+D GENES KO
#
KEGG Orthology (KO) - Geobacillus sp. Y412MC61
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:gyc00010]
D GYMC61_0195 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D GYMC61_3003 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYMC61_0777 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYMC61_3440 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D GYMC61_3443 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYMC61_3135 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYMC61_3137 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYMC61_0790 glyceraldehyde-3-phosphate dehydrogenase, type I K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D GYMC61_3136 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GYMC61_3134 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GYMC61_3133 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYMC61_3098 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYMC61_0778 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYMC61_1832 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GYMC61_3319 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GYMC61_1833 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GYMC61_3318 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GYMC61_3320 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1519 Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1834 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_2090 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GYMC61_2091 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GYMC61_1361 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYMC61_0742 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_3296 Aldehyde dehydrogenase (NAD(+)) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D GYMC61_0711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0723 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0757 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_2713 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GYMC61_2723 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GYMC61_1388 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYMC61_1242 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GYMC61_0658 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GYMC61_3310 glycoside hydrolase family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYMC61_3481 glycoside hydrolase family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYMC61_0345 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYMC61_2667 Beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYMC61_3509 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYMC61_1785 PTS system, glucose-specific IIBC subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:gyc00020]
D GYMC61_0781 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D GYMC61_2141 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GYMC61_0782 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GYMC61_1796 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GYMC61_1797 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_2090 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GYMC61_2091 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GYMC61_1993 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GYMC61_1992 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GYMC61_0844 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GYMC61_0845 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GYMC61_0843 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GYMC61_1305 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GYMC61_1120 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GYMC61_0783 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GYMC61_2189 malate/quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D GYMC61_1852 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D GYMC61_0658 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GYMC61_1832 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GYMC61_3319 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GYMC61_1833 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GYMC61_3318 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GYMC61_3320 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1519 Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1834 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:gyc00030]
D GYMC61_3003 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYMC61_0348 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GYMC61_0326 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GYMC61_1959 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYMC61_2122 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GYMC61_3442 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GYMC61_3427 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GYMC61_1018 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D GYMC61_3332 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D GYMC61_0368 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D GYMC61_1388 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYMC61_1242 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GYMC61_0044 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYMC61_2703 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GYMC61_2781 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D GYMC61_2704 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D GYMC61_3443 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYMC61_3440 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D GYMC61_0777 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:gyc00040]
D GYMC61_2699 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D GYMC61_1642 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GYMC61_3344 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GYMC61_3361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_3380 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_2736 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GYMC61_1959 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYMC61_2734 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D GYMC61_2735 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D GYMC61_2687 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D GYMC61_2688 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D GYMC61_2724 oxidoreductase domain protein K14273 xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179]
D GYMC61_1253 Aldehyde Dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:gyc00051]
D GYMC61_3301 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYMC61_3528 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GYMC61_1242 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GYMC61_1239 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D GYMC61_0777 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYMC61_3440 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D GYMC61_2794 Mannitol dehydrogenase domain protein K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D GYMC61_2650 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D GYMC61_2688 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D GYMC61_3443 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYMC61_3135 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYMC61_3427 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GYMC61_2649 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYMC61_2795 Protein-N(pi)-phosphohistidine--sugar phosphotransferase K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:gyc00052]
D GYMC61_2713 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GYMC61_2723 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GYMC61_0536 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GYMC61_0538 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D GYMC61_0537 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYMC61_3207 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYMC61_3361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_3380 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_1388 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYMC61_1242 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GYMC61_0195 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D GYMC61_0534 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D GYMC61_0530 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D GYMC61_3214 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GYMC61_0528 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D GYMC61_2733 conserved hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D GYMC61_0777 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYMC61_3506 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYMC61_1406 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:gyc00053]
D GYMC61_1642 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GYMC61_3344 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GYMC61_0834 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GYMC61_2933 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GYMC61_2932 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYMC61_2931 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D GYMC61_2736 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:gyc00500]
D GYMC61_3507 PTS system, sucrose-specific IIBC subunit K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYMC61_2812 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYMC61_3506 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYMC61_1406 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D GYMC61_3361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_3380 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_2669 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2137 PTS system, lactose-specific IIa component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2670 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2134 PTS system, lactose/cellobiose family IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2668 PTS system, cellobiose-specific IIC subunit K02761 celB; cellobiose PTS system EIIC component
D GYMC61_2135 PTS system, cellobiose-specific IIC subunit K02761 celB; cellobiose PTS system EIIC component
D GYMC61_3310 glycoside hydrolase family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYMC61_3481 glycoside hydrolase family 1 K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYMC61_0345 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYMC61_2667 Beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYMC61_0559 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D GYMC61_0560 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D GYMC61_0561 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D GYMC61_0558 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D GYMC61_0562 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D GYMC61_0681 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D GYMC61_3273 Glucan 1,4-alpha-maltohexaosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D GYMC61_1514 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D GYMC61_1510 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D GYMC61_1933 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D GYMC61_3509 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYMC61_2554 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D GYMC61_2553 alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D GYMC61_1388 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYMC61_1242 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GYMC61_0195 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D GYMC61_3003 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYMC61_3301 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:gyc00520]
D GYMC61_3509 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYMC61_0407 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D GYMC61_0404 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D GYMC61_0405 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D GYMC61_3301 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYMC61_0155 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GYMC61_0154 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GYMC61_0043 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GYMC61_2813 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D GYMC61_3400 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYMC61_3441 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYMC61_1710 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYMC61_3256 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D GYMC61_3257 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D GYMC61_3253 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D GYMC61_3221 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D GYMC61_3209 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D GYMC61_2725 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D GYMC61_2727 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D GYMC61_2705 glycoside hydrolase family 39 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D GYMC61_2711 Xylan 1,4-beta-xylosidase K22268 xylA; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D GYMC61_1785 PTS system, glucose-specific IIBC subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D GYMC61_0195 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D GYMC61_1388 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYMC61_1242 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GYMC61_3361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_3380 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_1642 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GYMC61_3344 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GYMC61_0536 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GYMC61_0538 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D GYMC61_0537 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYMC61_3207 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYMC61_3214 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GYMC61_0834 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GYMC61_3003 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYMC61_3528 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GYMC61_1239 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D GYMC61_0559 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D GYMC61_0560 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:gyc00620]
D GYMC61_0711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0723 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0757 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_2090 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GYMC61_2091 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GYMC61_1832 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GYMC61_3319 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GYMC61_1833 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GYMC61_3318 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GYMC61_3320 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1519 Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1834 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_2297 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D GYMC61_0742 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GYMC61_0731 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYMC61_3472 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYMC61_1751 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D GYMC61_3098 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYMC61_0778 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYMC61_0776 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GYMC61_0243 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYMC61_2442 biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYMC61_0244 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYMC61_2441 Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYMC61_0775 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GYMC61_1288 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_3296 Aldehyde dehydrogenase (NAD(+)) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D GYMC61_1361 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYMC61_3317 FAD linked oxidase domain protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D GYMC61_1380 2,5-didehydrogluconate reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D GYMC61_2154 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GYMC61_2913 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GYMC61_0198 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GYMC61_2371 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GYMC61_2232 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GYMC61_1852 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D GYMC61_0783 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GYMC61_2189 malate/quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D GYMC61_1305 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GYMC61_1120 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GYMC61_0658 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D GYMC61_2370 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_0859 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:gyc00630]
D GYMC61_1480 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D GYMC61_0711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0723 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0757 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_2370 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D GYMC61_0783 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GYMC61_0781 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D GYMC61_2141 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_2956 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D GYMC61_0784 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D GYMC61_0306 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D GYMC61_0307 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D GYMC61_0278 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D GYMC61_0279 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D GYMC61_2369 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D GYMC61_2367 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D GYMC61_2368 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D GYMC61_3042 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D GYMC61_2117 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_2480 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_3425 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GYMC61_0215 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D GYMC61_0216 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D GYMC61_0214 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_3084 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D GYMC61_2365 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D GYMC61_3529 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GYMC61_2703 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GYMC61_1341 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GYMC61_0347 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D GYMC61_2543 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D GYMC61_2184 Acetamidase/Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:gyc00640]
D GYMC61_0711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0723 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0757 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0731 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYMC61_3472 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYMC61_1751 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D GYMC61_0265 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D GYMC61_2853 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D GYMC61_0266 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D GYMC61_2852 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D GYMC61_0267 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_3450 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D GYMC61_2219 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_0776 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GYMC61_0243 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYMC61_2442 biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYMC61_0244 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYMC61_2441 Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYMC61_0775 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GYMC61_2754 Acetylornithine transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D GYMC61_2755 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GYMC61_0307 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D GYMC61_0306 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D GYMC61_0278 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D GYMC61_0279 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D GYMC61_1992 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GYMC61_1993 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GYMC61_2217 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D GYMC61_2801 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D GYMC61_1361 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYMC61_0496 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D GYMC61_1380 2,5-didehydrogluconate reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:gyc00650]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3452 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2861 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2279 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2109 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_3088 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_2280 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_2444 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_3450 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D GYMC61_0263 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D GYMC61_0261 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D GYMC61_2297 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D GYMC61_2956 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D GYMC61_0784 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D GYMC61_0844 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GYMC61_0845 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GYMC61_0843 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GYMC61_2754 Acetylornithine transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D GYMC61_2755 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GYMC61_2090 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GYMC61_2091 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GYMC61_2443 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D GYMC61_3564 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D GYMC61_2277 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D GYMC61_2816 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D GYMC61_0855 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GYMC61_1252 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GYMC61_0856 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:gyc00660]
D GYMC61_0855 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GYMC61_1252 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GYMC61_0856 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GYMC61_1992 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GYMC61_1993 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GYMC61_0861 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GYMC61_3567 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GYMC61_3568 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GYMC61_0862 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GYMC61_0860 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:gyc00562]
D GYMC61_1841 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GYMC61_3322 oxidoreductase domain protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D GYMC61_2217 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D GYMC61_2801 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D GYMC61_3135 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:gyc00190]
D GYMC61_3413 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D GYMC61_3412 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D GYMC61_3411 NADH dehydrogenase (ubiquinone) 30 kDa subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D GYMC61_3410 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D GYMC61_3409 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D GYMC61_3408 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D GYMC61_3407 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D GYMC61_3406 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D GYMC61_3405 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D GYMC61_3404 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D GYMC61_3403 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D GYMC61_3029 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D GYMC61_3035 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D GYMC61_0844 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GYMC61_0845 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GYMC61_0843 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GYMC61_1686 Rieske (2Fe-2S) iron-sulphur domain protein K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8]
D GYMC61_0488 Rieske (2Fe-2S) iron-sulphur domain protein K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8]
D GYMC61_0489 Cytochrome b/b6 domain protein K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D GYMC61_0490 cytochrome c class I K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D GYMC61_1854 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GYMC61_1858 cytochrome c oxidase, subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D GYMC61_1857 Cytochrome-c oxidase K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D GYMC61_2384 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D GYMC61_1856 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D GYMC61_2385 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D GYMC61_1855 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D GYMC61_1853 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D GYMC61_3520 cytochrome aa3 quinol oxidase, subunit IV K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D GYMC61_3521 cytochrome aa3 quinol oxidase, subunit III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D GYMC61_3522 cytochrome aa3 quinol oxidase, subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D GYMC61_3523 quinol oxidase AA3, subunit II K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D GYMC61_2910 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GYMC61_0579 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GYMC61_2909 cytochrome bd-type ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GYMC61_0578 cytochrome bd-type quinol oxidase, subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GYMC61_3417 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GYMC61_3415 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GYMC61_3416 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GYMC61_3418 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GYMC61_3414 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GYMC61_3421 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GYMC61_3419 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GYMC61_3420 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GYMC61_0433 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D GYMC61_3168 HAD-superfamily hydrolase, subfamily IA, variant 1 K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:gyc00680]
D GYMC61_0742 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GYMC61_1341 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D GYMC61_3425 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GYMC61_3133 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYMC61_0783 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GYMC61_3443 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYMC61_3440 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D GYMC61_0777 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYMC61_0731 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYMC61_3472 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYMC61_0711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0723 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0757 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_3134 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GYMC61_0432 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GYMC61_1454 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GYMC61_1806 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:gyc00910]
D GYMC61_2184 Acetamidase/Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D GYMC61_2675 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GYMC61_2635 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_2636 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_2638 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_2676 molybdopterin oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D GYMC61_2678 nitrite reductase (NAD(P)H), large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D GYMC61_2677 nitrite reductase (NAD(P)H), small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D GYMC61_1556 Nitric-oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D GYMC61_2684 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D GYMC61_1045 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GYMC61_0445 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GYMC61_2117 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_2480 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_2224 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GYMC61_2225 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:gyc00920]
D GYMC61_1292 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GYMC61_1291 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D GYMC61_0770 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D GYMC61_1294 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D GYMC61_2200 sulfite reductase (NADPH) flavoprotein, alpha chain K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D GYMC61_2201 sulfite reductase (NADPH) hemoprotein, beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D GYMC61_2915 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D GYMC61_2976 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D GYMC61_2395 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D GYMC61_0085 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GYMC61_2361 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GYMC61_0065 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GYMC61_2599 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D GYMC61_1667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GYMC61_0979 Cystathionine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:gyc00061]
D GYMC61_0776 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GYMC61_0243 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYMC61_2442 biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYMC61_0244 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYMC61_2441 Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYMC61_0775 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GYMC61_1973 acyl carrier protein K02078 acpP; acyl carrier protein
D GYMC61_1971 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GYMC61_1605 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GYMC61_1606 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GYMC61_2074 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_2495 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1972 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_2203 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_0738 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1799 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_0764 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_3390 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GYMC61_1636 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GYMC61_2858 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D GYMC61_1347 short-chain dehydrogenase/reductase SDR K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D GYMC61_1472 O-succinylbenzoate-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_1803 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_2975 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0734 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:gyc00071]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3087 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_0739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_2110 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_3088 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D GYMC61_0829 Enoyl-CoA hydratase/isomerase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_3450 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D GYMC61_0736 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GYMC61_1801 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GYMC61_2106 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GYMC61_2494 Butyryl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GYMC61_1472 O-succinylbenzoate-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_1803 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_2975 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0734 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0742 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:gyc00561]
D GYMC61_3529 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2220 dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D GYMC61_2221 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D GYMC61_2222 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D GYMC61_2150 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GYMC61_1970 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GYMC61_2579 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYMC61_0454 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GYMC61_1224 diacylglycerol kinase catalytic region K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GYMC61_2819 Triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D GYMC61_1083 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D GYMC61_1066 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D GYMC61_0528 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D GYMC61_2733 conserved hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:gyc00564]
D GYMC61_0461 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GYMC61_0527 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D GYMC61_2579 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYMC61_0454 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GYMC61_1224 diacylglycerol kinase catalytic region K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GYMC61_2623 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D GYMC61_0258 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D GYMC61_2038 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GYMC61_0988 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GYMC61_0989 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D GYMC61_2079 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D GYMC61_1621 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D GYMC61_3455 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D GYMC61_2721 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D GYMC61_1145 geranylgeranylglyceryl phosphate synthase family protein K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D GYMC61_3167 transferase hexapeptide repeat containing protein K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:gyc00600]
D GYMC61_0534 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D GYMC61_0528 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D GYMC61_2733 conserved hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:gyc00592]
D GYMC61_3087 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_0739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_2110 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:gyc00230]
D GYMC61_0362 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GYMC61_0368 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D GYMC61_1388 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYMC61_1242 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GYMC61_0044 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYMC61_1136 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GYMC61_1140 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D GYMC61_1138 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GYMC61_1135 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D GYMC61_1133 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D GYMC61_1134 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D GYMC61_1137 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D GYMC61_1130 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D GYMC61_1129 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D GYMC61_1132 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D GYMC61_1131 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GYMC61_1139 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GYMC61_0938 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GYMC61_3060 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D GYMC61_0369 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GYMC61_2420 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GYMC61_1903 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GYMC61_0061 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D GYMC61_0009 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GYMC61_0471 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GYMC61_0688 protein of unknown function DUF84 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D GYMC61_0851 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GYMC61_2387 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D GYMC61_1116 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GYMC61_1948 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GYMC61_1699 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GYMC61_0745 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYMC61_1700 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYMC61_0939 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GYMC61_1630 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D GYMC61_3539 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GYMC61_2923 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D GYMC61_1142 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D GYMC61_2826 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D GYMC61_3274 5'-Nucleotidase domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D GYMC61_2087 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D GYMC61_0128 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GYMC61_1291 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D GYMC61_1292 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GYMC61_3341 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D GYMC61_2771 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D GYMC61_2772 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D GYMC61_2773 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:gyc00240]
D GYMC61_1598 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYMC61_1917 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYMC61_3212 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYMC61_1597 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYMC61_1916 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYMC61_1914 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GYMC61_1915 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GYMC61_1919 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D GYMC61_1918 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D GYMC61_1921 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GYMC61_1920 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GYMC61_2035 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GYMC61_0471 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GYMC61_0898 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D GYMC61_3446 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GYMC61_0453 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GYMC61_0970 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D GYMC61_3060 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D GYMC61_3424 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYMC61_1912 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYMC61_3274 5'-Nucleotidase domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D GYMC61_2087 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D GYMC61_2165 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D GYMC61_0370 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D GYMC61_1028 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D GYMC61_1699 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GYMC61_0745 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYMC61_1700 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYMC61_1001 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D GYMC61_0024 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GYMC61_3437 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D GYMC61_2589 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GYMC61_2212 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D GYMC61_2213 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D GYMC61_2214 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D GYMC61_2211 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:gyc00250]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_0917 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GYMC61_0447 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GYMC61_1694 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GYMC61_1505 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GYMC61_1743 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D GYMC61_3512 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D GYMC61_0765 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D GYMC61_0760 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GYMC61_0761 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GYMC61_3539 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GYMC61_1131 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GYMC61_1914 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GYMC61_2754 Acetylornithine transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D GYMC61_2755 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GYMC61_2224 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GYMC61_2225 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D GYMC61_1045 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GYMC61_0445 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GYMC61_1043 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D GYMC61_2117 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_2480 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_1598 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYMC61_1917 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYMC61_3212 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYMC61_1597 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYMC61_1916 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYMC61_2961 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D GYMC61_1134 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D GYMC61_0155 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GYMC61_1136 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:gyc00260]
D GYMC61_3293 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYMC61_2061 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYMC61_2060 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GYMC61_3041 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GYMC61_3039 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D GYMC61_3040 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GYMC61_2573 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GYMC61_3425 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GYMC61_3529 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GYMC61_3134 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GYMC61_0432 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GYMC61_1454 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GYMC61_1150 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D GYMC61_0215 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D GYMC61_0216 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D GYMC61_0214 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_3084 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D GYMC61_0988 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GYMC61_2758 Betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D GYMC61_0979 Cystathionine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D GYMC61_1965 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GYMC61_1966 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GYMC61_2432 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GYMC61_2586 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GYMC61_2763 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D GYMC61_0481 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GYMC61_2939 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GYMC61_0480 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:gyc00270]
D GYMC61_0085 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GYMC61_2361 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GYMC61_0065 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GYMC61_0979 Cystathionine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D GYMC61_1668 Cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GYMC61_3010 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GYMC61_0978 Pyridoxal-5'-phosphate-dependent protein beta subunit K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D GYMC61_1523 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GYMC61_1524 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D GYMC61_0659 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GYMC61_0791 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D GYMC61_3461 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GYMC61_2546 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GYMC61_0977 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D GYMC61_1742 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D GYMC61_1903 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GYMC61_1741 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D GYMC61_1747 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D GYMC61_1745 2,3-diketo-5-methylthiopentyl-1-phosphate enolase K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5]
D GYMC61_1746 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D GYMC61_1748 Acireductone dioxygenase ARD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D GYMC61_1744 aminotransferase class I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D GYMC61_0717 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D GYMC61_3572 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYMC61_0976 Methyltransferase type 11 K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D GYMC61_0583 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D GYMC61_3293 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYMC61_2061 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYMC61_2060 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GYMC61_3041 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GYMC61_2599 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D GYMC61_1667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GYMC61_1156 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D GYMC61_0853 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_2395 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D GYMC61_1361 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYMC61_0783 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GYMC61_1965 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GYMC61_1966 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GYMC61_0432 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GYMC61_1454 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:gyc00280]
D GYMC61_0853 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GYMC61_0262 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D GYMC61_0265 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D GYMC61_2853 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D GYMC61_0266 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D GYMC61_2852 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D GYMC61_0267 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_3450 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D GYMC61_0736 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GYMC61_1801 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GYMC61_2106 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GYMC61_2494 Butyryl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_3087 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_0739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_2110 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_0307 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D GYMC61_0306 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D GYMC61_0278 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D GYMC61_0279 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D GYMC61_1800 6-phosphogluconate dehydrogenase NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D GYMC61_2366 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D GYMC61_2217 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D GYMC61_2801 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2755 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GYMC61_2443 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D GYMC61_3564 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D GYMC61_2277 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:gyc00290]
D GYMC61_2432 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GYMC61_2586 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GYMC61_0861 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GYMC61_3567 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GYMC61_3568 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GYMC61_0862 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GYMC61_0860 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D GYMC61_0855 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GYMC61_1252 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GYMC61_0856 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GYMC61_0858 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GYMC61_2871 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GYMC61_0853 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GYMC61_0262 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D GYMC61_0859 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:gyc00300]
D GYMC61_3041 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GYMC61_3293 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYMC61_2061 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYMC61_2060 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GYMC61_2062 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GYMC61_3111 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GYMC61_0495 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GYMC61_1596 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GYMC61_0677 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GYMC61_3033 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GYMC61_1251 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GYMC61_2592 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GYMC61_0382 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GYMC61_1823 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D GYMC61_1809 aminotransferase class I and II K00841 patA; aminotransferase [EC:2.6.1.-]
D GYMC61_1824 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D GYMC61_1888 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYMC61_1085 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:gyc00310]
D GYMC61_1797 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_2755 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GYMC61_1476 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:gyc00220]
D GYMC61_1599 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GYMC61_0760 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GYMC61_0761 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GYMC61_0149 arginase K01476 rocF; arginase [EC:3.5.3.1]
D GYMC61_2771 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D GYMC61_2772 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D GYMC61_2773 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D GYMC61_2511 Nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D GYMC61_2961 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D GYMC61_1134 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D GYMC61_2117 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_2480 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_1045 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GYMC61_0445 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_1594 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D GYMC61_1595 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D GYMC61_1593 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D GYMC61_1596 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:gyc00330]
D GYMC61_2928 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D GYMC61_3601 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D GYMC61_3602 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D GYMC61_1838 Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D GYMC61_2757 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D GYMC61_3460 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D GYMC61_3461 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GYMC61_2546 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GYMC61_0791 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1150 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D GYMC61_0412 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GYMC61_2511 Nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D GYMC61_0149 arginase K01476 rocF; arginase [EC:3.5.3.1]
D GYMC61_1044 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D GYMC61_0351 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D GYMC61_3090 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D GYMC61_1043 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D GYMC61_2872 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GYMC61_2873 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_1476 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:gyc00340]
D GYMC61_3157 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D GYMC61_3158 histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D GYMC61_3151 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D GYMC61_3153 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D GYMC61_3154 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D GYMC61_3152 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D GYMC61_3155 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D GYMC61_0482 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GYMC61_0718 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D GYMC61_0431 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D GYMC61_3156 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D GYMC61_1265 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D GYMC61_2159 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D GYMC61_2160 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D GYMC61_2157 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1150 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:gyc00350]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_0482 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GYMC61_2857 Glu/Leu/Phe/Val dehydrogenase dimerization region K00270 pdh; phenylalanine dehydrogenase [EC:1.4.1.20]
D GYMC61_1150 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D GYMC61_0742 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GYMC61_3113 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D GYMC61_2301 Extradiol ring-cleavage dioxygenase class III protein subunit B K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D GYMC61_3107 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D GYMC61_3108 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D GYMC61_3109 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D GYMC61_3110 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D GYMC61_2254 Cupin 2 conserved barrel domain protein K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D GYMC61_2286 Cupin 2 conserved barrel domain protein K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D GYMC61_2315 Cupin 2 conserved barrel domain protein K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D GYMC61_2313 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
D GYMC61_2256 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism [PATH:gyc00360]
D GYMC61_1150 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D GYMC61_2310 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D GYMC61_2870 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D GYMC61_2156 thioesterase superfamily protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D GYMC61_2833 phenylacetic acid catabolic family protein K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D GYMC61_2869 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D GYMC61_2868 phenylacetate-CoA oxygenase, PaaH subunit K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D GYMC61_2867 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D GYMC61_2830 phenylacetic acid catabolism protein K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D GYMC61_2866 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D GYMC61_2517 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D GYMC61_2863 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_3452 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2861 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2279 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2109 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2857 Glu/Leu/Phe/Val dehydrogenase dimerization region K00270 pdh; phenylalanine dehydrogenase [EC:1.4.1.20]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_0482 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GYMC61_1476 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D GYMC61_2535 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D GYMC61_0412 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GYMC61_2311 monooxygenase FAD-binding protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D GYMC61_2290 monooxygenase FAD-binding protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D GYMC61_2296 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D GYMC61_2297 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:gyc00380]
D GYMC61_0347 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D GYMC61_2293 amidohydrolase 2 K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D GYMC61_2295 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D GYMC61_1797 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_1150 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_0412 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GYMC61_2535 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gyc00400]
D GYMC61_0697 phospho-2-dehydro-3-deoxyheptonate aldolase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D GYMC61_0474 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D GYMC61_2881 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D GYMC61_0993 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D GYMC61_2880 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GYMC61_0484 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D GYMC61_0473 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D GYMC61_0476 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GYMC61_0477 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D GYMC61_0479 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D GYMC61_0478 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D GYMC61_0481 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GYMC61_2939 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GYMC61_0480 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GYMC61_0475 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D GYMC61_0913 amino acid-binding ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D GYMC61_0483 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D GYMC61_0914 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_0482 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GYMC61_2857 Glu/Leu/Phe/Val dehydrogenase dimerization region K00270 pdh; phenylalanine dehydrogenase [EC:1.4.1.20]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:gyc00410]
D GYMC61_0503 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D GYMC61_2754 Acetylornithine transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D GYMC61_2755 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_0502 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GYMC61_2212 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D GYMC61_2213 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D GYMC61_2214 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D GYMC61_2211 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_3450 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D GYMC61_2217 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D GYMC61_2801 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:gyc00430]
D GYMC61_3397 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GYMC61_2218 aminotransferase class-III K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D GYMC61_3512 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D GYMC61_0765 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D GYMC61_1045 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GYMC61_0445 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GYMC61_3472 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYMC61_1751 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D GYMC61_0731 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:gyc00450]
D GYMC61_1667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GYMC61_1668 Cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GYMC61_3010 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GYMC61_1523 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GYMC61_1524 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D GYMC61_3072 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D GYMC61_3149 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GYMC61_3099 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GYMC61_1292 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GYMC61_0031 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:gyc00460]
D GYMC61_3397 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GYMC61_0447 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GYMC61_3425 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GYMC61_2184 Acetamidase/Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:gyc00470]
D GYMC61_1091 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GYMC61_1476 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D GYMC61_1084 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYMC61_2961 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D GYMC61_1134 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D GYMC61_0848 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GYMC61_1891 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GYMC61_2763 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D GYMC61_3033 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GYMC61_0382 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:gyc00480]
D GYMC61_3397 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GYMC61_2338 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D GYMC61_3023 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GYMC61_0782 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GYMC61_0326 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GYMC61_0348 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GYMC61_2597 Peroxiredoxin K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D GYMC61_3461 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GYMC61_2546 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:gyc00511]
D GYMC61_0534 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:gyc00542]
D GYMC61_3260 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:gyc00541]
D GYMC61_3361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_3380 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYMC61_0537 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYMC61_3207 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYMC61_3214 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GYMC61_1642 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GYMC61_3344 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GYMC61_0834 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GYMC61_3528 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GYMC61_0043 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GYMC61_3221 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D GYMC61_3209 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D GYMC61_3256 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D GYMC61_3257 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D GYMC61_3253 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:gyc00550]
D GYMC61_3400 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYMC61_3441 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYMC61_1710 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYMC61_0693 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GYMC61_1891 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GYMC61_1888 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYMC61_1084 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYMC61_1085 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GYMC61_1027 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D GYMC61_2037 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GYMC61_1073 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYMC61_2226 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYMC61_1890 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYMC61_1080 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GYMC61_0511 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GYMC61_3462 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D GYMC61_1886 Peptidoglycan glycosyltransferase K08724 pbpB; penicillin-binding protein 2B
D GYMC61_1887 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D GYMC61_0183 penicillin-binding protein transpeptidase K21465 pbpA; penicillin-binding protein A
D GYMC61_0010 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_0371 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_0395 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_2421 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GYMC61_0712 glycosyl transferase family 51 K03693 pbp1b; penicillin-binding protein 1B
C 00552 Teichoic acid biosynthesis [PATH:gyc00552]
D GYMC61_1073 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYMC61_2226 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYMC61_3260 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D GYMC61_3243 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D GYMC61_3385 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D GYMC61_1083 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D GYMC61_1066 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:gyc00543]
D GYMC61_3260 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D GYMC61_1240 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF
D GYMC61_2190 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D GYMC61_0085 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:gyc00730]
D GYMC61_1249 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D GYMC61_2346 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D GYMC61_1418 UBA/THIF-type NAD/FAD binding protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D GYMC61_0916 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0953 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0720 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0721 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GYMC61_1415 glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D GYMC61_0251 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GYMC61_1417 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D GYMC61_1414 thiamine monophosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D GYMC61_2345 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D GYMC61_2347 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D GYMC61_1958 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GYMC61_0816 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D GYMC61_1960 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D GYMC61_0128 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GYMC61_1410 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:gyc00740]
D GYMC61_0387 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GYMC61_0385 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GYMC61_1545 Cof-like hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D GYMC61_0388 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GYMC61_0386 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GYMC61_2051 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D GYMC61_2492 nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D GYMC61_2345 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D GYMC61_0362 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:gyc00750]
D GYMC61_3514 phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D GYMC61_1454 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GYMC61_3040 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GYMC61_2573 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GYMC61_0011 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D GYMC61_0012 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:gyc00760]
D GYMC61_0917 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GYMC61_0919 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D GYMC61_0918 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D GYMC61_2627 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D GYMC61_0369 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GYMC61_2420 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GYMC61_3060 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D GYMC61_0995 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D GYMC61_0922 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D GYMC61_2230 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D GYMC61_2493 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D GYMC61_0724 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GYMC61_1631 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GYMC61_3600 isochorismatase hydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
C 00770 Pantothenate and CoA biosynthesis [PATH:gyc00770]
D GYMC61_0855 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GYMC61_1252 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GYMC61_0856 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GYMC61_0858 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GYMC61_2871 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GYMC61_0501 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D GYMC61_1405 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D GYMC61_1881 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D GYMC61_0502 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GYMC61_0063 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D GYMC61_1950 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D GYMC61_1872 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GYMC61_0789 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GYMC61_1089 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D GYMC61_0853 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GYMC61_2212 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D GYMC61_2213 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D GYMC61_2214 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D GYMC61_2211 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D GYMC61_0503 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:gyc00780]
D GYMC61_1606 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GYMC61_2074 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_2495 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1972 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_2203 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_0738 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1799 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_0764 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_3390 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GYMC61_1636 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GYMC61_2967 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GYMC61_3095 aminotransferase class-III K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GYMC61_3096 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D GYMC61_2409 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D GYMC61_0500 bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:gyc00785]
D GYMC61_0219 biotin/lipoate A/B protein ligase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D GYMC61_3051 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D GYMC61_3471 biotin/lipoate A/B protein ligase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1832 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GYMC61_3319 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GYMC61_1833 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GYMC61_3318 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GYMC61_3320 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1519 Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1834 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GYMC61_1796 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GYMC61_1797 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GYMC61_0265 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D GYMC61_2853 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D GYMC61_0266 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D GYMC61_2852 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D GYMC61_0267 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D GYMC61_0215 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D GYMC61_0216 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D GYMC61_0214 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GYMC61_3084 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:gyc00790]
D GYMC61_0466 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D GYMC61_0816 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D GYMC61_0070 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D GYMC61_0071 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GYMC61_0069 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D GYMC61_2588 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GYMC61_0880 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D GYMC61_0387 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GYMC61_0067 glutamine amidotransferase of anthranilate synthase K25575 pabA; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component II [EC:2.6.1.123]
D GYMC61_0066 Anthranilate synthase K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D GYMC61_0068 Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D GYMC61_1771 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GYMC61_2817 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D GYMC61_1772 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GYMC61_1770 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GYMC61_1773 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GYMC61_1581 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GYMC61_1102 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GYMC61_1586 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GYMC61_0750 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GYMC61_1584 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D GYMC61_1260 xanthine dehydrogenase accessory protein pucB K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D GYMC61_1563 molybdopterin-guanine dinucleotide biosynthesis protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:gyc00670]
D GYMC61_2588 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GYMC61_0247 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GYMC61_3425 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GYMC61_1138 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GYMC61_1139 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GYMC61_1953 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GYMC61_0214 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GYMC61_1523 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GYMC61_1524 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D GYMC61_2589 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GYMC61_2543 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D GYMC61_0188 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:gyc00860]
D GYMC61_0870 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D GYMC61_1356 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GYMC61_0875 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GYMC61_0874 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GYMC61_0872 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D GYMC61_2640 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D GYMC61_0873 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D GYMC61_1465 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D GYMC61_1445 Coproporphyrinogen dehydrogenase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D GYMC61_1010 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D GYMC61_1467 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D GYMC61_1466 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D GYMC61_3473 Chlorite dismutase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D GYMC61_1290 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D GYMC61_2603 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D GYMC61_1283 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D GYMC61_1289 cobalamin (vitamin B12) biosynthesis CbiX protein K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4]
D GYMC61_1573 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D GYMC61_1854 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GYMC61_1853 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D GYMC61_2615 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D GYMC61_2610 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D GYMC61_2616 precorrin-3B C17-methyltransferase K21479 cbiH60; cobalt-factor III methyltransferase [EC:2.1.1.272]
D GYMC61_2609 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D GYMC61_2608 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D GYMC61_2614 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D GYMC61_2612 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D GYMC61_2611 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D GYMC61_2613 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D GYMC61_2607 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D GYMC61_0425 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D GYMC61_2602 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D GYMC61_2606 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D GYMC61_0419 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D GYMC61_0421 cobalbumin biosynthesis protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D GYMC61_0424 conserved hypothetical protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D GYMC61_0422 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D GYMC61_2604 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D GYMC61_0423 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D GYMC61_0420 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:gyc00130]
D GYMC61_0469 2-heptaprenyl-1,4-naphthoquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D GYMC61_0567 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D GYMC61_0568 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D GYMC61_0569 alpha/beta hydrolase fold protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D GYMC61_1716 Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D GYMC61_0571 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D GYMC61_0570 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D GYMC61_2403 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D GYMC61_0566 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:gyc00900]
D GYMC61_0251 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GYMC61_2039 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D GYMC61_0082 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D GYMC61_0039 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D GYMC61_0083 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D GYMC61_0173 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D GYMC61_0162 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_0250 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GYMC61_0468 Trans-hexaprenyltranstransferase K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D GYMC61_0470 heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D GYMC61_2037 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:gyc00907]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_2443 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D GYMC61_3564 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D GYMC61_3087 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_0739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_2110 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D GYMC61_2122 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D GYMC61_0567 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:gyc00332]
D GYMC61_2872 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GYMC61_2873 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:gyc00261]
D GYMC61_1292 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D GYMC61_3293 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYMC61_2061 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYMC61_2060 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GYMC61_2062 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GYMC61_3111 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GYMC61_0495 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:gyc00521]
D GYMC61_0195 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D GYMC61_1388 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYMC61_1242 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D GYMC61_1841 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D GYMC61_0195 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:gyc00401]
D GYMC61_0483 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_0482 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D GYMC61_0476 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D GYMC61_1971 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GYMC61_2074 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_2495 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1972 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_2203 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_0738 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1799 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_0764 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1636 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GYMC61_1973 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:gyc00999]
D GYMC61_0659 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GYMC61_0993 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:gyc00362]
D GYMC61_3087 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_0739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_2110 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_2296 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D GYMC61_2298 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D GYMC61_2297 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D GYMC61_2295 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D GYMC61_3465 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D GYMC61_2300 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D GYMC61_2299 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D GYMC61_2253 monooxygenase FAD-binding protein K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24]
D GYMC61_2287 AMP-dependent synthetase and ligase K04116 aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
D GYMC61_3088 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D GYMC61_1327 acyl-CoA dehydrogenase domain protein K16173 acd; glutaryl-CoA dehydrogenase (non-decarboxylating) [EC:1.3.99.32]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_0829 Enoyl-CoA hydratase/isomerase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D GYMC61_3452 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2861 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2279 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2109 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:gyc00627]
D GYMC61_0412 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GYMC61_1288 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:gyc00625]
D GYMC61_0742 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D GYMC61_2307 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_1054 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GYMC61_2862 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:gyc00622]
D GYMC61_2295 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D GYMC61_3465 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D GYMC61_2300 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D GYMC61_2299 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D GYMC61_2298 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D GYMC61_2296 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D GYMC61_2297 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D GYMC61_3087 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_0739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D GYMC61_2110 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:gyc00643]
D GYMC61_0412 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D GYMC61_2771 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D GYMC61_2772 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D GYMC61_2773 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:gyc00930]
D GYMC61_1052 acyl-CoA dehydrogenase domain protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D GYMC61_2864 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:gyc00621]
D GYMC61_3465 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D GYMC61_2300 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D GYMC61_2299 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D GYMC61_2296 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D GYMC61_2298 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D GYMC61_2297 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:gyc00626]
D GYMC61_0742 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:gyc03020]
D GYMC61_0099 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYMC61_0100 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYMC61_0134 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYMC61_1949 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYMC61_3447 DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:gyc03010]
D GYMC61_0455 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D GYMC61_2033 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GYMC61_0113 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GYMC61_0715 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GYMC61_0124 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GYMC61_3546 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GYMC61_0103 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GYMC61_0121 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GYMC61_0141 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GYMC61_0106 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GYMC61_0133 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GYMC61_0102 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GYMC61_0132 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GYMC61_0120 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GYMC61_2052 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GYMC61_1979 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GYMC61_0116 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GYMC61_3544 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GYMC61_0111 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GYMC61_1005 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GYMC61_1020 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GYMC61_0095 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GYMC61_0110 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GYMC61_0107 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GYMC61_0108 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D GYMC61_0119 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GYMC61_0122 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GYMC61_0097 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GYMC61_3541 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GYMC61_0096 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GYMC61_0094 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GYMC61_0140 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GYMC61_0117 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GYMC61_0126 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GYMC61_0114 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GYMC61_0135 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GYMC61_0123 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GYMC61_1986 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GYMC61_0800 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GYMC61_0908 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GYMC61_0112 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GYMC61_0109 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D GYMC61_0118 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GYMC61_0045 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D GYMC61_0910 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GYMC61_1962 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GYMC61_0115 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GYMC61_0125 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GYMC61_3438 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GYMC61_1878 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GYMC61_0187 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYMC61_0091 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYMC61_3562 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GYMC61_0799 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GYMC61_0131 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GYMC61_0101 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D GYMC61_R0069 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0026 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0114 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0024 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0066 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0113 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0106 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0068 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0067 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0071 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:gyc00970]
D GYMC61_R0115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0104 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0082 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0097 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0109 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0117 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0062 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0111 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0094 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0038 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYMC61_R0029 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYMC61_R0054 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYMC61_R0090 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYMC61_R0043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYMC61_R0057 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYMC61_R0074 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYMC61_R0051 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GYMC61_R0049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYMC61_R0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYMC61_R0058 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYMC61_R0107 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYMC61_R0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0092 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0031 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0064 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0088 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0078 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0112 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0048 tRNA-His K14226 tRNA-His; tRNA His
D GYMC61_R0087 tRNA-His K14226 tRNA-His; tRNA His
D GYMC61_R0002 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYMC61_R0008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYMC61_R0089 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYMC61_R0099 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYMC61_R0052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0079 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0103 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0061 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0016 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYMC61_R0033 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYMC61_R0059 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYMC61_R0077 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYMC61_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0083 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0084 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0042 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0073 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0044 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYMC61_R0075 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYMC61_R0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0096 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0081 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0063 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0108 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0102 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0085 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0091 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0098 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0101 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0076 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0086 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GYMC61_R0046 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYMC61_R0100 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYMC61_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0041 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0072 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0093 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0105 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_0084 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYMC61_1154 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GYMC61_2186 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GYMC61_1155 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GYMC61_1153 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GYMC61_0962 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYMC61_2431 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYMC61_0945 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYMC61_0508 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYMC61_3494 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D GYMC61_0797 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYMC61_0013 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYMC61_0086 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYMC61_0031 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYMC61_1953 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GYMC61_0879 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYMC61_0666 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYMC61_1909 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYMC61_0075 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYMC61_3457 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GYMC61_2041 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYMC61_0944 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GYMC61_0810 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYMC61_0811 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GYMC61_0714 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GYMC61_1610 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:gyc03060]
D GYMC61_0127 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D GYMC61_0092 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D GYMC61_3127 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D GYMC61_0935 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D GYMC61_0931 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D GYMC61_2629 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_3560 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_3195 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYMC61_3262 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYMC61_1978 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYMC61_R0006 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D GYMC61_1976 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYMC61_2352 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GYMC61_1104 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GYMC61_1105 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D GYMC61_1987 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYMC61_1484 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYMC61_1910 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:gyc04122]
D GYMC61_0916 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0953 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0720 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_2395 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D GYMC61_2894 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GYMC61_1553 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GYMC61_0954 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GYMC61_1586 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GYMC61_1581 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GYMC61_1587 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D GYMC61_1102 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GYMC61_0750 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GYMC61_0721 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GYMC61_1416 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D GYMC61_1418 UBA/THIF-type NAD/FAD binding protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:gyc03018]
D GYMC61_3133 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYMC61_2053 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GYMC61_3125 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GYMC61_1087 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYMC61_0436 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GYMC61_3439 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GYMC61_2086 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GYMC61_2063 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYMC61_1827 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYMC61_0777 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYMC61_1013 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GYMC61_1110 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYMC61_2103 RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:gyc03030]
D GYMC61_2250 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYMC61_0773 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYMC61_2042 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYMC61_0016 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYMC61_0025 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYMC61_1004 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYMC61_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYMC61_3540 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GYMC61_1034 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GYMC61_3545 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_3289 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_2143 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GYMC61_1989 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GYMC61_0820 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D GYMC61_0787 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYMC61_1147 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GYMC61_2207 AAA ATPase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
C 03410 Base excision repair [PATH:gyc03410]
D GYMC61_0510 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GYMC61_3484 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GYMC61_1345 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GYMC61_0788 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GYMC61_1307 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GYMC61_0165 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GYMC61_0787 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYMC61_0937 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GYMC61_1147 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:gyc03420]
D GYMC61_0048 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GYMC61_3174 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D GYMC61_3175 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D GYMC61_0841 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D GYMC61_1146 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYMC61_0787 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYMC61_1147 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:gyc03430]
D GYMC61_2095 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GYMC61_0824 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D GYMC61_2096 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D GYMC61_1146 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYMC61_0248 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GYMC61_0249 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GYMC61_0937 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GYMC61_3545 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_3289 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_0773 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYMC61_2042 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYMC61_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYMC61_0016 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYMC61_1004 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYMC61_0025 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYMC61_2250 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYMC61_1147 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:gyc03440]
D GYMC61_0937 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GYMC61_3545 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_3289 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GYMC61_1031 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GYMC61_0018 recombination protein RecR K06187 recR; recombination protein RecR
D GYMC61_2081 RecA domain protein K03553 recA; recombination protein RecA
D GYMC61_2083 recA protein K03553 recA; recombination protein RecA
D GYMC61_0787 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYMC61_0926 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GYMC61_0927 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GYMC61_1967 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GYMC61_3526 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GYMC61_0956 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GYMC61_0773 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYMC61_2042 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYMC61_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYMC61_0016 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYMC61_1004 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYMC61_0025 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYMC61_2250 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYMC61_1951 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:gyc02010]
D GYMC61_0813 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GYMC61_1580 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D GYMC61_1534 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D GYMC61_1533 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein
D GYMC61_1532 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D GYMC61_1531 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D GYMC61_1176 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D GYMC61_1174 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D GYMC61_1175 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GYMC61_1424 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYMC61_1511 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D GYMC61_1512 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYMC61_1513 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYMC61_2716 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D GYMC61_2715 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D GYMC61_2714 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D GYMC61_0531 extracellular solute-binding protein family 1 K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D GYMC61_0532 binding-protein-dependent transport systems inner membrane component K10189 lacF; lactose/L-arabinose transport system permease protein
D GYMC61_0533 binding-protein-dependent transport systems inner membrane component K10190 lacG; lactose/L-arabinose transport system permease protein
D GYMC61_2709 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein
D GYMC61_2708 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein
D GYMC61_2707 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein
D GYMC61_2959 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D GYMC61_2958 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D GYMC61_2957 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D GYMC61_2068 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D GYMC61_2070 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D GYMC61_2071 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D GYMC61_2069 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D GYMC61_3304 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D GYMC61_3303 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D GYMC61_3302 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D GYMC61_3328 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D GYMC61_3329 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D GYMC61_3330 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GYMC61_3331 RbsD or FucU transport K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D GYMC61_2845 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D GYMC61_2847 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D GYMC61_2846 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D GYMC61_2848 ABC transporter related protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D GYMC61_0175 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYMC61_3503 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYMC61_0176 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D GYMC61_3504 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D GYMC61_0177 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D GYMC61_3505 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D GYMC61_0184 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYMC61_3517 extracellular solute-binding protein family 3 K10036 glnH; glutamine transport system substrate-binding protein
D GYMC61_3518 polar amino acid ABC transporter, inner membrane subunit K10037 glnP; glutamine transport system permease protein
D GYMC61_3519 ABC transporter related protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYMC61_2806 extracellular solute-binding protein family 3 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GYMC61_2808 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYMC61_2807 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYMC61_2805 ABC transporter related protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYMC61_2504 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_3057 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_2302 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_3105 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_2500 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3056 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_2303 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3104 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3103 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_3055 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2304 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2501 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2502 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3054 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2305 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3102 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3101 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3053 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2306 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2503 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3077 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D GYMC61_3078 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D GYMC61_3079 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein
D GYMC61_2778 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D GYMC61_2777 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D GYMC61_2776 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D GYMC61_2775 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D GYMC61_2774 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D GYMC61_1612 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D GYMC61_2742 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D GYMC61_1613 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D GYMC61_2746 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D GYMC61_1614 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D GYMC61_2745 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D GYMC61_1615 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D GYMC61_2744 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D GYMC61_1616 ABC transporter related protein K10823 oppF; oligopeptide transport system ATP-binding protein
D GYMC61_0580 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D GYMC61_0169 ABC-3 protein K09816 znuB; zinc transport system permease protein
D GYMC61_0168 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GYMC61_2619 Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D GYMC61_2620 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D GYMC61_2618 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D GYMC61_2617 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D GYMC61_3020 BioY protein K03523 bioY; biotin transport system substrate-specific component
D GYMC61_3097 BioY protein K03523 bioY; biotin transport system substrate-specific component
D GYMC61_0138 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D GYMC61_1413 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D GYMC61_0136 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYMC61_0137 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYMC61_0340 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein
D GYMC61_0341 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein
D GYMC61_1170 putative SpaE K20491 nisE; lantibiotic transport system permease protein
D GYMC61_1169 lantibiotic ABC transporter (permease) K20492 nisG; lantibiotic transport system permease protein
D GYMC61_1171 ABC transporter related protein K20490 nisF; lantibiotic transport system ATP-binding protein
D GYMC61_3188 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D GYMC61_3189 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GYMC61_2463 conserved hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D GYMC61_2462 ABC transporter related protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D GYMC61_2125 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYMC61_2126 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYMC61_2470 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYMC61_2471 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:gyc02060]
D GYMC61_1787 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GYMC61_1786 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D GYMC61_1785 PTS system, glucose-specific IIBC subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D GYMC61_3509 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYMC61_0407 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D GYMC61_3507 PTS system, sucrose-specific IIBC subunit K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYMC61_2812 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYMC61_3482 PTS system, beta-glucoside-specific IIABC subunit K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYMC61_2554 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D GYMC61_2795 Protein-N(pi)-phosphohistidine--sugar phosphotransferase K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D GYMC61_2235 PTS system, fructose subfamily, IIC subunit K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195]
D GYMC61_2669 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2137 PTS system, lactose-specific IIa component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2670 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2134 PTS system, lactose/cellobiose family IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2668 PTS system, cellobiose-specific IIC subunit K02761 celB; cellobiose PTS system EIIC component
D GYMC61_2135 PTS system, cellobiose-specific IIC subunit K02761 celB; cellobiose PTS system EIIC component
D GYMC61_2933 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GYMC61_2932 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYMC61_2931 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D GYMC61_2649 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYMC61_2650 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:gyc03070]
D GYMC61_0935 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D GYMC61_0092 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D GYMC61_3127 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D GYMC61_0127 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D GYMC61_0931 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D GYMC61_2629 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_3560 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_3195 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYMC61_3262 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYMC61_1976 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYMC61_1978 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYMC61_2352 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GYMC61_1104 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GYMC61_1105 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:gyc02020]
D GYMC61_0786 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_2329 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_1695 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_0785 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D GYMC61_0816 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D GYMC61_0175 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYMC61_3503 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYMC61_1216 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D GYMC61_3223 flagellin domain protein K02406 fliC; flagellin
D GYMC61_3233 flagellin domain protein K02406 fliC; flagellin
D GYMC61_2030 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D GYMC61_0987 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D GYMC61_2790 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D GYMC61_2791 putative tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D GYMC61_2792 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D GYMC61_0403 multi-sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D GYMC61_0402 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD
D GYMC61_1853 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D GYMC61_3537 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYMC61_3538 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR
D GYMC61_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GYMC61_0342 integral membrane sensor signal transduction histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D GYMC61_0343 two component transcriptional regulator, winged helix family K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
D GYMC61_0341 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein
D GYMC61_0340 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein
D GYMC61_2421 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GYMC61_0524 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D GYMC61_0523 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR
D GYMC61_1167 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D GYMC61_1166 two component transcriptional regulator, winged helix family K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GYMC61_1158 lantibiotic precursor K20482 nisA; lantibiotic bacteriocin
D GYMC61_1168 SpaI K20489 nisI; lantibiotic immunity protein
D GYMC61_1171 ABC transporter related protein K20490 nisF; lantibiotic transport system ATP-binding protein
D GYMC61_1170 putative SpaE K20491 nisE; lantibiotic transport system permease protein
D GYMC61_1169 lantibiotic ABC transporter (permease) K20492 nisG; lantibiotic transport system permease protein
D GYMC61_2643 integral membrane sensor signal transduction histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D GYMC61_2455 integral membrane sensor signal transduction histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D GYMC61_1736 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D GYMC61_3444 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D GYMC61_0911 stage 0 sporulation protein B (sporulation initiation phosphoprotein) K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D GYMC61_0256 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D GYMC61_1377 signal transduction histidine kinase regulating citrate/malate metabolism K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D GYMC61_1376 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR
D GYMC61_2371 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GYMC61_2232 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GYMC61_0409 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D GYMC61_2635 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_2636 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_2638 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_2637 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D GYMC61_3224 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D GYMC61_3241 Histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D GYMC61_3240 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU
D GYMC61_1315 integral membrane sensor signal transduction histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D GYMC61_1316 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR
D GYMC61_1312 conserved hypothetical protein K11619 liaI; lia operon protein LiaI
D GYMC61_1313 phage shock protein A, PspA K11620 liaH; lia operon protein LiaH
D GYMC61_1314 Cell wall-active antibiotics response protein K11622 liaF; lia operon protein LiaF
D GYMC61_2911 two component transcriptional regulator, LuxR family K07696 nreC; two-component system, NarL family, response regulator NreC
D GYMC61_2577 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D GYMC61_2117 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_2480 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_1379 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D GYMC61_3140 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D GYMC61_0891 type II secretory pathway pseudopilin PulG K02650 pilA; type IV pilus assembly protein PilA
D GYMC61_0472 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GYMC61_3428 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1248 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1795 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_2101 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1583 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1675 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_2027 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D GYMC61_0324 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D GYMC61_2026 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GYMC61_2016 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GYMC61_2129 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GYMC61_2025 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GYMC61_1579 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GYMC61_2809 integral membrane sensor signal transduction histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D GYMC61_2810 response regulator receiver protein K07719 glnL; two-component system, response regulator GlnL
D GYMC61_2961 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D GYMC61_2719 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D GYMC61_3305 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D GYMC61_2718 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D GYMC61_2158 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D GYMC61_2910 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GYMC61_0579 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GYMC61_2909 cytochrome bd-type ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GYMC61_0578 cytochrome bd-type quinol oxidase, subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GYMC61_1297 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D GYMC61_3230 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D GYMC61_0149 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:gyc02024]
D GYMC61_0583 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D GYMC61_2103 RNA chaperone Hfq K03666 hfq; host factor-I protein
D GYMC61_0476 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GYMC61_2318 conserved hypothetical protein K20266 trbJ; type IV secretion system protein TrbJ
D GYMC61_2504 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_3057 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_2302 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_3105 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_2500 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3056 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_2303 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3104 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3103 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_3055 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2304 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2501 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2502 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3054 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2305 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3102 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3101 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3053 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2306 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2503 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2682 beta-lactamase domain protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D GYMC61_1472 O-succinylbenzoate-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_1803 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_2975 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0734 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_1579 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GYMC61_0385 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GYMC61_2509 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D GYMC61_1612 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D GYMC61_2742 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D GYMC61_1613 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D GYMC61_2746 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D GYMC61_1614 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D GYMC61_2745 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D GYMC61_1615 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D GYMC61_2744 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D GYMC61_1616 ABC transporter related protein K10823 oppF; oligopeptide transport system ATP-binding protein
D GYMC61_1352 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYMC61_1353 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GYMC61_1354 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GYMC61_2743 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GYMC61_2629 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_3560 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_1482 ComK family protein K02250 comK; competence protein ComK
D GYMC61_0935 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D GYMC61_0092 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D GYMC61_3127 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D GYMC61_0127 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D GYMC61_0931 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D GYMC61_3195 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYMC61_3262 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYMC61_1976 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYMC61_1978 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYMC61_3240 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU
D GYMC61_3444 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D GYMC61_0911 stage 0 sporulation protein B (sporulation initiation phosphoprotein) K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D GYMC61_0256 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D GYMC61_0668 transcriptional regulator, XRE family K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D GYMC61_1158 lantibiotic precursor K20482 nisA; lantibiotic bacteriocin
D GYMC61_1167 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D GYMC61_1166 two component transcriptional regulator, winged helix family K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GYMC61_1168 SpaI K20489 nisI; lantibiotic immunity protein
D GYMC61_1171 ABC transporter related protein K20490 nisF; lantibiotic transport system ATP-binding protein
D GYMC61_1170 putative SpaE K20491 nisE; lantibiotic transport system permease protein
D GYMC61_1169 lantibiotic ABC transporter (permease) K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:gyc02030]
D GYMC61_3428 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1248 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1795 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_2101 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1583 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1675 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_3328 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D GYMC61_2026 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GYMC61_2027 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D GYMC61_0324 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D GYMC61_2016 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GYMC61_2129 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GYMC61_2028 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D GYMC61_2025 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GYMC61_2029 CheD, stimulates methylation of MCP protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D GYMC61_0472 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GYMC61_2004 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GYMC61_2014 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GYMC61_2015 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D GYMC61_0987 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D GYMC61_0986 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:gyc02040]
D GYMC61_2002 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GYMC61_2003 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GYMC61_2004 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GYMC61_2005 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D GYMC61_2006 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GYMC61_2007 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D GYMC61_2009 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D GYMC61_2013 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D GYMC61_2014 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GYMC61_2015 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D GYMC61_2017 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GYMC61_2018 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GYMC61_2019 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GYMC61_2020 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GYMC61_2022 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GYMC61_2021 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GYMC61_2000 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GYMC61_2001 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GYMC61_2010 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D GYMC61_2011 fagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D GYMC61_3393 fagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D GYMC61_3392 fagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D GYMC61_3228 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GYMC61_3227 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D GYMC61_3223 flagellin domain protein K02406 fliC; flagellin
D GYMC61_3233 flagellin domain protein K02406 fliC; flagellin
D GYMC61_3201 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D GYMC61_3200 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D GYMC61_3234 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D GYMC61_3199 flagellar protein K02423 fliT; flagellar protein FliT
D GYMC61_0987 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D GYMC61_0986 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D GYMC61_3230 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D GYMC61_0157 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D GYMC61_3140 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D GYMC61_2030 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GYMC61_3133 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:gyc04980]
D GYMC61_0425 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D GYMC61_0280 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D GYMC61_0278 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D GYMC61_0279 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D GYMC61_1523 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:gyc01501]
D GYMC61_1612 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D GYMC61_2742 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D GYMC61_1613 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D GYMC61_2746 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D GYMC61_1614 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D GYMC61_2745 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D GYMC61_1615 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D GYMC61_2744 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D GYMC61_1616 ABC transporter related protein K10823 oppF; oligopeptide transport system ATP-binding protein
D GYMC61_0511 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GYMC61_0712 glycosyl transferase family 51 K03693 pbp1b; penicillin-binding protein 1B
C 01502 Vancomycin resistance [PATH:gyc01502]
D GYMC61_1084 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYMC61_1091 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GYMC61_1085 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GYMC61_1890 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYMC61_1080 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GYMC61_2421 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:gyc01503]
D GYMC61_0143 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_0645 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_1064 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_3244 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_3345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_1216 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:gyc01000]
C 01001 Protein kinases [BR:gyc01001]
D GYMC61_1957 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D GYMC61_3487 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D GYMC61_2468 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D GYMC61_0059 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D GYMC61_2518 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D GYMC61_0786 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_2329 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_1695 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_0403 multi-sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D GYMC61_3537 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYMC61_0342 integral membrane sensor signal transduction histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D GYMC61_0524 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D GYMC61_1167 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D GYMC61_3241 Histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D GYMC61_1315 integral membrane sensor signal transduction histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D GYMC61_2643 integral membrane sensor signal transduction histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D GYMC61_2455 integral membrane sensor signal transduction histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D GYMC61_1736 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D GYMC61_1377 signal transduction histidine kinase regulating citrate/malate metabolism K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D GYMC61_2789 signal transduction histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D GYMC61_0409 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D GYMC61_2026 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GYMC61_2809 integral membrane sensor signal transduction histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D GYMC61_2719 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:gyc01009]
D GYMC61_0777 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYMC61_1956 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:gyc01002]
D GYMC61_1910 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GYMC61_1006 spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D GYMC61_1899 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D GYMC61_2740 Pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D GYMC61_2568 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D GYMC61_1116 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GYMC61_2097 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D GYMC61_3286 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D GYMC61_1279 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC
D GYMC61_1136 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GYMC61_2224 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D GYMC61_0155 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GYMC61_1694 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GYMC61_1505 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GYMC61_2231 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D GYMC61_2842 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D GYMC61_3291 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D GYMC61_3372 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D GYMC61_1108 Abortive infection protein K07052 K07052; CAAX protease family protein
D GYMC61_0437 Abortive infection protein K07052 K07052; CAAX protease family protein
D GYMC61_1623 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D GYMC61_2626 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D GYMC61_0670 Thermolysin K01400 nprE; bacillolysin [EC:3.4.24.28]
D GYMC61_2642 M6 family metalloprotease domain protein K09607 ina; immune inhibitor A [EC:3.4.24.-]
D GYMC61_0196 peptidase M14 carboxypeptidase A K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D GYMC61_2421 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GYMC61_3591 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D GYMC61_3023 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GYMC61_2089 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D GYMC61_0677 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GYMC61_2574 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D GYMC61_0323 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D GYMC61_1714 amidohydrolase K14665 amhX; amidohydrolase [EC:3.5.1.-]
D GYMC61_1824 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D GYMC61_3341 amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D GYMC61_3052 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D GYMC61_0129 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GYMC61_2644 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GYMC61_0766 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D GYMC61_0232 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GYMC61_2984 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D GYMC61_2383 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D GYMC61_2590 conserved hypothetical protein K20109 zmp1; Pro-Pro endopeptidase [EC:3.4.24.89]
D GYMC61_0062 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GYMC61_0907 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D GYMC61_2040 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GYMC61_2747 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D GYMC61_0448 conserved hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D GYMC61_1200 peptidase S58 DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D GYMC61_1216 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D GYMC61_1065 peptidase S8 and S53 subtilisin kexin sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-]
D GYMC61_0010 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_0371 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_0395 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_3143 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GYMC61_0867 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GYMC61_0866 ATP-dependent protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D GYMC61_1875 PDZ/DHR/GLGF domain protein K07177 K07177; Lon-like protease
D GYMC61_0593 transcriptional regulator, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYMC61_2118 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYMC61_1987 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYMC61_1484 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYMC61_3181 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GYMC61_3264 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GYMC61_0725 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D GYMC61_0191 Rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D GYMC61_0255 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D GYMC61_1997 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D GYMC61_3397 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GYMC61_0968 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D GYMC61_0969 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:gyc01003]
D GYMC61_1083 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D GYMC61_0561 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D GYMC61_0511 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GYMC61_0712 glycosyl transferase family 51 K03693 pbp1b; penicillin-binding protein 1B
D GYMC61_3462 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D GYMC61_1240 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF
D GYMC61_3260 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D GYMC61_2190 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:gyc01005]
D GYMC61_2876 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D GYMC61_3180 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D GYMC61_2344 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D GYMC61_3260 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:gyc01011]
D GYMC61_3400 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYMC61_3441 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYMC61_1710 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYMC61_0693 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GYMC61_1891 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GYMC61_1888 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYMC61_1084 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYMC61_1091 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GYMC61_0848 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GYMC61_1890 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYMC61_1080 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GYMC61_1073 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYMC61_2226 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYMC61_0511 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GYMC61_0712 glycosyl transferase family 51 K03693 pbp1b; penicillin-binding protein 1B
D GYMC61_3462 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D GYMC61_1886 Peptidoglycan glycosyltransferase K08724 pbpB; penicillin-binding protein 2B
D GYMC61_1887 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D GYMC61_0183 penicillin-binding protein transpeptidase K21465 pbpA; penicillin-binding protein A
D GYMC61_0973 penicillin-binding protein transpeptidase K21468 pbpI; penicillin-binding protein 4B
D GYMC61_0010 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_0371 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_0395 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYMC61_3372 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D GYMC61_2421 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GYMC61_2097 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D GYMC61_3286 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D GYMC61_3052 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D GYMC61_3591 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D GYMC61_2842 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D GYMC61_3291 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D GYMC61_0966 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D GYMC61_0449 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D GYMC61_3399 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D GYMC61_3247 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D GYMC61_0143 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_0645 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_1064 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_3244 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_3345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:gyc01004]
D GYMC61_1971 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GYMC61_1605 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GYMC61_1606 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GYMC61_2074 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_2495 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1972 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_2203 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_0738 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_1799 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_0764 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYMC61_3390 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GYMC61_1636 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GYMC61_2858 2-nitropropane dioxygenase NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D GYMC61_1347 short-chain dehydrogenase/reductase SDR K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D GYMC61_0711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0723 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_0757 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GYMC61_2277 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D GYMC61_1472 O-succinylbenzoate-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_1803 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_2975 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0734 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_2440 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D GYMC61_2341 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D GYMC61_2283 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D GYMC61_1970 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GYMC61_2579 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYMC61_0454 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:gyc01008]
D GYMC61_2390 chalcone and stilbene synthase domain protein K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D GYMC61_2391 Isoprenylcysteine carboxyl methyltransferase K16168 bpsB; methyltransferase
C 01006 Prenyltransferases [BR:gyc01006]
D GYMC61_0250 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GYMC61_0468 Trans-hexaprenyltranstransferase K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D GYMC61_0470 heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D GYMC61_2037 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GYMC61_2102 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GYMC61_0566 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D GYMC61_1854 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:gyc01007]
D GYMC61_0084 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYMC61_0714 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GYMC61_1610 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GYMC61_0086 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYMC61_3457 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GYMC61_0031 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYMC61_1909 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYMC61_0879 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYMC61_0666 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYMC61_0075 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYMC61_0945 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYMC61_0508 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYMC61_0944 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GYMC61_3494 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D GYMC61_0013 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYMC61_2041 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYMC61_0797 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYMC61_0962 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYMC61_2431 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYMC61_0810 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYMC61_0811 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GYMC61_0507 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D GYMC61_1744 aminotransferase class I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D GYMC61_1251 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GYMC61_2592 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GYMC61_1809 aminotransferase class I and II K00841 patA; aminotransferase [EC:2.6.1.-]
D GYMC61_3007 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D GYMC61_0482 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GYMC61_2967 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GYMC61_3010 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GYMC61_1044 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D GYMC61_1596 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GYMC61_2755 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D GYMC61_2754 Acetylornithine transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D GYMC61_3095 aminotransferase class-III K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GYMC61_2218 aminotransferase class-III K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D GYMC61_1356 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GYMC61_0875 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GYMC61_1476 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D GYMC61_0853 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GYMC61_1454 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:gyc00194]
D GYMC61_3414 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GYMC61_3415 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GYMC61_3416 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GYMC61_3417 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GYMC61_3418 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GYMC61_3419 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GYMC61_3420 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GYMC61_3421 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GYMC61_3422 ATP synthase I K02116 atpI; ATP synthase protein I
D GYMC61_3423 conserved hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:gyc03000]
D GYMC61_3572 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYMC61_2223 transcriptional regulator, LysR family K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D GYMC61_3114 transcriptional regulator, LysR family K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD
D GYMC61_2199 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D GYMC61_1679 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D GYMC61_2651 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D GYMC61_3395 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D GYMC61_1032 CBS domain containing protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D GYMC61_0539 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYMC61_0698 global transcriptional regulator, catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYMC61_3333 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYMC61_3367 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYMC61_1725 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYMC61_2782 transcriptional regulator, LacI family K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D GYMC61_2952 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D GYMC61_2737 transcriptional regulator, GntR family with LacI sensor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D GYMC61_2552 transcriptional regulator, GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D GYMC61_2666 transcriptional regulator, GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D GYMC61_0406 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYMC61_2067 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D GYMC61_1275 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D GYMC61_0774 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D GYMC61_2461 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D GYMC61_1211 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D GYMC61_0828 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D GYMC61_2438 transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D GYMC61_2748 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D GYMC61_0846 transcriptional regulator, LuxR family K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
D GYMC61_1457 transcriptional regulator, MarR family K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr
D GYMC61_1750 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D GYMC61_0847 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D GYMC61_2446 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D GYMC61_2116 transcriptional regulator, MerR family K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D GYMC61_3184 transcriptional regulator, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D GYMC61_1320 transcriptional regulator, MerR family K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D GYMC61_2555 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D GYMC61_2671 transcriptional regulator, MerR family K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
D GYMC61_1256 transcriptional regulator, MerR family K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D GYMC61_0365 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GYMC61_0170 ferric uptake regulator, Fur family K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D GYMC61_1364 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D GYMC61_2258 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D GYMC61_2294 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GYMC61_2308 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GYMC61_2309 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GYMC61_2335 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GYMC61_2373 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GYMC61_2285 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D GYMC61_1579 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D GYMC61_2545 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D GYMC61_0952 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D GYMC61_3326 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GYMC61_1547 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D GYMC61_2197 transcriptional regulator, ArsR family K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D GYMC61_2973 transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D GYMC61_2176 transcriptional regulator, XRE family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D GYMC61_0227 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D GYMC61_0500 bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GYMC61_3598 proprionate catabolism activator, Fis family K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D GYMC61_0668 transcriptional regulator, XRE family K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D GYMC61_0040 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D GYMC61_1516 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D GYMC61_3581 PAS modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D GYMC61_1041 PAS modulated sigma54 specific transcriptional regulator, Fis family K06714 rocR; arginine utilization regulatory protein
D GYMC61_1103 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D GYMC61_1999 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D GYMC61_1037 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator
D GYMC61_0647 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator
D GYMC61_1092 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D GYMC61_3480 transcriptional antiterminator, BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
D GYMC61_3508 transcriptional antiterminator, BglG K26932 sacT; sacPA operon transcriptional antiterminator
D GYMC61_1784 transcriptional antiterminator, BglG K03480 glcT; transcriptional antiterminator
D GYMC61_2796 PTS modulated transcriptional regulator, MtlR family K03483 mtlR; mannitol operon transcriptional activator
D GYMC61_2934 PTS modulated transcriptional regulator, MtlR family K03483 mtlR; mannitol operon transcriptional activator
D GYMC61_1688 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D GYMC61_2216 transcriptional regulator, PucR family K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D GYMC61_0030 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D GYMC61_0049 transcriptional regulator, AbrB family K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D GYMC61_3552 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYMC61_3554 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYMC61_0526 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator
D GYMC61_0253 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D GYMC61_1011 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D GYMC61_1410 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D GYMC61_1414 thiamine monophosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D GYMC61_0076 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D GYMC61_2859 transcriptional regulator, PaaX family K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D GYMC61_2835 transcriptional regulator, PaaX family K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D GYMC61_3138 transcriptional regulator, DeoR family K05311 cggR; central glycolytic genes regulator
D GYMC61_0467 tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D GYMC61_1912 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYMC61_3470 transcription factor, RsfA family K06314 rsfA; prespore-specific regulator
D GYMC61_0947 transcription factor, RsfA family K06314 rsfA; prespore-specific regulator
D GYMC61_0793 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D GYMC61_1264 HutP family protein K09683 hutP; hut operon positive regulatory protein
D GYMC61_1482 ComK family protein K02250 comK; competence protein ComK
C 03021 Transcription machinery [BR:gyc03021]
D GYMC61_0134 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYMC61_0099 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYMC61_0100 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYMC61_3447 DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D GYMC61_1949 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYMC61_0157 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D GYMC61_0150 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GYMC61_0428 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GYMC61_1575 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GYMC61_3488 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K03090 sigB; RNA polymerase sigma-B factor
D GYMC61_0982 RNA polymerase, sigma 28 subunit, SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D GYMC61_0374 RNA polymerase, sigma 28 subunit, SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D GYMC61_1900 RNA polymerase, sigma 28 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D GYMC61_1901 RNA polymerase, sigma 28 subunit, SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D GYMC61_0090 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
D GYMC61_3140 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D GYMC61_2030 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D GYMC61_2044 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D GYMC61_0246 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D GYMC61_0093 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D GYMC61_2467 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D GYMC61_3489 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D GYMC61_1246 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D GYMC61_1245 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D GYMC61_3486 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D GYMC61_3487 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D GYMC61_2468 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D GYMC61_0972 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GYMC61_3439 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:gyc03019]
D GYMC61_1974 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYMC61_2063 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYMC61_1827 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYMC61_2086 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GYMC61_3125 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GYMC61_1452 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D GYMC61_1087 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYMC61_0164 DEAD/DEAH box helicase domain protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D GYMC61_0436 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GYMC61_3133 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYMC61_2053 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GYMC61_3439 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GYMC61_0777 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYMC61_1013 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GYMC61_1110 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYMC61_2103 RNA chaperone Hfq K03666 hfq; host factor-I protein
D GYMC61_3224 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D GYMC61_2622 regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D GYMC61_3147 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:gyc03011]
D GYMC61_0455 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D GYMC61_2033 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GYMC61_0113 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GYMC61_0715 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GYMC61_0124 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GYMC61_3546 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GYMC61_0103 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GYMC61_0121 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GYMC61_0141 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GYMC61_0106 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GYMC61_0133 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GYMC61_0102 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GYMC61_0132 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GYMC61_0120 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GYMC61_2052 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GYMC61_1979 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GYMC61_0116 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GYMC61_3544 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GYMC61_0111 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GYMC61_1005 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GYMC61_1020 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GYMC61_0095 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GYMC61_0110 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GYMC61_0107 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GYMC61_0108 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D GYMC61_0119 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GYMC61_0122 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GYMC61_3541 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GYMC61_0096 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GYMC61_0094 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GYMC61_0097 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GYMC61_0140 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GYMC61_0117 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GYMC61_0126 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GYMC61_0114 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GYMC61_0135 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GYMC61_0123 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GYMC61_1986 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GYMC61_0800 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GYMC61_0908 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GYMC61_0112 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GYMC61_0109 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D GYMC61_0118 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GYMC61_0910 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GYMC61_1962 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GYMC61_0115 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GYMC61_0125 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GYMC61_3438 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GYMC61_1878 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GYMC61_0187 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYMC61_0091 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYMC61_3562 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GYMC61_0799 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GYMC61_0131 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GYMC61_0045 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D GYMC61_0101 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D GYMC61_R0106 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0068 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0067 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0071 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0069 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0026 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0114 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0024 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0066 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0113 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:gyc03009]
D GYMC61_1974 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYMC61_1029 GTP-binding protein Era K03595 era; GTPase
D GYMC61_0912 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D GYMC61_2044 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D GYMC61_0246 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D GYMC61_0093 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D GYMC61_0675 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D GYMC61_0035 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D GYMC61_1954 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GYMC61_0098 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D GYMC61_1871 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GYMC61_1016 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D GYMC61_3555 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GYMC61_1884 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GYMC61_0029 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GYMC61_0252 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D GYMC61_0088 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GYMC61_3531 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GYMC61_1409 protein of unknown function Met10 K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D GYMC61_1955 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GYMC61_1225 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GYMC61_1235 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GYMC61_0398 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GYMC61_1383 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYMC61_1632 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYMC61_1911 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYMC61_1099 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GYMC61_1931 GCN5-related N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GYMC61_1984 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D GYMC61_1015 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D GYMC61_0964 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GYMC61_0087 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D GYMC61_1087 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYMC61_0164 DEAD/DEAH box helicase domain protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D GYMC61_1958 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GYMC61_0460 ribosome-associated GTPase EngA K03977 engA; GTPase
D GYMC61_1988 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D GYMC61_2114 GTP-binding proten HflX K03665 hflX; GTPase
D GYMC61_0992 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D GYMC61_3432 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GYMC61_0939 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GYMC61_2049 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D GYMC61_2043 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D GYMC61_0003 S4 domain protein YaaA K14761 rlbA; ribosome-associated protein
D GYMC61_0997 iojap-like protein K09710 ybeB; ribosome-associated protein
D GYMC61_1026 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D GYMC61_0994 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein
D GYMC61_3197 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D GYMC61_3547 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D GYMC61_1877 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:gyc03016]
D GYMC61_0349 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D GYMC61_0499 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D GYMC61_2041 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYMC61_1909 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYMC61_0666 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYMC61_0031 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYMC61_3457 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GYMC61_0075 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYMC61_0945 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYMC61_0962 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYMC61_2431 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYMC61_0508 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYMC61_3494 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D GYMC61_0797 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYMC61_0013 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYMC61_0086 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYMC61_0879 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYMC61_0944 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GYMC61_0810 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYMC61_0811 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GYMC61_0714 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GYMC61_1610 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GYMC61_0940 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D GYMC61_1461 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYMC61_0684 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D GYMC61_1550 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D GYMC61_0139 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GYMC61_2050 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GYMC61_0916 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0953 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0720 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_3432 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GYMC61_2102 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GYMC61_3557 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GYMC61_3556 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GYMC61_3561 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GYMC61_0850 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D GYMC61_0679 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D GYMC61_0084 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYMC61_0015 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D GYMC61_0074 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D GYMC61_2092 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D GYMC61_1017 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D GYMC61_1308 RNA methyltransferase, TrmA family K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D GYMC61_1985 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GYMC61_3524 tRNA/rRNA methyltransferase (SpoU) K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D GYMC61_0160 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D GYMC61_1370 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D GYMC61_0808 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D GYMC61_0954 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GYMC61_2894 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GYMC61_1553 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GYMC61_3032 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D GYMC61_0929 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D GYMC61_1770 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GYMC61_1771 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GYMC61_1772 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GYMC61_1773 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GYMC61_1368 iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D GYMC61_0930 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D GYMC61_0721 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GYMC61_0060 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D GYMC61_1098 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D GYMC61_1100 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GYMC61_1097 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GYMC61_0946 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D GYMC61_1876 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D GYMC61_3125 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GYMC61_2053 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:gyc03012]
D GYMC61_2047 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GYMC61_0798 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GYMC61_1101 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GYMC61_2034 translation elongation factor Ts K02357 tsf; elongation factor Ts
D GYMC61_0105 translation elongation factor Tu K02358 tuf; elongation factor Tu
D GYMC61_0104 translation elongation factor G K02355 fusA; elongation factor G
D GYMC61_3435 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GYMC61_2036 ribosome recycling factor K02838 frr; ribosome recycling factor
D GYMC61_3434 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GYMC61_0046 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GYMC61_0130 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D GYMC61_0233 translation elongation factor P K02356 efp; elongation factor P
D GYMC61_3194 hypothetical protein K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:gyc03110]
D GYMC61_1601 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D GYMC61_0079 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D GYMC61_1763 ATPase AAA-2 domain protein K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D GYMC61_0865 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GYMC61_1998 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D GYMC61_1013 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GYMC61_1110 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYMC61_1014 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GYMC61_0064 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D GYMC61_1012 GrpE protein K03687 GRPE; molecular chaperone GrpE
D GYMC61_1128 small heat shock protein K13993 HSP20; HSP20 family protein
D GYMC61_0540 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D GYMC61_0521 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D GYMC61_1109 chaperonin Cpn10 K04078 groES; chaperonin GroES
D GYMC61_1216 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D GYMC61_0062 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GYMC61_3421 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GYMC61_0384 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D GYMC61_1460 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D GYMC61_0832 thioredoxin K03671 TXN; thioredoxin
D GYMC61_2899 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
D GYMC61_2397 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:gyc04131]
D GYMC61_0471 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GYMC61_1223 band 7 protein K07192 FLOT; flotillin
D GYMC61_3137 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYMC61_3098 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYMC61_0778 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:gyc03032]
D GYMC61_2143 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GYMC61_2207 AAA ATPase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D GYMC61_3572 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYMC61_0465 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYMC61_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GYMC61_3540 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GYMC61_0607 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D GYMC61_1034 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GYMC61_0794 replication initiation and membrane attachment family protein K03346 dnaB; replication initiation and membrane attachment protein
D GYMC61_0795 Primosomal DnaI domain protein K11144 dnaI; primosomal protein DnaI
D GYMC61_3545 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_3289 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_0773 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYMC61_2042 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYMC61_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYMC61_1004 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYMC61_0025 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYMC61_2250 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYMC61_0016 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYMC61_1989 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GYMC61_0820 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D GYMC61_0787 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYMC61_1147 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GYMC61_0006 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GYMC61_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GYMC61_2557 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GYMC61_2558 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GYMC61_1995 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GYMC61_2624 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D GYMC61_2520 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:gyc03036]
D GYMC61_3572 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYMC61_1974 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYMC61_1223 band 7 protein K07192 FLOT; flotillin
D GYMC61_0465 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYMC61_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GYMC61_0585 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D GYMC61_2103 RNA chaperone Hfq K03666 hfq; host factor-I protein
D GYMC61_1975 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D GYMC61_0391 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D GYMC61_0392 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D GYMC61_1897 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GYMC61_0055 Septum formation initiator K13052 divIC; cell division protein DivIC
D GYMC61_3189 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GYMC61_2066 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GYMC61_0692 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GYMC61_0650 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GYMC61_1885 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D GYMC61_1893 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D GYMC61_1851 cell cycle protein K03588 ftsW; cell division protein FtsW
D GYMC61_1892 stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D GYMC61_3188 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D GYMC61_1898 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYMC61_0821 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D GYMC61_0143 N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_0645 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_1064 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_3244 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_3345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYMC61_0719 Septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D GYMC61_0903 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D GYMC61_0904 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D GYMC61_1908 DivIVA domain protein K04074 divIVA; cell division initiation protein
D GYMC61_1905 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF
D GYMC61_3394 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_0900 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_1278 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_0901 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D GYMC61_0902 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D GYMC61_1634 cell cycle protein K05837 rodA; rod shape determining protein RodA
D GYMC61_3553 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D GYMC61_3570 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D GYMC61_3552 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYMC61_3554 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYMC61_2557 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GYMC61_2558 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GYMC61_3556 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GYMC61_3555 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GYMC61_1996 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D GYMC61_0367 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D GYMC61_3178 transcriptional regulator, MerR family K11686 racA; chromosome-anchoring protein RacA
D GYMC61_0051 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D GYMC61_0144 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GYMC61_1541 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D GYMC61_0868 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D GYMC61_3145 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:gyc03400]
D GYMC61_1737 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GYMC61_3484 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GYMC61_1345 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GYMC61_0510 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GYMC61_3148 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GYMC61_1237 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GYMC61_0415 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GYMC61_0588 nucleoside triphosphatase YtkD K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GYMC61_1307 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D GYMC61_0788 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GYMC61_0165 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D GYMC61_0937 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GYMC61_1147 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GYMC61_0787 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYMC61_3174 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D GYMC61_3175 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D GYMC61_0841 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D GYMC61_1146 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYMC61_0099 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYMC61_0100 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYMC61_0134 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYMC61_3447 DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D GYMC61_1949 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYMC61_0048 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GYMC61_2095 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GYMC61_0824 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D GYMC61_2096 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D GYMC61_0248 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GYMC61_0249 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GYMC61_0773 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYMC61_2042 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYMC61_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYMC61_1004 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYMC61_0025 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYMC61_2250 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYMC61_0016 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYMC61_3545 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_3289 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_3575 DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D GYMC61_0956 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GYMC61_2081 RecA domain protein K03553 recA; recombination protein RecA
D GYMC61_2083 recA protein K03553 recA; recombination protein RecA
D GYMC61_0926 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GYMC61_0927 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GYMC61_1951 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GYMC61_1488 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D GYMC61_1487 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D GYMC61_0080 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D GYMC61_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GYMC61_1967 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GYMC61_3526 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GYMC61_1031 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GYMC61_0018 recombination protein RecR K06187 recR; recombination protein RecR
D GYMC61_0254 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GYMC61_0512 recombination protein U K03700 recU; recombination protein U
D GYMC61_1486 recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D GYMC61_1485 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D GYMC61_1188 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D GYMC61_0006 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GYMC61_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GYMC61_1995 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GYMC61_0465 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYMC61_0604 RecT protein K07455 recT; recombination protein RecT
D GYMC61_0436 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GYMC61_2528 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GYMC61_0593 transcriptional regulator, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYMC61_2118 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYMC61_1334 regulatory protein RecX K03565 recX; regulatory protein
D GYMC61_0823 PHP domain protein K02347 polX; DNA polymerase (family X)
D GYMC61_2382 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GYMC61_0504 DnaQ family exonuclease/DinG family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GYMC61_1699 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GYMC61_0745 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYMC61_1700 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYMC61_0770 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:gyc03029]
D GYMC61_2047 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GYMC61_0798 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GYMC61_2034 translation elongation factor Ts K02357 tsf; elongation factor Ts
D GYMC61_0105 translation elongation factor Tu K02358 tuf; elongation factor Tu
D GYMC61_0104 translation elongation factor G K02355 fusA; elongation factor G
D GYMC61_1310 beta-lactamase domain protein K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-]
D GYMC61_2193 beta-lactamase domain protein K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-]
D GYMC61_1029 GTP-binding protein Era K03595 era; GTPase
D GYMC61_0714 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GYMC61_0666 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYMC61_0945 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYMC61_3494 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D GYMC61_3457 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GYMC61_1154 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GYMC61_2186 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GYMC61_1155 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GYMC61_1153 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GYMC61_3545 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_3289 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D GYMC61_1013 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GYMC61_1012 GrpE protein K03687 GRPE; molecular chaperone GrpE
D GYMC61_1110 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYMC61_1109 chaperonin Cpn10 K04078 groES; chaperonin GroES
D GYMC61_1014 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GYMC61_0916 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0953 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0720 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0144 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GYMC61_1854 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GYMC61_1853 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D GYMC61_2629 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_3560 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_1479 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D GYMC61_2583 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:gyc02000]
D GYMC61_2125 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYMC61_2126 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYMC61_2470 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYMC61_2471 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYMC61_1437 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D GYMC61_0813 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GYMC61_1580 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D GYMC61_1534 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D GYMC61_1533 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein
D GYMC61_1532 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D GYMC61_1531 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D GYMC61_1176 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D GYMC61_1174 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D GYMC61_1175 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GYMC61_0589 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D GYMC61_0590 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D GYMC61_1424 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYMC61_1511 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D GYMC61_1512 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYMC61_1513 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYMC61_2716 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D GYMC61_2715 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D GYMC61_2714 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D GYMC61_3304 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D GYMC61_3303 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D GYMC61_3302 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D GYMC61_2959 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D GYMC61_2958 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D GYMC61_2957 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D GYMC61_0531 extracellular solute-binding protein family 1 K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D GYMC61_0532 binding-protein-dependent transport systems inner membrane component K10189 lacF; lactose/L-arabinose transport system permease protein
D GYMC61_0533 binding-protein-dependent transport systems inner membrane component K10190 lacG; lactose/L-arabinose transport system permease protein
D GYMC61_2709 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein
D GYMC61_2708 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein
D GYMC61_2707 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein
D GYMC61_3328 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D GYMC61_3329 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D GYMC61_3330 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GYMC61_2845 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D GYMC61_2847 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D GYMC61_2846 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D GYMC61_2848 ABC transporter related protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D GYMC61_2731 extracellular solute-binding protein family 1 K25062 abnE; arabinooligosaccharide transport system substrate-binding protein
D GYMC61_2730 binding-protein-dependent transport systems inner membrane component K25063 abnF; arabinooligosaccharide transport system permease protein
D GYMC61_2729 binding-protein-dependent transport systems inner membrane component K25064 abnJ; arabinooligosaccharide transport system permease protein
D GYMC61_2068 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D GYMC61_2070 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D GYMC61_2071 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D GYMC61_2069 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D GYMC61_3366 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D GYMC61_1727 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D GYMC61_3365 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D GYMC61_1728 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D GYMC61_3364 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D GYMC61_1729 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D GYMC61_1740 periplasmic binding protein/LacI transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D GYMC61_1738 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D GYMC61_1739 ABC transporter related protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYMC61_0175 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYMC61_3503 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYMC61_0176 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D GYMC61_3504 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D GYMC61_0177 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D GYMC61_3505 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D GYMC61_0184 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYMC61_3517 extracellular solute-binding protein family 3 K10036 glnH; glutamine transport system substrate-binding protein
D GYMC61_3518 polar amino acid ABC transporter, inner membrane subunit K10037 glnP; glutamine transport system permease protein
D GYMC61_3519 ABC transporter related protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYMC61_2806 extracellular solute-binding protein family 3 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GYMC61_2808 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYMC61_2807 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYMC61_2805 ABC transporter related protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYMC61_2504 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_3057 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_2302 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_3105 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYMC61_2500 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3056 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_2303 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3104 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D GYMC61_3103 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_3055 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2304 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2501 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D GYMC61_2502 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3054 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2305 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3102 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3101 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3053 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2306 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_2503 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYMC61_3077 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D GYMC61_3078 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D GYMC61_3079 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein
D GYMC61_2778 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D GYMC61_2777 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D GYMC61_2776 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D GYMC61_2775 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D GYMC61_2774 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D GYMC61_1473 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D GYMC61_2856 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D GYMC61_1474 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D GYMC61_2855 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D GYMC61_1475 ABC transporter related protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D GYMC61_2854 ABC transporter related protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D GYMC61_1612 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D GYMC61_2742 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D GYMC61_1613 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D GYMC61_2746 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D GYMC61_1614 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D GYMC61_2745 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D GYMC61_1615 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D GYMC61_2744 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D GYMC61_1616 ABC transporter related protein K10823 oppF; oligopeptide transport system ATP-binding protein
D GYMC61_1352 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYMC61_1353 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GYMC61_1354 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GYMC61_2743 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GYMC61_1049 periplasmic binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D GYMC61_1048 transport system permease protein K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D GYMC61_1047 transport system permease protein K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D GYMC61_1050 ABC transporter related protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D GYMC61_2264 periplasmic binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D GYMC61_2265 transport system permease protein K25110 sirB; iron-siderophore transport system permease protein
D GYMC61_2266 transport system permease protein K25111 sirC; iron-siderophore transport system permease protein
D GYMC61_2267 ABC transporter related protein K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D GYMC61_0550 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D GYMC61_3024 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D GYMC61_0552 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D GYMC61_2512 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D GYMC61_0416 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D GYMC61_0417 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D GYMC61_0418 protein of unknown function DUF105 K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D GYMC61_0580 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D GYMC61_0169 ABC-3 protein K09816 znuB; zinc transport system permease protein
D GYMC61_0168 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GYMC61_2619 Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D GYMC61_2618 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D GYMC61_2620 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D GYMC61_2617 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D GYMC61_3020 BioY protein K03523 bioY; biotin transport system substrate-specific component
D GYMC61_3097 BioY protein K03523 bioY; biotin transport system substrate-specific component
D GYMC61_0138 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D GYMC61_1413 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D GYMC61_0136 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYMC61_0137 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYMC61_1412 ABC transporter related protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYMC61_1411 ABC-type thiamin-related transport system, permease component 1, predicted K16925 ykoE; energy-coupling factor transport system permease protein
D GYMC61_1170 putative SpaE K20491 nisE; lantibiotic transport system permease protein
D GYMC61_1169 lantibiotic ABC transporter (permease) K20492 nisG; lantibiotic transport system permease protein
D GYMC61_1171 ABC transporter related protein K20490 nisF; lantibiotic transport system ATP-binding protein
D GYMC61_1697 ABC-2 type transporter K25140 drrB; daunorubicin/doxorubicin transport system permease protein
D GYMC61_1698 daunorubicin resistance ABC transporter ATPase subunit K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein
D GYMC61_1063 ABC-2 type transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D GYMC61_1062 ABC-2 type transporter K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D GYMC61_1061 ABC transporter related protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D GYMC61_0340 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein
D GYMC61_0341 ABC transporter related protein K11631 bceA; bacitracin transport system ATP-binding protein
D GYMC61_2463 conserved hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D GYMC61_2462 ABC transporter related protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D GYMC61_3188 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D GYMC61_3189 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GYMC61_1360 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein
D GYMC61_2321 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein
D GYMC61_2320 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein
D GYMC61_1359 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein
D GYMC61_2319 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D GYMC61_1358 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D GYMC61_1463 ABC transporter EcsB K25157 ecsB; ABC-2 type transport system permease protein
D GYMC61_1462 ABC transporter related protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D GYMC61_1451 ABC transporter (permease) (Na+ exclusion) K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYMC61_2486 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYMC61_1758 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYMC61_1578 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYMC61_1450 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_1577 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_1165 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_1439 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_1537 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_1569 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_1757 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_2485 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_2982 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_0297 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_1530 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYMC61_3314 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYMC61_1571 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYMC61_3074 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D GYMC61_2429 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D GYMC61_1506 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D GYMC61_1344 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D GYMC61_2316 major facilitator superfamily MFS_1 K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D GYMC61_2281 major facilitator superfamily MFS_1 K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D GYMC61_0360 major facilitator superfamily MFS_1 K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D GYMC61_0678 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D GYMC61_2675 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GYMC61_1203 major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D GYMC61_0753 major facilitator superfamily MFS_1 K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D GYMC61_2238 major facilitator superfamily MFS_1 K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D GYMC61_2534 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D GYMC61_1730 major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D GYMC61_1255 major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D GYMC61_0182 conserved hypothetical protein K08222 yqgE; MFS transporter, YQGE family, putative transporter
D GYMC61_3497 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D GYMC61_1787 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GYMC61_1786 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D GYMC61_3509 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYMC61_1785 PTS system, glucose-specific IIBC subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D GYMC61_0407 PTS system, N-acetylglucosamine-specific IIBC subunit K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D GYMC61_3507 PTS system, sucrose-specific IIBC subunit K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYMC61_2812 phosphotransferase system EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYMC61_3482 PTS system, beta-glucoside-specific IIABC subunit K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYMC61_2554 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D GYMC61_2649 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYMC61_2795 Protein-N(pi)-phosphohistidine--sugar phosphotransferase K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D GYMC61_2235 PTS system, fructose subfamily, IIC subunit K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195]
D GYMC61_2669 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2137 PTS system, lactose-specific IIa component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2670 phosphotransferase system lactose/cellobiose-specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2134 PTS system, lactose/cellobiose family IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYMC61_2668 PTS system, cellobiose-specific IIC subunit K02761 celB; cellobiose PTS system EIIC component
D GYMC61_2135 PTS system, cellobiose-specific IIC subunit K02761 celB; cellobiose PTS system EIIC component
D GYMC61_2933 putative PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GYMC61_2932 phosphotransferase system lactose/cellobiose-specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYMC61_2931 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D GYMC61_2222 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D GYMC61_2149 MIP family channel protein K02440 glpF; glycerol uptake facilitator
D GYMC61_3000 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D GYMC61_1362 Ion transport 2 domain protein K08713 lctB; potassium channel LctB
D GYMC61_2248 ammonium transporter K03320 amt; ammonium transporter, Amt family
D GYMC61_2576 ammonium transporter K03320 amt; ammonium transporter, Amt family
D GYMC61_0058 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D GYMC61_2162 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D GYMC61_3550 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D GYMC61_0987 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D GYMC61_0986 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D GYMC61_2406 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D GYMC61_1811 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D GYMC61_2424 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D GYMC61_0814 CrcB protein K06199 crcB; fluoride exporter
D GYMC61_0815 CrcB protein K06199 crcB; fluoride exporter
D GYMC61_3186 transporter K19059 merE; mercuric ion transport protein
D GYMC61_1419 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYMC61_1382 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYMC61_3283 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D GYMC61_1158 lantibiotic precursor K20482 nisA; lantibiotic bacteriocin
D GYMC61_1042 amino acid permease-associated region K02205 rocE; arginine/ornithine permease
D GYMC61_1754 amino acid permease-associated region K03758 arcD; arginine:ornithine antiporter / lysine permease
D GYMC61_2466 spore germination protein K06296 gerKB; spore germination protein KB
D GYMC61_2459 spore germination protein K06296 gerKB; spore germination protein KB
D GYMC61_0557 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D GYMC61_2198 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D GYMC61_1749 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D GYMC61_1398 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D GYMC61_2885 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein
D GYMC61_2425 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D GYMC61_2509 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D GYMC61_2780 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D GYMC61_1276 L-lactate transport K03303 lutP; lactate permease
D GYMC61_2098 choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter
D GYMC61_1302 calcium/proton antiporter, CaCA family K07300 chaA; Ca2+:H+ antiporter
D GYMC61_3516 sodium/proline symporter K11928 putP; sodium/proline symporter
D GYMC61_1718 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter
D GYMC61_0983 sodium:dicarboxylate symporter K11102 gltP; proton glutamate symport protein
D GYMC61_1379 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D GYMC61_2551 Na+/H+ antiporter NhaC-like protein K18218 tet35; tetracycline resistance efflux pump
D GYMC61_1782 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D GYMC61_1067 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D GYMC61_1826 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D GYMC61_3584 permease for cytosine/purines uracil thiamine allantoin K10974 codB; cytosine permease
D GYMC61_1913 uracil-xanthine permease K02824 uraA; uracil permease
D GYMC61_2388 xanthine permease K16169 pbuX; xanthine permease
D GYMC61_3466 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GYMC61_1115 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GYMC61_2507 Chromate transporter K07240 chrA; chromate transporter
D GYMC61_1019 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D GYMC61_3325 arsenical-resistance protein K03325 ACR3; arsenite transporter
D GYMC61_0933 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D GYMC61_2787 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D GYMC61_1477 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D GYMC61_1478 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D GYMC61_2790 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D GYMC61_2791 putative tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D GYMC61_2792 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D GYMC61_2572 conserved hypothetical protein K23675 fmnP; riboflavin transporter
D GYMC61_1851 cell cycle protein K03588 ftsW; cell division protein FtsW
D GYMC61_1892 stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D GYMC61_3431 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D GYMC61_0839 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D GYMC61_2974 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D GYMC61_2904 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D GYMC61_2128 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D GYMC61_2635 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_2636 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_2638 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GYMC61_3388 lipopolysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D GYMC61_2659 FeoA family protein K04758 feoA; ferrous iron transport protein A
D GYMC61_2276 FeoA family protein K04758 feoA; ferrous iron transport protein A
D GYMC61_2658 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D GYMC61_2274 Ferrous iron transport B domain protein K04759 feoB; ferrous iron transport protein B
D GYMC61_2993 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:gyc02044]
D GYMC61_0311 AAA ATPase K02450 gspA; general secretion pathway protein A
D GYMC61_0329 AAA ATPase K02450 gspA; general secretion pathway protein A
D GYMC61_1681 AAA ATPase K02450 gspA; general secretion pathway protein A
D GYMC61_0891 type II secretory pathway pseudopilin PulG K02650 pilA; type IV pilus assembly protein PilA
D GYMC61_0888 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D GYMC61_0890 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D GYMC61_0893 conserved hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D GYMC61_0894 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D GYMC61_0895 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D GYMC61_0889 twitching motility protein K02669 pilT; twitching motility protein PilT
D GYMC61_1906 protein of unknown function YGGT K02221 yggT; YggT family protein
D GYMC61_1000 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D GYMC61_1001 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D GYMC61_1002 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D GYMC61_3578 beta-lactamase domain protein K02238 comEC; competence protein ComEC
D GYMC61_0999 Pyrroline-5-carboxylate reductase K02239 comER; competence protein ComER
D GYMC61_3238 helicase domain protein K02240 comFA; competence protein ComFA
D GYMC61_3237 late competence protein K02242 comFC; competence protein ComFC
D GYMC61_0204 type II secretion system protein E K02243 comGA; competence protein ComGA
D GYMC61_0205 Type II secretion system F domain protein K02244 comGB; competence protein ComGB
D GYMC61_0206 DNA transport machinery (exogenous DNA-binding protein) K02245 comGC; competence protein ComGC
D GYMC61_0207 conserved hypothetical protein K02246 comGD; competence protein ComGD
D GYMC61_0208 conserved hypothetical protein K02247 comGE; competence protein ComGE
D GYMC61_0209 conserved hypothetical protein K02248 comGF; competence protein ComGF
D GYMC61_0210 conserved hypothetical protein K02249 comGG; competence protein ComGG
D GYMC61_0892 peptidase A24A domain protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GYMC61_1482 ComK family protein K02250 comK; competence protein ComK
D GYMC61_2022 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GYMC61_2021 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GYMC61_1991 conserved hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D GYMC61_3235 flagellar biosynthesis protein K04061 flhB2; flagellar biosynthesis protein
D GYMC61_2003 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GYMC61_2005 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D GYMC61_2006 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GYMC61_2015 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D GYMC61_2017 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GYMC61_2018 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GYMC61_2019 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GYMC61_2020 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GYMC61_2318 conserved hypothetical protein K20266 trbJ; type IV secretion system protein TrbJ
D GYMC61_3195 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYMC61_3262 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYMC61_0935 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D GYMC61_0092 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D GYMC61_3127 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D GYMC61_0127 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D GYMC61_1978 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYMC61_1976 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYMC61_0931 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D GYMC61_2629 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_3560 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYMC61_2352 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GYMC61_1104 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GYMC61_1105 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:gyc02042]
D GYMC61_1419 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYMC61_1382 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:gyc02022]
D GYMC61_0786 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_2329 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_1695 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GYMC61_0785 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D GYMC61_0403 multi-sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D GYMC61_0402 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD
D GYMC61_3537 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYMC61_3538 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR
D GYMC61_0342 integral membrane sensor signal transduction histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D GYMC61_0343 two component transcriptional regulator, winged helix family K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
D GYMC61_0524 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D GYMC61_0523 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR
D GYMC61_1167 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D GYMC61_1166 two component transcriptional regulator, winged helix family K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D GYMC61_1696 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D GYMC61_3241 Histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D GYMC61_3240 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU
D GYMC61_1315 integral membrane sensor signal transduction histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D GYMC61_1316 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR
D GYMC61_2911 two component transcriptional regulator, LuxR family K07696 nreC; two-component system, NarL family, response regulator NreC
D GYMC61_2643 integral membrane sensor signal transduction histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D GYMC61_2455 integral membrane sensor signal transduction histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D GYMC61_1736 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D GYMC61_3444 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D GYMC61_0256 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D GYMC61_1377 signal transduction histidine kinase regulating citrate/malate metabolism K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D GYMC61_1376 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR
D GYMC61_2789 signal transduction histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D GYMC61_2788 response regulator receiver and unknown domain protein K02475 K02475; two-component system, CitB family, response regulator
D GYMC61_0409 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D GYMC61_2026 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GYMC61_2016 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GYMC61_2129 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GYMC61_2025 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GYMC61_2809 integral membrane sensor signal transduction histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D GYMC61_2810 response regulator receiver protein K07719 glnL; two-component system, response regulator GlnL
D GYMC61_2719 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D GYMC61_3305 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D GYMC61_2718 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D GYMC61_2158 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:gyc02035]
D GYMC61_2026 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D GYMC61_2027 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D GYMC61_0324 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D GYMC61_2028 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D GYMC61_2029 CheD, stimulates methylation of MCP protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D GYMC61_0472 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D GYMC61_2025 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D GYMC61_2016 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GYMC61_2129 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D GYMC61_3428 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1248 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1795 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_2101 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1583 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_1675 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D GYMC61_2005 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D GYMC61_2006 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GYMC61_2007 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D GYMC61_2017 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D GYMC61_2018 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GYMC61_2019 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GYMC61_2020 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GYMC61_2022 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GYMC61_2021 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D GYMC61_2004 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GYMC61_2014 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GYMC61_2015 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D GYMC61_2003 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GYMC61_2013 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D GYMC61_2002 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GYMC61_2009 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D GYMC61_2000 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GYMC61_2001 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GYMC61_2010 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D GYMC61_3393 fagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D GYMC61_3392 fagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D GYMC61_2011 fagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D GYMC61_3228 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GYMC61_3227 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D GYMC61_3223 flagellin domain protein K02406 fliC; flagellin
D GYMC61_3233 flagellin domain protein K02406 fliC; flagellin
D GYMC61_3201 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D GYMC61_3200 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D GYMC61_3234 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D GYMC61_3199 flagellar protein K02423 fliT; flagellar protein FliT
D GYMC61_2030 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D GYMC61_0987 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D GYMC61_0986 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D GYMC61_3225 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW
D GYMC61_3230 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D GYMC61_3202 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D GYMC61_2012 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D GYMC61_2023 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D GYMC61_2024 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D GYMC61_0889 twitching motility protein K02669 pilT; twitching motility protein PilT
D GYMC61_0891 type II secretory pathway pseudopilin PulG K02650 pilA; type IV pilus assembly protein PilA
D GYMC61_0888 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D GYMC61_0890 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D GYMC61_0895 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D GYMC61_0894 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D GYMC61_0893 conserved hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:gyc04812]
D GYMC61_3394 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_0900 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_1278 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_1898 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYMC61_1897 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GYMC61_0903 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D GYMC61_0904 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D GYMC61_3553 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D GYMC61_3570 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D GYMC61_3552 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYMC61_3554 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:gyc04147]
D GYMC61_3133 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYMC61_3137 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYMC61_3136 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GYMC61_3098 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYMC61_0778 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYMC61_2089 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D GYMC61_1223 band 7 protein K07192 FLOT; flotillin
D GYMC61_1110 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYMC61_1013 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D GYMC61_3003 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYMC61_0009 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GYMC61_0105 translation elongation factor Tu K02358 tuf; elongation factor Tu
D GYMC61_1461 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYMC61_1361 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYMC61_1472 O-succinylbenzoate-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_1803 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_2975 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_0734 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GYMC61_2498 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_3453 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYMC61_0128 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GYMC61_0938 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GYMC61_0761 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GYMC61_0760 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GYMC61_2214 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D GYMC61_0536 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GYMC61_0558 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D GYMC61_2150 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GYMC61_2117 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_2480 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYMC61_0874 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GYMC61_2817 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D GYMC61_0816 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D GYMC61_0432 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GYMC61_1139 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GYMC61_0264 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_1835 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GYMC61_0831 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D GYMC61_0348 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GYMC61_3135 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:gyc02048]
D GYMC61_1188 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D GYMC61_1189 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D GYMC61_1186 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D GYMC61_1187 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D GYMC61_1190 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D GYMC61_1183 CRISPR-associated protein, TM1802 family K19114 csh1; CRISPR-associated protein Csh1
D GYMC61_1184 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D GYMC61_1185 CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h
D GYMC61_1193 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D GYMC61_1194 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D GYMC61_1195 CRISPR-associated protein, Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D GYMC61_1196 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D GYMC61_1197 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D GYMC61_1198 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D GYMC61_0288 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GYMC61_1672 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GYMC61_0287 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D GYMC61_1674 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D GYMC61_0286 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GYMC61_1673 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GYMC61_0285 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GYMC61_0730 N-6 DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D GYMC61_3572 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYMC61_2180 Type III site-specific deoxyribonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D GYMC61_2179 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GYMC61_2208 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GYMC61_0621 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D GYMC61_2172 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D GYMC61_3490 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D GYMC61_1093 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D GYMC61_2490 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D GYMC61_2489 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D GYMC61_1092 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D GYMC61_1521 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF
D GYMC61_3192 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
D GYMC61_2656 death-on-curing family protein K07341 doc; death on curing protein
D GYMC61_1898 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYMC61_3394 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_0900 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_1278 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D GYMC61_2557 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GYMC61_2558 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GYMC61_0916 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0953 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYMC61_0720 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:gyc04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:gyc04090]
C 01504 Antimicrobial resistance genes [BR:gyc01504]
D GYMC61_2551 Na+/H+ antiporter NhaC-like protein K18218 tet35; tetracycline resistance efflux pump
D GYMC61_2534 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D GYMC61_2421 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:gyc00537]
D GYMC61_0816 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D GYMC61_2089 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:gyc03100]
D GYMC61_R0115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0104 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0082 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0097 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYMC61_R0109 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0117 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0062 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0111 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0094 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYMC61_R0038 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYMC61_R0029 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYMC61_R0054 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYMC61_R0090 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYMC61_R0043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYMC61_R0057 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYMC61_R0074 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYMC61_R0051 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GYMC61_R0049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYMC61_R0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYMC61_R0058 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYMC61_R0107 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYMC61_R0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0092 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0031 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYMC61_R0064 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0088 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0078 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0112 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYMC61_R0048 tRNA-His K14226 tRNA-His; tRNA His
D GYMC61_R0087 tRNA-His K14226 tRNA-His; tRNA His
D GYMC61_R0002 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYMC61_R0008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYMC61_R0089 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYMC61_R0099 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYMC61_R0052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0079 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0103 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0061 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYMC61_R0016 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYMC61_R0033 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYMC61_R0059 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYMC61_R0077 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYMC61_R0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0083 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0084 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0042 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0073 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYMC61_R0044 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYMC61_R0075 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYMC61_R0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0096 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0081 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0063 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0108 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYMC61_R0102 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0085 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0091 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0098 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYMC61_R0030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0101 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0076 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0086 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYMC61_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GYMC61_R0046 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYMC61_R0100 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYMC61_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0041 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0072 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0093 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0105 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYMC61_R0069 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0026 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0114 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYMC61_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0024 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0066 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0113 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYMC61_R0106 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0068 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0067 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0071 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYMC61_R0006 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D GYMC61_R0116 ssrA; tmRNA as predicted by Rfam (RF00023), score 237.85 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GYMC61_2681 iron-containing alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-]
D GYMC61_3004 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D GYMC61_1517 Pyruvate dehydrogenase (acetyl-transferring) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D GYMC61_1518 Transketolase central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D GYMC61_1257 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D GYMC61_3451 acyl-CoA dehydrogenase domain protein K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D GYMC61_1807 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D GYMC61_1839 2-nitropropane dioxygenase NPD K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D GYMC61_0350 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D GYMC61_3492 NAD(P)H dehydrogenase (quinone) K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D GYMC61_0943 alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D GYMC61_0446 HI0933 family protein K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D GYMC61_0807 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D GYMC61_3115 manganese containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D GYMC61_1363 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GYMC61_0729 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GYMC61_0942 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D GYMC61_3182 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D GYMC61_2491 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D GYMC61_2544 globin K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D GYMC61_3185 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D GYMC61_3030 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D GYMC61_3324 arsenate reductase (thioredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D GYMC61_2381 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D GYMC61_0710 acetoin utilization protein K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D GYMC61_2991 Protein-glutamine gamma-glutamyltransferase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D GYMC61_3362 glycosidase PH1107-related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D GYMC61_0498 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D GYMC61_3250 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D GYMC61_3170 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GYMC61_3378 conserved hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D GYMC61_1964 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D GYMC61_1033 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D GYMC61_3163 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D GYMC61_1421 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D GYMC61_1201 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D GYMC61_2082 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D GYMC61_2085 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D GYMC61_0152 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D GYMC61_1318 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D GYMC61_0373 anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D GYMC61_3171 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D GYMC61_0078 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D GYMC61_3563 Formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D GYMC61_2633 BAAT/Acyl-CoA thioester hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D GYMC61_3126 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D GYMC61_2929 aryldialkylphosphatase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D GYMC61_3357 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D GYMC61_3129 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D GYMC61_2401 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GYMC61_2680 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GYMC61_2550 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GYMC61_2827 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GYMC61_0057 stage II sporulation protein E, protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D GYMC61_2722 HAD-superfamily hydrolase, subfamily IIA K02101 araL; sugar-phosphatase [EC:3.1.3.23]
D GYMC61_3384 Protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYMC61_0991 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D GYMC61_3542 diguanylate cyclase and phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D GYMC61_1025 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D GYMC61_2661 Endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D GYMC61_1040 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GYMC61_0032 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GYMC61_0034 primase/topoisomerase like protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D GYMC61_2995 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D GYMC61_2710 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D GYMC61_2695 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D GYMC61_2732 glycoside hydrolase family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D GYMC61_2728 conserved hypothetical protein K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D GYMC61_2706 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D GYMC61_0014 glycoside hydrolase family 18 K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-]
D GYMC61_2236 glycoside hydrolase family 38 K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D GYMC61_1952 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GYMC61_1831 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GYMC61_1081 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D GYMC61_2712 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D GYMC61_0497 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D GYMC61_1306 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D GYMC61_1285 LmbE family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D GYMC61_0041 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D GYMC61_1119 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GYMC61_3429 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D GYMC61_0226 spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D GYMC61_2333 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D GYMC61_2820 squalene/oxidosqualene cyclase K18115 sqhC; sporulenol synthase [EC:4.2.1.137]
D GYMC61_0661 Protein of unknown function DUF2600 K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D GYMC61_3448 methylmalonyl-CoA mutase, large subunit K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D GYMC61_1945 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D GYMC61_1548 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D GYMC61_3144 Phosphotransferase system, phosphocarrier protein HPr K11184 chr; catabolite repression HPr-like protein
D GYMC61_0709 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
D GYMC61_0708 Histone deacetylase K04768 acuC; acetoin utilization protein AcuC
D GYMC61_1274 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D GYMC61_1273 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D GYMC61_1272 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
D GYMC61_1883 protein of unknown function UCP012535 K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D GYMC61_1343 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D GYMC61_1703 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D GYMC61_0434 ferredoxin (4Fe-4S) K05337 fer; ferredoxin
D GYMC61_0159 cytochrome c class I K13300 cccA; cytochrome c550
D GYMC61_3190 cytochrome c class I K12263 cccB; cytochrome c551
D GYMC61_3071 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D GYMC61_2541 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein
D GYMC61_0830 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D GYMC61_3239 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D GYMC61_1542 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D GYMC61_3321 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D GYMC61_1904 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D GYMC61_0033 3D domain protein K21688 rpfB; resuscitation-promoting factor RpfB
D GYMC61_3475 cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase
D GYMC61_1776 cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase
D GYMC61_2132 cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D GYMC61_0389 GCN5-related N-acetyltransferase K02859 ribT; riboflavin biosynthesis RibT protein
D GYMC61_2561 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
D GYMC61_0740 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
D GYMC61_1585 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D GYMC61_2594 protein of unknown function DUF1094 K26958 brxA_B; bacilliredoxin
D GYMC61_0281 protein of unknown function DUF1094 K26958 brxA_B; bacilliredoxin
D GYMC61_0696 conserved hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GYMC61_2146 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D GYMC61_1618 arsenate reductase and related protein K16509 spxA; regulatory protein spx
D GYMC61_1094 Tex-like protein protein-like protein K06959 tex; protein Tex
D GYMC61_1947 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D GYMC61_3006 RNA binding S1 domain protein K07570 GSP13; general stress protein 13
D GYMC61_0056 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D GYMC61_0077 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator
D GYMC61_0864 trigger factor K03545 tig; trigger factor
D GYMC61_2770 UreE urease accessory domain protein K03187 ureE; urease accessory protein
D GYMC61_2769 Urease accessory protein UreF K03188 ureF; urease accessory protein
D GYMC61_2768 urease accessory protein UreG K03189 ureG; urease accessory protein
D GYMC61_2767 Urease accessory protein UreD K03190 ureD; urease accessory protein
D GYMC61_3124 SsrA-binding protein K03664 smpB; SsrA-binding protein
D GYMC61_2578 OsmC family protein K07397 yhfA; putative redox protein
D GYMC61_0400 ResB family protein K07399 resB; cytochrome c biogenesis protein
D GYMC61_1261 Xanthine dehydrogenase K07402 xdhC; xanthine dehydrogenase accessory factor
D GYMC61_0444 Negative regulator of genetic competence K16511 mecA1_2; adapter protein MecA 1/2
D GYMC61_1620 Negative regulator of genetic competence K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D GYMC61_0899 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D GYMC61_1994 DNA protecting protein DprA K04096 smf; DNA processing protein
D GYMC61_0509 primosome, DnaD subunit K02086 dnaD; DNA replication protein
D GYMC61_3082 TOPRIM domain protein K07476 yusF; toprim domain protein
D GYMC61_0950 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D GYMC61_3284 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D GYMC61_3166 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D GYMC61_2965 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D GYMC61_1268 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D GYMC61_1442 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D GYMC61_0543 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D GYMC61_1722 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_1508 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_2549 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_2840 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_2685 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_3343 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_0563 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_1250 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_2374 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_1982 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_1635 transposase, IS605 OrfB family K07496 K07496; putative transposase
D GYMC61_0312 Integrase catalytic region K07497 K07497; putative transposase
D GYMC61_0319 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D GYMC61_1204 phage shock protein A, PspA K03969 pspA; phage shock protein A
D GYMC61_0017 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GYMC61_3525 amino acid permease-associated region K03293 TC.AAT; amino acid transporter, AAT family
D GYMC61_1720 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GYMC61_0948 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D GYMC61_2849 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D GYMC61_3021 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D GYMC61_3338 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D GYMC61_2753 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D GYMC61_1231 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D GYMC61_2660 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D GYMC61_2825 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D GYMC61_2210 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D GYMC61_2759 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D GYMC61_0050 polysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D GYMC61_1582 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D GYMC61_0020 pro-sigmaK processing inhibitor BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D GYMC61_0925 Domain of unknown function DUF1901 K06318 bofC; forespore regulator of the sigma-K checkpoint
D GYMC61_2378 conserved hypothetical protein K06327 cotD; spore coat protein D
D GYMC61_2094 Spore coat protein CotE K06328 cotE; spore coat protein E
D GYMC61_1071 Coat F domain protein K06329 cotF; spore coat protein F
D GYMC61_1639 spore coat protein, CotS family K06331 cotI; spore coat protein I
D GYMC61_0442 CotJA protein K06332 cotJA; spore coat protein JA
D GYMC61_0441 CotJB protein K06333 cotJB; spore coat protein JB
D GYMC61_0440 Catalase K06334 cotJC; spore coat protein JC
D GYMC61_1638 glycosyl transferase group 1 K06338 cotSA; spore coat protein SA
D GYMC61_0923 Sporulation lipoprotein YhcN/YlaJ-like protein K06345 coxA; spore cortex protein
D GYMC61_3559 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D GYMC61_3013 Exonuclease RNase T and DNA polymerase III K06348 kapD; sporulation inhibitor KapD
D GYMC61_0146 KinB signaling pathway activation protein K06349 kbaA; KinB signaling pathway activation protein
D GYMC61_2337 urea amidolyase related protein K06350 kipA; antagonist of KipI
D GYMC61_2336 Allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
D GYMC61_0920 spore coat assembly protein SafA K06370 safA; morphogenetic protein associated with SpoVID
D GYMC61_0990 Sporulation inhibitor A K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D GYMC61_0396 nucleoside recognition domain protein K06373 spmA; spore maturation protein A
D GYMC61_0397 nucleoside recognition domain protein K06374 spmB; spore maturation protein B
D GYMC61_1070 SpoOM family protein K06377 spo0M; sporulation-control protein
D GYMC61_1236 SpoOM family protein K06377 spo0M; sporulation-control protein
D GYMC61_2148 SpoOM family protein K06377 spo0M; sporulation-control protein
D GYMC61_0372 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D GYMC61_2469 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D GYMC61_0897 conserved hypothetical protein K06380 spoIIB; stage II sporulation protein B
D GYMC61_0364 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D GYMC61_1007 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D GYMC61_3398 Peptidase M23 K06386 spoIIQ; stage II sporulation protein Q
D GYMC61_3433 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D GYMC61_0235 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D GYMC61_0236 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D GYMC61_0237 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D GYMC61_0238 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D GYMC61_0239 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D GYMC61_0240 stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D GYMC61_0241 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D GYMC61_0242 stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D GYMC61_0464 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D GYMC61_0592 Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase
D GYMC61_0906 Peptidase M23 K06401 spoIVFA; stage IV sporulation protein FA
D GYMC61_0375 stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D GYMC61_0376 stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D GYMC61_0377 SpoVA protein K06405 spoVAC; stage V sporulation protein AC
D GYMC61_1654 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D GYMC61_0378 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D GYMC61_1655 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D GYMC61_0380 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D GYMC61_1656 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D GYMC61_0379 SpoVA protein K06407 spoVAE; stage V sporulation protein AE
D GYMC61_0193 GerA spore germination protein K06408 spoVAF; stage V sporulation protein AF
D GYMC61_0381 GerA spore germination protein K06408 spoVAF; stage V sporulation protein AF
D GYMC61_2058 dipicolinic acid synthetase, A subunit K06410 spoVFA; dipicolinate synthase subunit A
D GYMC61_2059 dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B
D GYMC61_0042 SpoVG family protein K06412 spoVG; stage V sporulation protein G
D GYMC61_2104 stage V sporulation protein K K06413 spoVK; stage V sporulation protein K
D GYMC61_1961 Stage V sporulation family protein K06414 spoVM; stage V sporulation protein M
D GYMC61_1395 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D GYMC61_2088 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D GYMC61_0876 stage VI sporulation protein D K06417 spoVID; stage VI sporulation protein D
D GYMC61_3211 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D GYMC61_0722 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D GYMC61_1422 small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D GYMC61_1724 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D GYMC61_0038 small acid-soluble spore protein, minoralpha/beta-type SASP K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D GYMC61_2968 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor)
D GYMC61_2351 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor)
D GYMC61_2999 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor)
D GYMC61_0805 small, acid-soluble spore protein I K06426 sspI; small acid-soluble spore protein I (minor)
D GYMC61_1337 small, acid-soluble spore protein K K06428 sspK; small acid-soluble spore protein K (minor)
D GYMC61_2399 small acid-soluble spore N family protein K06431 sspN; small acid-soluble spore protein N (minor)
D GYMC61_2140 small, acid-soluble spore protein O K06432 sspO; small acid-soluble spore protein O (minor)
D GYMC61_2138 small acid-soluble spore P family protein K06433 sspP; small acid-soluble spore protein P (minor)
D GYMC61_2400 small, acid-soluble spore protein tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D GYMC61_0036 sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D GYMC61_1023 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D GYMC61_2355 Coat F domain protein K06439 yraD; similar to spore coat protein
D GYMC61_2356 spore coat protein K06440 yraG; similar to spore coat protein
D GYMC61_0145 spore germination protein GerD K06294 gerD; spore germination protein D
D GYMC61_2464 GerA spore germination protein K06295 gerKA; spore germination protein KA
D GYMC61_2458 GerA spore germination protein K06295 gerKA; spore germination protein KA
D GYMC61_1767 GerA spore germination protein K06295 gerKA; spore germination protein KA
D GYMC61_2465 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D GYMC61_2513 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D GYMC61_2457 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D GYMC61_0849 Lipoprotein LpqB, GerMN domain protein K06298 gerM; germination protein M
D GYMC61_1495 Spore germination protein gerPA/gerPF K06299 gerPA; spore germination protein PA
D GYMC61_1494 spore germination protein K06300 gerPB; spore germination protein PB
D GYMC61_1493 Spore germination protein GerPC K06301 gerPC; spore germination protein PC
D GYMC61_1492 spore germination protein K06302 gerPD; spore germination protein PD
D GYMC61_1491 spore germination protein K06303 gerPE; spore germination protein PE
D GYMC61_1490 Spore germination protein gerPA/gerPF K06304 gerPF; spore germination protein PF
D GYMC61_1496 Spore germination protein gerPA/gerPF K06304 gerPF; spore germination protein PF
D GYMC61_3476 spore coat protein GerQ K06305 gerQ; spore germination protein Q
D GYMC61_1768 germination protein, Ger(x)C family K06308 yfkR; spore germination protein
D GYMC61_0450 germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D GYMC61_1403 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D GYMC61_1843 GTP-binding protein TypA K06207 typA; GTP-binding protein
D GYMC61_1024 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D GYMC61_1848 PhoH family protein K07175 phoH2; PhoH-like ATPase
D GYMC61_1372 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D GYMC61_2249 protein of unknown function DUF294 nucleotidyltransferase putative K07182 K07182; CBS domain-containing protein
D GYMC61_1539 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D GYMC61_0871 cytochrome c assembly protein K02497 hemX; HemX protein
C 99994 Others
D GYMC61_0812 DNA binding domain protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein
D GYMC61_2972 protein of unknown function DUF1648 K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GYMC61_1622 Competence CoiA family protein K06198 coiA; competence protein CoiA
D GYMC61_2375 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D GYMC61_0691 t-RNA-binding domain protein K06878 K06878; tRNA-binding protein
D GYMC61_1626 globin K06886 glbN; hemoglobin
D GYMC61_0818 MMPL domain protein K06994 K06994; putative drug exporter of the RND superfamily
D GYMC61_0228 Patatin K07001 K07001; NTE family protein
D GYMC61_1874 Lysophospholipase K07001 K07001; NTE family protein
D GYMC61_3213 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D GYMC61_3070 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D GYMC61_3073 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D GYMC61_2634 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D GYMC61_1338 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D GYMC61_2342 Aryldialkylphosphatase K07048 PTER; phosphotriesterase-related protein
D GYMC61_1298 ribonuclease BN K07058 K07058; membrane protein
D GYMC61_1859 cytochrome c oxidase assembly factor CtaG K02862 ctaG; putative membrane protein
D GYMC61_1096 protein of unknown function DUF335 SprT K03095 sprL; SprT-like protein
D GYMC61_1210 YhgE/Pip C-terminal domain protein K01421 yhgE; putative membrane protein
D GYMC61_2510 YhgE/Pip N-terminal domain protein K01421 yhgE; putative membrane protein
D GYMC61_2902 protein of unknown function DUF202 K00389 yidH; putative membrane protein
D GYMC61_3172 membrane protein of unknown function K08972 K08972; putative membrane protein
D GYMC61_1860 protein of unknown function DUF420 K08976 K08976; putative membrane protein
D GYMC61_2526 membrane-flanked domain protein K08981 K08981; putative membrane protein
D GYMC61_2565 conserved hypothetical protein K08984 yjdF; putative membrane protein
D GYMC61_2647 Protein of unknown function DUF1980 K08986 ycgQ; putative membrane protein
D GYMC61_0825 protein of unknown function DUF350 K08989 K08989; putative membrane protein
C 99997 Function unknown
D GYMC61_1441 Radical SAM domain protein K06871 K06871; uncharacterized protein
D GYMC61_3468 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D GYMC61_1546 conserved hypothetical protein K06889 K06889; uncharacterized protein
D GYMC61_2325 conserved hypothetical protein K06889 K06889; uncharacterized protein
D GYMC61_2364 protein of unknown function UPF0005 K06890 K06890; uncharacterized protein
D GYMC61_2559 CoA-binding domain protein K06929 K06929; uncharacterized protein
D GYMC61_1702 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D GYMC61_1980 RNA-binding protein K06960 K06960; uncharacterized protein
D GYMC61_0089 protein of unknown function DUF901 K06962 K06962; uncharacterized protein
D GYMC61_1381 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D GYMC61_2435 GCN5-related N-acetyltransferase K06976 K06976; uncharacterized protein
D GYMC61_1333 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein
D GYMC61_1691 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D GYMC61_2648 permease K07089 K07089; uncharacterized protein
D GYMC61_0315 permease K07089 K07089; uncharacterized protein
D GYMC61_3061 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D GYMC61_2888 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D GYMC61_2481 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D GYMC61_0852 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D GYMC61_2539 conserved hypothetical protein K07097 K07097; uncharacterized protein
D GYMC61_2663 metallophosphoesterase K07098 K07098; uncharacterized protein
D GYMC61_1817 metallophosphoesterase K07098 K07098; uncharacterized protein
D GYMC61_0915 3H domain protein K07105 K07105; uncharacterized protein
D GYMC61_2163 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D GYMC61_2363 membrane protein AbrB duplication K07120 K07120; uncharacterized protein
D GYMC61_0353 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D GYMC61_2408 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D GYMC61_1499 protein of unknown function DUF405 K07148 K07148; uncharacterized protein
D GYMC61_0582 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D GYMC61_1021 Protein of unknown function K09117 K09117; uncharacterized protein
D GYMC61_2173 Domain of unknown function DUF2357 K09124 K09124; uncharacterized protein
D GYMC61_2525 membrane-flanked domain protein K09167 K09167; uncharacterized protein
D GYMC61_3467 conserved hypothetical protein K09388 K09388; uncharacterized protein
D GYMC61_3585 protein of unknown function DUF917 K09703 K09703; uncharacterized protein
D GYMC61_3582 protein of unknown function DUF917 K09703 K09703; uncharacterized protein
D GYMC61_3294 protein of unknown function DUF1284 K09706 K09706; uncharacterized protein
D GYMC61_0390 protein of unknown function DUF309 K09763 K09763; uncharacterized protein
D GYMC61_2048 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D GYMC61_3232 protein of unknown function DUF327 K09770 K09770; uncharacterized protein
D GYMC61_3005 protein of unknown function DUF378 K09779 K09779; uncharacterized protein
D GYMC61_1373 sporulation protein YhbH K09786 K09786; uncharacterized protein
D GYMC61_1977 putative helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein
D GYMC61_2240 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D GYMC61_1325 Protein of unknown function DUF2309 K09822 K09822; uncharacterized protein
D GYMC61_2720 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D GYMC61_3297 protein of unknown function DUF779 K09959 K09959; uncharacterized protein
D GYMC61_2811 protein of unknown function DUF871 K09963 K09963; uncharacterized protein
D GYMC61_2124 protein of unknown function UPF0154 K09976 K09976; uncharacterized protein
D GYMC61_0171 conserved hypothetical protein K05967 K05967; uncharacterized protein
D GYMC61_0458 conserved hypothetical protein K05739 seaA; uncharacterized protein
D GYMC61_2376 conserved hypothetical protein K07502 yprB; uncharacterized protein
D GYMC61_0909 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein
D GYMC61_3022 Putative phosphate transport regulator K07220 K07220; uncharacterized protein
D GYMC61_1350 protein of unknown function DUF402 K07586 ygaC; uncharacterized protein
D GYMC61_2045 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 14, 2024