+D GENES KO
#
KEGG Orthology (KO) - Haemophilus influenzae Hi375
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hih00010]
D NF38_07675 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NF38_00060 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NF38_08045 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NF38_01795 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NF38_02455 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NF38_01740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NF38_05485 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NF38_02450 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NF38_01170 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NF38_00305 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NF38_07660 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NF38_06065 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NF38_06060 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_04505 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NF38_00850 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NF38_07300 glucose-6-phosphate 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D NF38_00895 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NF38_05670 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:hih00020]
D NF38_05920 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NF38_05925 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_08160 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NF38_08165 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NF38_00765 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NF38_00770 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NF38_00775 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D NF38_00780 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D NF38_06820 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NF38_08095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NF38_00895 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NF38_06065 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NF38_06060 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hih00030]
D NF38_07675 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NF38_02290 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NF38_02295 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D NF38_02310 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NF38_02250 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NF38_08920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NF38_08500 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NF38_02740 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D NF38_08545 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D NF38_02540 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D NF38_07845 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NF38_05245 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NF38_05230 ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D NF38_02455 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NF38_08045 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NF38_01795 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NF38_00060 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:hih00040]
D NF38_05240 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D NF38_05200 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D NF38_00880 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NF38_02250 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NF38_08560 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D NF38_08565 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NF38_01395 fucI; sugar isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D NF38_01400 L-fuculose kinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D NF38_01410 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:hih00051]
D NF38_01235 alpha-D-phosphohexomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NF38_01395 fucI; sugar isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D NF38_01400 L-fuculose kinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D NF38_01410 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D NF38_00060 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NF38_08045 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NF38_01795 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NF38_02830 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D NF38_08565 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NF38_02455 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NF38_01740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NF38_02835 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:hih00052]
D NF38_00850 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NF38_00845 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D NF38_00840 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D NF38_03625 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NF38_00880 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NF38_00060 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:hih00500]
D NF38_00880 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NF38_06600 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D NF38_06605 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D NF38_06590 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NF38_06610 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D NF38_06595 glycogen debranching protein K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D NF38_06585 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D NF38_05670 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NF38_07675 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hih00520]
D NF38_00165 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NF38_05670 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NF38_04520 N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D NF38_04720 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D NF38_04715 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D NF38_02925 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NF38_07200 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D NF38_01940 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NF38_08705 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NF38_04060 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NF38_04700 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D NF38_04695 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D NF38_04710 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D NF38_06255 acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D NF38_00880 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NF38_00845 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D NF38_00840 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D NF38_03625 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NF38_07675 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NF38_01235 alpha-D-phosphohexomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NF38_06600 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:hih00620]
D NF38_06065 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NF38_06060 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_04530 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NF38_04505 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NF38_08125 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NF38_08130 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NF38_07660 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NF38_03030 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NF38_00105 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NF38_00100 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NF38_06185 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NF38_05515 lldD; lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D NF38_05065 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D NF38_05980 lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D NF38_03765 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D NF38_06230 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NF38_05915 beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NF38_06120 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NF38_08095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NF38_06820 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NF38_00765 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NF38_00770 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NF38_00775 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D NF38_00780 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D NF38_08000 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NF38_00895 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_00040 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hih00630]
D NF38_08095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_00325 catalase K03781 katE; catalase [EC:1.11.1.6]
D NF38_07585 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D NF38_02255 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NF38_00610 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NF38_00525 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_05015 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NF38_05245 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NF38_05455 formate dehydrogenase major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D NF38_05460 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D NF38_05450 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D NF38_05445 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma
D NF38_07730 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:hih00640]
D NF38_08125 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NF38_08130 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_04530 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NF38_03030 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NF38_00105 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NF38_00100 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NF38_06185 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NF38_08165 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NF38_08160 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NF38_06070 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:hih00650]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_01075 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D NF38_01080 acetate CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D NF38_00765 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NF38_00770 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NF38_00775 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D NF38_00780 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D NF38_04530 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NF38_07715 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NF38_07710 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:hih00660]
D NF38_07715 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NF38_07710 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NF38_08165 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NF38_08160 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NF38_00030 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NF38_00025 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NF38_00035 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:hih00562]
D NF38_00280 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NF38_01740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hih00190]
D NF38_01215 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D NF38_00765 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NF38_00770 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NF38_00775 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D NF38_00780 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D NF38_08740 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NF38_08745 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NF38_02655 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NF38_02665 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NF38_02660 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NF38_02650 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NF38_02670 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NF38_02635 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NF38_02645 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NF38_02640 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NF38_04780 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:hih00680]
D NF38_04505 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NF38_04510 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D NF38_05455 formate dehydrogenase major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D NF38_05460 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D NF38_05450 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D NF38_05445 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma
D NF38_00525 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NF38_07585 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D NF38_00305 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NF38_08000 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NF38_08095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NF38_02455 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NF38_08045 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NF38_01795 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D NF38_00060 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NF38_01910 nitrate reductase K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D NF38_01915 trimethylamine N-oxide reductase I catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D NF38_08125 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NF38_08130 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NF38_01170 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NF38_02735 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NF38_08305 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NF38_08915 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:hih00910]
D NF38_03660 nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D NF38_03645 diacylglycerol kinase K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D NF38_08765 nrfA; cytochrome C nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D NF38_04480 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D NF38_00610 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NF38_02125 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D NF38_07420 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:hih00920]
D NF38_02285 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NF38_01735 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D NF38_01445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NF38_08595 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NF38_06200 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NF38_05060 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NF38_08855 dimethyl sulfoxide reductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D NF38_08860 dimethyl sulfoxide reductase K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D NF38_08865 dimethyl sulfoxide reductase K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hih00061]
D NF38_03030 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NF38_00105 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NF38_00100 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NF38_06185 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NF38_04650 acyl carrier protein K02078 acpP; acyl carrier protein
D NF38_04640 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NF38_04635 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NF38_07480 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NF38_04645 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NF38_07260 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D NF38_08795 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NF38_05570 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NF38_03105 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_05480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:hih00071]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_03105 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_05480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_04505 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hih00561]
D NF38_05015 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NF38_01685 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NF38_01210 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NF38_04070 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NF38_01275 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NF38_03705 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:hih00564]
D NF38_01450 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D NF38_01705 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D NF38_01710 glycerol-3-phosphate dehydrogenase K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D NF38_01715 glpC; glycerol-3-phosphate dehydrogenase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D NF38_01210 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NF38_04070 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NF38_01275 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NF38_03705 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NF38_01905 hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D NF38_01695 phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D NF38_00380 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D NF38_02945 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NF38_04620 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D NF38_04800 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D NF38_07395 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D NF38_04375 phosphatidylglycerophosphatase K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:hih01040]
D NF38_05095 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D NF38_00805 acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hih00230]
D NF38_03065 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D NF38_07845 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NF38_08110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NF38_00535 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D NF38_07015 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NF38_01190 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D NF38_07020 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D NF38_07890 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D NF38_07885 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D NF38_05605 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D NF38_01955 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NF38_00540 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NF38_06050 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NF38_07345 5'-3'-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D NF38_04395 metallophosphatase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NF38_01635 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NF38_02485 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D NF38_04555 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NF38_08370 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D NF38_04285 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NF38_00595 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NF38_04105 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D NF38_01680 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D NF38_01760 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D NF38_04280 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NF38_05490 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D NF38_05935 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NF38_05930 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NF38_05100 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D NF38_06515 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D NF38_05500 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NF38_03710 relA; (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D NF38_01455 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D NF38_07985 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NF38_02160 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D NF38_03635 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NF38_02760 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NF38_03060 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D NF38_02320 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D NF38_02380 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D NF38_02375 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D NF38_02370 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D NF38_02125 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:hih00240]
D NF38_06835 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D NF38_04040 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D NF38_06020 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D NF38_08785 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D NF38_00595 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NF38_02760 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NF38_08730 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D NF38_05995 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D NF38_04770 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D NF38_07345 5'-3'-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D NF38_04395 metallophosphatase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NF38_01635 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NF38_03980 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D NF38_06040 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D NF38_02765 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D NF38_02160 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D NF38_06555 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D NF38_05100 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D NF38_04765 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D NF38_05935 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NF38_05930 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NF38_02780 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D NF38_00190 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NF38_02430 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D NF38_00450 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NF38_07025 malonic semialdehyde reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hih00250]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NF38_02260 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D NF38_03950 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NF38_02405 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D NF38_05600 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NF38_00885 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NF38_07985 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NF38_01955 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NF38_04480 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D NF38_00610 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NF38_02925 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NF38_08110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hih00260]
D NF38_05025 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NF38_01900 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NF38_05030 serine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D NF38_05035 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NF38_00525 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NF38_07585 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D NF38_05015 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NF38_01170 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NF38_02735 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NF38_08305 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NF38_08915 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D NF38_07025 malonic semialdehyde reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_02945 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NF38_03940 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D NF38_01245 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NF38_07035 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NF38_07030 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D NF38_00215 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D NF38_00230 2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:hih00270]
D NF38_01445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NF38_08595 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NF38_04810 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NF38_08570 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NF38_05715 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NF38_08280 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NF38_08065 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D NF38_04555 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NF38_06795 XRE family transcriptional regulator K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_03205 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_06675 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_02605 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D NF38_05025 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NF38_01900 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NF38_06200 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NF38_05060 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NF38_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NF38_08095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NF38_03940 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D NF38_02735 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NF38_08305 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hih00280]
D NF38_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hih00290]
D NF38_01245 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NF38_00030 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NF38_00025 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NF38_00035 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D NF38_07715 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NF38_07710 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NF38_01720 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NF38_01250 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NF38_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NF38_03950 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NF38_00040 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:hih00300]
D NF38_05025 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NF38_01900 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NF38_04130 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NF38_07385 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D NF38_07990 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D NF38_04965 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NF38_01200 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NF38_01305 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NF38_08470 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NF38_08465 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:hih00310]
D NF38_05925 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_01075 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D NF38_01080 acetate CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00220 Arginine biosynthesis [PATH:hih00220]
D NF38_02120 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D NF38_05600 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NF38_00885 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NF38_02380 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D NF38_02375 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D NF38_02370 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D NF38_00610 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NF38_04480 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D NF38_02125 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NF38_03950 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:hih00330]
D NF38_02570 oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D NF38_03835 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D NF38_00470 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NF38_06090 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:hih00340]
D NF38_02715 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D NF38_02680 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D NF38_02690 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D NF38_02695 imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D NF38_02685 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D NF38_02700 imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D NF38_08310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_02705 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_02710 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:hih00350]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NF38_08310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_02705 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_04505 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:hih00360]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NF38_08310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_02705 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:hih00380]
D NF38_05925 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_01615 tnaA; cysteine desulfhydrase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D NF38_00325 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hih00400]
D NF38_07540 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NF38_04385 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D NF38_00110 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D NF38_01845 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D NF38_04390 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D NF38_07735 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D NF38_04445 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D NF38_06755 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NF38_06760 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NF38_06770 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D NF38_06775 indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D NF38_07035 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NF38_07030 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D NF38_06475 prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D NF38_08410 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NF38_08310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_02705 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:hih00430]
D NF38_08130 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NF38_08125 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:hih00450]
D NF38_05060 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NF38_04810 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NF38_08570 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NF38_05715 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NF38_08345 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NF38_04425 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D NF38_01595 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D NF38_06240 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:hih00460]
D NF38_02260 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D NF38_00525 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hih00470]
D NF38_07670 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NF38_08435 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NF38_05510 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D NF38_08455 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NF38_01200 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NF38_01305 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:hih00480]
D NF38_05590 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D NF38_05580 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D NF38_05585 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D NF38_05700 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NF38_00600 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D NF38_07870 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NF38_01755 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D NF38_04895 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NF38_04615 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D NF38_02310 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NF38_02290 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NF38_02220 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:hih00540]
D NF38_08800 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NF38_08415 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NF38_00400 lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NF38_01270 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D NF38_08805 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NF38_05180 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D NF38_05850 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D NF38_07590 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D NF38_05845 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D NF38_05185 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D NF38_01865 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D NF38_07450 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NF38_04430 lauroyl acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D NF38_04100 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D NF38_08240 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D NF38_07445 heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D NF38_01350 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D NF38_08555 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D NF38_08585 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis [PATH:hih00542]
D NF38_05635 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hih00541]
D NF38_00880 nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NF38_03625 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NF38_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NF38_01235 alpha-D-phosphohexomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NF38_01940 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NF38_06255 acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
C 00550 Peptidoglycan biosynthesis [PATH:hih00550]
D NF38_08705 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NF38_04060 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NF38_08440 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NF38_08455 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NF38_08470 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NF38_08435 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NF38_08465 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NF38_00375 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NF38_08460 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NF38_08445 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NF38_00785 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NF38_02870 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NF38_05610 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NF38_05325 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NF38_08475 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NF38_05340 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NF38_07230 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:hih00552]
D NF38_05635 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NF38_07505 lipopolysaccharide cholinephosphotransferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:hih00543]
D NF38_05635 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NF38_01445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hih00730]
D NF38_02980 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D NF38_03500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NF38_07070 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D NF38_07085 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NF38_02985 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D NF38_02975 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D NF38_07400 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D NF38_05655 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NF38_03635 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NF38_03600 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:hih00740]
D NF38_04370 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NF38_00245 ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NF38_01125 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D NF38_07410 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D NF38_07865 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D NF38_00145 FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D NF38_02590 acid phosphatase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2]
D NF38_02985 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D NF38_03065 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:hih00750]
D NF38_00625 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D NF38_08305 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NF38_05035 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NF38_05990 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D NF38_05985 glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hih00760]
D NF38_02485 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D NF38_01130 ribosylnicotinamide kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D NF38_07345 5'-3'-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D NF38_04395 metallophosphatase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D NF38_01635 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NF38_02760 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NF38_02910 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D NF38_07340 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D NF38_05120 ppnK; inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D NF38_06615 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NF38_06620 pntB; pyridine nucleotide transhydrogenase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:hih00770]
D NF38_07715 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NF38_07710 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NF38_01720 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NF38_01250 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NF38_02015 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D NF38_00195 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D NF38_02760 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NF38_01870 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D NF38_00520 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D NF38_04660 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D NF38_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:hih00780]
D NF38_07560 malonyl-CoA O-methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D NF38_07480 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NF38_04645 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NF38_08795 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NF38_05570 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NF38_07565 hypothetical protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D NF38_07570 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NF38_07575 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NF38_07115 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D NF38_07555 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D NF38_08925 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D NF38_04290 acetyl-COA carboxylase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:hih00785]
D NF38_05350 lipoate--protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D NF38_05355 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_06065 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NF38_06060 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NF38_05920 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NF38_05925 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:hih00790]
D NF38_07125 folE; GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D NF38_03795 dihydroneopterin triphosphate pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D NF38_04075 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D NF38_05155 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D NF38_07205 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D NF38_00475 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NF38_06190 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D NF38_04370 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NF38_08285 anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D NF38_08290 aminobenzoate synthetase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D NF38_08295 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D NF38_08195 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D NF38_08200 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NF38_08190 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NF38_06480 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NF38_05860 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NF38_05865 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NF38_05875 moaE; molybdopterin guanine dinucleotide biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NF38_03700 mogA; molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NF38_07130 molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D NF38_00725 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:hih00670]
D NF38_00475 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NF38_01430 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NF38_00525 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NF38_07015 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NF38_00540 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NF38_02055 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NF38_00450 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NF38_07730 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D NF38_07110 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NF38_00655 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hih00860]
D NF38_04025 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NF38_08335 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D NF38_01460 HemX protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D NF38_00675 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hih00130]
D NF38_03960 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D NF38_03965 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D NF38_03970 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D NF38_00115 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D NF38_04455 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D NF38_00120 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D NF38_08330 esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D NF38_02520 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D NF38_07525 NAD(P)H oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hih00900]
D NF38_07085 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NF38_00905 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D NF38_01770 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D NF38_07840 kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D NF38_01775 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D NF38_03550 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D NF38_08950 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_07080 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NF38_00570 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NF38_00375 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D NF38_08920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D NF38_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D NF38_03960 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D NF38_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:hih00332]
D NF38_00470 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NF38_06090 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:hih00261]
D NF38_05025 thrA; aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NF38_01900 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NF38_04130 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NF38_07385 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hih00521]
D NF38_00280 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NF38_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D NF38_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:hih00401]
D NF38_06475 prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NF38_08310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_02705 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D NF38_06755 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NF38_06760 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D NF38_04640 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NF38_04645 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NF38_05570 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D NF38_04650 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hih00999]
D NF38_08280 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NF38_01845 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D NF38_01075 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D NF38_01080 acetate CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:hih00625]
D NF38_04505 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D NF38_02380 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D NF38_02375 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D NF38_02370 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:hih00626]
D NF38_04505 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hih03020]
D NF38_02500 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NF38_02505 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NF38_00930 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NF38_05495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hih03010]
D NF38_06000 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NF38_00410 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NF38_01030 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NF38_00935 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NF38_00970 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NF38_02340 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NF38_02175 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NF38_00985 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NF38_07100 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NF38_01065 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NF38_00940 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NF38_02170 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NF38_00945 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NF38_00990 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NF38_07245 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NF38_04405 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NF38_01015 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NF38_02350 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NF38_01040 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NF38_00135 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NF38_02420 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NF38_02495 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NF38_01045 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NF38_01060 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NF38_01055 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NF38_00995 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NF38_00980 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NF38_01945 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NF38_02355 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NF38_01950 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NF38_02490 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NF38_07105 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NF38_01005 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NF38_00960 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NF38_01025 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NF38_00925 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NF38_00975 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NF38_04420 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NF38_07285 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NF38_00575 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NF38_01035 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NF38_01050 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NF38_01000 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NF38_07955 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D NF38_00580 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NF38_00205 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NF38_01020 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NF38_00965 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NF38_01165 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NF38_04630 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NF38_00210 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NF38_08990 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NF38_07290 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NF38_00950 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NF38_01510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04865 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_05520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_02090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_01345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04305 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_04875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_05535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_01330 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_01495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_02080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_01485 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_01325 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_02075 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_01490 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_05540 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_04310 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_04880 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hih00970]
D NF38_04030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NF38_01335 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NF38_01500 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NF38_05530 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NF38_01420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NF38_01925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NF38_01930 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NF38_04850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NF38_01140 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NF38_06135 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NF38_01480 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NF38_04740 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NF38_04745 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NF38_05050 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NF38_07960 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NF38_07965 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NF38_02085 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NF38_04870 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NF38_04300 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NF38_04795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_05640 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_05055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_05645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_02000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_04855 tRNA-His K14226 tRNA-His; tRNA His
D NF38_01340 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NF38_01505 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NF38_05525 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NF38_02840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_04790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_05045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_06995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_07970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_03155 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NF38_04785 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NF38_05040 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NF38_03160 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NF38_04840 tRNA-Met K14230 tRNA-Met; tRNA Met
D NF38_06425 tRNA-Met K14230 tRNA-Met; tRNA Met
D NF38_00355 tRNA-Met K14230 tRNA-Met; tRNA Met
D NF38_07975 tRNA-Met K14230 tRNA-Met; tRNA Met
D NF38_01145 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NF38_01425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NF38_04860 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NF38_03745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NF38_05260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NF38_01920 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NF38_04115 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NF38_01995 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NF38_02010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NF38_03335 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NF38_01475 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NF38_02005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NF38_04005 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_04020 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_04015 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_04010 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_07655 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_01600 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D NF38_04025 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NF38_06575 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NF38_00870 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NF38_03790 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NF38_07415 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NF38_00330 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NF38_00350 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NF38_06640 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NF38_04900 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NF38_01595 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D NF38_05090 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NF38_06240 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NF38_02055 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NF38_06785 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NF38_00370 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NF38_00150 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NF38_08090 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NF38_07705 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NF38_01290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NF38_03545 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NF38_07370 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NF38_07365 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NF38_07850 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NF38_01965 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hih03060]
D NF38_00955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NF38_01550 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NF38_02845 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NF38_04200 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NF38_04205 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NF38_04195 membrane protein K03210 yajC; preprotein translocase subunit YajC
D NF38_08975 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NF38_00430 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NF38_01230 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D NF38_04925 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NF38_01105 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NF38_04495 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA
D NF38_04490 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D NF38_04485 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D NF38_05410 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NF38_08955 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hih04122]
D NF38_03500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NF38_01525 sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D NF38_04190 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D NF38_02190 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D NF38_02195 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D NF38_02200 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D NF38_06660 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D NF38_04560 mnmA; tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NF38_05875 moaE; molybdopterin guanine dinucleotide biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NF38_05860 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NF38_05870 molybdopterin synthase K03636 moaD; sulfur-carrier protein
D NF38_07135 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D NF38_05865 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NF38_03700 mogA; molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NF38_07070 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:hih03018]
D NF38_00465 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NF38_02995 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NF38_00510 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D NF38_00305 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NF38_04245 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NF38_00640 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NF38_04235 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NF38_01295 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NF38_03895 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NF38_00060 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NF38_06080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NF38_02360 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NF38_03005 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D NF38_05160 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hih03030]
D NF38_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NF38_01240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NF38_06045 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NF38_02790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NF38_00360 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NF38_05430 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NF38_06805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NF38_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NF38_07665 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NF38_02415 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NF38_04155 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_03230 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_04730 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NF38_08810 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NF38_00665 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NF38_08610 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hih03410]
D NF38_05780 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NF38_05395 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D NF38_01160 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NF38_00235 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NF38_01855 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NF38_05280 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NF38_00665 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NF38_08075 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NF38_08610 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hih03420]
D NF38_06175 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NF38_04160 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D NF38_06130 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D NF38_05190 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D NF38_08210 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NF38_00665 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NF38_08610 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hih03430]
D NF38_01605 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NF38_05140 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D NF38_03040 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D NF38_08210 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NF38_06705 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D NF38_03070 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NF38_07075 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NF38_08075 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NF38_04155 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_03230 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_01240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NF38_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NF38_06045 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NF38_00360 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NF38_02790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NF38_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NF38_06805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NF38_05430 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NF38_08610 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NF38_04380 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:hih03440]
D NF38_08075 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NF38_04155 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_03230 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_00015 DNA replication protein RecF K03629 recF; DNA replication and repair protein RecF
D NF38_03720 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NF38_02855 recR; recombination protein RecR K06187 recR; recombination protein RecR
D NF38_02100 recombinase RecA K03553 recA; recombination protein RecA
D NF38_00665 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NF38_03810 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NF38_03815 ruvB; ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NF38_03805 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NF38_04940 ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NF38_05505 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NF38_07280 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D NF38_00255 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D NF38_07275 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D NF38_01240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NF38_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NF38_06045 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NF38_00360 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NF38_02790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NF38_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NF38_06805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NF38_05430 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NF38_03685 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NF38_02345 primosomal replication protein N K02686 priB; primosomal replication protein N
D NF38_03750 primosomal replication protein N K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hih02010]
D NF38_03605 thiamine biosynthesis protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D NF38_03610 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D NF38_03615 phosphonate ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D NF38_05760 molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NF38_05765 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D NF38_05770 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NF38_04985 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NF38_04980 Fe3+ dicitrate ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D NF38_04975 peptide ABC transporter substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NF38_08940 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D NF38_08935 thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein
D NF38_08930 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D NF38_02575 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NF38_06525 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NF38_06530 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D NF38_06535 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D NF38_06540 potA; putrescine/spermidine ABC transporter ATPase K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D NF38_08690 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D NF38_08685 toluene ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NF38_08680 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NF38_08695 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D NF38_08675 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NF38_02545 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D NF38_02550 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D NF38_02555 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D NF38_02560 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D NF38_00830 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D NF38_00820 mglC; beta-methylgalactoside transporter permease K10541 mglC; methyl-galactoside transport system permease protein
D NF38_00825 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D NF38_06735 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NF38_06730 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D NF38_06725 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D NF38_06720 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NF38_08250 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D NF38_08260 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D NF38_08255 ABC transporter K09999 artQ; arginine transport system permease protein
D NF38_08245 arginine ABC transporter ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D NF38_08710 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NF38_08715 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D NF38_08720 amino acid ABC transporter ATPase K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D NF38_01365 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D NF38_01360 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D NF38_01355 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D NF38_08505 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NF38_08510 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D NF38_08515 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D NF38_08520 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D NF38_08525 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D NF38_00680 peptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D NF38_08215 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D NF38_08220 peptide transporter K12370 dppC; dipeptide transport system permease protein
D NF38_08225 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D NF38_08230 dppF; peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D NF38_08010 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D NF38_08015 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D NF38_08020 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein
D NF38_08025 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D NF38_08030 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D NF38_04825 znuA; zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D NF38_03025 znuB; high-affinity zinc transporter membrane component K09816 znuB; zinc transport system permease protein
D NF38_03020 znuC; zinc ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NF38_03580 iron-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D NF38_03590 membrane protein K11605 sitC; manganese/iron transport system permease protein
D NF38_03595 iron ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D NF38_03585 iron ABC transporter permease K11607 sitB; manganese/iron transport system ATP-binding protein
D NF38_07910 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D NF38_07905 ABC transporter permease K02008 cbiQ; cobalt/nickel transport system permease protein
D NF38_07900 cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D NF38_07920 membrane protein K10094 cbiK; nickel transport protein
D NF38_07915 hypothetical protein K16915 cbiL; nickel transport protein
D NF38_07545 lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D NF38_07580 permease K09808 lolC_E; lipoprotein-releasing system permease protein
D NF38_07550 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NF38_08650 hemagglutination activity protein K02196 ccmD; heme exporter protein D
D NF38_08655 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D NF38_08660 heme ABC transporter permease K02194 ccmB; heme exporter protein B
D NF38_08665 heme ABC transporter ATP-binding protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NF38_05705 lipopolysaccharide ABC transporter permease K07091 lptF; lipopolysaccharide export system permease protein
D NF38_05710 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D NF38_08395 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NF38_01095 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NF38_01100 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NF38_05175 lipid transporter ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NF38_08835 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D NF38_08355 amino acid ABC transporter permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D NF38_08350 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D NF38_05305 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:hih02060]
D NF38_05665 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D NF38_05660 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr
D NF38_05670 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NF38_02825 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D NF38_02835 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D NF38_02830 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D NF38_08400 phosphotransferase K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:hih03070]
D NF38_04200 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NF38_04205 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NF38_01550 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NF38_02845 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NF38_00955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NF38_04195 membrane protein K03210 yajC; preprotein translocase subunit YajC
D NF38_08975 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NF38_00430 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NF38_01105 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NF38_01230 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D NF38_04925 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NF38_04495 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA
D NF38_04490 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D NF38_04485 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D NF38_07775 HMW2B, OMP-85 required for HMW1A and HMW2A secretion K11017 shlB; hemolysin activation/secretion protein
D NF38_05835 HMW2B, OMP-85 required for HMW1A and HMW2A secretion K11017 shlB; hemolysin activation/secretion protein
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hih02020]
D NF38_06710 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NF38_06715 chemotaxis protein CheY K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NF38_06735 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NF38_00755 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D NF38_05690 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D NF38_05685 transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D NF38_04320 ATPase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D NF38_00555 TorR family transcriptional regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D NF38_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D NF38_05360 citrate (pro-3S)-lyase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D NF38_05365 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D NF38_05370 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D NF38_05375 citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D NF38_05380 2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52]
D NF38_04655 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D NF38_01220 C4-dicarboxylate ABC transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D NF38_04065 ATPase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D NF38_01310 nitrate/nitrite response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D NF38_00765 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NF38_00770 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NF38_00775 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C
D NF38_00780 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D
D NF38_00875 carbon storage regulator K03563 csrA; carbon storage regulator
D NF38_05630 glnD; protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D NF38_03695 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D NF38_00610 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NF38_01075 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D NF38_01080 acetate CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D NF38_01085 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_00175 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NF38_08740 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NF38_08745 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hih02024]
D NF38_02605 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D NF38_03005 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D NF38_06755 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NF38_06760 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NF38_07540 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NF38_05690 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D NF38_05685 transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D NF38_03105 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_05480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_00175 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NF38_04370 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NF38_00245 ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NF38_08505 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NF38_08510 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D NF38_08515 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D NF38_08520 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D NF38_08525 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D NF38_04365 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NF38_08975 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NF38_01550 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NF38_02845 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NF38_00955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NF38_04195 membrane protein K03210 yajC; preprotein translocase subunit YajC
D NF38_00430 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NF38_01105 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NF38_01230 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D NF38_04925 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hih02030]
D NF38_02545 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D NF38_00830 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D NF38_00680 peptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:hih02040]
D NF38_08710 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NF38_02410 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D NF38_00305 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hih01501]
D NF38_03630 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NF38_00165 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NF38_08505 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NF38_08510 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D NF38_08515 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D NF38_08520 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D NF38_08525 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D NF38_00505 TetR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D NF38_00500 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D NF38_00495 transporter K18138 acrB; multidrug efflux pump
D NF38_02870 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NF38_05325 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NF38_08475 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:hih01502]
D NF38_08435 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NF38_07670 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NF38_08465 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NF38_08460 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NF38_08445 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hih01503]
D NF38_08035 membrane protein K19239 sapZ; predicted membrane protein
D NF38_08010 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D NF38_08015 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D NF38_08020 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein
D NF38_08025 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D NF38_08030 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D NF38_00755 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D NF38_05145 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NF38_08070 hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NF38_00715 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NF38_00500 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D NF38_00495 transporter K18138 acrB; multidrug efflux pump
D NF38_08800 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hih01000]
C 01001 Protein kinases [BR:hih01001]
D NF38_06710 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NF38_05690 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D NF38_04320 ATPase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D NF38_04065 ATPase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:hih01009]
D NF38_00060 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NF38_04955 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D NF38_07320 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D NF38_08915 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:hih01002]
D NF38_08955 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D NF38_03890 peptidase A24 K02506 hofD; leader peptidase HopD [EC:3.4.23.43]
D NF38_04280 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NF38_05970 endopeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D NF38_07355 endopeptidase K13695 nlpC; probable lipoprotein NlpC
D NF38_08110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NF38_02925 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NF38_05900 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D NF38_07870 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NF38_04355 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D NF38_06645 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D NF38_05700 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NF38_00600 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D NF38_04965 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NF38_06545 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D NF38_01755 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D NF38_02155 peptidase M20 K12940 abgA; aminobenzoyl-glutamate utilization protein A
D NF38_03015 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D NF38_05625 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NF38_00860 proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D NF38_07210 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NF38_01530 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D NF38_00385 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D NF38_04440 mepA; murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D NF38_06180 serine peptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D NF38_00240 peptidase K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D NF38_00020 peptidase K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D NF38_04165 S-adenosylmethionine tRNA ribosyltransferase K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D NF38_05340 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NF38_03570 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D NF38_07230 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NF38_01560 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NF38_02750 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D NF38_07265 peptidase K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D NF38_01205 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D NF38_05410 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NF38_05895 carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NF38_07510 protease K04773 sppA; protease IV [EC:3.4.21.-]
D NF38_05815 peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D NF38_02145 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D NF38_01375 peptidase S54 K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D NF38_02585 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D NF38_02965 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D NF38_08375 protein PmbA K03592 pmbA; PmbA protein
D NF38_05965 protein TldD K03568 tldD; TldD protein
D NF38_04670 protein HflC K04087 hflC; modulator of FtsH protease HflC
D NF38_04665 membrane protease HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:hih01003]
D NF38_05730 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase K00785 lst; N-acetyllactosaminide alpha-2,3-sialyltransferase [EC:2.4.3.6]
D NF38_06605 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D NF38_00785 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NF38_05610 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NF38_02870 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NF38_05635 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hih01005]
D NF38_08800 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NF38_08805 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NF38_08415 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NF38_00400 lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NF38_01270 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D NF38_05180 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D NF38_07450 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NF38_04430 lauroyl acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D NF38_01865 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D NF38_04100 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D NF38_07590 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D NF38_05185 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D NF38_05845 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D NF38_05850 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D NF38_01860 glycosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D NF38_08585 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D NF38_04095 glycosyl transferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D NF38_08240 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D NF38_01350 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D NF38_07445 heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D NF38_08555 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D NF38_05635 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hih01011]
D NF38_08705 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NF38_04060 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NF38_08440 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NF38_08455 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NF38_08470 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NF38_08435 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NF38_07670 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NF38_05510 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D NF38_08460 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NF38_08445 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NF38_00140 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NF38_02870 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NF38_05610 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NF38_05325 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NF38_08475 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NF38_05340 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NF38_07230 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NF38_03570 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D NF38_00785 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NF38_05900 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D NF38_04440 mepA; murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D NF38_05970 endopeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D NF38_03015 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D NF38_00795 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NF38_04835 murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D NF38_01150 mltC; murein transglycosylase K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D NF38_04230 murein transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D NF38_02775 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D NF38_05335 RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NF38_05145 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NF38_03870 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hih01004]
D NF38_04640 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NF38_04635 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NF38_07480 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NF38_04645 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NF38_07260 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D NF38_08795 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NF38_05570 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NF38_05095 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D NF38_00805 acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D NF38_03105 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_05480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_01210 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NF38_04070 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NF38_01275 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:hih01006]
D NF38_07080 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NF38_00570 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NF38_00375 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NF38_05135 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NF38_02520 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:hih01007]
D NF38_04025 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NF38_06575 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NF38_07850 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NF38_01965 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NF38_05090 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NF38_07705 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NF38_06240 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NF38_00150 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NF38_06785 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NF38_00370 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NF38_08090 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NF38_03790 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NF38_07415 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NF38_03545 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NF38_00330 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NF38_00350 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NF38_04900 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NF38_01290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NF38_06640 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NF38_00870 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NF38_07370 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NF38_07365 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NF38_07895 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D NF38_03950 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NF38_08310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_02705 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NF38_07570 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NF38_08570 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NF38_00215 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D NF38_07575 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NF38_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NF38_08305 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hih00194]
D NF38_02670 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NF38_02665 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NF38_02660 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NF38_02655 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NF38_02650 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NF38_02645 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NF38_02640 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NF38_02635 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NF38_02630 ATP F0F1 synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hih03000]
D NF38_06795 XRE family transcriptional regulator K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_03205 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_06675 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_08830 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D NF38_08175 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NF38_01725 transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D NF38_05545 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D NF38_02225 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D NF38_08145 cysB; CysB family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D NF38_01370 transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D NF38_01390 DeoR faimly transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D NF38_00835 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NF38_08580 XylR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NF38_02535 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NF38_07995 transcriptional regulator K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D NF38_02940 fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D NF38_05205 GntR family transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D NF38_00505 TetR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D NF38_00185 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D NF38_02230 GntR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D NF38_02265 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D NF38_07755 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NF38_04270 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NF38_03905 transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D NF38_04475 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NF38_00175 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NF38_07000 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D NF38_03495 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D NF38_04290 acetyl-COA carboxylase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NF38_00070 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NF38_00790 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D NF38_01130 ribosylnicotinamide kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D NF38_05005 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D NF38_05755 transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D NF38_03900 transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D NF38_08100 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D NF38_03600 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D NF38_03010 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D NF38_02765 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D NF38_03850 hypothetical protein K07735 algH; putative transcriptional regulator
D NF38_05165 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D NF38_00250 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D NF38_06945 DNA-binding protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D NF38_08490 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hih03021]
D NF38_00930 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NF38_02500 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NF38_02505 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NF38_05495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NF38_02410 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D NF38_02030 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NF38_07175 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NF38_04055 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D NF38_01385 ATP-dependent helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D NF38_06435 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NF38_07405 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D NF38_01545 nusG; transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D NF38_07095 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D NF38_07090 starvation protein B K03600 sspB; stringent starvation protein B
D NF38_02025 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D NF38_02020 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D NF38_00695 hypothetical protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D NF38_05165 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D NF38_07225 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D NF38_02235 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D NF38_03895 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:hih03019]
D NF38_02995 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NF38_06570 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D NF38_05415 double-stranded RNA-binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NF38_00640 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NF38_05650 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D NF38_00510 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D NF38_04235 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NF38_01295 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NF38_00305 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NF38_04245 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NF38_03895 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NF38_00060 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NF38_06080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NF38_02360 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NF38_03005 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D NF38_05160 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D NF38_00465 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NF38_00875 carbon storage regulator K03563 csrA; carbon storage regulator
D NF38_02525 regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D NF38_01645 RNase E inhibitor protein K09893 rraB; regulator of ribonuclease activity B
D NF38_08405 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D NF38_08760 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:hih03011]
D NF38_06000 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NF38_00410 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NF38_01030 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NF38_00935 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NF38_00970 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NF38_02340 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NF38_02175 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NF38_00985 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NF38_07100 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NF38_01065 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NF38_00940 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NF38_02170 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NF38_00945 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NF38_00990 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NF38_07245 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NF38_04405 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NF38_01015 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NF38_02350 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NF38_01040 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NF38_00135 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NF38_02420 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NF38_02495 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NF38_01045 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NF38_01060 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NF38_01055 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NF38_00995 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NF38_00980 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NF38_02355 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NF38_01950 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NF38_02490 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NF38_01945 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NF38_07105 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NF38_01005 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NF38_00960 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NF38_01025 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NF38_00925 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NF38_00975 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NF38_04420 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NF38_07285 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NF38_00575 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NF38_01035 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NF38_01050 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NF38_01000 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NF38_00580 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NF38_00205 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NF38_01020 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NF38_00965 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NF38_01165 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NF38_04630 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NF38_00210 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NF38_08990 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NF38_07290 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NF38_00950 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NF38_07955 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D NF38_01485 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_01325 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_02075 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_01490 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_05540 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_04310 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_04880 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_01510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04865 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_05520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_02090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_01345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04305 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_04875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_05535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_01330 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_01495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_02080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hih03009]
D NF38_05415 double-stranded RNA-binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NF38_05650 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D NF38_05420 GTPase Era K03595 era; GTPase
D NF38_00590 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D NF38_05165 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D NF38_06435 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NF38_07405 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D NF38_01545 nusG; transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D NF38_06110 16S rRNA pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D NF38_02330 ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NF38_02050 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NF38_05425 MFS transporter K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D NF38_01110 16S rRNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NF38_03855 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NF38_02625 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NF38_08485 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NF38_05960 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NF38_00700 DNA polymerase I K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D NF38_00645 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NF38_07215 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D NF38_05320 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D NF38_02865 ribosomal RNA large subunit methyltransferase J K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D NF38_04845 rlmL; 23S rRNA methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D NF38_08170 ribosomal RNA large subunit methyltransferase M K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D NF38_03565 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NF38_03715 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D NF38_00170 rumB; 23S rRNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D NF38_01380 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NF38_05275 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NF38_08150 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NF38_03000 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D NF38_04550 rluD; 23S rRNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NF38_01670 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D NF38_02950 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D NF38_05435 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D NF38_07470 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D NF38_04410 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D NF38_06215 ribosomal protein S12 methylthiotransferase accessory factor YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D NF38_00080 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D NF38_08140 50S ribosomal protein L30 K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D NF38_03075 ribosomal oxygenase K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D NF38_02995 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NF38_06570 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D NF38_03845 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D NF38_04235 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NF38_02960 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D NF38_05655 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NF38_04750 GTP-binding protein Der K03977 engA; GTPase
D NF38_01840 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NF38_05500 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NF38_06465 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D NF38_06430 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D NF38_05315 ribosome-associated protein IOJAP K09710 ybeB; ribosome-associated protein
D NF38_05470 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor
D NF38_07220 RNA-binding protein K07574 yhbY; RNA-binding protein
D NF38_08380 hypothetical protein K09889 yjgA; ribosome-associated protein
D NF38_04120 ribosome-associated inhibitor A K05809 raiA; ribosome-associated inhibitor A
D NF38_03090 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
D NF38_04625 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:hih03016]
D NF38_02445 ribonuclease HI K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D NF38_07830 cca; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D NF38_04025 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NF38_01290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NF38_00150 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NF38_00370 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NF38_06240 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NF38_06575 glutamate--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NF38_07705 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NF38_08090 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NF38_03790 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NF38_00870 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NF38_07415 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NF38_06640 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NF38_04900 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NF38_05090 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NF38_06785 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NF38_03545 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NF38_07370 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NF38_07365 pheT; phenylalanine--tRNA ligase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NF38_07850 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NF38_01965 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NF38_01780 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D NF38_00155 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NF38_03680 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D NF38_02515 tRNA (adenine(37)-N6)-methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D NF38_08040 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D NF38_06470 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D NF38_01640 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D NF38_03500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NF38_01840 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NF38_05135 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NF38_08970 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D NF38_02165 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NF38_04425 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D NF38_02285 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NF38_08985 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D NF38_09010 bacterial RNase P K01978 rnpB; M1 RNA
D NF38_03760 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D NF38_04035 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D NF38_05575 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D NF38_03100 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NF38_06160 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D NF38_00330 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NF38_00350 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NF38_07045 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D NF38_00445 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D NF38_01975 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D NF38_00075 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D NF38_05390 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D NF38_03780 tRNA methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D NF38_06560 tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D NF38_00705 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D NF38_04415 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D NF38_02950 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D NF38_03490 tRNA (cytidine/uridine-2'-O-)-methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D NF38_01115 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D NF38_02955 tRNA (adenine-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D NF38_07060 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D NF38_01380 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NF38_05275 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NF38_04560 mnmA; tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NF38_06665 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D NF38_01525 sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D NF38_04190 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D NF38_02190 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D NF38_02195 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D NF38_02200 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D NF38_06660 sulfur transfer protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D NF38_03510 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D NF38_02730 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D NF38_07485 FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D NF38_04175 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D NF38_08190 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NF38_08195 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D NF38_08200 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NF38_06480 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NF38_00565 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D NF38_04180 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D NF38_07070 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D NF38_03035 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D NF38_06170 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D NF38_03115 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D NF38_02425 tRNA threonylcarbamoyladenosine biosynthesis protein Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D NF38_05150 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D NF38_04830 sulfur acceptor protein CsdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D NF38_00640 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NF38_04245 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NF38_00225 plasmid maintenance protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D NF38_03770 ribonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:hih03012]
D NF38_06025 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D NF38_06440 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NF38_07295 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NF38_01830 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D NF38_00405 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D NF38_01990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NF38_02185 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NF38_02180 fusA; elongation factor G K02355 fusA; elongation factor G
D NF38_01590 translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D NF38_07610 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D NF38_00900 ribosome-recycling factor K02838 frr; ribosome recycling factor
D NF38_07600 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D NF38_03085 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D NF38_02335 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D NF38_03740 elongation factor P K02356 efp; elongation factor P
D NF38_00760 elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D NF38_03735 lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D NF38_07630 ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D NF38_08085 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D NF38_05565 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:hih03110]
D NF38_00650 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D NF38_01555 clpX; Clp protease ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D NF38_02580 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D NF38_04955 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D NF38_06080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NF38_03525 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D NF38_02360 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NF38_06085 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NF38_04045 molecular chaperone DnaJ K05801 djlA; DnaJ like chaperone protein
D NF38_03515 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D NF38_00890 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D NF38_05115 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D NF38_02270 ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D NF38_02365 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D NF38_07210 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NF38_02635 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NF38_01230 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D NF38_08870 Tat proofreading chaperone DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D NF38_05085 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D NF38_08965 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D NF38_02210 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D NF38_01650 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D NF38_02770 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D NF38_05070 thioredoxin K03671 TXN; thioredoxin
D NF38_08340 hypothetical protein K05838 ybbN; putative thioredoxin
D NF38_07475 glutaredoxin K03674 grxA; glutaredoxin 1
D NF38_08315 glutaredoxin K07390 grxD; monothiol glutaredoxin
D NF38_08070 hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NF38_00715 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NF38_02930 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D NF38_08080 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D NF38_00550 thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D NF38_00290 thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D NF38_08635 thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:hih04131]
D NF38_00595 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NF38_05485 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NF38_01170 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NF38_07660 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NF38_04955 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:hih04121]
C 03051 Proteasome [BR:hih03051]
D NF38_04955 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:hih03032]
D NF38_04730 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NF38_06795 XRE family transcriptional regulator K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_03205 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_06675 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_02920 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D NF38_07360 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NF38_06005 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NF38_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D NF38_07665 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NF38_02415 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NF38_04155 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_03230 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_01240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NF38_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NF38_06805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NF38_00360 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NF38_02790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NF38_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NF38_06045 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NF38_05430 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NF38_08810 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NF38_00665 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NF38_08610 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NF38_04380 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NF38_04460 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication
D NF38_06030 DNA replication initiation factor K10763 hda; DnaA-homolog protein
D NF38_06205 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NF38_02245 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NF38_07460 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NF38_07455 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NF38_06630 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NF38_02850 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hih03036]
D NF38_06795 XRE family transcriptional regulator K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_03205 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_06675 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_05415 double-stranded RNA-binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NF38_07725 DNA-binding protein H-NS-like protein K03746 hns; DNA-binding protein H-NS
D NF38_02920 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D NF38_07360 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NF38_06005 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NF38_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D NF38_05945 hypothetical protein K12961 diaA; DnaA initiator-associating protein
D NF38_06550 DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D NF38_00070 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NF38_03005 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D NF38_07755 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NF38_04270 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NF38_00745 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D NF38_06690 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB
D NF38_06685 condesin subunit E K03804 mukE; chromosome partition protein MukE
D NF38_06670 condesin subunit F K03633 mukF; chromosome partition protein MukF
D NF38_08425 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D NF38_01765 cell division protein FtsB K05589 ftsB; cell division protein FtsB
D NF38_01100 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NF38_08475 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NF38_07750 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D NF38_08480 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D NF38_00490 hypothetical protein K03591 ftsN; cell division protein FtsN
D NF38_08430 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D NF38_08450 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D NF38_01095 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NF38_08420 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NF38_08605 cell division protein ZipA K03528 zipA; cell division protein ZipA
D NF38_00660 cell division protein ZapA K09888 zapA; cell division protein ZapA
D NF38_01790 cell division protein ZapB K09892 zapB; cell division protein ZapB
D NF38_05145 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NF38_00500 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D NF38_00185 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D NF38_04460 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication
D NF38_05300 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NF38_05295 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D NF38_05290 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D NF38_05330 cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA
D NF38_07460 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NF38_07455 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NF38_02165 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NF38_02625 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NF38_01750 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D NF38_03825 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D NF38_06245 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NF38_08535 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:hih03400]
D NF38_03045 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D NF38_05395 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D NF38_01160 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NF38_05780 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NF38_00425 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NF38_00190 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NF38_01855 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NF38_00235 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NF38_05280 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NF38_08075 ssDNA exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NF38_08610 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NF38_00665 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NF38_04160 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D NF38_06130 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D NF38_05190 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D NF38_08210 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NF38_02500 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NF38_02505 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NF38_00930 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NF38_05495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NF38_06175 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NF38_01605 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NF38_05140 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D NF38_03040 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D NF38_06705 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D NF38_03070 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NF38_07075 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NF38_01240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NF38_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NF38_06805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NF38_00360 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NF38_02790 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NF38_04735 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NF38_06045 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NF38_05430 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D NF38_04155 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_03230 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_04380 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NF38_07280 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D NF38_00255 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D NF38_07275 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D NF38_02100 recombinase RecA K03553 recA; recombination protein RecA
D NF38_03810 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NF38_03815 ruvB; ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NF38_03805 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NF38_03685 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NF38_02345 primosomal replication protein N K02686 priB; primosomal replication protein N
D NF38_03750 primosomal replication protein N K04067 priC; primosomal replication protein N''
D NF38_07760 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D NF38_00015 DNA replication protein RecF K03629 recF; DNA replication and repair protein RecF
D NF38_04940 ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NF38_05505 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NF38_03720 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NF38_02855 recR; recombination protein RecR K06187 recR; recombination protein RecR
D NF38_05125 recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D NF38_03840 recombinase RdgC K03554 rdgC; recombination associated protein RdgC
D NF38_03220 recombinase RdgC K03554 rdgC; recombination associated protein RdgC
D NF38_06205 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NF38_02245 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NF38_06630 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NF38_02920 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D NF38_00070 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NF38_07360 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NF38_06005 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NF38_01295 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NF38_07725 DNA-binding protein H-NS-like protein K03746 hns; DNA-binding protein H-NS
D NF38_01205 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D NF38_02105 RecX family transcriptional regulator K03565 recX; regulatory protein
D NF38_01880 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D NF38_03120 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D NF38_05935 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NF38_05930 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:hih03029]
D NF38_06440 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NF38_07295 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NF38_00405 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D NF38_01990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NF38_02185 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NF38_02180 fusA; elongation factor G K02355 fusA; elongation factor G
D NF38_05420 GTPase Era K03595 era; GTPase
D NF38_07850 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NF38_00370 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NF38_03790 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NF38_07705 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NF38_04155 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_03230 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NF38_00390 peptidase K07277 SAM50; outer membrane protein insertion porin family
D NF38_06080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NF38_05115 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D NF38_02360 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NF38_02365 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D NF38_06085 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NF38_03500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NF38_03515 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D NF38_08315 glutaredoxin K07390 grxD; monothiol glutaredoxin
D NF38_06245 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NF38_08975 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NF38_04955 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hih02000]
D NF38_05175 lipid transporter ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NF38_08835 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D NF38_08355 amino acid ABC transporter permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D NF38_08350 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D NF38_01805 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D NF38_05305 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D NF38_06520 ABC transporter ATPase K15738 uup; ABC transport system ATP-binding/permease protein
D NF38_05760 molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NF38_05765 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D NF38_05770 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NF38_04985 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NF38_04980 Fe3+ dicitrate ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D NF38_04975 peptide ABC transporter substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NF38_08940 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D NF38_08935 thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein
D NF38_08930 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D NF38_02575 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NF38_06525 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D NF38_06530 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D NF38_06535 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D NF38_06540 potA; putrescine/spermidine ABC transporter ATPase K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D NF38_03605 thiamine biosynthesis protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D NF38_03610 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D NF38_03615 phosphonate ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D NF38_00830 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D NF38_00820 mglC; beta-methylgalactoside transporter permease K10541 mglC; methyl-galactoside transport system permease protein
D NF38_00825 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D NF38_02545 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D NF38_02550 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D NF38_02555 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D NF38_08685 toluene ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NF38_08680 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NF38_08675 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NF38_08690 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D NF38_08695 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D NF38_06735 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D NF38_06730 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D NF38_06725 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D NF38_06720 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NF38_08250 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D NF38_08260 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D NF38_08255 ABC transporter K09999 artQ; arginine transport system permease protein
D NF38_08245 arginine ABC transporter ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D NF38_08710 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NF38_08715 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D NF38_08720 amino acid ABC transporter ATPase K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D NF38_01365 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D NF38_01360 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D NF38_01355 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D NF38_08505 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D NF38_08510 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D NF38_08515 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D NF38_08520 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D NF38_08525 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D NF38_00680 peptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D NF38_08215 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D NF38_08220 peptide transporter K12370 dppC; dipeptide transport system permease protein
D NF38_08225 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D NF38_08230 dppF; peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D NF38_08010 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D NF38_08015 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D NF38_08020 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein
D NF38_08025 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D NF38_08030 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D NF38_04365 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NF38_04825 znuA; zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D NF38_03025 znuB; high-affinity zinc transporter membrane component K09816 znuB; zinc transport system permease protein
D NF38_03020 znuC; zinc ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NF38_03580 iron-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D NF38_03590 membrane protein K11605 sitC; manganese/iron transport system permease protein
D NF38_03595 iron ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D NF38_03585 iron ABC transporter permease K11607 sitB; manganese/iron transport system ATP-binding protein
D NF38_07905 ABC transporter permease K02008 cbiQ; cobalt/nickel transport system permease protein
D NF38_07910 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D NF38_07900 cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D NF38_07920 membrane protein K10094 cbiK; nickel transport protein
D NF38_07915 hypothetical protein K16915 cbiL; nickel transport protein
D NF38_05705 lipopolysaccharide ABC transporter permease K07091 lptF; lipopolysaccharide export system permease protein
D NF38_05710 lipopolysaccharide ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D NF38_08395 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NF38_07545 lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D NF38_07580 permease K09808 lolC_E; lipoprotein-releasing system permease protein
D NF38_07550 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NF38_08650 hemagglutination activity protein K02196 ccmD; heme exporter protein D
D NF38_08655 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D NF38_08660 heme ABC transporter permease K02194 ccmB; heme exporter protein B
D NF38_08665 heme ABC transporter ATP-binding protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NF38_01095 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NF38_01100 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NF38_01435 transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D NF38_07860 multidrug transporter MatE K26939 norM; MATE family, multidrug efflux pump
D NF38_01415 major facilitator transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D NF38_03830 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D NF38_01700 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D NF38_03630 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NF38_06105 bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D NF38_04755 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D NF38_00485 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D NF38_05665 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D NF38_05660 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr
D NF38_02825 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D NF38_05670 PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D NF38_02835 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D NF38_08400 phosphotransferase K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D NF38_01690 glycerol uptake facilitator GlpF K02440 glpF; glycerol uptake facilitator
D NF38_04895 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NF38_07095 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D NF38_05265 membrane protein K19416 yccA; modulator of FtsH protease
D NF38_04525 formate transporter K06212 focA; formate transporter
D NF38_02040 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D NF38_04450 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel
D NF38_04140 energy transducer TonB K03561 exbB; biopolymer transport protein ExbB
D NF38_04145 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D NF38_03130 colicin uptake protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D NF38_03135 colicin uptake protein TolR K03560 tolR; biopolymer transport protein TolR
D NF38_08905 magnesium transporter CorA K03284 corA; magnesium transporter
D NF38_02110 chromosome condensation protein CrcB K06199 crcB; fluoride exporter
D NF38_08845 membrane protein K08363 merT; mercuric ion transport protein
D NF38_08840 hypothetical protein K08364 merP; periplasmic mercuric ion binding protein
D NF38_02805 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NF38_04920 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NF38_08320 membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D NF38_03050 membrane protein K06076 fadL; long-chain fatty acid transport protein
D NF38_02785 autotransporter K12678 aidA-I; autotransporter family porin
D NF38_00020 peptidase K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D NF38_04165 S-adenosylmethionine tRNA ribosyltransferase K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D NF38_09005 ligand-gated channel K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NF38_08060 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NF38_04885 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NF38_04090 ligand-gated channel K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NF38_02135 ligand-gated channel protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NF38_00390 peptidase K07277 SAM50; outer membrane protein insertion porin family
D NF38_04125 outer membrane protein assembly factor BamC-like protein K07287 bamC; outer membrane protein assembly factor BamC
D NF38_04545 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D NF38_00750 membrane protein SmpA K06186 bamE; outer membrane protein assembly factor BamE
D NF38_01655 membrane protein K07278 tamA; translocation and assembly module TamA
D NF38_01660 tubulin-binding protein K09800 tamB; translocation and assembly module TamB
D NF38_07180 hypothetical protein K19233 btaF; ECM component-binding autotransporter adhesin
D NF38_08390 ABC transporter substrate-binding protein K09774 lptA; lipopolysaccharide export system protein LptA
D NF38_08385 sugar transporter K11719 lptC; lipopolysaccharide export system protein LptC
D NF38_01285 LPS biosynthesis protein K04744 lptD; LPS-assembly protein
D NF38_00365 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D NF38_03865 magnesium transporter K06189 corC; hemolysin (HlyC) family protein
D NF38_06505 membrane protein K06518 cidA; holin-like protein
D NF38_00495 transporter K18138 acrB; multidrug efflux pump
D NF38_01730 permease K05786 rarD; chloramphenicol-sensitive protein RarD
D NF38_04275 transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D NF38_03755 sodium:proton antiporter K07084 yuiF; putative amino acid transporter
D NF38_05010 gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D NF38_04655 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D NF38_01220 C4-dicarboxylate ABC transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D NF38_08055 lactate permease K03303 lutP; lactate permease
D NF38_05695 transporter K02168 betT; choline/glycine/proline betaine transport protein
D NF38_02510 tellurite resistance protein TehA K03304 tehA; tellurite resistance protein
D NF38_00090 panF; sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter
D NF38_06565 proline:sodium symporter PutP K11928 putP; sodium/proline symporter
D NF38_07530 serine/threonine protein kinase K07862 sstT; serine/threonine transporter
D NF38_07465 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D NF38_04265 nhaA; pH-dependent sodium/proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D NF38_02935 nhaB; sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D NF38_08575 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D NF38_07720 hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D NF38_00420 potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D NF38_01515 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D NF38_02045 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D NF38_06035 uracil transporter K02824 uraA; uracil permease
D NF38_04775 permase K06901 pbuG; adenine/guanine/hypoxanthine permease
D NF38_02435 tyrosine transporter K03834 tyrP; tyrosine-specific transport protein
D NF38_02675 tyrosine transporter K03834 tyrP; tyrosine-specific transport protein
D NF38_01610 TnaB K03835 mtr; tryptophan-specific transport protein
D NF38_03945 tryptophan permease K03835 mtr; tryptophan-specific transport protein
D NF38_03935 serine transporter K03837 sdaC; serine transporter
D NF38_05225 L-dehydroascorbate transporter large permease subunit K21393 yiaN; TRAP-type transport system large permease protein
D NF38_05220 C4-dicarboxylate ABC transporter permease K21394 yiaM; TRAP-type transport system small permease protein
D NF38_05215 hypothetical protein K21395 yiaO; TRAP-type transport system periplasmic protein
D NF38_04690 sialic acid-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D NF38_02150 C4-dicarboxylate ABC transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D NF38_00140 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NF38_07390 membrane protein K05835 rhtC; threonine efflux protein
D NF38_05550 branched-chain amino acid transporter AzlC K26605 azlC; branched chain amino acid efflux pump
D NF38_05555 branched-chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump
D NF38_04210 permase K03548 perM; putative permease
D NF38_00630 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D NF38_08450 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D NF38_06140 cobalt transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D NF38_04150 energy transducer TonB K03832 tonB; periplasmic protein TonB
D NF38_03150 membrane protein K03640 pal; peptidoglycan-associated lipoprotein
D NF38_03140 cell envelope biogenesis protein TolA K03646 tolA; colicin import membrane protein
D NF38_03145 translocation protein TolB K03641 tolB; TolB protein
D NF38_07155 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D NF38_08855 dimethyl sulfoxide reductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D NF38_08860 dimethyl sulfoxide reductase K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D NF38_08865 dimethyl sulfoxide reductase K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D NF38_01910 nitrate reductase K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D NF38_01915 trimethylamine N-oxide reductase I catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D NF38_00480 multidrug transporter K03543 emrA; membrane fusion protein, multidrug efflux system
D NF38_00500 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D NF38_08725 nicotinamide riboside transporter pnuC K03811 pnuC; nicotinamide mononucleotide transporter
D NF38_08640 cytochrome C biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D NF38_01895 membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:hih02044]
D NF38_03560 hypothetical protein K02656 pilF; type IV pilus assembly protein PilF
D NF38_00275 hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A
D NF38_00270 hypothetical protein K02680 ppdB; prepilin peptidase dependent protein B
D NF38_00260 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C
D NF38_03875 prepilin peptidase K02682 ppdD; prepilin peptidase dependent protein D
D NF38_03880 protein transporter HofB K02504 hofB; protein transport protein HofB
D NF38_03885 type II secretion system protein F K02505 hofC; protein transport protein HofC
D NF38_02895 secretin K02507 hofQ; protein transport protein HofQ
D NF38_08900 membrane protein K02221 yggT; YggT family protein
D NF38_08945 competence protein ComE K02237 comEA; competence protein ComEA
D NF38_05170 recombinase K02238 comEC; competence protein ComEC
D NF38_08080 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D NF38_02785 autotransporter K12678 aidA-I; autotransporter family porin
D NF38_00020 peptidase K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D NF38_04165 S-adenosylmethionine tRNA ribosyltransferase K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D NF38_07775 HMW2B, OMP-85 required for HMW1A and HMW2A secretion K11017 shlB; hemolysin activation/secretion protein
D NF38_05835 HMW2B, OMP-85 required for HMW1A and HMW2A secretion K11017 shlB; hemolysin activation/secretion protein
D NF38_00430 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NF38_01230 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D NF38_04200 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NF38_01550 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NF38_04205 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NF38_02845 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NF38_00955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NF38_04925 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NF38_01105 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NF38_04195 membrane protein K03210 yajC; preprotein translocase subunit YajC
D NF38_08975 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NF38_04495 tatA; preprotein translocase subunit SecA K03116 tatA; sec-independent protein translocase protein TatA
D NF38_04490 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D NF38_04485 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hih02042]
D NF38_02805 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NF38_04920 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NF38_07775 HMW2B, OMP-85 required for HMW1A and HMW2A secretion K11017 shlB; hemolysin activation/secretion protein
D NF38_05835 HMW2B, OMP-85 required for HMW1A and HMW2A secretion K11017 shlB; hemolysin activation/secretion protein
C 02022 Two-component system [BR:hih02022]
D NF38_06710 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NF38_06715 chemotaxis protein CheY K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NF38_00755 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D NF38_05690 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D NF38_05685 transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D NF38_04320 ATPase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D NF38_00555 TorR family transcriptional regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D NF38_04065 ATPase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D NF38_01310 nitrate/nitrite response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
C 02035 Bacterial motility proteins [BR:hih02035]
D NF38_08710 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D NF38_03560 hypothetical protein K02656 pilF; type IV pilus assembly protein PilF
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hih04812]
D NF38_05300 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NF38_08420 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NF38_08425 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
C 04147 Exosome [BR:hih04147]
D NF38_04955 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D NF38_00305 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NF38_05485 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NF38_02450 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NF38_07660 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NF38_04805 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D NF38_02360 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NF38_06080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NF38_07675 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NF38_04285 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NF38_01990 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NF38_02185 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NF38_00155 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NF38_03105 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_05480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NF38_01090 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NF38_03635 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NF38_06050 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NF38_00885 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NF38_05600 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NF38_08045 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NF38_00845 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D NF38_06590 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NF38_01685 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NF38_00610 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NF38_02735 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NF38_00540 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NF38_06055 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NF38_02290 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NF38_01740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NF38_01170 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:hih02048]
D NF38_04930 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D NF38_06445 restriction endonuclease HindVIIP subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D NF38_04330 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D NF38_04935 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D NF38_06455 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D NF38_04345 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D NF38_04945 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D NF38_04350 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D NF38_04380 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NF38_06795 XRE family transcriptional regulator K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_03205 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_06675 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NF38_08820 type III restriction-modification system HindVIP enzyme res K01156 res; type III restriction enzyme [EC:3.1.21.5]
D NF38_08815 restriction endonuclease subunit M K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D NF38_01575 toxin RelE K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D NF38_01580 antitoxin K07473 dinJ; DNA-damage-inducible protein J
D NF38_06150 hypothetical protein K07334 higB-1; toxin HigB-1
D NF38_06155 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1
D NF38_00225 plasmid maintenance protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D NF38_03770 ribonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D NF38_00220 antitoxin K18829 mvpT; antitoxin VapB
D NF38_03775 antitoxin K18829 mvpT; antitoxin VapB
D NF38_08420 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NF38_05300 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NF38_07460 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NF38_07455 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NF38_04025 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NF38_02035 hypothetical protein K09159 cptB; antitoxin CptB
D NF38_03500 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:hih04090]
C 01504 Antimicrobial resistance genes [BR:hih01504]
D NF38_07720 hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D NF38_00500 membrane protein K03585 acrA; membrane fusion protein, multidrug efflux system
D NF38_00495 transporter K18138 acrB; multidrug efflux pump
D NF38_03905 transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hih00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hih03100]
D NF38_04030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NF38_01335 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NF38_01500 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NF38_05530 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NF38_01420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NF38_01925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NF38_01930 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NF38_04850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NF38_01140 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NF38_06135 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NF38_01480 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NF38_04740 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NF38_04745 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NF38_05050 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NF38_07960 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NF38_07965 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NF38_02085 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NF38_04870 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NF38_04300 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NF38_04795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_05640 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_05055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_05645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_02000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NF38_04855 tRNA-His K14226 tRNA-His; tRNA His
D NF38_01340 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NF38_01505 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NF38_05525 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NF38_02840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_04790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_05045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_06995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_07970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NF38_03155 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NF38_04785 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NF38_05040 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NF38_03160 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NF38_04840 tRNA-Met K14230 tRNA-Met; tRNA Met
D NF38_06425 tRNA-Met K14230 tRNA-Met; tRNA Met
D NF38_00355 tRNA-Met K14230 tRNA-Met; tRNA Met
D NF38_07975 tRNA-Met K14230 tRNA-Met; tRNA Met
D NF38_01145 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NF38_01425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NF38_04860 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NF38_03745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NF38_05260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NF38_01920 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NF38_04115 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NF38_01995 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NF38_02010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NF38_03335 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NF38_01475 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NF38_02005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NF38_04005 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_04020 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_04015 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_04010 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_07655 tRNA-Val K14237 tRNA-Val; tRNA Val
D NF38_01600 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D NF38_01510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04865 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_05520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_02090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_01345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NF38_04305 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_04875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_05535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_01330 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_01495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_02080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NF38_01485 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_01325 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_02075 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_01490 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_05540 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_04310 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_04880 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NF38_09010 bacterial RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D NF38_01890 NADPH quinone reductase MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D NF38_06635 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D NF38_07160 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D NF38_04135 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NF38_01195 tpx; peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NF38_06740 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D NF38_06745 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D NF38_04215 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D NF38_08360 ribonucleoside-triphosphate reductase K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D NF38_04535 pflA; pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D NF38_02475 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D NF38_06235 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D NF38_03860 acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D NF38_00455 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D NF38_04570 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D NF38_05130 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D NF38_03125 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D NF38_06830 S-adenosylmethionine tRNA ribosyltransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D NF38_07195 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D NF38_05910 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NF38_02795 DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NF38_05075 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NF38_06500 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D NF38_04465 acyl-CoA esterase K01175 ybfF; esterase [EC:3.1.-.-]
D NF38_06300 glycoside hydrolase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D NF38_03345 glycoside hydrolase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D NF38_02060 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NF38_01535 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D NF38_07765 hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D NF38_06495 cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D NF38_04680 N-acetylneuraminic acid mutarotase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D NF38_01405 fucose isomerase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D NF38_04815 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D NF38_08235 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D NF38_05795 rnfD; electron transporter RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D NF38_05800 electron transporter RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D NF38_05805 electron transporter RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D NF38_04600 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D NF38_04595 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D NF38_04590 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D NF38_04585 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D NF38_04580 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D NF38_04575 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D NF38_07855 transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D NF38_05465 formate dehydrogenase K02379 fdhD; FdhD protein
D NF38_03530 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D NF38_07380 (2Fe-2S)-binding protein K11107 yfaE; ferredoxin
D NF38_05790 electron transporter RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D NF38_05785 elongation factor G K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D NF38_05810 electron transporter RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D NF38_01785 mioC K06205 mioC; MioC protein
D NF38_03505 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D NF38_03665 nitrate reductase K02570 napD; periplasmic nitrate reductase NapD
D NF38_03670 ferredoxin K02572 napF; ferredoxin-type protein NapF
D NF38_00285 cytochrome C biogenesis protein CcmF K04016 nrfE; cytochrome c-type biogenesis protein NrfE
D NF38_04470 flavodoxin FldA K03839 fldA; flavodoxin I
D NF38_03640 cytochrome C K02569 napC; cytochrome c-type protein NapC
D NF38_03655 quinol dehydrogenase K02573 napG; ferredoxin-type protein NapG
D NF38_03650 napH; quinol dehydrogenase K02574 napH; ferredoxin-type protein NapH
D NF38_08770 cysteine dioxygenase K04013 nrfB; cytochrome c-type protein NrfB
D NF38_08775 nitrite reductase K04014 nrfC; protein NrfC
D NF38_08780 nitrite reductase K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D NF38_08600 sulfate transport protein CysZ K06203 cysZ; CysZ protein
D NF38_05020 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D NF38_06010 membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D NF38_06015 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D NF38_01120 lipooligosaccharide biosynthesis protein lpsA K07270 K07270; glycosyl transferase, family 25
D NF38_01185 UDP-glucose--lipooligosaccharide glucosyltransferase K07270 K07270; glycosyl transferase, family 25
D NF38_05740 Lsg locus protein 4 K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D NF38_01465 heme biosynthesis protein HemY K02498 hemY; HemY protein
D NF38_00690 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D NF38_01280 cell division protein FtsQ K04753 sufI; suppressor of ftsI
C 99999 Others
D NF38_00545 hypothetical protein K15977 K15977; putative oxidoreductase
D NF38_07810 membrane protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D NF38_07050 cold-shock protein K03704 cspA; cold shock protein
D NF38_02240 transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D NF38_01565 trigger factor K03545 tig; trigger factor
D NF38_05440 formate dehydrogenase K02380 fdhE; FdhE protein
D NF38_02385 urease accessory protein UreE K03187 ureE; urease accessory protein
D NF38_02390 urease accessory protein UreF K03188 ureF; urease accessory protein
D NF38_02395 urease accessory protein UreG K03189 ureG; urease accessory protein
D NF38_02400 urease accessory protein UreD K03190 ureD; urease accessory protein
D NF38_00065 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D NF38_06780 hydrogenase K04653 hypC; hydrogenase expression/formation protein HypC
D NF38_08540 ATP-dependent protease K07391 comM; magnesium chelatase family protein
D NF38_02905 amino acid ABC transporter substrate-binding protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D NF38_00200 hypothetical protein K03630 radC; DNA repair protein RadC
D NF38_02565 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC
D NF38_05950 hypothetical protein K07460 yraN; putative endonuclease
D NF38_00045 DNA repair protein Smf K04096 smf; DNA processing protein
D NF38_06860 hypothetical protein K07474 xtmA; phage terminase small subunit
D NF38_06855 hypothetical protein K06909 xtmB; phage terminase large subunit
D NF38_07740 recombination factor protein RarA K07478 ycaJ; putative ATPase
D NF38_01835 hypothetical protein K07479 yrdD; putative DNA topoisomerase
D NF38_04890 hypothetical protein K07483 K07483; transposase
D NF38_02600 acid phosphatase K07483 K07483; transposase
D NF38_02305 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D NF38_02860 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D NF38_07820 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D NF38_01260 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D NF38_05775 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D NF38_00560 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D NF38_04515 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D NF38_04260 branched-chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D NF38_02480 nucleoside transporter NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D NF38_05385 membrane protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D NF38_05310 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D NF38_00810 septation protein A K06190 ispZ; intracellular septation protein
D NF38_05855 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D NF38_01175 hypothetical protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D NF38_02095 DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D NF38_05890 prop expression regulator K03607 proQ; ProP effector
D NF38_00865 Universal stress protein A K06149 uspA; universal stress protein A
D NF38_07005 universal stress protein UspE K14055 uspE; universal stress protein E
D NF38_00620 GTP-binding protein TypA K06207 typA; GTP-binding protein
D NF38_07825 hypothetical protein K07184 ygiM; SH3 domain protein
D NF38_08910 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D NF38_07745 lolA; lipoprotein chaperone K03634 lolA; outer membrane lipoprotein carrier protein
D NF38_07835 membrane protein K02494 lolB; outer membrane lipoprotein LolB
D NF38_01540 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D NF38_07690 membrane protein K06077 slyB; outer membrane lipoprotein SlyB
D NF38_00395 membrane protein K06142 hlpA; outer membrane protein
D NF38_01620 membrane protein K06194 nlpD; lipoprotein NlpD
D NF38_04240 lipoprotein NlpI-like protein K05803 nlpI; lipoprotein NlpI
D NF38_03730 Opacity-associated protein OapA K07268 oapA; opacity associated protein
D NF38_08995 chromosomal replication initiation protein K07280 K07280; outer membrane protein
D NF38_03110 membrane protein K07285 slp; outer membrane lipoprotein
D NF38_04610 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D NF38_03690 membrane protein K11744 tqsA; AI-2 transport protein TqsA
D NF38_08645 cytochrome C biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D NF38_00295 nitrite reductase K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NF38_08630 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NF38_08625 TPR-repeat-containing protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NF38_03555 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D NF38_01300 frataxin K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D NF38_08115 colicin V synthesis protein K03558 cvpA; membrane protein required for colicin V production
D NF38_06880 hypothetical protein K03791 K03791; putative chitinase
D NF38_05400 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D NF38_05620 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D NF38_03995 membrane protein K07058 K07058; membrane protein
D NF38_06490 hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D NF38_01960 lysogenization regulator K07153 hflD; high frequency lysogenization protein
D NF38_02215 protein SlyX-like protein K03745 slyX; SlyX protein
D NF38_08275 sprT K02742 sprT; SprT protein
D NF38_06195 membrane protein K03748 sanA; SanA protein
D NF38_05885 membrane protein K03808 pqiA; paraquat-inducible protein A
D NF38_02300 hypothetical protein K08987 K08987; putative membrane protein
D NF38_05270 membrane protein K08990 ycjF; putative membrane protein
D NF38_03990 preprotein translocase subunit SecA K09858 K09858; SEC-C motif domain protein
D NF38_01470 phosphate-starvation-inducible PsiE K13256 psiE; protein PsiE
D NF38_05250 hypothetical protein K06193 phnA; protein PhnA
D NF38_04325 membrane protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D NF38_06370 baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D NF38_08005 hypothetical protein K06918 K06918; uncharacterized protein
D NF38_08365 L-cystine transporter tcyP K06956 K06956; uncharacterized protein
D NF38_00735 membrane protein K07014 K07014; uncharacterized protein
D NF38_08105 epimerase K07071 K07071; uncharacterized protein
D NF38_00460 hypothetical protein K07090 K07090; uncharacterized protein
D NF38_00910 membrane protein K07090 K07090; uncharacterized protein
D NF38_04435 hypothetical protein K07090 K07090; uncharacterized protein
D NF38_05255 hypothetical protein K07109 K07109; uncharacterized protein
D NF38_05955 penicillin-binding protein K07121 K07121; uncharacterized protein
D NF38_07615 hypothetical protein K07126 K07126; uncharacterized protein
D NF38_07620 hypothetical protein K07126 K07126; uncharacterized protein
D NF38_07625 hypothetical protein K07126 K07126; uncharacterized protein
D NF38_07930 hypothetical protein K07126 K07126; uncharacterized protein
D NF38_08890 hypothetical protein K07133 K07133; uncharacterized protein
D NF38_02465 membrane protein K07149 K07149; uncharacterized protein
D NF38_08980 membrane protein K08998 K08998; uncharacterized protein
D NF38_05345 hypothetical protein K09158 K09158; uncharacterized protein
D NF38_06580 hypothetical protein K09160 K09160; uncharacterized protein
D NF38_00800 hypothetical protein K09780 K09780; uncharacterized protein
D NF38_04360 membrane protein K09790 K09790; uncharacterized protein
D NF38_01180 hypothetical protein K09798 K09798; uncharacterized protein
D NF38_03080 protein RnfH K09801 K09801; uncharacterized protein
D NF38_08300 hypothetical protein K09802 K09802; uncharacterized protein
D NF38_08530 membrane protein K09824 virK; uncharacterized protein
D NF38_02755 membrane protein K09824 virK; uncharacterized protein
D NF38_04565 hypothetical protein K05952 K05952; uncharacterized protein
D NF38_00050 hypothetical protein K09861 K09861; uncharacterized protein
D NF38_00515 DNA gyrase inhibitor K09862 K09862; uncharacterized protein
D NF38_02915 hypothetical protein K09891 K09891; uncharacterized protein
D NF38_01320 aminotransferase K09894 K09894; uncharacterized protein
D NF38_00855 hypothetical protein K09895 K09895; uncharacterized protein
D NF38_00720 hypothetical protein K09896 K09896; uncharacterized protein
D NF38_00710 hypothetical protein K09897 K09897; uncharacterized protein
D NF38_00180 hypothetical protein K09898 K09898; uncharacterized protein
D NF38_08120 membrane protein K09899 K09899; uncharacterized protein
D NF38_07140 hypothetical protein K09901 K09901; uncharacterized protein
D NF38_07120 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D NF38_00740 hypothetical protein K09904 K09904; uncharacterized protein
D NF38_07700 hypothetical protein K09907 K09907; uncharacterized protein
D NF38_07945 hypothetical protein K09908 K09908; uncharacterized protein
D NF38_05820 hypothetical protein K09909 K09909; uncharacterized protein
D NF38_05615 hypothetical protein K09910 K09910; uncharacterized protein
D NF38_07270 Ter macrodomain organizer matS-binding protein K09911 K09911; uncharacterized protein
D NF38_07055 hypothetical protein K09917 K09917; uncharacterized protein
D NF38_03675 hypothetical protein K09923 K09923; uncharacterized protein
D NF38_07795 hypothetical protein K09929 K09929; uncharacterized protein
D NF38_07800 hypothetical protein K09930 K09930; uncharacterized protein
D NF38_06850 hypothetical protein K09961 K09961; uncharacterized protein
D NF38_07815 phosphate transport regulator K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 28, 2024