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Transcription Machinery - Gordonia phthalatica
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
E ACH46_03820 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E ACH46_15400 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E ACH46_16495 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E ACH46_16490 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E ACH46_09880 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E ACH46_09305 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E ACH46_09220 RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E ACH46_07940 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ACH46_17930 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ACH46_15175 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ACH46_16160 RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ACH46_20650 RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ACH46_06215 RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ACH46_17590 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ACH46_06910 RNA polymerase sigma 70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
C Other transcription-related factors
D RNA polymerase-associated proteins
E ACH46_08725 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E ACH46_09825 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
E ACH46_16600 transcription termination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D Transcription elongation factors
E ACH46_05280 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E ACH46_07170 transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024