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Transcription Machinery - Helobdella robusta
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E HELRODRAFT_103917 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E HELRODRAFT_158265 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E HELRODRAFT_86723 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E HELRODRAFT_193523 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E HELRODRAFT_102505 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E HELRODRAFT_72376 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E HELRODRAFT_158187 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E HELRODRAFT_97005 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E HELRODRAFT_85938 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E HELRODRAFT_86044 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E HELRODRAFT_163066 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E HELRODRAFT_91608 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E HELRODRAFT_173679 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E HELRODRAFT_104718 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E HELRODRAFT_157577 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
D Pol I, II, III common subunits
E HELRODRAFT_185710 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E HELRODRAFT_65246 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E HELRODRAFT_86309 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E HELRODRAFT_165578 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E HELRODRAFT_154955 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E HELRODRAFT_63271 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E HELRODRAFT_74285 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E HELRODRAFT_92790 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E HELRODRAFT_185403 hypothetical protein K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E HELRODRAFT_64912 hypothetical protein K03123 TFIIA2; transcription initiation factor TFIIA small subunit
E HELRODRAFT_73469 hypothetical protein K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E HELRODRAFT_80977 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
E HELRODRAFT_174017 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
E HELRODRAFT_185984 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E HELRODRAFT_188693 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E HELRODRAFT_86082 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E HELRODRAFT_194117 hypothetical protein K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
E HELRODRAFT_191453 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2
E HELRODRAFT_191983 hypothetical protein K03129 TAF4; transcription initiation factor TFIID subunit 4
E HELRODRAFT_189288 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E HELRODRAFT_188931 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E HELRODRAFT_93424 hypothetical protein K03131 TAF6; transcription initiation factor TFIID subunit 6
E HELRODRAFT_191659 hypothetical protein K03132 TAF7; transcription initiation factor TFIID subunit 7
E HELRODRAFT_171464 hypothetical protein K14649 TAF8; transcription initiation factor TFIID subunit 8
E HELRODRAFT_175703 hypothetical protein K14535 TAF9; transcription initiation factor TFIID subunit 9
E HELRODRAFT_69115 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E HELRODRAFT_108569 hypothetical protein K03135 TAF11; transcription initiation factor TFIID subunit 11
E HELRODRAFT_159763 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E HELRODRAFT_89477 hypothetical protein K03127 TAF13; transcription initiation factor TFIID subunit 13
D TFIIE
E HELRODRAFT_90493 hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E HELRODRAFT_73187 hypothetical protein K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E HELRODRAFT_184964 hypothetical protein K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E HELRODRAFT_78102 hypothetical protein K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E HELRODRAFT_102185 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E HELRODRAFT_185095 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E HELRODRAFT_185480 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E HELRODRAFT_69505 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E HELRODRAFT_155693 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E HELRODRAFT_105484 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E HELRODRAFT_80663 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E HELRODRAFT_94730 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E HELRODRAFT_186265 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E HELRODRAFT_90768 hypothetical protein K06634 CCNH; cyclin H
C Mediator complex
D Head
E HELRODRAFT_100409 hypothetical protein K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E HELRODRAFT_185934 hypothetical protein K15129 MED8; mediator of RNA polymerase II transcription subunit 8
E HELRODRAFT_68624 hypothetical protein K15131 MED11; mediator of RNA polymerase II transcription subunit 11
E HELRODRAFT_97598 hypothetical protein K15133 MED17; mediator of RNA polymerase II transcription subunit 17
E HELRODRAFT_76268 hypothetical protein K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E HELRODRAFT_188804 hypothetical protein K15137 MED19; mediator of RNA polymerase II transcription subunit 19
E HELRODRAFT_63878 hypothetical protein K13528 MED20; mediator of RNA polymerase II transcription subunit 20
E HELRODRAFT_155811 hypothetical protein K15139 MED22; mediator of RNA polymerase II transcription subunit 22
E HELRODRAFT_176735 hypothetical protein K15141 MED28; mediator of RNA polymerase II transcription subunit 28
E HELRODRAFT_66432 hypothetical protein K15142 MED29; mediator of RNA polymerase II transcription subunit 29
E HELRODRAFT_164180 hypothetical protein K15143 MED30; mediator of RNA polymerase II transcription subunit 30
D Middle
E HELRODRAFT_105051 hypothetical protein K15146 MED4; mediator of RNA polymerase II transcription subunit 4
E HELRODRAFT_194643 hypothetical protein K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E HELRODRAFT_72187 hypothetical protein K15149 MED9; mediator of RNA polymerase II transcription subunit 9
E HELRODRAFT_85402 hypothetical protein K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E HELRODRAFT_192580 hypothetical protein K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E HELRODRAFT_105060 hypothetical protein K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E HELRODRAFT_193588 hypothetical protein K15156 MED14; mediator of RNA polymerase II transcription subunit 14
E HELRODRAFT_185989 hypothetical protein K15157 MED15; mediator of RNA polymerase II transcription subunit 15
D CDK-module
E HELRODRAFT_83659 hypothetical protein K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E HELRODRAFT_190619 hypothetical protein K15161 CCNC; cyclin-C
E HELRODRAFT_105468 hypothetical protein K15162 MED12; mediator of RNA polymerase II transcription subunit 12
E HELRODRAFT_180782 hypothetical protein K15164 MED13; mediator of RNA polymerase II transcription subunit 13
D Other mediators
E HELRODRAFT_105252 hypothetical protein K15168 MED25; mediator of RNA polymerase II transcription subunit 25
E HELRODRAFT_186141 hypothetical protein K15170 MED27; mediator of RNA polymerase II transcription subunit 27
C Coactivators
D SAGA/TFTC/STAGA complex
E HELRODRAFT_77335 hypothetical protein K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E HELRODRAFT_67491 hypothetical protein K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E HELRODRAFT_194551 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein
E HELRODRAFT_174915 hypothetical protein K11313 SUPT3H; transcription initiation protein SPT3
E HELRODRAFT_65773 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha
E HELRODRAFT_194579 hypothetical protein K15127 TADA2B; transcriptional adapter 2-beta
E HELRODRAFT_173784 hypothetical protein K15127 TADA2B; transcriptional adapter 2-beta
E HELRODRAFT_191296 hypothetical protein K11315 TADA3; transcriptional adapter 3
E HELRODRAFT_185117 hypothetical protein K11317 TADA1; transcriptional adapter 1
E HELRODRAFT_191453 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2
E HELRODRAFT_191983 hypothetical protein K03129 TAF4; transcription initiation factor TFIID subunit 4
E HELRODRAFT_189288 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E HELRODRAFT_188931 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E HELRODRAFT_93424 hypothetical protein K03131 TAF6; transcription initiation factor TFIID subunit 6
E HELRODRAFT_191659 hypothetical protein K03132 TAF7; transcription initiation factor TFIID subunit 7
E HELRODRAFT_175703 hypothetical protein K14535 TAF9; transcription initiation factor TFIID subunit 9
E HELRODRAFT_69115 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10
E HELRODRAFT_159763 hypothetical protein K03126 TAF12; transcription initiation factor TFIID subunit 12
E HELRODRAFT_66532 hypothetical protein K11363 SGF11; SAGA-associated factor 11
E HELRODRAFT_185770 hypothetical protein K11363 SGF11; SAGA-associated factor 11
E HELRODRAFT_186194 hypothetical protein K11364 SGF29; SAGA-associated factor 29
E HELRODRAFT_181843 hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor
E HELRODRAFT_113992 hypothetical protein K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E HELRODRAFT_100012 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E HELRODRAFT_185604 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E HELRODRAFT_193880 hypothetical protein K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E HELRODRAFT_67796 hypothetical protein K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E HELRODRAFT_188630 hypothetical protein K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
E HELRODRAFT_155129 hypothetical protein K05692 ACTB_G1; actin beta/gamma 1
E HELRODRAFT_185075 hypothetical protein K05692 ACTB_G1; actin beta/gamma 1
E HELRODRAFT_185105 hypothetical protein K05692 ACTB_G1; actin beta/gamma 1
E HELRODRAFT_185110 hypothetical protein K05692 ACTB_G1; actin beta/gamma 1
E HELRODRAFT_189158 hypothetical protein K05692 ACTB_G1; actin beta/gamma 1
E HELRODRAFT_96235 hypothetical protein K05692 ACTB_G1; actin beta/gamma 1
E HELRODRAFT_155789 hypothetical protein K11652 ACTL6B; actin-like protein 6B
E HELRODRAFT_194900 hypothetical protein K11757 PBRM1; protein polybromo-1
D SWI/SNF complex
E HELRODRAFT_185604 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
E HELRODRAFT_82145 hypothetical protein K03145 TFIIS; transcription elongation factor S-II
E HELRODRAFT_98648 hypothetical protein K03145 TFIIS; transcription elongation factor S-II
E HELRODRAFT_155753 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E HELRODRAFT_192720 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
E HELRODRAFT_191379 hypothetical protein K11292 SUPT6H; transcription elongation factor SPT6
E HELRODRAFT_161252 hypothetical protein K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E HELRODRAFT_95427 hypothetical protein K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-]
E HELRODRAFT_179365 hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E HELRODRAFT_103603 hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E HELRODRAFT_101329 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E HELRODRAFT_166542 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E HELRODRAFT_110458 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E HELRODRAFT_156455 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E HELRODRAFT_186595 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E HELRODRAFT_97791 hypothetical protein K06100 SYMPK; symplekin
E HELRODRAFT_168763 hypothetical protein K06100 SYMPK; symplekin
E HELRODRAFT_75246 hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E HELRODRAFT_169832 hypothetical protein K14845 RAI1; RAT1-interacting protein
E HELRODRAFT_84234 hypothetical protein K15559 RTT103; regulator of Ty1 transposition protein 103
E HELRODRAFT_191370 hypothetical protein K13219 SFPQ; splicing factor, proline- and glutamine-rich
D PAF1 complex
E HELRODRAFT_93221 hypothetical protein K15174 PAF1; RNA polymerase II-associated factor 1
E HELRODRAFT_102643 hypothetical protein K15175 CDC73; parafibromin
E HELRODRAFT_84028 hypothetical protein K15176 CTR9; RNA polymerase-associated protein CTR9
E HELRODRAFT_172774 hypothetical protein K15177 LEO1; RNA polymerase-associated protein LEO1
E HELRODRAFT_194108 hypothetical protein K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
E HELRODRAFT_193204 hypothetical protein K15179 WHSC2; negative elongation factor A
E HELRODRAFT_193409 hypothetical protein K15180 COBRA1; negative elongation factor B
E HELRODRAFT_157967 hypothetical protein K15181 TH1L; negative elongation factor C/D
E HELRODRAFT_191815 hypothetical protein K15182 RDBP; negative elongation factor E
D Super elongation complex (SEC)
E HELRODRAFT_178766 hypothetical protein K15187 MLLT1_3; YEATS domain-containing protein 1/3
E HELRODRAFT_192123 hypothetical protein K15187 MLLT1_3; YEATS domain-containing protein 1/3
E HELRODRAFT_176487 hypothetical protein K15187 MLLT1_3; YEATS domain-containing protein 1/3
E HELRODRAFT_176525 hypothetical protein K15187 MLLT1_3; YEATS domain-containing protein 1/3
E HELRODRAFT_176543 hypothetical protein K15187 MLLT1_3; YEATS domain-containing protein 1/3
E HELRODRAFT_176701 hypothetical protein K15187 MLLT1_3; YEATS domain-containing protein 1/3
E HELRODRAFT_87291 hypothetical protein K15188 CCNT; cyclin T
E HELRODRAFT_108190 hypothetical protein K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
E HELRODRAFT_187748 hypothetical protein K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
E HELRODRAFT_87291 hypothetical protein K15188 CCNT; cyclin T
E HELRODRAFT_108190 hypothetical protein K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
E HELRODRAFT_187748 hypothetical protein K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
E HELRODRAFT_189289 hypothetical protein K15189 HEXIM1_2; protein HEXIM1/2
E HELRODRAFT_110926 hypothetical protein K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
E HELRODRAFT_111074 hypothetical protein K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
E HELRODRAFT_87291 hypothetical protein K15188 CCNT; cyclin T
E HELRODRAFT_108190 hypothetical protein K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
E HELRODRAFT_187748 hypothetical protein K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D DBIRD complex
D Others
E HELRODRAFT_191999 hypothetical protein K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E HELRODRAFT_192000 hypothetical protein K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E HELRODRAFT_155148 hypothetical protein K21751 DR1; down-regulator of transcription 1
E HELRODRAFT_135743 hypothetical protein K21752 DRAP1; Dr1-associated corepressor
E HELRODRAFT_127015 hypothetical protein K21752 DRAP1; Dr1-associated corepressor
E HELRODRAFT_89315 hypothetical protein K21752 DRAP1; Dr1-associated corepressor
E HELRODRAFT_162417 hypothetical protein K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E HELRODRAFT_122772 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E HELRODRAFT_166405 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E HELRODRAFT_77608 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E HELRODRAFT_165535 hypothetical protein K17498 SPN1; transcription factor SPN1
E HELRODRAFT_143271 hypothetical protein K17498 SPN1; transcription factor SPN1
E HELRODRAFT_82651 hypothetical protein K17498 SPN1; transcription factor SPN1
E HELRODRAFT_82441 hypothetical protein K17498 SPN1; transcription factor SPN1
E HELRODRAFT_83644 hypothetical protein K17498 SPN1; transcription factor SPN1
E HELRODRAFT_87445 hypothetical protein K17498 SPN1; transcription factor SPN1
E HELRODRAFT_87508 hypothetical protein K17498 SPN1; transcription factor SPN1
E HELRODRAFT_169025 hypothetical protein K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E HELRODRAFT_171372 hypothetical protein K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E HELRODRAFT_190714 hypothetical protein K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E HELRODRAFT_137972 hypothetical protein K12412 MCM1; pheromone receptor transcription factor
E HELRODRAFT_107709 hypothetical protein K23326 CCNK; cyclin K
E HELRODRAFT_68968 hypothetical protein K23326 CCNK; cyclin K
E HELRODRAFT_69993 hypothetical protein K24104 GPN; GPN-loop GTPase
E HELRODRAFT_179416 hypothetical protein K24104 GPN; GPN-loop GTPase
E HELRODRAFT_67088 hypothetical protein K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E HELRODRAFT_106408 hypothetical protein K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E HELRODRAFT_77058 hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E HELRODRAFT_193474 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E HELRODRAFT_193781 hypothetical protein K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E HELRODRAFT_164567 hypothetical protein K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E HELRODRAFT_183654 hypothetical protein K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E HELRODRAFT_184881 hypothetical protein K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E HELRODRAFT_171655 hypothetical protein K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E HELRODRAFT_112966 hypothetical protein K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E HELRODRAFT_146448 hypothetical protein K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E HELRODRAFT_171157 hypothetical protein K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E HELRODRAFT_184869 hypothetical protein K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E HELRODRAFT_185710 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E HELRODRAFT_65246 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E HELRODRAFT_86309 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E HELRODRAFT_165578 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E HELRODRAFT_154955 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E HELRODRAFT_63271 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E HELRODRAFT_74285 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E HELRODRAFT_92790 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E HELRODRAFT_168687 hypothetical protein K09191 GTF3A; general transcription factor IIIA
E HELRODRAFT_71126 hypothetical protein K09191 GTF3A; general transcription factor IIIA
E HELRODRAFT_133378 hypothetical protein K09191 GTF3A; general transcription factor IIIA
E HELRODRAFT_71423 hypothetical protein K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E HELRODRAFT_188693 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E HELRODRAFT_86082 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E HELRODRAFT_193467 hypothetical protein K15196 BRF1; transcription factor IIIB 90 kDa subunit
D TFIIIC
E HELRODRAFT_120372 hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E HELRODRAFT_189301 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
D TFIIIC, fungi type
E HELRODRAFT_189301 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E HELRODRAFT_120372 hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E HELRODRAFT_174802 hypothetical protein K15211 SNAPC5; snRNA-activating protein complex subunit 5
D Octamer transcription factors
E HELRODRAFT_188329 hypothetical protein K09364 POU2F; POU domain transcription factor, class 2
D Others
E HELRODRAFT_166724 hypothetical protein K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E HELRODRAFT_77058 hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E HELRODRAFT_193474 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E HELRODRAFT_164358 hypothetical protein K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E HELRODRAFT_176847 hypothetical protein K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
E HELRODRAFT_73994 hypothetical protein K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
D Pol I, II, III common subunits
E HELRODRAFT_185710 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E HELRODRAFT_65246 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E HELRODRAFT_86309 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E HELRODRAFT_165578 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E HELRODRAFT_154955 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E HELRODRAFT_63271 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E HELRODRAFT_74285 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E HELRODRAFT_92790 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E HELRODRAFT_188693 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E HELRODRAFT_86082 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E HELRODRAFT_188039 hypothetical protein K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A
C Other transcription-related factors
D UBF
E HELRODRAFT_89270 hypothetical protein K09273 UBTF; upstream-binding transcription factor
D Transcription initiation factors
E HELRODRAFT_187961 hypothetical protein K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
E HELRODRAFT_189144 hypothetical protein K15223 UAF30; upstream activation factor subunit UAF30
D Transcription elongation factors
E HELRODRAFT_155753 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E HELRODRAFT_192720 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E HELRODRAFT_101736 hypothetical protein K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E HELRODRAFT_80977 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
E HELRODRAFT_174017 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
E HELRODRAFT_185984 hypothetical protein K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E HELRODRAFT_90493 hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024