+D
#
Transfer RNA Biogenesis - Klebsiella pneumoniae subsp. rhinoscleromatis SB3432
%
!
AEukaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D KPR_2041 rbnZ; highly similar to ribonuclease Z from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TBW1) K00784 rnz; ribonuclease Z [EC:3.1.26.11]
C CCA adding factors
D KPR_4492 cca; highly similar to tRNA CCA-pyrophosphorylase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TE35) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
C tRNA import factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D KPR_1956 gltX; highly similar to glutamyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TC43) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KPR_1140 proS; highly similar to prolyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T4Z7) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KPR_0954 ileS; highly similar to isoleucyl-tRNA synthetase from Klebsiella pneumoniae strain 342 (sp|B5Y235) K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KPR_3901 leuS; highly similar to leucyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T6A3) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KPR_1539 metG; highly similar to methionyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TBK7) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KPR_3878 glnS; highly similar to glutaminyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T6C3) K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D KPR_3301 argS; highly similar to arginyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TB43) K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KPR_4059 lysS; highly similar to lysyl-tRNA synthetase from Salmonella arizonae (sp|A9MRI4) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KPR_4585 lysS; highly similar to lysyl-tRNA synthetase from Salmonella arizonae (sp|A9MRI4) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KPR_3293 aspS; highly similar to aspartyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TB35|) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
C Other AARSs
D KPR_1261 alaS; highly similar to alanyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCV9) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KPR_0961 unnamed protein product; similar to alanyl-tRNA synthetase-related protein from Citrobacter youngae ATCC 29220 (tr|D4BF16) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KPR_3621 asnS; highly similar to asparaginyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T726) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D KPR_2728 thrS; highly similar to threonyl-tRNA synthetase from Klebsiella pneumoniae strain 342 (sp|B5XQC6) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KPR_3412 thrS; similar to threonyl-tRNA synthetase from Pseudomonas fluorescens (sp|C3JZN7) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KPR_3653 serS; highly similar to seryl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T6Z0) K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KPR_3424 unnamed protein product; N-terminal similar to N-terminal region of cysteinyl-tRNA synthetase from Shewanella loihica (sp|A3QFX9) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KPR_3428 unnamed protein product; similar to C-terminal region of cysteinyl-tRNA synthetase from Salmonella typhimurium (sp|Q8ZR68) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KPR_4237 cysS; highly similar to cysteinyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T5R2) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KPR_0640 valS; highly similar to putative valyl-tRNA synthetase from Escherichia coli strain UTI89 - UPEC (tr|Q1R2Z6) K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KPR_1432 hisS; highly similar to histidyl-tRNA synthetase from Klebsiella pneumoniae strain 342 (sp|B5XNL6) K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KPR_2724 pheS; highly similar to phenylalanyl-tRNA synthetase alpha chain from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TAI3) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KPR_2723 pheT; highly similar to phenylalanyl-tRNA synthetase beta chain from Escherichia coli O157:H7 (sp|Q8XE32) K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KPR_3014 tyrS; highly similar to tyrosyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T9Y5) K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KPR_0715 trpS; highly similar to tryptophanyl-tRNA synthetase from Klebsiella aerogenes (sp|Q9EYY6) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KPR_0814 trpS2; highly similar to probable tryptophanyl-tRNA synthetase from Salmonella gallinarum (tr|B5R9P6) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D KPR_0143 dtd; highly similar to D-tyrosyl-tRNA(Tyr) deacylase from Klebsiella pneumoniae subsp pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG77) K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
D KPR_2140 unnamed protein product; highly similar to HIT histidine triad hydrolase from Escherichia coli 83972 (tr|C2DSG8) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferase
C Methyltransferases
D KPR_4663 trmB; highly similar to tRNA (guanine-N(7)-)-methyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TDW8) K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D KPR_1141 yaeB; highly similar to UPF0066 protein YaeB from Escherichia coli strain K12 (sp|P28634) K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D KPR_1998 truA; highly similar to tRNA pseudouridine synthase A from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TC04) K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D KPR_4769 truB; highly similar to tRNA pseudouridine synthase B from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TEI5) K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D KPR_4104 truD; highly similar to tRNA pseudouridine synthase D from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TD37) K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D KPR_1413 iscS; highly similar to cysteine desulfurase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCF1) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Elongator complex
C Elongator related proteins
C Other tRNA modification factors
D KPR_4864 rimN; highly similar to putative ribosome maturation factor RimN from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TET6) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D KPR_0545 miaA; highly similar to tRNA Delta(2)-isopentenylpyrophosphate transferase from Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 - MGH 78578 (sp|A6TH86) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D KPR_5144 mnmE; highly similar to tRNA modification GTPase MnmE from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG09) K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D KPR_0105 mnmG; highly similar to tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG45) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D KPR_2252 selD; highly similar to selenophosphate synthase from Enterobacter sp. (sp|A4W9I2) K01008 selD; selenide, water dikinase [EC:2.7.9.3]
B tRNA degradation factors
C TRAMP complex
C Rapid tRNA decay (RTD) pathway factors
D KPR_0584 cysQ; highly similar to putative CysQ protein from Salmonella paratyphi A (tr|Q5PJ66). It belongs to Pfam inositol monophosphatase family 00459. K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
D KPR_5147 unnamed protein product; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D KPR_2041 rbnZ; highly similar to ribonuclease Z from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TBW1) K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D KPR_3031 rnt; highly similar to ribonuclease T from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TA01) K03683 rnt; ribonuclease T [EC:3.1.13.-]
D KPR_4929 rph; highly similar to ribonuclease PH from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TFN5) K00989 rph; ribonuclease PH [EC:2.7.7.56]
D KPR_3922 rna; highly similar to ribonuclease I from Escherichia coli O8 strain IAI1 (tr|B7M4U3) K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21]
D KPR_2333 rnb; highly similar to exoribonuclease 2 from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T7Z4) K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D KPR_3233 rnd; highly similar to ribonuclease D from Escherichia coli O44:H18 strain 042 - EAEC (tr|D3GVL7) K03684 rnd; ribonuclease D [EC:3.1.13.5]
C CCA adding factors
D KPR_4492 cca; highly similar to tRNA CCA-pyrophosphorylase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TE35) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
D KPR_1077 unnamed protein product; highly similar to C-terminal of 2'-5' RNA ligase from Escherichia coli O1:K1 - APEC (tr|A1A7J3) K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
B tRNA transport factors
C tRNA export factors
D KPR_0924 unnamed protein product; highly similar to ABC transporter, ATP-binding protein from Escherichia coli O44:H18 strain 042 - EAEC (tr|D3GY31) K06020 ettA; energy-dependent translational throttle protein EttA
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D KPR_3901 leuS; highly similar to leucyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T6A3) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KPR_1140 proS; highly similar to prolyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T4Z7) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D KPR_3014 tyrS; highly similar to tyrosyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T9Y5) K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KPR_0715 trpS; highly similar to tryptophanyl-tRNA synthetase from Klebsiella aerogenes (sp|Q9EYY6) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KPR_0814 trpS2; highly similar to probable tryptophanyl-tRNA synthetase from Salmonella gallinarum (tr|B5R9P6) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KPR_2728 thrS; highly similar to threonyl-tRNA synthetase from Klebsiella pneumoniae strain 342 (sp|B5XQC6) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KPR_3412 thrS; similar to threonyl-tRNA synthetase from Pseudomonas fluorescens (sp|C3JZN7) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KPR_0954 ileS; highly similar to isoleucyl-tRNA synthetase from Klebsiella pneumoniae strain 342 (sp|B5Y235) K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KPR_4059 lysS; highly similar to lysyl-tRNA synthetase from Salmonella arizonae (sp|A9MRI4) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KPR_4585 lysS; highly similar to lysyl-tRNA synthetase from Salmonella arizonae (sp|A9MRI4) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KPR_1261 alaS; highly similar to alanyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCV9) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KPR_0961 unnamed protein product; similar to alanyl-tRNA synthetase-related protein from Citrobacter youngae ATCC 29220 (tr|D4BF16) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KPR_0640 valS; highly similar to putative valyl-tRNA synthetase from Escherichia coli strain UTI89 - UPEC (tr|Q1R2Z6) K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KPR_1539 metG; highly similar to methionyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TBK7) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KPR_3653 serS; highly similar to seryl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T6Z0) K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KPR_3293 aspS; highly similar to aspartyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TB35|) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KPR_4993 glyQ; highly similar to glycyl-tRNA synthetase alpha subunit from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TFH5) K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KPR_4994 glyS; highly similar to glycyl-tRNA synthetase beta subunit from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TFH4) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KPR_3424 unnamed protein product; N-terminal similar to N-terminal region of cysteinyl-tRNA synthetase from Shewanella loihica (sp|A3QFX9) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KPR_3428 unnamed protein product; similar to C-terminal region of cysteinyl-tRNA synthetase from Salmonella typhimurium (sp|Q8ZR68) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KPR_4237 cysS; highly similar to cysteinyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T5R2) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KPR_1956 gltX; highly similar to glutamyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TC43) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KPR_3878 glnS; highly similar to glutaminyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T6C3) K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D KPR_3301 argS; highly similar to arginyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TB43) K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KPR_2724 pheS; highly similar to phenylalanyl-tRNA synthetase alpha chain from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TAI3) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KPR_2723 pheT; highly similar to phenylalanyl-tRNA synthetase beta chain from Escherichia coli O157:H7 (sp|Q8XE32) K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KPR_1432 hisS; highly similar to histidyl-tRNA synthetase from Klebsiella pneumoniae strain 342 (sp|B5XNL6) K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KPR_3621 asnS; highly similar to asparaginyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T726) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D KPR_1074 gluQ; highly similar to Glutamyl-Q tRNA(Asp)synthetase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T4T3) K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
C Trans-editing factors
D KPR_0143 dtd; highly similar to D-tyrosyl-tRNA(Tyr) deacylase from Klebsiella pneumoniae subsp pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG77) K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D KPR_4218 ybaK; highly similar to protein YbaK from Escherichia coli O6 (tr|Q8FK79) K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D KPR_2222 unnamed protein product; highly similar to putative YbaK/prolyl-tRNA synthetase-associated domain protein from Escherichia coli strain SMS-3-5 - SECEC (tr|B1LD89) K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
D KPR_1389 tadA; highly similar to putative tRNA-specific adenosine deaminase from Escherichia coli O44:H18 strain 042 - EAEC (tr|D3H3R9) K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D KPR_0418 dusA; highly similar to tRNA-dihydrouridine synthase A from Escherichia coli O6 (sp|Q8FB30) K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D KPR_4855 dusB; highly similar to tRNA-dihydrouridine synthase B from Klebsiella pneumoniae (sp|O52536) K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D KPR_1512 dusC; highly similar to tRNA-dihydrouridine synthase C from Escherichia coli O81 strain ED1a (tr|B7MXF2) K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
C Methylthiotransferases
D KPR_3887 miaB; highly similar to (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T6B5) K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
C Methyltransferases
D KPR_3297 cmoA; highly similar to tRNA (cmo5U34)-methyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TB39) K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D KPR_3298 cmoB; highly similar to tRNA (mo5U34)-methyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TB40) K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D KPR_3630 unnamed protein product; highly similar to S-adenosylmethionine-dependent methyltransferase from Escherichia coli B185 (tr|D6I8J0) K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D KPR_0935 unnamed protein product; highly similar to uncharacterized tRNA/rRNA methyltransferase LasT from Escherichia coli strain K12 (sp|P37005) K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D KPR_0213 trmA; highly similar to tRNA (uracil-5-)-methyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TGE9) K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D KPR_4663 trmB; highly similar to tRNA (guanine-N(7)-)-methyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TDW8) K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D KPR_1343 trmD; highly similar to tRNA (guanine-N(1)-)-methyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCL5) K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D KPR_5144 mnmE; highly similar to tRNA modification GTPase MnmE from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG09) K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D KPR_1369 yfiF; highly similar to hypothetical tRNA/rRNA methyltransferase YfiF from Escherichia coli O6:K15:H31 strain 536 - UPEC (tr|Q0TEQ7) K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D KPR_0358 spoU; highly similar to tRNA guanosine-2'-O-methyltransferase from Shigella flexneri (sp|P0AGJ4) K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D KPR_1411 trmJ; highly similar to tRNA (cytidine-uridine-2'-O-)-methyltransferase TrmJ from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCF3) K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D KPR_4964 trmL; highly similar to RNA methyltransferase from Escherichia coli B185 (tr|D6IFJ2) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D KPR_1141 yaeB; highly similar to UPF0066 protein YaeB from Escherichia coli strain K12 (sp|P28634) K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D KPR_1373 unnamed protein product; highly similar to tRNA (adenine-N(6)-)-methyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCI9) K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
C Psudouridine synthases
D KPR_1998 truA; highly similar to tRNA pseudouridine synthase A from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TC04) K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D KPR_4769 truB; highly similar to tRNA pseudouridine synthase B from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TEI5) K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D KPR_4143 truC; highly similar to tRNA pseudouridine synthase C from Shigella flexneri (sp|P0AA42) K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D KPR_4104 truD; highly similar to tRNA pseudouridine synthase D from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TD37) K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D KPR_0981 rluA; highly similar to ribosomal large subunit pseudouridine synthase A from Shigella flexneri (sp|P0AA38) K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D KPR_3187 unnamed protein product; highly similar to pseudouridine synthase from Yersinia bercovieri (tr|C4RYK9) K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
C Thiolation factors
D KPR_2186 mnmA; highly similar to tRNA-specific 2-thiouridylase MnmA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T7K3) K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D KPR_2893 ttcA; highly similar to tRNA 2-thiocytidine biosynthesis protein TtcA from Klebsiella pneumoniae strain 342 (sp|B5XRN3) K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D KPR_5081 tusA; highly similar to sulfurtransferase TusA from tRNA 2-thiouridine synthesizing protein A from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TF89) K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D KPR_0744 tusB; highly similar to protein TusB from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TEY1) K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D KPR_0743 tusC; highly similar to protein TusC from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TEY2) K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D KPR_0742 tusD; highly similar to sulfurtransferase TusD from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TEY3) K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D KPR_3518 tusE; highly similar to sulfurtransferase TusE from Salmonella typhimurium (sp|Q7CQS8) K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D KPR_1415 iscA; highly similar to iron-binding protein IscA from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCE9) K13628 iscA; iron-sulfur cluster assembly protein
D KPR_1413 iscS; highly similar to cysteine desulfurase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TCF1) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KPR_4593 ygfZ; highly similar to tRNA-modifying protein YgfZ from Klebsiella pneumoniae strain 342 (sp|B5XUE6) K06980 ygfZ; tRNA-modifying protein YgfZ
C KEOPS/EKC complex
C Other tRNA modification factors
D KPR_0105 mnmG; highly similar to tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TG45) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D KPR_0545 miaA; highly similar to tRNA Delta(2)-isopentenylpyrophosphate transferase from Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 - MGH 78578 (sp|A6TH86) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D KPR_0638 miaE; highly similar to putative tRNA hydroxylase from Salmonella gallinarum strain 287-91 - NCTC 13346 (tr|B5R9K9) K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D KPR_1992 mnmC; highly similar to tRNA from 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TC10) K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D KPR_4365 queA; highly similar to S-adenosylmethionine:tRNA ribosyltransferase-isomerase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T5D7) K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D KPR_4313 queC; highly similar to 7-cyano-7-deazaguanine synthase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T5I7) K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D KPR_4129 queD; highly similar to 6-carboxy-5,6,7, 8-tetrahydropterin synthase from Shigella flexneri (sp|P65872) K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D KPR_4130 ygcF; highly similar to putative uncharacterized protein YgcF from Escherichia coli O6 (tr|Q8FEH6) K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D KPR_4146 queF; highly similar to NADPH-dependent 7-cyano-7-deazaguanine reductase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TD67) K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D KPR_0540 yjeS; highly similar to putative electron transport protein YjeS from Escherichia coli O1:K1 - APEC (tr|A1AJ72) K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D KPR_p0019 unnamed protein product; highly similar to putative prophage protein from Escherichia coli O44:H18 strain 042 - EAEC (tr|D3H4E4) K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D KPR_2252 selD; highly similar to selenophosphate synthase from Enterobacter sp. (sp|A4W9I2) K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D KPR_4232 selU; highly similar to tRNA 2-selenouridine synthase from Salmonella schwarzengrund strain CVM19633 (sp|B4TMJ2) K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D KPR_4364 tgt; highly similar to queuine tRNA-ribosyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T5D8) K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D KPR_4346 thiI; highly similar to tRNA sulfurtransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6T5F6) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D KPR_1132 tilS; highly similar to tRNA(Ile)-lysidine synthase from Shigella flexneri (sp|Q7UDQ6) K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D KPR_1896 unnamed protein product; similar to putative hydrolase from Escherichia coli O17:K52:H18 strain UMN026 - ExPEC (tr|B7N656) K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D KPR_3236 yeaZ; highly similar to putative peptidase M22 glycoprotease from Escherichia coli strain ATCC 33849 - DSM 4235 - NCIB 12045 - K12 - DH1 (tr|C9QTD1) K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D KPR_4864 rimN; highly similar to putative ribosome maturation factor RimN from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TET6) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D KPR_4506 gcp; highly similar to probable O-sialoglycoprotein endopeptidase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TE46) K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D KPR_0542 unnamed protein product; highly similar to ATPase with strong ADP affinity from Escherichia coli O111:H-strain 11128 - EHEC (tr|C8UM19) K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D KPR_4177 ygdL; highly similar to uncharacterized protein YgdL from Escherichia coli strain K12 (sp|Q46927) K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
B tRNA degradation factors
C KPR_0554 rnr; highly similar to putative ribonuclease R from Escherichia coli strain SE11 (tr|B6I283) K12573 rnr; ribonuclease R [EC:3.1.13.1]
C KPR_4767 pnp; highly similar to polyribonucleotide nucleotidyltransferase from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TEI3) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024