, bifunctional isocitrate dehydrogenase kinase/phosphatase protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D APECO1_3375 assT; arylsulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D APECO1_4162 yfdW; formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D APECO1_4165 yfdE; putative CoA-transferase, NAD(P)-binding K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D APECO1_1943 caiB; crotonobetainyl-CoA:carnitineCoA-transferase K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D APECO1_130 ymdB; conserved hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D APECO1_O1CoBM138 IroE K23721 iroE; apo-salmochelin esterase [EC:3.1.1.107] D APECO1_1464 fes; enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D APECO1_O1CoBM139 iroD; IroD K23723 iroD; iron(III)-salmochelin esterase [EC:3.1.1.109] D APECO1_1539 ybaC; acetyl esterase K01066 aes; acetyl esterase [EC:3.1.1.-] D APECO1_1345 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D APECO1_891 pphA; serine/threonine protein phosphatase 1 K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16] D APECO1_4021 conserved hypothetical protein K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16] D APECO1_3790 pphB; serine/threonine-specific protein phosphatase 2 K07314 pphB; serine/threonine protein phosphatase 2 [EC:3.1.3.16] D APECO1_1271 ybiV; conserved hypothetical protein YbiV K07757 ybiV; sugar-phosphatase [EC:3.1.3.23] D APECO1_426 trpH; conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D APECO1_4226 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D APECO1_618 conserved hypothetical protein K13243 dos; c-di-GMP-specific phosphodiesterase [EC:3.1.4.52] D APECO1_1675 yahA; putative DNA-binding transcriptional regulator K13244 pdeL; c-di-GMP-specific phosphodiesterase [EC:3.1.4.52] D APECO1_281 conserved hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_4378 conserved hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_2395 yjcC; YjcC, predicted signal transduction protein (EAL domain containing protein) K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_1555 ylaB; conserved hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_1260 yliE; conserved hypothetical protein YliE K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_4066 yfgF; conserved hypothetical protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_4144 yfdA; conserved outer membrane protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_2919 yhjK; putative diguanylate cyclase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APECO1_2367 yjcS; conserved hypothetical protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D APECO1_2775 yidJ; predicted sulfatase/phosphatase YidJ K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-] D APECO1_626 ydeN; putative sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-] D APECO1_3576 endA; DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D APECO1_2616 tatD; DNase, magnesium-dependent K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APECO1_2003 yjjV; putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APECO1_181 ycfH; putative metallodependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APECO1_2273 putative TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APECO1_O1R128 putative nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D APECO1_1378 ybfF; putative esterase/lipase YbfF K01175 ybfF; esterase [EC:3.1.-.-] D APECO1_1730 yafA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-] D APECO1_2917 bcsZ; endo-1,4-D-glucanase BcsZ K20542 bcsZ; endoglucanase [EC:3.2.1.4] D APECO1_2033 ydfQ; Qin prophage; predicted lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APECO1_514 phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APECO1_392 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APECO1_242 ybcS2; bacteriophage lambda lysozyme-like protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APECO1_1029 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APECO1_2797 yicI; putative family 31 glucosidase YicI K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D APECO1_3336 ygjK; putative glycosyl hydrolase K03931 ygjK; glucosidase [EC:3.2.1.-] D APECO1_3160 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D APECO1_802 ydjC; conserved hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105] D APECO1_1428 ybeM; putative amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D APECO1_3627 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D APECO1_2149 yjgF; conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D APECO1_3311 tdcF; putative L-PSP (mRNA) endoribonuclease K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D APECO1_3286 agaI; putative galactosamine-6-phosphate isomerase K02080 agaI; putative deaminase/isomerase [EC:3.5.99.-] D APECO1_3360 ygiF; putative adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D APECO1_1141 wcaH; GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D APECO1_1565 cof; conserved hypothetical protein K11938 cof; HMP-PP phosphatase [EC:3.6.1.-] D APECO1_4310 yfaO; putative Nudix hydrolase YfaO K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-] D APECO1_4090 yffH; putative NUDIX hydrolase K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-] D APECO1_169 yceF; Maf-like protein yceF K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D APECO1_2717 yieN; fused predicted transcriptional regulator: sigma54 activator protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D APECO1_3786 ygbL; aldolase class II protein YgbL K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D APECO1_2587 conserved hypothetical protein K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57] D APECO1_1268 transaldolase-like protein K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-] D APECO1_2520 fsaB; fructose-6-phosphate aldolase 2 K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-] D APECO1_2224 yjeF; putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D APECO1_1945 caiD; carnitinyl-CoA dehydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149] D APECO1_3655 ygeX; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D APECO1_3722 csdA; cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D APECO1_2121 yjhT; conserved hypothetical protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24] D APECO1_3727 fucU; L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D APECO1_2567 yiiL; conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D APECO1_3818 gutQ; putative phosphosugar-binding protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] D APECO1_3785 ygbM; conserved hypothetical protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D APECO1_1944 caiC; crotonobetaine/carnitine-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D APECO1_2159 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D APECO1_3047 rtcA; RNA 3'-terminal phosphate cyclase, chain B K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D APECO1_713 rnfD; electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D APECO1_712 rnfC; electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D APECO1_711 rnfB; electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D APECO1_2985 zntA; lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D APECO1_2150 mgtA; Mg2+ transport ATPase, P-type 1 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] D APECO1_O1R116 silP; SilP K23254 silP; P-type Ag+ transporter [EC:7.2.2.15] C 99981 Carbohydrate metabolism D APECO1_1839 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D APECO1_87 torT; periplasmic protein TorT K11930 torT; periplasmic protein TorT D APECO1_1688 ykgE; conserved hypothetical protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D APECO1_1687 ykgG; conserved hypothetical protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D APECO1_1686 ykgG; conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG D APECO1_2122 yjhS; conserved hypothetical protein K22111 nanS; 9-O-acetyl-N-acetylneuraminic acid deacetylase C 99982 Energy metabolism D APECO1_2570 fdhD; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein D APECO1_1497 fdrA; putative transport protein FdrA K02381 fdrA; FdrA protein D APECO1_2634 yahF; conserved hypothetical protein K02381 fdrA; FdrA protein D APECO1_4000 fdx; [2Fe-2S] ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D APECO1_4324 yfaE; putative 2Fe-2S cluster-containing protein K11107 yfaE; ferredoxin D APECO1_714 rnfG; electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D APECO1_715 rnfE; NADH-ubiquinone oxidoreductase RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D APECO1_710 rnfA; electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D APECO1_3813 hydN; formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit K05796 hydN; electron transport protein HydN D APECO1_2721 mioC; flavodoxin MioC K06205 mioC; MioC protein D APECO1_3632 fldB; flavodoxin 2 K03840 fldB; flavodoxin II D APECO1_3996 iscU; scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins D APECO1_2156 cybC; soluble cytochrome b562 precursor K15536 cybC; soluble cytochrome b562 D APECO1_3801 hycB; hydrogenase 3, Fe-S subunit K15827 hycB; formate hydrogenlyase subunit 2 D APECO1_3802 hycC; NADH dehydrogenase subunit N K15828 hycC; formate hydrogenlyase subunit 3 D APECO1_3803 hycD; membrane-spanning protein of formate hydrogenase K15829 hycD; formate hydrogenlyase subunit 4 D APECO1_3804 hycE; hydrogenase 3, large subunit K15830 hycE; formate hydrogenlyase subunit 5 D APECO1_3805 hycF; formate hydrogenlyase complex iron-sulfur protein K15831 hycF; formate hydrogenlyase subunit 6 D APECO1_3806 hycG; hydrogenase 3 and formate hydrogenase complex, HycG subunit K15832 hycG; formate hydrogenlyase subunit 7 D APECO1_3816 norV; flavorubredoxin oxidoreductase K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D APECO1_4352 napD; assembly protein for periplasmic nitrate reductase K02570 napD; periplasmic nitrate reductase NapD D APECO1_4351 napF; ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) K02572 napF; ferredoxin-type protein NapF D APECO1_2381 nrfE; formate-dependent nitrite reductase subunit nrfE K04016 nrfE; cytochrome c-type biogenesis protein NrfE D APECO1_2380 nrfG; formate-dependent nitrite reductase complex NrfG subunit K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG D APECO1_1380 fldA; flavodoxin 1 K03839 fldA; flavodoxin I D APECO1_4357 napC; nitrate reductase, cytochrome c-type, periplasmic K02569 napC; cytochrome c-type protein NapC D APECO1_4354 napG; quinol dehydrogenase periplasmic component K02573 napG; ferredoxin-type protein NapG D APECO1_4355 napH; quinol dehydrogenase membrane component K02574 napH; ferredoxin-type protein NapH D APECO1_1940 fixA; predicted electron transfer flavoprotein subunit, ETFP adenine nucleotide binding domain K03521 fixA; electron transfer flavoprotein beta subunit D APECO1_3765 ygcO; ferredoxin-like protein YgcO K03855 fixX; ferredoxin like protein D APECO1_776 ydiT; predicted 4Fe-4S ferredoxin-type protein K03855 fixX; ferredoxin like protein D APECO1_2384 nrfB; NrfB, formate-dependent nitrite reductase; a penta-haeme cytochrome c K04013 nrfB; cytochrome c-type protein NrfB D APECO1_2383 nrfC; formate-dependent nitire reductase subunit NrfC K04014 nrfC; protein NrfC D APECO1_750 putative oxidoreductase Fe-S subunit K04014 nrfC; protein NrfC D APECO1_2382 nrfD; formate-dependent nitrite reductase, membrane subunit NrfD K04015 nrfD; protein NrfD D APECO1_1690 ykgC; putative pyridine nucleotide-disulfide oxidoreductase ykgC K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D APECO1_2205 aidB; putative acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D APECO1_3847 nrdI; protein that stimulates ribonucleotide reduction K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D APECO1_4132 cysZ; putative sulfate transport protein CysZ K06203 cysZ; CysZ protein D APECO1_4105 eutH; putative ethanolamine utilization transport protein EutH K04023 eutH; ethanolamine transporter D APECO1_2284 eutJ; ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ D APECO1_4103 eutJ; ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ D APECO1_4110 eutK; ethanolamine utilization protein EutK K04025 eutK; ethanolamine utilization protein EutK D APECO1_4109 eutL; ethanolamine utilization protein EutL K04026 eutL; ethanolamine utilization protein EutL D APECO1_4101 cchB; putative carboxysome structural protein, ethanolamine utilization K04028 eutN; ethanolamine utilization protein EutN D APECO1_4096 eutP; ethanolamine utilization protein EutP K04029 eutP; ethanolamine utilization protein EutP D APECO1_4097 eutQ; ethanolamine utilization protein EutQ K04030 eutQ; ethanolamine utilization protein EutQ D APECO1_4095 eutS; ethanolamine utilization protein EutS K04031 eutS; ethanolamine utilization protein EutS D APECO1_1800 yaeR; putative lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein D APECO1_479 ycjI; putative lysine carboxypeptidase K14054 mpaA; murein peptide amidase A D APECO1_3570 yggS; conserved hypothetical protein K06997 yggS; PLP dependent protein D APECO1_3314 yhaM; conserved hypothetical protein K26607 cyuA; putative L-cysteine desulfidase C 99986 Glycan metabolism D APECO1_1146 wcaD; putative colanic acid polymerase K13620 wcaD; putative colanic acid polymerase D APECO1_1133 wcaM; putative colanic acid biosynthesis protein K16711 wcaM; colanic acid biosynthesis protein WcaM D APECO1_439 yciS; conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D APECO1_440 yciM; conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B D APECO1_1302 ybhN; conserved hypothetical protein YbhN K07027 K07027; glycosyltransferase 2 family protein D APECO1_2916 bcsB; regulator of cellulose synthase, cyclic di-GMP binding protein BcsB K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D APECO1_3600 yggC; conserved hypothetical protein K02173 yggC; putative kinase D APECO1_2676 hemY; putative protoheme IX synthesis protein K02498 hemY; HemY protein D APECO1_2620 ubiB; putative ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D APECO1_2621 yigP; conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D APECO1_3365 yqiC; conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D APECO1_3273 yhbT; putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D APECO1_2605 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D APECO1_3402 sufI; repressor protein for FtsI K04753 sufI; suppressor of ftsI D APECO1_2747 yieF; conserved hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D APECO1_3988 yphA; conserved hypothetical protein K15977 K15977; putative oxidoreductase D APECO1_3319 yqjF; conserved hypothetical protein K15977 K15977; putative oxidoreductase D APECO1_4084 ypfH; conserved hypothetical protein K06999 K06999; phospholipase/carboxylesterase D APECO1_3948 yfiQ; acyl-CoA synthetase (NDP forming) K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D APECO1_3820 gutM; DNA-binding transcriptional activator of glucitol operon K02466 gutM; glucitol operon activator protein D APECO1_3205 yhcO; putative barnase inhibitor K03623 yhcO; ribonuclease inhibitor D APECO1_3305 tdcR; threonine dehydratase operon activator protein K07591 tdcR; threonine dehydratase operon activator protein D APECO1_2480 yjaE; Regulator of sigma D K07740 rsd; regulator of sigma D D APECO1_4191 roi; DNA-binding protein Roi K07741 antB; anti-repressor protein D APECO1_3800 hycA; transcriptional repressor of hyc and hyp operons K15833 hycA; formate hydrogenlyase regulatory protein HycA D APECO1_3807 hycH; formate hydrogenlyase maturation protein HycH K15834 hycH; formate hydrogenlyase maturation protein HycH D APECO1_1561 glnK; glutamine synthetase activity regulation protein K04752 glnK; nitrogen regulatory protein P-II 2 D APECO1_3057 yhgF; putative transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D APECO1_2964 rbbA; fused ribosome-associated ATPase: ATP-binding protein, predicted membrane protein K13926 rbbA; ribosome-dependent ATPase C 99975 Protein processing D APECO1_553 hslJ; heat shock protein HslJ K03668 hslJ; heat shock protein HslJ D APECO1_1214 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D APECO1_1575 tig; trigger factor K03545 tig; trigger factor D APECO1_1007 yedZ; YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D APECO1_2574 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D APECO1_3915 smpB; trans-translation protein K03664 smpB; SsrA-binding protein D APECO1_3797 hypC; protein required for maturation of hydrogenases 1 and 3 K04653 hypC; hydrogenase expression/formation protein HypC D APECO1_3796 hypD; protein required for maturation of hydrogenases K04654 hypD; hydrogenase expression/formation protein HypD D APECO1_3795 hypE; carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein K04655 hypE; hydrogenase expression/formation protein HypE D APECO1_3814 hypF; hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D APECO1_2704 yifB; putative bifunctional enzyme and transcriptional regulator K07391 comM; magnesium chelatase family protein D APECO1_3099 conserved hypothetical protein K07397 yhfA; putative redox protein D APECO1_3052 conserved hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA D APECO1_3651 yqeB; putative synthase K07402 xdhC; xanthine dehydrogenase accessory factor D APECO1_594 conserved hypothetical protein K11208 yncG; GST-like protein C 99976 Replication and repair D APECO1_1557 ybaZ; conserved hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D APECO1_3733 exo; exodeoxyribonuclease IX K01146 xni; protein Xni D APECO1_2123 conserved hypothetical protein K07454 K07454; putative restriction endonuclease D APECO1_2823 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D APECO1_2316 yeeS3; putative radC-like protein YeeS K03630 radC; DNA repair protein RadC D APECO1_3488 yeeS; putative radC-like protein YeeS K03630 radC; DNA repair protein RadC D APECO1_2623 rmuC; putative recombination limiting protein RmuC K09760 rmuC; DNA recombination protein RmuC D APECO1_1218 ybjD; conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D APECO1_O1CoBM79 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D APECO1_3500 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D APECO1_3282 yraN; conserved hypothetical protein K07460 yraN; putative endonuclease D APECO1_3275 yhbQ; conserved hypothetical protein K07461 K07461; putative endonuclease D APECO1_3161 conserved hypothetical protein K04096 smf; DNA processing protein D APECO1_1182 hypothetical protein K04096 smf; DNA processing protein D APECO1_2118 fimB; type 1 fimbriae regulatory protein FimB K07357 fimB; type 1 fimbriae regulatory protein FimB D APECO1_1681 conserved hypothetical protein K07357 fimB; type 1 fimbriae regulatory protein FimB D APECO1_2117 fimE; type 1 fimbriae regulatory protein FimE K07358 fimE; type 1 fimbriae regulatory protein FimE D APECO1_1107 sbmC; DNA gyrase inhibitor K07470 sbmC; DNA gyrase inhibitor D APECO1_4037 putative phage terminase, small subunit K07474 xtmA; phage terminase small subunit D APECO1_4201 phage terminase large subunit K06909 xtmB; phage terminase large subunit D APECO1_1197 ycaJ; putative polynucleotide enzyme K07478 ycaJ; putative ATPase D APECO1_3163 yrdD; predicted DNA topoisomerase K07479 yrdD; putative DNA topoisomerase D APECO1_506 ydaV; Rac prophage; predicted DNA replication protein K10762 ydaV; putative replication protein D APECO1_2008 pinR; Rac prophage; predicted site-specific recombinase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D APECO1_O1CoBM103 resolvase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D APECO1_2261 insB; IS1 InsB protein K07480 insB; insertion element IS1 protein InsB D APECO1_2267 insB; IS1 InsB protein K07480 insB; insertion element IS1 protein InsB D APECO1_2257 insB; IS1 InsB protein K07480 insB; insertion element IS1 protein InsB D APECO1_O1CoBM158 insB; InsB K07480 insB; insertion element IS1 protein InsB D APECO1_O1CoBM2 insB; InsB K07480 insB; insertion element IS1 protein InsB D APECO1_O1CoBM182 insB; InsB K07480 insB; insertion element IS1 protein InsB D APECO1_O1CoBM165 insB; InsB K07480 insB; insertion element IS1 protein InsB D APECO1_O1CoBM75 insB; InsB K07480 insB; insertion element IS1 protein InsB D APECO1_O1R21 putative transposase K07481 K07481; transposase, IS5 family D APECO1_O1R80 tnpA; TnpA K18320 IS15; transposase, IS6 family D APECO1_O1R134 tnpA; IS26 transposase K18320 IS15; transposase, IS6 family D APECO1_1089 putative transposase subunit K07483 K07483; transposase D APECO1_3498 putative transposase; OrfA protein of insertion sequence IS629 K07483 K07483; transposase D APECO1_2269 insN; transposase InsN for insertion sequence element IS911B K07483 K07483; transposase D APECO1_O1CoBM91 conserved hypothetical protein K07483 K07483; transposase D APECO1_O1CoBM194 conserved hypothetical protein K07483 K07483; transposase D APECO1_O1R216 conserved hypothetical protein K07483 K07483; transposase D APECO1_O1CoBM97 conserved hypothetical protein K07483 K07483; transposase D APECO1_O1CoBM126 insL; InsL K07483 K07483; transposase D APECO1_O1CoBM148 insL; InsL K07483 K07483; transposase D APECO1_2306 transposase InsC for insertion element IS2A/D/F/H/I/K K07483 K07483; transposase D APECO1_3940 putative transposase subunit K07483 K07483; transposase D APECO1_3513 insC; IS2 transposase K07483 K07483; transposase D APECO1_O1CoBM72 conserved hypothetical protein K07483 K07483; transposase D APECO1_O1CoBM94 conserved hypothetical protein K07483 K07483; transposase D APECO1_O1CoBM92 conserved hypothetical protein K07484 K07484; transposase D APECO1_O1R215 ISEc8 transposase K07484 K07484; transposase D APECO1_O1CoBM93 conserved hypothetical protein K07484 K07484; transposase D APECO1_O1R214 ISEc8 transposase K07484 K07484; transposase D APECO1_1948 putative transposase K07491 rayT; REP-associated tyrosine transposase D APECO1_1741 yafM; conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase D APECO1_O1CoBM157 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D APECO1_354 insG; transposase InsG for insertion sequence element IS4 K07495 K07495; putative transposase D APECO1_2270 transposase insF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase D APECO1_1088 putative transposase subunit K07497 K07497; putative transposase D APECO1_3499 putative transposase for IS629 K07497 K07497; putative transposase D APECO1_2258 conserved hypothetical protein K07497 K07497; putative transposase D APECO1_O1CoBM95 IS2 transposase K07497 K07497; putative transposase D APECO1_O1CoBM149 insD; InsD K07497 K07497; putative transposase D APECO1_O1CoBM71 conserved hypothetical protein K07497 K07497; putative transposase D APECO1_O1CoBM195 IS629 transposase K07497 K07497; putative transposase D APECO1_O1CoBM125 insD; InsD K07497 K07497; putative transposase D APECO1_2259 conserved hypothetical protein K07497 K07497; putative transposase D APECO1_O1CoBM143 conserved hypothetical protein K07497 K07497; putative transposase D APECO1_O1CoBM196 hypothetical protein K07497 K07497; putative transposase D APECO1_O1CoBM98 transposase K07497 K07497; putative transposase D APECO1_3512 insD; IS2 transposase K07497 K07497; putative transposase D APECO1_3941 putative transposase subunit K07497 K07497; putative transposase D APECO1_497 intR; Rac prophage; integrase K14059 int; integrase D APECO1_3866 conserved hypothetical protein K14059 int; integrase D APECO1_548 putative integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D APECO1_459 pspA; phage shock protein A K03969 pspA; phage shock protein A D APECO1_461 pspE; phage shock protein E precursor K03972 pspE; phage shock protein E D APECO1_1544 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D APECO1_4219 yfdC; putative transport protein K21990 yfdC; formate-nitrite transporter family protein D APECO1_2796 yicJ; putative symporter YicJ K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APECO1_2679 yifK; putative amino acid permease protein YifK K03293 TC.AAT; amino acid transporter, AAT family D APECO1_2099 cniT; putative carnitine transporter CniT K03451 TC.BCT; betaine/carnitine transporter, BCCT family D APECO1_2957 yhiP; putative transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APECO1_717 ydgR; putative tripeptide transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APECO1_2323 yjdL; putative peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APECO1_1366 ybgH; conserved hypothetical protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APECO1_2774 yidK; putative symporter YidK K03307 TC.SSS; solute:Na+ symporter, SSS family D APECO1_1971 yaaJ; putative transporter YaaJ K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D APECO1_1609 brnQ; branched-chain amino-acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D APECO1_1319 ybhI; conserved hypothetical protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D APECO1_1246 conserved hypothetical protein K07085 K07085; putative transport protein D APECO1_2772 yidE; putative membrane/transport protein K07085 K07085; putative transport protein D APECO1_4439 yohN; conserved hypothetical protein K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D APECO1_370 yciB; conserved hypothetical protein K06190 ispZ; intracellular septation protein D APECO1_2982 conserved hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB D APECO1_2177 ytfE; conserved hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D APECO1_800 cedA; cell division activator K15722 cedA; cell division activator D APECO1_2842 envC; protease with a role in cell division K22719 envC; murein hydrolase activator C 99993 Cell motility D APECO1_186 conserved hypothetical protein K07337 K07337; penicillin-binding protein activator D APECO1_64 yccR; conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins D APECO1_1845 ecpD; predicted periplasmic pilin chaperone K15540 ecpD; chaperone protein EcpD D APECO1_3738 syd; SecY interacting protein Syd K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D APECO1_1878 ampE; putative beta lactamase regulator K03807 ampE; AmpE protein D APECO1_O1R69 terA; TerA K05792 terA; tellurite resistance protein TerA D APECO1_O1R72 terD; TerD K05795 terD; tellurium resistance protein TerD D APECO1_O1R73 terE; TerE K05795 terD; tellurium resistance protein TerD D APECO1_O1R68 terZ; TerZ K05791 terZ; tellurium resistance protein TerZ D APECO1_886 proQ; Activator of osmoprotectant transporter ProP K03607 proQ; ProP effector D APECO1_2958 uspA; universal stress global response regulator UspA K06149 uspA; universal stress protein A D APECO1_941 yecG; universal stress protein K14064 uspC; universal stress protein C D APECO1_2546 yiiT; stress-induced protein K14065 uspD; universal stress protein D D APECO1_486 conserved hypothetical protein K14055 uspE; universal stress protein E D APECO1_549 putative filament protein K14061 uspF; universal stress protein F D APECO1_1442 uspG; universal stress protein UspG K11932 uspG; universal stress protein G D APECO1_1451 cstA; carbon starvation protein K06200 cstA; carbon starvation protein D APECO1_2591 bipA; GTP-binding protein K06207 typA; GTP-binding protein D APECO1_1403 ybeZ; putative ATP-binding protein in pho regulon K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D APECO1_111 phoH; conserved protein with nucleoside triphosphate hydrolase domain K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D APECO1_851 yeaG; conserved hypothetical protein K07180 prkA; serine protein kinase D APECO1_3359 htrG; putative signal transduction protein (SH3 domain) K07184 ygiM; SH3 domain protein D APECO1_1994 smp; Smp protein precursor K07186 smp; membrane protein D APECO1_1585 yajQ; conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein D APECO1_2106 yjiD; conserved hypothetical protein K21637 iraD; anti-adapter protein IraD D APECO1_278 ycgF; conserved hypothetical protein K21973 bluF; blue light- and temperature-responsive anti-repressor D APECO1_279 conserved hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D APECO1_280 ymgB; conserved hypothetical protein K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance C 99992 Structural proteins D APECO1_1198 lolA; Outer-membrane lipoprotein carrier protein precursor K03634 lolA; outer membrane lipoprotein carrier protein D APECO1_325 hemM; outer membrane lipoprotein LolB precursor K02494 lolB; outer membrane lipoprotein LolB D APECO1_4220 vacJ; putative lipoprotein VacJ K04754 mlaA; phospholipid-binding lipoprotein MlaA D APECO1_2689 wzzE; entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein WzzE K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D APECO1_724 slyB; outer membrane lipoprotein SlyB precursor K06077 slyB; outer membrane lipoprotein SlyB D APECO1_1809 conserved hypothetical protein K06142 hlpA; outer membrane protein D APECO1_3781 nlpD; putative outer membrane lipoprotein K06194 nlpD; lipoprotein NlpD D APECO1_3660 ygeR; putative lipoportein K12943 ygeR; lipoprotein YgeR D APECO1_3267 nlpI; putative lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D APECO1_3477 kpsS; polysialic acid capsule synthesis protein KpsS K07265 kpsS; capsular polysaccharide export protein D APECO1_3478 kpsC; capsule polysaccharide export protein KpsC K07266 kpsC; capsular polysaccharide export protein D APECO1_4443 yegX; conserved hypothetical protein K07273 acm; lysozyme D APECO1_372 ompW; outer membrane protein W precursor K07275 ompW; outer membrane protein D APECO1_7922 ydiY; conserved hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D APECO1_2951 slp; outer membrane protein induced after carbon starvation K07285 slp; outer membrane lipoprotein D APECO1_864 yeaY; conserved predicted lipoprotein K07285 slp; outer membrane lipoprotein D APECO1_1577 yajG; conserved hypothetical lipoprotein YajG precursor K07286 yajG; uncharacterized lipoprotein D APECO1_1155 asmA; AsmA suppressor of OmpF assembly mutants K07289 asmA; AsmA protein D APECO1_2924 yhjG; putative outer membrane biogenesis protein YhjG K07290 yhjG; AsmA family protein D APECO1_1521 ybbJ; hypothetical protein YbbJ K07340 ybbJ; inner membrane protein D APECO1_2963 yhiI; conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein D APECO1_684 ydgG; conserved hypothetical protein K11744 tqsA; AI-2 transport protein TqsA D APECO1_808 osmE; Osmotically inducible lipoprotein E precursor K04064 osmE; osmotically inducible lipoprotein OsmE D APECO1_1979 creD; inner membrane protein CreD K06143 creD; inner membrane protein D APECO1_4361 ccmE; periplasmic heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE D APECO1_4364 ccmH; heme lyase, CcmH subunit K02200 ccmH; cytochrome c-type biogenesis protein CcmH D APECO1_4008 yfgA; conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ D APECO1_3202 conserved hypothetical protein K21695 aaeX; protein AaeX D APECO1_2938 hdeD; acid-resistance membrane protein HdeD K21908 hdeD; membrane protein HdeD D APECO1_2290 eutL; putative propanediol utilization protein K27263 pduB; bacterial microcompartment shell protein C 99994 Others D APECO1_2737 phoU; negative regulator for pho regulon and putative enzyme in phosphate metabolism K02039 phoU; phosphate transport system protein D APECO1_947 yecI; ferritin-like protein K02255 ftnB; ferritin-like protein 2 D APECO1_133 mdoG; periplasmic glucans biosynthesis protein MdoG precursor K03670 mdoG; periplasmic glucans biosynthesis protein D APECO1_O1R70 terB; TerB K05793 terB; tellurite resistance protein TerB D APECO1_O1R71 terC; TerC K05794 terC; tellurite resistance protein TerC D APECO1_924 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein D APECO1_2353 phnK; PhnK, carbon-phosphorus lyase complex subunit K05781 phnK; putative phosphonate transport system ATP-binding protein D APECO1_1932 conserved hypothetical protein K06195 apaG; ApaG protein D APECO1_2671 cyaB; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D APECO1_2949 chuS; putative heme/hemoglobin transport protein ChuS K07225 hmuS; putative hemin transport protein D APECO1_2945 conserved hypothetical protein K07227 chuX; heme iron utilization protein D APECO1_O1R119 pcoB; PcoB K07233 pcoB; copper resistance protein B D APECO1_336 ychN; conserved hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D APECO1_4251 cvpA; putative bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production D APECO1_4061 putative endolysin K03791 K03791; putative chitinase D APECO1_2880 bax; putative ATP-binding protein K03796 bax; Bax protein D APECO1_57 pqiB; PqiB K06192 pqiB; paraquat-inducible protein B D APECO1_150 mviM; MviM K03810 mviM; virulence factor D APECO1_4294 elaA; putative acyltransferase K02348 elaA; ElaA protein D APECO1_3946 yfiM; conserved hypothetical protein K05811 yfiM; putative lipoprotein D APECO1_2005 osmotically inducible protein Y precursor K04065 osmY; hyperosmotically inducible periplasmic protein D APECO1_119 ycdX; predicted zinc-binding hydrolase K04477 ycdX; putative hydrolase D APECO1_3953 yfiD; putative formate acetyltransferase K06866 grcA; autonomous glycyl radical cofactor D APECO1_348 ychK; conserved hypothetical protein K07001 K07001; NTE family protein D APECO1_1097 putative esterase K07001 K07001; NTE family protein D APECO1_1829 yadR; conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein D APECO1_761 sufA; Fe-S cluster assembly protein K05997 sufA; Fe-S cluster assembly protein SufA D APECO1_760 sufB; component of SufBCD complex K09014 sufB; Fe-S cluster assembly protein SufB D APECO1_758 sufD; component of SufB-SufC-SufD cysteine desulfurase (SufS) activator complex K09015 sufD; Fe-S cluster assembly protein SufD D APECO1_798 ydjM; conserved hypothetical protein K07038 K07038; inner membrane protein D APECO1_1487 conserved hypothetical protein K07038 K07038; inner membrane protein D APECO1_3084 php; putative hydrolase/phosphotriesterase K07048 PTER; phosphotriesterase-related protein D APECO1_1079 putative phosphotriesterase-related protein K07048 PTER; phosphotriesterase-related protein D APECO1_2581 rbn; tRNA processing exoribonuclease BN K07058 K07058; membrane protein D APECO1_2926 yhjD; conserved hypothetical protein K07058 K07058; membrane protein D APECO1_2249 yjeG; conserved hypothetical protein K07113 fxsA; UPF0716 protein FxsA D APECO1_756 sufE; subunit of SufE homodimer, sulfur acceptor that activates SufS cysteine desulfurase K02426 sufE; cysteine desulfuration protein SufE D APECO1_3721 ygdK; putative Fe-S metabolism protein K02426 sufE; cysteine desulfuration protein SufE D APECO1_138 yceA; conserved hypothetical protein K07146 K07146; UPF0176 protein D APECO1_214 ycfC; conserved hypothetical protein K07153 hflD; high frequency lysogenization protein D APECO1_1946 caiE; carnitine operon protein CaiE K08279 caiE; carnitine operon protein CaiE D APECO1_2344 phnB; conserved hypothetical protein K04750 phnB; PhnB protein D APECO1_3450 glcC; conserved hypothetical protein K11477 glcG; glc operon protein GlcG D APECO1_1480 nfrA; bacteriophage N4 adsorption protein A precursor K11739 nfrA; bacteriophage N4 adsorption protein A D APECO1_1479 nfrB; bacteriophage N4 receptor, outer membrane protein K11740 nfrB; bacteriophage N4 adsorption protein B D APECO1_135 msyB; MsyB K12147 msyB; acidic protein MsyB D APECO1_2057 fhuF; ferric iron reductase protein FhuF K13255 fhuF; ferric iron reductase protein FhuF D APECO1_3743 ygcY; glucarate dehydratase-related protein K13918 gudX; glucarate dehydratase-related protein D APECO1_3755 conserved hypothetical protein K03744 lemA; LemA protein D APECO1_3162 putative cytoplasmic protein K03747 smg; Smg protein D APECO1_1982 creA; conserved hypothetical protein K05805 creA; CreA protein D APECO1_3577 sprT; SprT protein K02742 sprT; SprT protein D APECO1_4250 dedD; putative lipoprotein DedD K03749 dedD; DedD protein D APECO1_3075 damX; conserved hypothetical protein K03112 damX; DamX protein D APECO1_4406 sanA; putative vancomycin sensitivity protein K03748 sanA; SanA protein D APECO1_4247 conserved hypothetical protein K03975 dedA; membrane-associated protein D APECO1_56 pqiA; PqiA K03808 pqiA; paraquat-inducible protein A D APECO1_887 yebS; conserved hypothetical protein K03808 pqiA; paraquat-inducible protein A D APECO1_4295 elaB; conserved hypothetical protein K05594 elaB; ElaB protein D APECO1_2776 yidH; conserved hypothetical protein K00389 yidH; putative membrane protein D APECO1_2331 yjdF; putative inner membrane protein K08984 yjdF; putative membrane protein D APECO1_2208 yjfL; conserved hypothetical protein K08989 K08989; putative membrane protein D APECO1_475 ycjF; conserved hypothetical protein K08990 ycjF; putative membrane protein D APECO1_1710 yagU; putative membrane protein K08996 yagU; putative membrane protein D APECO1_347 ychJ; conserved hypothetical protein K09858 K09858; SEC-C motif domain protein D APECO1_1558 ybaY; conserved hypothetical lipoprotein K09914 K09914; putative lipoprotein D APECO1_81 hyaF; hydrogenase-1 operon protein HyaF K03618 hyaF; hydrogenase-1 operon protein HyaF D APECO1_80 hyaE; protein involved in processing of HyaA and HyaB proteins K03619 hyaE; hydrogenase-1 operon protein HyaE D APECO1_2431 malM; maltose operon periplasmic protein precursor MalM K05775 malM; maltose operon periplasmic protein D APECO1_2437 yjbE; conserved hypothetical protein K13256 psiE; protein PsiE D APECO1_1618 aroM; protein of aro operon, regulated by aroR K14591 aroM; protein AroM D APECO1_1691 ykgB; putative membrane protein K21741 rclC; reactive chlorine resistance protein C C 99997 Function unknown D APECO1_1672 yahD; putative transcription factor K06867 K06867; uncharacterized protein D APECO1_2678 aslB; putative regulator of arylsulfatase activity K06871 K06871; uncharacterized protein D APECO1_625 ydeM; conserved hypothetical protein K06871 K06871; uncharacterized protein D APECO1_2778 yidF; conserved hypothetical protein K06871 K06871; uncharacterized protein D APECO1_3753 conserved hypothetical protein K06872 K06872; uncharacterized protein D APECO1_3754 conserved hypothetical protein K06872 K06872; uncharacterized protein D APECO1_3752 conserved hypothetical protein K06872 K06872; uncharacterized protein D APECO1_3392 conserved hypothetical protein K06887 K06887; uncharacterized protein D APECO1_1772 aec32; conserved hypothetical protein K06887 K06887; uncharacterized protein D APECO1_3015 yhhZ; conserved hypothetical protein K06887 K06887; uncharacterized protein D APECO1_2644 conserved hypothetical protein K06887 K06887; uncharacterized protein D APECO1_1876 usp; uropathogenic specific protein K06887 K06887; uncharacterized protein D APECO1_481 ycjY; hypothetical protein YcjY K06889 K06889; uncharacterized protein D APECO1_1699 ycjY; conserved hypothetical protein K06889 K06889; uncharacterized protein D APECO1_3991 yfhR; putative peptidase K06889 K06889; uncharacterized protein D APECO1_2202 conserved hypothetical protein K06889 K06889; uncharacterized protein D APECO1_O1CoBM60 conserved hypothetical protein K06889 K06889; uncharacterized protein D APECO1_1303 ybhM; conserved hypothetical protein YbhM K06890 K06890; uncharacterized protein D APECO1_1304 ybhL; conserved hypothetical protein YbhL K06890 K06890; uncharacterized protein D APECO1_4479 phage baseplate protein K06903 W; Bacteriophage baseplate protein W D APECO1_1177 phage protein D K06905 D; Bacteriophage probable baseplate hub protein D APECO1_13 gpD; gpD K06905 D; Bacteriophage probable baseplate hub protein D APECO1_1178 phage protein U K06906 gpU; phage tail protein D APECO1_12 gpU; gpU phage protein K06906 gpU; phage tail protein D APECO1_8 gpF1; gpF1 K06907 FI; Bacteriophage tail sheath protein D APECO1_9 gpFII; gpFII K06908 FII; Bacteriophage tail tube protein D APECO1_474 ycjX; conserved hypothetical protein K06918 K06918; uncharacterized protein D APECO1_70 conserved hypothetical protein K06929 K06929; uncharacterized protein D APECO1_3605 conserved hypothetical protein K06934 K06934; uncharacterized protein D APECO1_1709 ykgJ; putative ferredoxin K06940 K06940; uncharacterized protein D APECO1_1093 conserved hypothetical protein K06946 K06946; uncharacterized protein D APECO1_2311 putative GTPase K06946 K06946; uncharacterized protein D APECO1_3493 conserved hypothetical protein K06946 K06946; uncharacterized protein D APECO1_999 yedJ; conserved hypothetical protein K06950 K06950; uncharacterized protein D APECO1_799 ydjN; hypothetical symporter YdjN K06956 K06956; uncharacterized protein D APECO1_2326 yjdJ; putative acyltransferase with acyl-CoA N-acyltransferase domain K06975 K06975; uncharacterized protein D APECO1_189 ycfP; conserved hypothetical protein K07000 K07000; uncharacterized protein D APECO1_3382 yqiA; putative esterase K07000 K07000; uncharacterized protein D APECO1_4368 yejM; putative hydrolase, inner membrane K07014 K07014; uncharacterized protein D APECO1_3101 yheT; putative hydrolase K07019 K07019; uncharacterized protein D APECO1_1968 yaaH; conserved hypothetical protein K07034 K07034; uncharacterized protein D APECO1_953 conserved hypothetical protein K07039 K07039; uncharacterized protein D APECO1_4082 ypfJ; conserved hypothetical protein K07054 K07054; uncharacterized protein D APECO1_4260 yfcH; putative sugar nucleotide epimerase K07071 K07071; uncharacterized protein D APECO1_3279 yraQ; conserved hypothetical protein K07089 K07089; uncharacterized protein D APECO1_4237 yfcA; putative structural protein K07090 K07090; uncharacterized protein D APECO1_4264 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein D APECO1_2171 ytfJ; conserved hypothetical protein K07109 K07109; uncharacterized protein D APECO1_3440 ytfJ; putative transcriptional regulator K07109 K07109; uncharacterized protein D APECO1_1110 yeeE; predicted inner membrane protein K07112 K07112; uncharacterized protein D APECO1_970 yedE; conserved hypothetical protein K07112 K07112; uncharacterized protein D APECO1_1360 abrB; putative transport protein AbrB K07120 K07120; uncharacterized protein D APECO1_3283 yraM; conserved hypothetical protein K07121 K07121; uncharacterized protein D APECO1_2378 yjcO; conserved hypothetical protein K07126 K07126; uncharacterized protein D APECO1_919 yecN; conserved hypothetical protein K07136 K07136; uncharacterized protein D APECO1_3224 yhcC; putative Fe-S oxidoreductase K07139 K07139; uncharacterized protein D APECO1_52 ycbX; YcbX K07140 K07140; MOSC domain-containing protein D APECO1_4399 conserved hypothetical protein K07148 K07148; uncharacterized protein D APECO1_3535 yqgA; conserved hypothetical protein K07150 K07150; uncharacterized protein D APECO1_3568 yggU; conserved hypothetical protein K09131 K09131; uncharacterized protein D APECO1_1424 conserved hypothetical protein K09158 K09158; uncharacterized protein D APECO1_294 ycgN; conserved hypothetical protein K09160 K09160; uncharacterized protein D APECO1_4270 yfbU; conserved hypothetical protein K09161 K09161; uncharacterized protein D APECO1_1621 conserved hypothetical protein K09768 K09768; uncharacterized protein D APECO1_367 yciI; conserved hypothetical protein K09780 K09780; uncharacterized protein D APECO1_995 yedI; putative methyl-independent mismatch repair protein K09781 K09781; uncharacterized protein D APECO1_852 yeaH; conserved hypothetical protein K09786 K09786; uncharacterized protein D APECO1_1547 ybaN; conserved hypothetical protein K09790 K09790; uncharacterized protein D APECO1_2841 yibQ; predicted polysaccharide deacetylase K09798 K09798; uncharacterized protein D APECO1_1105 yeeX; putative alpha helix protein K09802 K09802; uncharacterized protein D APECO1_3611 yggE; conserved hypothetical protein K09807 K09807; uncharacterized protein D APECO1_1217 ybjX; conserved hypothetical protein K09824 virK; uncharacterized protein D APECO1_58 conserved hypothetical protein K09857 K09857; uncharacterized protein D APECO1_1972 yaaA; conserved hypothetical protein K09861 K09861; uncharacterized protein D APECO1_2476 yjaG; conserved hypothetical protein K09891 K09891; uncharacterized protein D APECO1_2596 yihI; conserved hypothetical protein K09894 K09894; uncharacterized protein D APECO1_3619 ygfB; conserved hypothetical protein K09895 K09895; uncharacterized protein D APECO1_2603 conserved hypothetical protein K09896 K09896; uncharacterized protein D APECO1_2705 conserved hypothetical protein K09897 K09897; uncharacterized protein D APECO1_4269 yfbV; conserved hypothetical protein K09899 K09899; uncharacterized protein D APECO1_363 yciU; conserved hypothetical protein K09901 K09901; uncharacterized protein D APECO1_292 conserved hypothetical protein K09902 K09902; uncharacterized protein D APECO1_925 yecM; conserved hypothetical protein K09907 K09907; uncharacterized protein D APECO1_69 conserved hypothetical protein K09909 K09909; uncharacterized protein D APECO1_1866 yacL; conserved hypothetical protein K09910 K09910; uncharacterized protein D APECO1_61 ycbG; YcbG K09911 K09911; uncharacterized protein D APECO1_1647 yaiL; nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein D APECO1_149 yceH; conserved hypothetical protein K09915 K09915; uncharacterized protein D APECO1_3380 yqiB; putative dehydrogenase K09920 K09920; uncharacterized protein D APECO1_2666 yigA; conserved hypothetical protein K09921 K09921; uncharacterized protein D APECO1_3562 yggL; conserved hypothetical protein K09923 K09923; uncharacterized protein D APECO1_28 ycaQ; YcaQ K09927 K09927; uncharacterized protein D APECO1_4331 yfaT; conserved hypothetical protein K09934 K09934; uncharacterized protein D APECO1_1170 yegP; conserved hypothetical protein K09946 K09946; uncharacterized protein D APECO1_3912 conserved hypothetical protein K09968 K09968; uncharacterized protein D APECO1_1531 ybaP; putative ligase K09973 K09973; uncharacterized protein D APECO1_2522 yijF; conserved hypothetical protein K09974 K09974; uncharacterized protein D APECO1_811 ydjR; conserved hypothetical protein ydjR K09975 K09975; uncharacterized protein D APECO1_556 ydbL; conserved hypothetical protein K09978 K09978; uncharacterized protein D APECO1_3276 yhbP; conserved hypothetical protein K09979 K09979; uncharacterized protein D APECO1_2211 yjfI; conserved hypothetical protein K09980 K09980; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024