+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Fragaria vesca (woodland strawberry)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 101311226 mediator of RNA polymerase II transcription subunit 36a K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 101303413 nucleolar protein 56-like K14564 NOP56; nucleolar protein 56 D 101304523 probable nucleolar protein 5-2 K14565 NOP58; nucleolar protein 58 D 101301807 NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 101299964 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 101306566 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 101300443 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 101291682 H/ACA ribonucleoprotein complex subunit 3-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 101310915 H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 B 90S particles C U3 small nucleolar RNA-associated proteins D 101309368 U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 101291639 U3 small nucleolar ribonucleoprotein protein IMP4-like K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 101305072 U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 101301520 neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 101301122 ribosomal RNA-processing protein 7 homolog K14545 RRP7; ribosomal RNA-processing protein 7 D 101302763 periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2 D 101303505 nucleolar protein 14 K14766 NOP14; nucleolar protein 14 D 101314853 something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 101291781 U3 small nucleolar RNA-associated protein 4 K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 101291998 WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 101314869 WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 101297150 U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 101293720 probable U3 small nucleolar RNA-associated protein 7 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 101302218 uncharacterized protein At3g06530 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 101292975 probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 101305390 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 101296240 transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 101309412 uncharacterized protein C57A7.06 K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 101294769 U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 101305649 WD repeat-containing protein 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 101296620 U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 101306725 U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 101302605 nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 101300553 small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 101303904 WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 101300279 nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 101305124 rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 101302294 rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 101312622 U3 small nucleolar RNA-associated protein 25 K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 101304090 ribosomal L1 domain-containing protein 1-like K14775 UTP30; ribosome biogenesis protein UTP30 D 101313827 ribosomal L1 domain-containing protein 1-like K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 101304765 DEAD-box ATP-dependent RNA helicase 32 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 101296380 DEAD-box ATP-dependent RNA helicase 51 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101314655 DEAD-box ATP-dependent RNA helicase 50 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101306892 DEAD-box ATP-dependent RNA helicase 10 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 101295179 DEAD-box ATP-dependent RNA helicase 36 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 101303251 DEAD-box ATP-dependent RNA helicase 57 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 101308806 probable pre-mRNA-splicing factor ATP-dependent RNA helicase K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 101311940 probable pre-mRNA-splicing factor ATP-dependent RNA helicase K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 101301950 putative ATP-dependent RNA helicase PB1A10.06c K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 101293970 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D 105352043 eukaryotic initiation factor 4A-3-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] D 101296481 eukaryotic initiation factor 4A-3-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 101315111 ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 101299064 RNA exonuclease 4-like K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 101296468 RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 101295396 lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 101307535 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 101308338 casein kinase II subunit alpha-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 101313161 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 101293415 casein kinase II subunit alpha-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 101304912 putative casein kinase II subunit beta-4 K03115 CSNK2B; casein kinase II subunit beta D 101304386 putative casein kinase II subunit beta-4 K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 101293818 protein AATF K14782 AATF; protein AATF/BFR2 D 101313501 protein CMSS1 K14784 CMS1; protein CMS1 D 101305881 ribosomal RNA small subunit methyltransferase nep-1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 101313143 activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein D 101291840 protein kri1 K14786 KRI1; protein KRI1 D 101292552 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 101309124 uncharacterized LOC101309124 K06961 KRR1; ribosomal RNA assembly protein D 101299536 uncharacterized LOC101299536 K06961 KRR1; ribosomal RNA assembly protein D 101291893 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 101301383 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 101315157 uncharacterized LOC101315157 K06961 KRR1; ribosomal RNA assembly protein D 101291340 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 101314470 uncharacterized LOC101314470 K06961 KRR1; ribosomal RNA assembly protein D 101307702 uncharacterized LOC101307702 K06961 KRR1; ribosomal RNA assembly protein D 105351702 uncharacterized LOC105351702 K06961 KRR1; ribosomal RNA assembly protein D 105350900 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 101305145 multiple RNA-binding domain-containing protein 1 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 101313056 UPF0202 protein At1g10490 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 101292789 nucleolin 1 K11294 NCL; nucleolin D 101308921 nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2 D 101294485 pumilio homolog 23 K14790 NOP9; nucleolar protein 9 D 101292794 PIN2/TERF1-interacting telomerase inhibitor 1 K11135 PINX1; Pin2-interacting protein X1 D 101310799 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 101310005 probable RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 101294678 protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5 D 101311255 U3 small nucleolar RNA-interacting protein 2-like K14793 RRP9; ribosomal RNA-processing protein 9 D 101294113 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 101292612 uncharacterized LOC101292612 K14794 RRP12; ribosomal RNA-processing protein 12 D 101309566 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 101306491 rRNA biogenesis protein rrp36-like K14795 RRP36; ribosomal RNA-processing protein 36 D 101303487 rRNA biogenesis protein rrp36-like K14795 RRP36; ribosomal RNA-processing protein 36 D 101292557 ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 101299339 DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 101293786 serine/threonine-protein kinase RIO1-like K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 101301673 serine/threonine-protein kinase rio1-like K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 101312018 serine/threonine-protein kinase rio2-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D 101301816 serine/threonine-protein kinase rio2-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 101302985 probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 101300730 probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 101312917 probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 101311993 methyltransferase-like protein 5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 101311738 bystin K14797 ENP1; essential nuclear protein 1 D 101306787 protein LTV1 homolog K14798 LTV1; protein LTV1 D 101291975 protein LTV1 homolog K14798 LTV1; protein LTV1 D 101295525 RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1 D 101295715 RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1 D 105350132 GTP-binding nuclear protein Ran-1-like K07936 RAN; GTP-binding nuclear protein Ran D 101304165 RAN; RAN, member RAS oncogene family K07936 RAN; GTP-binding nuclear protein Ran D 101310732 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran D 101293302 adenylate kinase isoenzyme 6 homolog K18532 AK6; adenylate kinase [EC:2.7.4.3] D 101292309 pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 101294204 pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2 D 101290975 ribosome biogenesis protein TSR3 homolog K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 101312484 programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4 D 101302865 programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 101299713 exportin-1-like K14290 XPO1; exportin-1 D 101304713 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 101308112 importin subunit beta-1-like K14293 KPNB1; importin subunit beta-1 D 101304105 importin subunit beta-1-like K14293 KPNB1; importin subunit beta-1 D 101311481 importin subunit beta-1-like K14293 KPNB1; importin subunit beta-1 D 101294129 transportin-1 K18752 TNPO1; transportin-1 D 101311583 probable importin subunit beta-4 K20221 IPO4; importin-4 D 101293385 importin-5 K20222 IPO5; importin-5 D 101308621 importin-5-like K20222 IPO5; importin-5 D 101294937 importin subunit beta-3-like K20222 IPO5; importin-5 D 101306324 importin beta-like SAD2 K20223 IPO7; importin-7 D 101294462 importin-9 K20224 IPO9; importin-9 C Other pre-40S particles D 101301483 phospholipid-transporting ATPase 3 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 101314786 phospholipid-transporting ATPase 1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 101296217 phospholipid-transporting ATPase 1-like K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 101295047 eukaryotic translation initiation factor 3 subunit J-A-like K03245 EIF3J; translation initiation factor 3 subunit J D 101306125 probable protein phosphatase 2C 28 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101294038 probable protein phosphatase 2C 22 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101296420 probable protein phosphatase 2C 27 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101297733 probable protein phosphatase 2C 27 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101302887 probable protein phosphatase 2C 27 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101292980 probable protein phosphatase 2C 13 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101296600 probable protein phosphatase 2C 47 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101295865 probable protein phosphatase 2C 49 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 101291113 ABC transporter E family member 2 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 101300800 DEAD-box ATP-dependent RNA helicase 14-like K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101310702 DEAD-box ATP-dependent RNA helicase 20 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101297138 DEAD-box ATP-dependent RNA helicase 20 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101299472 DEAD-box ATP-dependent RNA helicase 40 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101299689 DEAD-box ATP-dependent RNA helicase 14 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101293860 DEAD-box ATP-dependent RNA helicase 52A-like K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 101296380 DEAD-box ATP-dependent RNA helicase 51 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101314655 DEAD-box ATP-dependent RNA helicase 50 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 101312203 DEAD-box ATP-dependent RNA helicase 7 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 101309944 DEAD-box ATP-dependent RNA helicase 3, chloroplastic K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 101306385 DEAD-box ATP-dependent RNA helicase 13 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 101307177 DEAD-box ATP-dependent RNA helicase 28 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 101303264 DEAD-box ATP-dependent RNA helicase 17 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 101293073 DEAD-box ATP-dependent RNA helicase 1 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 101312216 putative DEAD-box ATP-dependent RNA helicase 29 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 101314996 DEAD-box ATP-dependent RNA helicase 18 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 101295240 DEAD-box ATP-dependent RNA helicase 18-like K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 101296582 DEAD-box ATP-dependent RNA helicase 18-like K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 101311964 DEAD-box ATP-dependent RNA helicase 16 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D 101312256 DEAD-box ATP-dependent RNA helicase 5 K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7] D 101306821 superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D 101308090 superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 101303188 guanine nucleotide-binding protein-like NSN1 K14538 NUG1; nuclear GTP-binding protein D 101314566 nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein D 101297508 nucleolar GTP-binding protein 1-like K06943 NOG1; nucleolar GTP-binding protein D 101309072 nucleolar GTP-binding protein 1-like K06943 NOG1; nucleolar GTP-binding protein D 101310551 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D 101310858 large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 101293144 elongation factor Tu GTP-binding domain-containing protein 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 101299262 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D 101314619 small RNA degrading nuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 101309085 small RNA degrading nuclease 1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 101312512 5'-3' exoribonuclease 3 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E 101315187 ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 101301798 ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 101291764 probable ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 101305355 uncharacterized LOC101305355 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases D 101306640 polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 101296454 ABC transporter F family member 1 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 101301015 dnaJ homolog subfamily C member 21-like K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 105351334 dnaJ homolog subfamily C member 21-like K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 105351801 dnaJ homolog subfamily C member 21-like K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 101300153 ABC transporter F family member 4-like K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 101306580 eukaryotic translation initiation factor 6-2-like K03264 EIF6; translation initiation factor 6 D 101296370 eukaryotic translation initiation factor 6-2 K03264 EIF6; translation initiation factor 6 D 101304774 stromal 70 kDa heat shock-related protein, chloroplastic K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101300979 probable mediator of RNA polymerase II transcription subunit 37e K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101306205 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101306495 heat shock 70 kDa protein II-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101297476 heat shock cognate 70 kDa protein 2-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101294000 heat shock 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101303062 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101292292 heat shock 70 kDa protein 18-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101299993 stromal 70 kDa heat shock-related protein, chloroplastic-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101313219 probable mediator of RNA polymerase II transcription subunit 37c K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101312639 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101312933 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101311491 probable mediator of RNA polymerase II transcription subunit 37e K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101305698 probable mediator of RNA polymerase II transcription subunit 37c K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101314130 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101295766 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101314413 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101296051 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101314700 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101296336 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101296913 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101296621 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101297200 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101297494 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101298080 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101315281 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101314994 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 105349265 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101298665 heat shock 70 kDa protein II-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101298953 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101299825 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101291093 heat shock cognate 70 kDa protein 2 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101291669 heat shock cognate 70 kDa protein 2-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101295529 heat shock cognate 70 kDa protein 1-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101310620 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101297761 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101310329 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 101299190 mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4 D 101293341 60S ribosomal export protein NMD3-like K07562 NMD3; 60S ribosomal export protein NMD3 D 101294648 60S ribosomal export protein NMD3-like K07562 NMD3; 60S ribosomal export protein NMD3 D 105350132 GTP-binding nuclear protein Ran-1-like K07936 RAN; GTP-binding nuclear protein Ran D 101304165 RAN; RAN, member RAS oncogene family K07936 RAN; GTP-binding nuclear protein Ran D 101310732 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran D 101294626 zinc finger protein 622 K14816 REI1; pre-60S factor REI1 D 101314905 ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 101299713 exportin-1-like K14290 XPO1; exportin-1 D 101304713 importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D 101308112 importin subunit beta-1-like K14293 KPNB1; importin subunit beta-1 D 101304105 importin subunit beta-1-like K14293 KPNB1; importin subunit beta-1 D 101311481 importin subunit beta-1-like K14293 KPNB1; importin subunit beta-1 D 101294129 transportin-1 K18752 TNPO1; transportin-1 D 101311583 probable importin subunit beta-4 K20221 IPO4; importin-4 D 101293385 importin-5 K20222 IPO5; importin-5 D 101308621 importin-5-like K20222 IPO5; importin-5 D 101294937 importin subunit beta-3-like K20222 IPO5; importin-5 D 101306324 importin beta-like SAD2 K20223 IPO7; importin-7 D 101294462 importin-9 K20224 IPO9; importin-9 D 101298254 dual specificity protein phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 101296122 uncharacterized LOC101296122 K14827 IPI1; pre-rRNA-processing protein IPI1 D 101301637 protein ROOT INITIATION DEFECTIVE 3 K14829 IPI3; pre-rRNA-processing protein IPI3 D 101295030 protein ROOT INITIATION DEFECTIVE 3-like K14829 IPI3; pre-rRNA-processing protein IPI3 D 105351209 protein ROOT INITIATION DEFECTIVE 3-like K14829 IPI3; pre-rRNA-processing protein IPI3 D 101296866 protein LAS1 K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D 101310503 E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 101302588 transcription factor 25 K24970 TCF25; transcription factor 25 D 101295316 nuclear export mediator factor Nemf K24971 NEMF; nuclear export mediator factor NEMF D 101310413 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase D 101293615 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase D 101307653 NPL4-like protein 2 K14015 NPLOC4; nuclear protein localization protein 4 D 101304529 ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1 D 101292678 ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1 D 101310809 ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1 D 101313127 ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1 D 101312232 putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] D 101313737 ankyrin repeat and zinc finger domain-containing protein 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 101304354 ribosome biogenesis protein BRX1 K14820 BRX1; ribosome biogenesis protein BRX1 D 101291472 probable rRNA-processing protein EBP2 homolog K14823 EBP2; rRNA-processing protein EBP2 D 101313989 ribosome biogenesis protein bop1 K14824 ERB1; ribosome biogenesis protein ERB1 D 101293718 peptidyl-prolyl cis-trans isomerase FKBP43 K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D 101292064 peptidyl-prolyl cis-trans isomerase FKBP53 K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D 101301933 protein MAK16 homolog K14831 MAK16; protein MAK16 D 101293825 protein MAK16 homolog K14831 MAK16; protein MAK16 D 101311300 CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21 D 101305499 midasin K14572 MDN1; midasin D 101298009 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 101299018 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 101297018 nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2 D 101301372 nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2 D 101308354 nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 101293286 25S rRNA (cytosine-C(5))-methyltransferase nop2 K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 101293353 RNA-binding protein 28 K14573 NOP4; nucleolar protein 4 D 101294023 RNA-binding protein 28-like K14573 NOP4; nucleolar protein 4 D 101311380 RNA-binding protein 34 K14837 NOP12; nucleolar protein 12 D 101295337 uncharacterized RNA-binding protein C1827.05c K14838 NOP15; nucleolar protein 15 D 101305622 uncharacterized LOC101305622 K14839 NOP16; nucleolar protein 16 D 101296520 uncharacterized protein At2g40430 K14840 NOP53; nucleolar protein 53 D 101303117 WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 101294020 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 101302202 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 101302807 pescadillo homolog K14843 PES1; pescadillo D 101296479 pumilio homolog 24 K14844 PUF6; pumilio homology domain family member 6 D 101310799 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 101305561 decapping nuclease DXO homolog, chloroplastic K14845 RAI1; RAT1-interacting protein D 101306151 cell division control protein 48 homolog C K14571 RIX7; ribosome biogenesis ATPase D 101299812 ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 101305488 ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 101294293 glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1 D 101314184 ribosomal RNA processing protein 1 homolog K14849 RRP1; ribosomal RNA-processing protein 1 D 101307136 ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 101294113 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 101292612 uncharacterized LOC101292612 K14794 RRP12; ribosomal RNA-processing protein 12 D 101309566 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 101294537 ribosomal RNA-processing protein 17-like K14851 RRP17; ribosomal RNA-processing protein 17 D 101293421 ribosomal RNA-processing protein 17-like K14851 RRP17; ribosomal RNA-processing protein 17 D 101302862 ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 101310272 notchless protein homolog K14855 RSA4; ribosome assembly protein 4 D 101308634 protein SDA1 homolog K14856 SDA1; protein SDA1 D 101296153 adoMet-dependent rRNA methyltransferase spb1 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 101307654 peter Pan-like protein K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 101298301 uncharacterized LOC101298301 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 101295837 ribosome biogenesis protein wdr12 K14863 WDR12; ribosome biogenesis protein D 101314901 zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 101305257 protein BCCIP homolog K15262 BCP1; protein BCP1 C 101308608 UBP1-associated proteins 1C K15263 LYER; cell growth-regulating nucleolar protein C 101313826 probable 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 101296509 uncharacterized LOC101296509 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 101294591 GTPase Era, mitochondrial K03595 era; GTPase C 101310683 GTP-binding protein ERG K03595 era; GTPase C 101307641 nucleosome assembly protein 1;2 K26142 NOPCHAP1; NOP protein chaperone 1 C 101309066 proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein C 101296324 mitochondrial ribosome-associated GTPase 1 K19828 MTG1; mitochondrial GTPase 1 C 101292243 mitochondrial ribosome-associated GTPase 1 K19828 MTG1; mitochondrial GTPase 1 C 101314426 mitochondrial ribosome-associated GTPase 1 K19828 MTG1; mitochondrial GTPase 1 C 101301911 NO-associated protein 1, chloroplastic/mitochondrial-like K13427 NOA1; nitric-oxide synthase, plant [EC:1.14.13.39] C 101307253 NO-associated protein 1, chloroplastic/mitochondrial-like K13427 NOA1; nitric-oxide synthase, plant [EC:1.14.13.39] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 101303413 nucleolar protein 56-like K14564 NOP56; nucleolar protein 56 D 101294198 60S ribosomal protein L7a-2 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D 101310832 60S ribosomal protein L7a-2-like K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 101299964 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 101291682 H/ACA ribonucleoprotein complex subunit 3-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors D 101293469 probable 28S rRNA (cytosine-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D 101304836 uncharacterized LOC101304836 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D 101300625 uncharacterized LOC101300625 K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D 101294093 probable methyltransferase-like protein 15 K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D 101303306 uncharacterized LOC101303306 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D 101291775 uncharacterized LOC101291775 K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D 101295543 putative RNA methyltransferase At5g10620 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D 105351242 uncharacterized LOC105351242 K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D 101308808 uncharacterized LOC101308808 K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D 101291775 uncharacterized LOC101291775 K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] B ribosomal protein modification factors B rRNA processing factors C 101314843 uncharacterized LOC101314843 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases B GTPases C 101294591 GTPase Era, mitochondrial K03595 era; GTPase C 101310683 GTP-binding protein ERG K03595 era; GTPase C 101305720 uncharacterized LOC101305720 K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C 101312409 putative GTP-binding protein 6 K03665 hflX; GTPase B Other maturation factors C 101290937 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C 101312214 probable ribosome-binding factor A, chloroplastic K02834 rbfA; ribosome-binding factor A C 101295384 uncharacterized LOC101295384 K07574 yhbY; RNA-binding protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024