+D GENES KO
#
KEGG Orthology (KO) - Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:kpt00010]
D VK055_4774 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D VK055_3061 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VK055_3254 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VK055_0273 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D VK055_2839 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VK055_3467 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VK055_4977 fructose bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D VK055_2206 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VK055_4128 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VK055_3463 tpiA2; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VK055_1006 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VK055_1263 gap2; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VK055_4127 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VK055_1767 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D VK055_2580 ytjC; phosphoglycerate mutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D VK055_3514 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VK055_4391 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VK055_0078 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VK055_0327 pyk2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VK055_0297 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VK055_2452 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VK055_2295 e3 binding domain protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VK055_2451 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_1056 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VK055_0858 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VK055_0526 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VK055_0254 adhE; adhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VK055_0631 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D VK055_3271 fucO2; lactaldehyde reductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0781 zinc-binding dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_2769 zinc-binding dehydrogenase family protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D VK055_3441 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D VK055_4724 putative alcohol dehydrogenase in ethanolamine utilization K04022 eutG; alcohol dehydrogenase
D VK055_0392 gluconate 2-dehydrogenase cytochrome c subunit K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D VK055_4528 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VK055_2990 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VK055_1766 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VK055_1450 histidine phosphatase super family protein K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D VK055_3292 yihX; &alpha-D-glucose-1-phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D VK055_1820 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VK055_1264 putative enzyme related to aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D VK055_0171 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VK055_3698 pckA2; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VK055_2815 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_1143 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_1223 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_1680 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4152 bglA; aryl-phospho-beta-D-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4445 gmuD2; 6-phospho-beta-glucosidase gmuD K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4462 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4946 bglH; aryl-phospho-beta-D-glucosidase BglH K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4688 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4275 gmuD; 6-phospho-beta-glucosidase gmuD K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4747 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VK055_1366 ptsG; ptsG K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VK055_0994 phosphotransferase system, EIIC family protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_0995 PTS system, glucose-like IIB component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_4463 PTS system, maltose and glucose-specific subfamily, IIC component domain protein K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:kpt00020]
D VK055_1802 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D VK055_2057 gltA2; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D VK055_1179 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D VK055_2445 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VK055_1318 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VK055_1796 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VK055_1795 sucB; dihydrolipoyllysine-residue succinyltransferase,E2 component of oxoglutarate dehydrogenase(succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_1793 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VK055_1794 sucC; succinyl-CoA synthetase, &beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VK055_1798 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VK055_1797 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VK055_1800 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VK055_1799 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VK055_2912 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VK055_2913 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VK055_2914 frdC; fumarate reductase membrane protein K00246 frdC; succinate dehydrogenase subunit C
D VK055_2915 frdD; fumarate reductase membrane protein K00247 frdD; succinate dehydrogenase subunit D
D VK055_0957 fumA2; fumarase A K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VK055_0990 fumA; fumarase A K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VK055_0988 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VK055_0329 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D VK055_3833 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VK055_0948 mqo; malate dehydrogenase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D VK055_4892 mqo2; malate dehydrogenase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D VK055_0171 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VK055_3698 pckA2; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VK055_2452 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VK055_2295 e3 binding domain protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VK055_2451 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VK055_1056 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:kpt00030]
D VK055_3061 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VK055_0081 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VK055_1755 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D VK055_2823 lactonase, 7-bladed beta-propeller family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D VK055_5026 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VK055_3713 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VK055_4125 tkt3; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1942 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1943 transketolase, pyrimidine binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1701 transketolase, pyrimidine binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1702 transketolase, thiamine diphosphate binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1336 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_4711 tkt2; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1337 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VK055_2566 tal3; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VK055_4713 tal2; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VK055_4133 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D VK055_1338 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D VK055_2594 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D VK055_3316 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D VK055_0446 pfkB carbohydrate kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D VK055_0768 pfkB carbohydrate kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D VK055_2592 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VK055_1820 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VK055_2974 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D VK055_0212 prsA; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VK055_0082 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D VK055_0083 eda; eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VK055_2437 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D VK055_3487 SMP-30/Gluconolaconase/LRE-like region family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VK055_0391 gluconate 2-dehydrogenase flavoprotein K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D VK055_0390 gluconate 2-dehydrogenase subunit 3 K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D VK055_3554 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D VK055_3669 gntK; gntK K00851 idnK; gluconokinase [EC:2.7.1.12]
D VK055_3556 pfkB carbohydrate kinase family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D VK055_3593 kdgK; ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D VK055_1198 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VK055_4977 fructose bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D VK055_2206 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VK055_4128 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VK055_2839 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VK055_3467 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VK055_3254 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VK055_0273 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:kpt00040]
D VK055_1740 pemB; pectinesterase B K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D VK055_4256 oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D VK055_4269 cupin 2, conserved barrel domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D VK055_1217 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D VK055_4258 kduD2; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D VK055_3948 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D VK055_0850 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D VK055_2633 uxaB2; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D VK055_3949 D-altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D VK055_3857 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D VK055_4917 uxuA2; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D VK055_0913 mannitol dehydrogenase Rossmann domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D VK055_3856 zinc-binding dehydrogenase family protein K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D VK055_5029 ugd; nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VK055_0250 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_5012 galF; regulatory protein GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_2300 badF/BadG/BcrA/BcrD ATPase family protein K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D VK055_2874 sgaH; 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D VK055_2873 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VK055_2872 ulaF; L-ribulose-5-phosphate 4-epimerase ulaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VK055_2514 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VK055_3713 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VK055_2513 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D VK055_2512 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D VK055_3541 xylB2; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D VK055_4984 xylB3; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D VK055_0444 xylose isomerase-like TIM barrel family protein K01805 xylA; xylose isomerase [EC:5.3.1.5]
D VK055_2722 xylA2; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D VK055_3540 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D VK055_3264 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D VK055_3266 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D VK055_4983 mannitol dehydrogenase Rossmann domain protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D VK055_4979 fggY; FGGY carbohydrate kinase domain-containing protein K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
D VK055_4980 rbtD; ribitol 2-dehydrogenase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56]
D VK055_4358 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D VK055_4357 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D VK055_4360 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:kpt00051]
D VK055_2033 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VK055_2219 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VK055_4438 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VK055_0991 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VK055_5028 manB; phosphoglucomutase/phosphomannomutase, C-terminal domain protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VK055_5027 manC; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VK055_4358 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D VK055_4357 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D VK055_4360 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D VK055_4863 rhmD; L-rhamnonate dehydratase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D VK055_4865 2-keto-3-deoxy-L-rhamnonate aldolase K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53]
D VK055_3265 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D VK055_3264 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D VK055_3266 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D VK055_3254 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VK055_0273 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D VK055_2839 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VK055_3467 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VK055_3527 mannitol dehydrogenase Rossmann domain protein K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D VK055_3067 short chain dehydrogenase family protein K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D VK055_4476 short chain dehydrogenase family protein K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D VK055_3072 zinc-binding dehydrogenase family protein K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D VK055_4923 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VK055_0444 xylose isomerase-like TIM barrel family protein K01805 xylA; xylose isomerase [EC:5.3.1.5]
D VK055_2722 xylA2; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D VK055_3540 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D VK055_4983 mannitol dehydrogenase Rossmann domain protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D VK055_4977 fructose bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D VK055_2206 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VK055_4128 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VK055_3463 tpiA2; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VK055_3970 dhaK2; dihydroxyacetone kinase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D VK055_1338 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D VK055_0750 alsE; D-allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D VK055_0751 fruA; PTS system, fructose subfamily, IIA component domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VK055_0752 frwB; frwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VK055_0753 PTS system, Fru family, IIC component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VK055_4924 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VK055_0117 manX; manX K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D VK055_0116 manY; manY K02795 manY; mannose PTS system EIIC component
D VK055_0115 manZ; manZ K02796 manZ; mannose PTS system EIID component
D VK055_0803 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VK055_3528 mtlA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VK055_4831 HAD hydrolase, IA, variant 3 family protein K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D VK055_1216 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D VK055_4986 HAD hydrolase, IA, variant 1 family protein K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D VK055_1339 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D VK055_4477 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D VK055_4478 PTS system, glucitol/sorbitol-specific, IIBC component family protein K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D VK055_4479 srlA; PTS system, glucitol/sorbitol-specific, IIC component family protein K02783 srlA; glucitol/sorbitol PTS system EIIC component
D VK055_3068 PTS system, mannose/fructose/sorbose family, IIAcomponent domain protein K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D VK055_3069 manX2; manX K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D VK055_3070 manY2; manY K02814 sorA; sorbose PTS system EIIC component
D VK055_3071 manZ2; manZ K02815 sorM; sorbose PTS system EIID component
C 00052 Galactose metabolism [PATH:kpt00052]
D VK055_1766 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VK055_1765 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VK055_1764 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VK055_1763 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VK055_0250 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_5012 galF; regulatory protein GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_1820 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VK055_4774 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D VK055_0887 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VK055_2119 ganA; beta-galactosidase ganA K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D VK055_2852 beta-galactosidase trimerization domain protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D VK055_5034 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D VK055_2961 family 4 glycosyl hydrolase C-terminal domain protein K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D VK055_3274 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VK055_2303 PTS system sugar-specific permease component family protein K02775 gatC; galactitol PTS system EIIC component
D VK055_3254 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VK055_0273 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D VK055_3369 dgoD; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D VK055_3367 dgoK; 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D VK055_2641 dgoK2; 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D VK055_3368 dgoA; 2-oxo-3-deoxygalactonate 6-phosphate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D VK055_2639 hypothetical protein K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D VK055_4263 sacA; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D VK055_2036 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D VK055_2210 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D VK055_1675 glycosyl hydrolases 31 family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:kpt00053]
D VK055_5029 ugd; nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VK055_3487 SMP-30/Gluconolaconase/LRE-like region family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VK055_5030 polysaccharide biosynthesis family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VK055_2634 putative L-galactonate oxidoreductase K23007 lgoD; L-galactonate 5-dehydrogenase [EC:1.1.1.414]
D VK055_2202 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_2875 ulaC; ulaC K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_0747 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_2203 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_2876 sgaB; ulaB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_0748 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_2204 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D VK055_2877 ulaA; ulaA K03475 ulaA; ascorbate PTS system EIIC component
D VK055_0749 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D VK055_2878 ulaG; phosphodiesterase / predicted L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D VK055_2874 sgaH; 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D VK055_2873 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VK055_2872 ulaF; L-ribulose-5-phosphate 4-epimerase ulaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VK055_2514 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VK055_2300 badF/BadG/BcrA/BcrD ATPase family protein K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D VK055_4384 gudD2; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D VK055_3928 garL; 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D VK055_3926 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:kpt00500]
D VK055_2035 sacX; negative regulator of sacY activity K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VK055_4263 sacA; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D VK055_2036 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D VK055_2210 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D VK055_1675 glycosyl hydrolases 31 family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D VK055_0250 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_5012 galF; regulatory protein GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_4954 &beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D VK055_3576 bcsA; cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D VK055_3586 celA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D VK055_0666 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_3107 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_3409 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_1225 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_4439 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_0665 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_3106 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_3411 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_2816 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_1228 licB; lichenan-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_4441 gmuB; oligo-beta-mannoside-specific phosphotransferaseenzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_0660 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_2612 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_3410 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_2814 celB2; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VK055_4274 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_1226 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VK055_4440 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_4442 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_2815 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_1143 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_1223 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_1680 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4152 bglA; aryl-phospho-beta-D-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4445 gmuD2; 6-phospho-beta-glucosidase gmuD K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4462 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4946 bglH; aryl-phospho-beta-D-glucosidase BglH K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4688 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_4275 gmuD; 6-phospho-beta-glucosidase gmuD K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VK055_3675 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VK055_3676 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D VK055_3673 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VK055_1483 pygB; glycogen phosphorylase, brain form K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VK055_3677 glgP; glgP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VK055_3684 glgP2; glycogen/starch/alpha-glucan phosphorylases family protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VK055_3674 glgX; glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D VK055_2405 pulA; pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D VK055_0025 amyK38; amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VK055_3534 alpha amylase, catalytic domain protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VK055_0648 alpha amylase, catalytic domain protein K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D VK055_3685 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D VK055_4747 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VK055_0994 phosphotransferase system, EIIC family protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_0995 PTS system, glucose-like IIB component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_0799 PTS system, glucose-like IIB component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_3379 PTS system, alpha-glucoside-specific IIBC component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_3452 PTS system, glucose-like IIB component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_0800 malH; maltose-6'-phosphate glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D VK055_3380 aglB; 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D VK055_0055 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D VK055_0054 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D VK055_0149 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D VK055_3601 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D VK055_2812 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VK055_2813 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D VK055_1820 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VK055_4774 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D VK055_3061 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VK055_2033 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VK055_2219 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VK055_4438 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:kpt00520]
D VK055_1259 glycosyl hydrolases 18 family protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VK055_1361 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VK055_4747 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VK055_1831 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VK055_1347 nagK; N-acetyl-D-glucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D VK055_1833 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VK055_1832 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VK055_2033 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VK055_2219 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VK055_4438 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VK055_3341 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VK055_3891 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D VK055_3340 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VK055_3422 phosphotransferase system, EIIC family protein K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VK055_0949 SIS domain protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VK055_3423 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VK055_0499 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D VK055_3878 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VK055_3124 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VK055_3851 yhcJ; N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D VK055_3189 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VK055_3188 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VK055_3625 arnA; fused UDP-L-Ara4N formyltransferase and UDP-GlcAC-4''-decarboxylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D VK055_3623 arnB; UDP-L-Ara4O C-4' transaminase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D VK055_3624 arnC; undecaprenyl phosphate-L-Ara4FN transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D VK055_3626 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D VK055_2724 xynB; beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D VK055_1366 ptsG; ptsG K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VK055_0994 phosphotransferase system, EIIC family protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_0995 PTS system, glucose-like IIB component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_4774 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D VK055_1820 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VK055_0250 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_5012 galF; regulatory protein GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_5029 ugd; nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VK055_1765 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VK055_1764 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VK055_1763 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VK055_5034 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D VK055_5030 polysaccharide biosynthesis family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VK055_0117 manX; manX K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D VK055_0116 manY; manY K02795 manY; mannose PTS system EIIC component
D VK055_0115 manZ; manZ K02796 manZ; mannose PTS system EIID component
D VK055_3061 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VK055_0991 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VK055_5028 manB; phosphoglucomutase/phosphomannomutase, C-terminal domain protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VK055_5027 manC; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VK055_3675 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:kpt00620]
D VK055_2990 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VK055_1056 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VK055_2452 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VK055_2295 e3 binding domain protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VK055_2451 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_1553 pflB2; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VK055_0164 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VK055_0254 adhE; adhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VK055_0343 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D VK055_4722 aldehyde dehydrogenase family protein K04021 eutE; aldehyde dehydrogenase
D VK055_0631 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D VK055_3271 fucO2; lactaldehyde reductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0781 zinc-binding dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0526 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VK055_2769 zinc-binding dehydrogenase family protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D VK055_3441 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D VK055_4724 putative alcohol dehydrogenase in ethanolamine utilization K04022 eutG; alcohol dehydrogenase
D VK055_0392 gluconate 2-dehydrogenase cytochrome c subunit K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D VK055_4828 ackA3; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VK055_4827 pta2; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VK055_4719 pta; phosphate acetyltransferase K04020 eutD; phosphotransacetylase
D VK055_0078 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VK055_0327 pyk2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VK055_2367 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VK055_3812 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VK055_3811 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VK055_4807 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VK055_1487 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VK055_4528 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VK055_0787 coenzyme A transferase family protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D VK055_0315 lctD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D VK055_3521 lctD2; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D VK055_0858 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VK055_1583 pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D VK055_1052 D-lactate dehydrogenase, NAD-dependent K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D VK055_4953 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D VK055_1007 putative aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D VK055_0487 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VK055_0458 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VK055_2339 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VK055_1529 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VK055_1411 glyoxylate reductase / hydroxypyruvate reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D VK055_4542 NAD binding domain of 6-phosphogluconate dehydrogenase family protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D VK055_3554 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D VK055_0636 malate dehydrogenase, NAD-requiring K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VK055_4714 maeB K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D VK055_2544 oadA; oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VK055_3840 oadA2; oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VK055_2545 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VK055_3841 oadB2; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VK055_3839 oadG2; oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VK055_2543 oadG; oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VK055_3833 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VK055_0948 mqo; malate dehydrogenase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D VK055_4892 mqo2; malate dehydrogenase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D VK055_0957 fumA2; fumarase A K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VK055_0990 fumA; fumarase A K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VK055_0988 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VK055_0329 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D VK055_2912 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VK055_2913 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VK055_2914 frdC; fumarate reductase membrane protein K00246 frdC; succinate dehydrogenase subunit C
D VK055_2915 frdD; fumarate reductase membrane protein K00247 frdD; succinate dehydrogenase subunit D
D VK055_3231 ppc; ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VK055_0171 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VK055_3698 pckA2; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VK055_0297 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VK055_3079 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_2493 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D VK055_4499 leuA2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:kpt00630]
D VK055_3078 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D VK055_2990 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VK055_3079 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D VK055_3833 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VK055_1802 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D VK055_2057 gltA2; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D VK055_1179 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D VK055_2445 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_1221 katE K03781 katE; catalase [EC:1.11.1.6]
D VK055_1411 glyoxylate reductase / hydroxypyruvate reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D VK055_4542 NAD binding domain of 6-phosphogluconate dehydrogenase family protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D VK055_3554 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D VK055_3714 gph6; phosphoglycolate phosphatase, bacterial K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D VK055_3295 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VK055_4625 glyA; glyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VK055_4144 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VK055_4142 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_4143 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VK055_3929 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D VK055_4385 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_3930 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_0793 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_1198 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VK055_1007 putative aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D VK055_4361 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D VK055_3837 L-tartrate dehydratase, &alpha subunit K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D VK055_3838 ttdB; L-tartrate dehydratase, beta subunit K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D VK055_1199 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D VK055_1462 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D VK055_0083 eda; eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VK055_3281 molybdopterin oxidoreductase family protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VK055_3282 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VK055_3283 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VK055_3284 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VK055_0246 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:kpt00640]
D VK055_2990 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VK055_0787 coenzyme A transferase family protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D VK055_4828 ackA3; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VK055_0163 ackA; acetate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15]
D VK055_4303 ackA2; acetate kinase K19697 pduW; propionate kinase [EC:2.7.2.15]
D VK055_4827 pta2; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VK055_4313 propanediol utilization PduL family protein K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_1553 pflB2; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VK055_0164 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VK055_5135 quinone oxidoreductase, YhdH/YhfP family protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_2367 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VK055_3812 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VK055_3811 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VK055_4807 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VK055_3645 gabT2; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D VK055_2311 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VK055_1794 sucC; succinyl-CoA synthetase, &beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VK055_1793 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VK055_2788 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VK055_2445 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VK055_0858 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VK055_1494 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D VK055_4043 NADP-dependent dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D VK055_3975 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D VK055_3235 dhaD2; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D VK055_4361 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D VK055_4320 pddA; diol dehydrase alpha subunit K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D VK055_4319 pddB; diol dehydrase beta subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D VK055_4318 pduE; propanediol dehydratase small subunit K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D VK055_3979 dhaT; 1,3-propanediol oxidoreductase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
D VK055_4308 iron-containing alcohol dehydrogenase family protein K13921 pduQ; 1-propanol dehydrogenase
D VK055_4309 aldehyde dehydrogenase family protein K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:kpt00650]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0412 NAD-dependent glycerol-3-phosphate dehydrogenasefamily protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D VK055_1034 paaC; 3-hydroxyacyl-CoA dehydrogenase PaaC K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_4880 ctfA; butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D VK055_4879 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D VK055_0254 adhE; adhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VK055_0343 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D VK055_2545 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VK055_3841 oadB2; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VK055_1199 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D VK055_1462 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D VK055_1798 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VK055_1797 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VK055_1800 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VK055_1799 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VK055_2912 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VK055_2913 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VK055_2914 frdC; fumarate reductase membrane protein K00246 frdC; succinate dehydrogenase subunit C
D VK055_2915 frdD; fumarate reductase membrane protein K00247 frdD; succinate dehydrogenase subunit D
D VK055_3645 gabT2; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D VK055_2311 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VK055_1465 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2310 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2667 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_0855 putative succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D VK055_1553 pflB2; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VK055_0164 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VK055_1056 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VK055_0415 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D VK055_0414 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D VK055_0410 bdhA; beta-D-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D VK055_2490 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_0407 alsS; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_4122 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_3391 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_3208 ilvB3; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_4429 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_2489 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VK055_3392 ilvN2; ilvN K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VK055_3207 ACT domain protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VK055_0408 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D VK055_0406 budC; diacetyl reductase (S-acetoin forming) K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:kpt00660]
D VK055_2490 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_0407 alsS; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_4122 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_3391 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_3208 ilvB3; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_4429 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_2489 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VK055_3392 ilvN2; ilvN K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VK055_3207 ACT domain protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VK055_0408 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D VK055_1794 sucC; succinyl-CoA synthetase, &beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VK055_1793 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VK055_3417 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D VK055_2495 leuC; leuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VK055_2496 leuD; leuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VK055_2494 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:kpt00562]
D VK055_3016 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VK055_1904 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VK055_4636 suhB; inositol monophosphatase, putative mRNA turnover protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VK055_1906 phyK; 3-phytase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D VK055_2777 iolG; inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D VK055_2044 oxidoreductase, NAD-binding Rossmann fold family protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D VK055_2789 putative cytoplasmic protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D VK055_0694 xylose isomerase-like TIM barrel family protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D VK055_2775 iolE; inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D VK055_2047 xylose isomerase-like TIM barrel family protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D VK055_2778 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D VK055_2787 putative inner membrane protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D VK055_2780 pfkB carbohydrate kinase family protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D VK055_2788 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VK055_3463 tpiA2; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:kpt00190]
D VK055_4837 nuoA; NADH:ubiquinone oxidoreductase, membrane subunitA K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D VK055_4838 nuoB; nuoB K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D VK055_4839 nuoC K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D VK055_4840 nuoE; nuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D VK055_4841 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D VK055_4842 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D VK055_4843 nuoH; NADH:ubiquinone oxidoreductase, membrane subunitH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D VK055_4844 nuoI; nuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D VK055_4845 nuoJ; NADH:ubiquinone oxidoreductase, membrane subunitJ K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D VK055_4846 nuoK; NADH:ubiquinone oxidoreductase, membrane subunitK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D VK055_4847 NADH:ubiquinone oxidoreductase, membrane subunitL K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D VK055_4848 nuoM; NADH:ubiquinone oxidoreductase, membrane subunitM K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D VK055_4849 nuoN; NADH:ubiquinone oxidoreductase, membrane subunitN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D VK055_1359 NADH dehydrogenase II K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D VK055_1798 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VK055_1797 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VK055_1800 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VK055_1799 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VK055_2912 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VK055_2913 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VK055_2914 frdC; fumarate reductase membrane protein K00246 frdC; succinate dehydrogenase subunit C
D VK055_2915 frdD; fumarate reductase membrane protein K00247 frdD; succinate dehydrogenase subunit D
D VK055_2164 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VK055_2163 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D VK055_2162 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D VK055_2161 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D VK055_2160 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D VK055_1308 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VK055_0551 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VK055_1790 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VK055_0778 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VK055_1307 cydB4; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VK055_0550 cydB2; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VK055_1789 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VK055_0777 cydB3; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VK055_1788 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D VK055_3334 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VK055_3336 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VK055_3335 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VK055_3333 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VK055_3337 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VK055_3330 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VK055_3332 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VK055_3331 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VK055_0632 ppa; ppa K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D VK055_2844 ppa2; ppa K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D VK055_4684 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VK055_0622 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:kpt00680]
D VK055_0526 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VK055_4931 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D VK055_3281 molybdopterin oxidoreductase family protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VK055_3282 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VK055_3283 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VK055_3284 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VK055_2986 formate dehydrogenase, alpha subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D VK055_2985 molybdopterin oxidoreductase family protein K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D VK055_0372 formate dehydrogenase, alpha subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D VK055_4625 glyA; glyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VK055_1198 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VK055_4391 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VK055_3231 ppc; ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VK055_3833 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VK055_3970 dhaK2; dihydroxyacetone kinase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D VK055_4977 fructose bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D VK055_2206 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VK055_4128 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VK055_2839 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VK055_3467 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VK055_3254 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VK055_0273 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D VK055_4828 ackA3; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VK055_4827 pta2; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VK055_2990 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VK055_0297 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VK055_1767 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D VK055_2580 ytjC; phosphoglycerate mutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D VK055_3514 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VK055_0864 gyaR; glyoxylate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_2302 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_1897 S-adenosyl-L-homocysteine hydrolase, NAD bindingdomain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_4135 serA; serA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_1549 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VK055_2588 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:kpt00910]
D VK055_0604 narK2; narK MFS nitrate/nitrite antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D VK055_0236 narK; narK MFS nitrate/nitrite antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D VK055_0228 NMT1-like family protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VK055_0229 ntrB; nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VK055_0230 nitrate ABC transporter, ATP-binding C and D family protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VK055_0603 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0238 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0602 narH2; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0239 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0600 narI2; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0242 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0232 molybdopterin dinucleotide binding domain protein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D VK055_0231 nirD; nitrite reductase [NAD(P)H], small subunit K00361 nasB; nitrite reductase [NAD(P)H] [EC:1.7.1.4]
D VK055_3718 nirB; nitrite reductase, large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D VK055_3717 nirD2; nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D VK055_1580 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D VK055_0837 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D VK055_1018 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D VK055_1249 gdhA K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D VK055_3295 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VK055_3853 glutamate synthase (NADPH) large chain glutamatesynthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VK055_3852 gltD; glutamate synthase (NADPH) small chain glutamatesynthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VK055_0461 cynT; carbonate dehydratase carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D VK055_2767 yadF2; carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D VK055_2434 yadF; carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:kpt00920]
D VK055_4738 cysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VK055_3460 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VK055_4739 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VK055_4740 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VK055_4741 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VK055_2245 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D VK055_2243 binding-protein-dependent transport system innermembrane component family protein K15552 tauC; taurine transport system permease protein
D VK055_2244 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D VK055_2242 tauD K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D VK055_0352 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_1515 ssuA; nitrate transport protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_4373 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_0353 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_1517 ycbM; ssuC K15554 ssuC; sulfonate transport system permease protein
D VK055_0354 binding-protein-dependent transport system innermembrane component family protein K15554 ssuC; sulfonate transport system permease protein
D VK055_1518 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D VK055_0355 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D VK055_0350 luciferase-like monooxygenase family protein K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D VK055_1516 ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D VK055_4365 ssuD2; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D VK055_1514 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D VK055_4403 cysN; cysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VK055_4402 cysD; cysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VK055_4404 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VK055_2855 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VK055_4399 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D VK055_4397 sulfite reductase [NADPH] flavoprotein, alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D VK055_4398 cysI; sulfite reductase (NADPH) hemoprotein, beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D VK055_4649 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VK055_3680 glpE; thiosulfate:cyanide sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D VK055_3519 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VK055_2143 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VK055_4750 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VK055_3080 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VK055_3243 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VK055_1559 dmsA2; dimethyl sulfoxide reductase, chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D VK055_0921 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VK055_1558 dmsB2; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VK055_1557 dimethyl sulfoxide reductase, chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D VK055_1335 AMP-binding enzyme family protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:kpt00061]
D VK055_2367 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VK055_3812 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VK055_3811 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VK055_4807 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VK055_1373 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D VK055_1375 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VK055_1376 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VK055_4800 fabB; fabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VK055_1372 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VK055_0712 fabF2; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VK055_1374 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_0788 fabG2; 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_2301 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_1916 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_1504 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VK055_2372 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VK055_1165 fabI; NADH-dependent enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VK055_0128 fadD; fadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:kpt00071]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4789 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_3136 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_2331 acyl-CoA dehydrogenase, C-terminal domain protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VK055_0128 fadD; fadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VK055_4279 hypothetical protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D VK055_4115 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D VK055_0526 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VK055_0254 adhE; adhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VK055_0631 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D VK055_3271 fucO2; lactaldehyde reductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0781 zinc-binding dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:kpt00561]
D VK055_4385 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_3930 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_0793 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_1198 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VK055_3441 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D VK055_3970 dhaK2; dihydroxyacetone kinase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D VK055_3973 dhaK; dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D VK055_3972 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D VK055_3971 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D VK055_3975 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D VK055_3235 dhaD2; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D VK055_3457 glpK2; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VK055_1945 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VK055_3044 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VK055_1377 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VK055_4009 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VK055_4038 1-acylglycerol-3-phosphate O-acyltransferases domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VK055_3043 dgkA; dgkA K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VK055_2961 family 4 glycosyl hydrolase C-terminal domain protein K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D VK055_3274 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VK055_3981 dhaB; glycerol dehydratase large subunit K06120 dhaB; glycerol dehydratase large subunit [EC:4.2.1.30]
D VK055_3982 gldB; glycerol dehydrase beta subunit K06121 dhbC; glycerol dehydratase medium subunit [EC:4.2.1.30]
D VK055_3983 dhaB3; glycerol dehydrase gamma subunit K06122 dhbE; glycerol dehydratase small subunit [EC:4.2.1.30]
D VK055_3979 dhaT; 1,3-propanediol oxidoreductase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00564 Glycerophospholipid metabolism [PATH:kpt00564]
D VK055_3518 gpsA; gpsA K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D VK055_3679 glpD K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VK055_4868 glpA; glycerol-3-phosphate dehydrogenase, anaerobic, Asubunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VK055_4867 glpB; glycerol-3-phosphate dehydrogenase, anaerobic, Bsubunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D VK055_4866 glpC; glycerol-3-phosphate dehydrogenase, anaerobic, Csubunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D VK055_3044 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VK055_4009 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VK055_4038 1-acylglycerol-3-phosphate O-acyltransferases domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VK055_3043 dgkA; dgkA K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VK055_3159 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VK055_3154 alpha/beta hydrolase fold family protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D VK055_3661 ugpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VK055_4870 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VK055_4279 hypothetical protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D VK055_4726 ethanolamine utilization EutA family protein K04019 eutA; ethanolamine utilization protein EutA
D VK055_2249 ethanolamine ammonia lyase large subunit family protein K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D VK055_4727 ethanolamine ammonia-lyase, putative regulatory subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D VK055_2250 ethanolamine ammonia-lyase light chain family protein K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D VK055_4728 ethanolamine ammonia-lyase light chain family protein K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D VK055_3461 cdh; CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D VK055_2377 cytidylyltransferase family protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VK055_4593 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VK055_2908 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D VK055_0034 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D VK055_2184 phosphatidylglycerophosphatase A family protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D VK055_1177 PAP2 superfamily protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D VK055_4616 haloacid dehalogenase-like hydrolase family protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D VK055_0265 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D VK055_1714 ybhO; cardiolipin synthase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:kpt00565]
D VK055_3159 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:kpt00600]
D VK055_0887 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VK055_2961 family 4 glycosyl hydrolase C-terminal domain protein K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D VK055_3274 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D VK055_3159 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D VK055_3159 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:kpt00592]
D VK055_3159 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VK055_4789 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_3136 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:kpt01040]
D VK055_2076 tesA; tesA K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VK055_2137 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VK055_1214 yciA; acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:kpt00230]
D VK055_4026 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VK055_3438 NUDIX domain protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VK055_3703 NUDIX domain protein K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D VK055_2592 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VK055_1820 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VK055_0212 prsA; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VK055_4811 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VK055_3088 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D VK055_4685 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VK055_0084 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D VK055_4619 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D VK055_4686 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D VK055_2070 purK; phosphoribosylaminoimidazole carboxylase, ATPasesubunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D VK055_2069 purE; purE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D VK055_4701 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D VK055_1323 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VK055_3086 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VK055_2098 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VK055_2087 calcineurin-like phosphoesterase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VK055_0434 survival SurE family protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VK055_4410 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VK055_1835 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D VK055_3701 HAD hydrolase, IA, variant 3 family protein K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D VK055_2091 pfkB carbohydrate kinase family protein K00892 gsk; inosine kinase [EC:2.7.1.73]
D VK055_2591 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VK055_2221 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VK055_0346 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VK055_4584 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VK055_2435 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D VK055_4665 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VK055_4652 ndk; ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VK055_2583 yjjX; ITPase/XTPase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D VK055_4090 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D VK055_2316 gpt; gpt K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D VK055_0675 glutamine amidotransferase class-I family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VK055_0707 glutamine amidotransferase class-I family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VK055_4666 guaA; guaA GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VK055_2464 guaC; guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D VK055_0697 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D VK055_4780 cytidine and deoxycytidylate deaminase zinc-binding region family protein K01487 guaD; guanine deaminase [EC:3.5.4.3]
D VK055_3472 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D VK055_4873 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VK055_4511 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VK055_4872 nrdB; nrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VK055_4510 nrdF2; ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VK055_2818 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VK055_2390 dgt; dgt K01129 dgt; dGTPase [EC:3.1.5.1]
D VK055_4833 yfbR; deoxyribonucleoside 5'-monophosphate phosphatase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VK055_3470 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VK055_3195 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VK055_4683 ppx; ppx K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VK055_4388 relA/SpoT family protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D VK055_3170 adenylate cyclase, class-I family protein K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VK055_2887 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VK055_0519 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D VK055_5132 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D VK055_4376 ygdH; putative oxidoreductase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VK055_4969 ade2; adenine deaminase 2 K01486 ade; adenine deaminase [EC:3.5.4.2]
D VK055_2857 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VK055_2093 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VK055_4389 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VK055_4028 calcineurin-like phosphoesterase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D VK055_2772 phosphohydrolase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D VK055_2528 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D VK055_4404 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VK055_4403 cysN; cysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VK055_4402 cysD; cysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VK055_0825 FAD binding domain protein K16839 hpxO; FAD-dependent urate hydroxylase [EC:1.14.13.113]
D VK055_0821 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D VK055_2060 uraH2; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D VK055_0822 hypothetical protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D VK055_0700 asp/Glu/Hydantoin racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D VK055_0702 hypothetical protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D VK055_0728 amidase, hydantoinase/carbamoylase family protein K02083 allC; allantoate deiminase [EC:3.5.3.9]
D VK055_0727 pucG; purine catabolism protein pucG K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D VK055_4003 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D VK055_4194 ureC2; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D VK055_4004 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D VK055_4195 ureB2; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D VK055_4005 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D VK055_0719 amidohydrolase, AtzE family protein K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5]
D VK055_0721 putative gamma-glutamyltransferase ywrD K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:kpt00240]
D VK055_2533 carB; carB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VK055_2534 carA; carA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VK055_2807 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VK055_2808 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VK055_2826 hypothetical protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D VK055_1392 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D VK055_1513 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D VK055_3486 pyrE; pyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D VK055_1174 pyrF; pyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D VK055_2381 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D VK055_4652 ndk; ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VK055_4389 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VK055_3821 maf2; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D VK055_3954 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D VK055_4390 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D VK055_1547 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D VK055_1247 hypothetical protein K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D VK055_5008 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D VK055_2087 calcineurin-like phosphoesterase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VK055_0434 survival SurE family protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VK055_4410 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VK055_1835 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D VK055_2601 pyrimidine nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D VK055_3149 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VK055_2221 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VK055_4689 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D VK055_2857 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VK055_0569 ribonucleoside hydrolase 1 K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-]
D VK055_2550 inosine-uridine preferring nucleoside hydrolase family protein K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-]
D VK055_4376 ygdH; putative oxidoreductase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VK055_4939 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D VK055_0427 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VK055_3722 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VK055_1902 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VK055_2818 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VK055_5009 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D VK055_4873 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VK055_4511 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VK055_4872 nrdB; nrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VK055_4510 nrdF2; ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VK055_4833 yfbR; deoxyribonucleoside 5'-monophosphate phosphatase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VK055_1369 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D VK055_3489 dut; dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D VK055_2593 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D VK055_0253 thymidine kinase family protein K00857 tdk; thymidine kinase [EC:2.7.1.21]
D VK055_4289 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VK055_1969 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D VK055_1522 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D VK055_1439 rutA; pyrimidine utilization protein A K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46]
D VK055_1444 rutF; pyrimidine utilization flavin reductase protein F K09024 rutF; flavin reductase [EC:1.5.1.-]
D VK055_1440 rutB; pyrimidine utilization protein B K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
D VK055_1441 rutC; pyrimidine utilization protein C K09021 rutC; aminoacrylate peracid reductase
D VK055_1442 rutD; pyrimidine utilization protein D K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-]
D VK055_0910 polysaccharide biosynthesis family protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D VK055_1443 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:kpt00250]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VK055_4601 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VK055_1297 lanS; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VK055_1256 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VK055_1666 iaaA K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VK055_3324 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D VK055_1836 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VK055_2332 hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D VK055_4834 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VK055_2935 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D VK055_3898 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VK055_3227 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VK055_2887 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VK055_1323 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VK055_2807 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VK055_2808 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VK055_3645 gabT2; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D VK055_2311 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VK055_1465 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2310 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2667 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_0855 putative succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D VK055_3853 glutamate synthase (NADPH) large chain glutamatesynthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VK055_3852 gltD; glutamate synthase (NADPH) small chain glutamatesynthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VK055_1018 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D VK055_1249 gdhA K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D VK055_1436 putA bifunctional enzyme and transcriptional regulator PutA transcriptional repressor, Proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VK055_3295 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VK055_2533 carB; carB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VK055_2534 carA; carA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VK055_0854 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D VK055_3341 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VK055_4811 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:kpt00260]
D VK055_3062 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VK055_2572 thrA; thrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VK055_3241 metL; metL K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VK055_0716 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VK055_3672 asd2; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VK055_2571 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D VK055_2570 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D VK055_1584 ltaA K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D VK055_4625 glyA; glyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VK055_1411 glyoxylate reductase / hydroxypyruvate reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D VK055_4542 NAD binding domain of 6-phosphogluconate dehydrogenase family protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D VK055_3554 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D VK055_4385 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_3930 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_0793 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VK055_1198 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VK055_1767 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D VK055_2580 ytjC; phosphoglycerate mutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D VK055_3514 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VK055_0864 gyaR; glyoxylate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_2302 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_1897 S-adenosyl-L-homocysteine hydrolase, NAD bindingdomain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_4135 serA; serA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_1549 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VK055_2588 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VK055_0910 polysaccharide biosynthesis family protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D VK055_3509 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VK055_3510 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D VK055_1043 maoA; primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D VK055_4144 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VK055_4142 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_4143 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VK055_4593 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VK055_1953 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D VK055_1952 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D VK055_4066 CBS domain protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D VK055_4065 metC3; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D VK055_4374 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VK055_0120 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VK055_3203 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VK055_0161 tdcB; tdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VK055_3384 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VK055_2645 putative D-serine deaminase (D-serine dehydratase) protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VK055_4271 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D VK055_1197 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VK055_1196 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VK055_0687 dat; diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VK055_0686 ddc; L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:kpt00270]
D VK055_3519 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VK055_2143 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VK055_4750 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VK055_4065 metC3; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D VK055_0773 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VK055_4046 metC2; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VK055_0996 aminotransferase class I and II family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VK055_4066 CBS domain protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D VK055_2246 homocysteine S-methyltransferase family protein K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D VK055_3075 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VK055_0305 cobalamin-independent synthase, Catalytic domainprotein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VK055_3151 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VK055_4104 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VK055_2443 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D VK055_2442 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D VK055_2391 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VK055_1908 mtnK; 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D VK055_0346 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VK055_4584 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VK055_1907 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D VK055_1899 mtnB; methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D VK055_1889 mtnC; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D VK055_1890 mtnD; acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D VK055_1071 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_3030 tyrB2; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_1075 aminotransferase class I and II family protein K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D VK055_0101 yebR; free methionine-(R)-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D VK055_0016 dcm; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_5150 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_5058 S-adenosyl-L-homocysteine hydrolase, NAD bindingdomain protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D VK055_4498 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VK055_3062 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VK055_2572 thrA; thrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VK055_3241 metL; metL K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VK055_0716 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VK055_3672 asd2; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VK055_3080 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VK055_3243 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VK055_3206 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VK055_4497 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VK055_4099 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VK055_4649 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VK055_0858 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VK055_4271 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D VK055_0027 dcyD; D-cysteine desulfhydrase monomer K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D VK055_3833 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VK055_4374 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VK055_0120 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VK055_4743 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D VK055_0864 gyaR; glyoxylate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_2302 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_1897 S-adenosyl-L-homocysteine hydrolase, NAD bindingdomain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_4135 serA; serA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_1549 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:kpt00280]
D VK055_3206 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_4789 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_3136 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_0795 NAD-dependent glycerol-3-phosphate dehydrogenasefamily protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VK055_2788 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VK055_2311 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VK055_0415 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D VK055_0414 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:kpt00290]
D VK055_3203 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VK055_0161 tdcB; tdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VK055_2495 leuC; leuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VK055_2496 leuD; leuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VK055_2494 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D VK055_2490 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_0407 alsS; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_4122 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_3391 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_3208 ilvB3; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_4429 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_2489 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VK055_3392 ilvN2; ilvN K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VK055_3207 ACT domain protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VK055_3202 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VK055_3205 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VK055_3206 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VK055_3533 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VK055_4834 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VK055_2493 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D VK055_4499 leuA2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:kpt00300]
D VK055_3062 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VK055_2572 thrA; thrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VK055_3241 metL; metL K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VK055_0716 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VK055_3672 asd2; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VK055_0038 dapA2; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VK055_0863 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VK055_4699 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VK055_2536 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D VK055_2386 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D VK055_3730 argD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VK055_0761 peptidase, ArgE/DapE family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VK055_4706 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VK055_3167 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VK055_4273 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VK055_4059 hypothetical protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D VK055_2483 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VK055_2482 UDP-MurNAc-L-Ala-D-Glu-L-Lys:D-Ala-D-Ala ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:kpt00310]
D VK055_1795 sucB; dihydrolipoyllysine-residue succinyltransferase,E2 component of oxoglutarate dehydrogenase(succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4271 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D VK055_2051 cadA; cadA K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D VK055_2366 ldcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D VK055_3967 ygjG; putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D VK055_0557 ydcW; 1-pyrroline dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D VK055_2311 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VK055_1465 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2310 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2667 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2308 taurine catabolism dioxygenase TauD, TfdA familyprotein K15737 csiD; glutarate dioxygenase [EC:1.14.11.64]
D VK055_2309 L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D VK055_0531 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D VK055_0300 4Fe-4S dicluster domain protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D VK055_4880 ctfA; butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D VK055_4879 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D VK055_2646 dpkA; dpkA K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
C 00220 Arginine biosynthesis [PATH:kpt00220]
D VK055_2800 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D VK055_3898 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VK055_3227 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VK055_4003 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D VK055_4194 ureC2; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D VK055_4004 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D VK055_4195 ureB2; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D VK055_4005 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D VK055_0854 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D VK055_3295 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VK055_1018 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D VK055_1249 gdhA K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VK055_4834 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VK055_4299 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D VK055_3228 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D VK055_3229 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D VK055_3730 argD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VK055_3230 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:kpt00330]
D VK055_0425 creatinine amidohydrolase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D VK055_0427 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VK055_3722 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VK055_1902 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VK055_4106 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D VK055_4107 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D VK055_4078 orn/Lys/Arg decarboxylase, N-terminal domain protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VK055_2442 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D VK055_2443 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D VK055_3967 ygjG; putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D VK055_0557 ydcW; 1-pyrroline dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D VK055_0918 acetyltransferase family protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D VK055_4548 speB2; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D VK055_1015 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D VK055_1236 astA2; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D VK055_1013 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D VK055_1234 astB2; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D VK055_1016 astC K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D VK055_1237 astC K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D VK055_1014 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D VK055_1235 astD2; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D VK055_1012 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D VK055_1233 astE2; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D VK055_1456 puuA; &gamma-glutamylputrescine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D VK055_1461 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D VK055_2006 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D VK055_1459 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D VK055_1457 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D VK055_2227 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D VK055_1436 putA bifunctional enzyme and transcriptional regulator PutA transcriptional repressor, Proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VK055_2280 proB; proB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VK055_2281 proA; proA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:kpt00340]
D VK055_5045 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D VK055_5038 hisE; phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D VK055_5040 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D VK055_5041 hisH; imidazole glycerol phosphate synthase, glutamineamidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D VK055_5039 hisF; imidazole glycerol phosphate synthase, HisF subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D VK055_5042 hisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D VK055_5043 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VK055_5044 hisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D VK055_1735 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VK055_1736 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D VK055_1739 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D VK055_1738 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:kpt00350]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VK055_5043 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VK055_1071 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_3030 tyrB2; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_1043 maoA; primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D VK055_1046 feaB K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D VK055_2005 feaB K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D VK055_0526 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VK055_0254 adhE; adhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VK055_0631 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D VK055_3271 fucO2; lactaldehyde reductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0781 zinc-binding dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_2659 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D VK055_2660 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D VK055_2653 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D VK055_2652 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D VK055_2654 hpcD; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D VK055_2650 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D VK055_2651 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D VK055_2655 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D VK055_2656 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D VK055_1465 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2310 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2667 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_0533 xylB; benzyl alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D VK055_0373 malate/L-lactate dehydrogenase family protein K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:kpt00360]
D VK055_1043 maoA; primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D VK055_1046 feaB K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D VK055_2005 feaB K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D VK055_1031 paaF; phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D VK055_1033 paaD; phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D VK055_1041 phenylacetic acid catabolic family protein K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D VK055_1040 phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D VK055_1039 phenylacetic acid catabolic family protein K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D VK055_1038 paaJ; phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D VK055_1037 2Fe-2S iron-sulfur cluster binding domain protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D VK055_1035 paaB; phenylacetate degradation putative enoyl-CoA hydratase PaaB K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D VK055_1042 paaN; phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D VK055_1032 pcaF2; 3-oxoadipyl-CoA thiolase K02615 paaJ; 3-oxo-5,6-didehydrosuberyl-CoA/3-oxoadipyl-CoA thiolase [EC:2.3.1.223 2.3.1.174]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_0412 NAD-dependent glycerol-3-phosphate dehydrogenasefamily protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D VK055_1034 paaC; 3-hydroxyacyl-CoA dehydrogenase PaaC K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VK055_5043 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VK055_1071 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_3030 tyrB2; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_3664 acetyltransferase family protein K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D VK055_0533 xylB; benzyl alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D VK055_0284 pyridine nucleotide-disulfide oxidoreductase family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VK055_0143 FAD dependent oxidoreductase family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VK055_0373 malate/L-lactate dehydrogenase family protein K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D VK055_0671 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D VK055_4115 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D VK055_0339 mhpA; 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D VK055_0340 mhpB; 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16]
D VK055_0341 mhpC; 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D VK055_0342 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D VK055_0344 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D VK055_0343 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:kpt00380]
D VK055_1795 sucB; dihydrolipoyllysine-residue succinyltransferase,E2 component of oxoglutarate dehydrogenase(succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4773 ipdC; indole-3-pyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D VK055_1221 katE K03781 katE; catalase [EC:1.11.1.6]
D VK055_0671 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:kpt00400]
D VK055_1768 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VK055_0294 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VK055_4577 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VK055_3710 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D VK055_2500 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D VK055_3813 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D VK055_0331 xylose isomerase-like TIM barrel family protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D VK055_3791 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D VK055_0527 quiA; quinate/shikimate dehydrogenase (Pyrroloquinoline-quinone) K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D VK055_3709 shikimate kinase family protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D VK055_2224 aroL; shikimate kinase 2 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D VK055_1548 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D VK055_4794 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D VK055_1193 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VK055_1194 trpD; anthranilate synthase component II K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D VK055_1195 indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D VK055_1197 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VK055_1196 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VK055_4578 tyrA K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VK055_4579 pheA; pheA K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D VK055_4539 bacterial extracellular solute-binding, 3 familyprotein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VK055_5043 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VK055_1071 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_3030 tyrB2; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:kpt00410]
D VK055_2429 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D VK055_3645 gabT2; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D VK055_2311 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VK055_1960 aminotransferase class-III family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D VK055_1043 maoA; primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D VK055_0557 ydcW; 1-pyrroline dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D VK055_2428 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VK055_1969 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D VK055_1522 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_2788 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:kpt00430]
D VK055_3663 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VK055_2242 tauD K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D VK055_1960 aminotransferase class-III family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D VK055_4827 pta2; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VK055_4828 ackA3; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VK055_1961 sdh; serine 3-dehydrogenase K15373 isfD; sulfoacetaldehyde reductase [EC:1.1.1.313]
C 00440 Phosphonate and phosphinate metabolism [PATH:kpt00440]
D VK055_3400 phnX; phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D VK055_3402 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VK055_2969 bacterial phosphonate metabolism family protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D VK055_2967 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D VK055_2968 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D VK055_2972 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D VK055_2973 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D VK055_2970 carbon-phosphorous lyase complex subunit K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D VK055_2975 phnP; phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:kpt00450]
D VK055_3243 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VK055_0773 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VK055_4046 metC2; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VK055_0996 aminotransferase class I and II family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VK055_3075 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VK055_0305 cobalamin-independent synthase, Catalytic domainprotein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VK055_3151 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VK055_4065 metC3; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D VK055_0323 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D VK055_1566 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D VK055_0920 dmsA; dimethyl sulfoxide reductase, chain A K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9]
D VK055_4403 cysN; cysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VK055_4402 cysD; cysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VK055_1252 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D VK055_2825 cys/Met metabolism PLP-dependent enzyme family protein K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D VK055_3530 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D VK055_4963 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:kpt00460]
D VK055_4954 &beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D VK055_3663 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VK055_1297 lanS; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VK055_1256 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VK055_1666 iaaA K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VK055_3324 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D VK055_4625 glyA; glyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:kpt00470]
D VK055_3031 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VK055_0144 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VK055_2475 ddlB; ddlB K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VK055_2233 D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VK055_4271 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D VK055_0854 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D VK055_3220 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VK055_2480 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VK055_1138 L-Ala-D/L-Glu epimerase, a muconate lactonizing enzyme L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D VK055_3384 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VK055_2645 putative D-serine deaminase (D-serine dehydratase) protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VK055_0027 dcyD; D-cysteine desulfhydrase monomer K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D VK055_3167 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VK055_4273 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VK055_0284 pyridine nucleotide-disulfide oxidoreductase family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VK055_0143 FAD dependent oxidoreductase family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:kpt00480]
D VK055_3663 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VK055_0223 putative cation transport protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D VK055_1807 lamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D VK055_1809 allophanate hydrolase subunit 1 family protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D VK055_1808 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D VK055_1976 ybdK; &gamma-glutamyl:cysteine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D VK055_4497 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VK055_4099 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VK055_2794 pepA; pepA Transcriptional Repressor, Aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VK055_4646 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VK055_1519 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VK055_2317 pepD K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VK055_0504 bphK; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_3004 glutathione S-transferase, C-terminal domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_3603 glutathione S-transferase, C-terminal domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_1657 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_2305 glutathione S-transferase, C-terminal domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_4824 glutathione S-transferase, N-terminal domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_3604 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D VK055_1318 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VK055_5026 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VK055_0081 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VK055_0289 putative glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D VK055_1270 ahpC/TSA family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D VK055_4078 orn/Lys/Arg decarboxylase, N-terminal domain protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VK055_2442 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D VK055_4058 CHAP domain protein K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:kpt00511]
D VK055_0887 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VK055_1124 glycosyl hydrolases family 2, sugar binding domain protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis [PATH:kpt00540]
D VK055_2371 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VK055_2471 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosaminedeacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VK055_2373 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VK055_2067 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VK055_2370 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VK055_1542 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VK055_3870 putative isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VK055_0220 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VK055_3869 yrbI; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D VK055_1539 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VK055_3497 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VK055_2055 lpxL3; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VK055_1399 lpxL2; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VK055_0077 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VK055_4523 aspartyl/Asparaginyl beta-hydroxylase family protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D VK055_4914 protein with low undecaprenyl pyrophosphate phosphatase activity K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D VK055_1723 sulfatase family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VK055_3565 sulfatase family protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D VK055_1877 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D VK055_3627 arnT; 4-amino-4-deoxy-L-arabinose (L-Ara4N) transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D VK055_1295 lpxL; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D VK055_2330 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VK055_4017 rfaE; bifunctional protein RfaE, domain I K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VK055_2352 yaeD; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VK055_3508 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VK055_3506 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D VK055_3507 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VK055_3501 putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D VK055_3498 glycosyl transferase 2 family protein K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D VK055_3500 glycosyl transferases group 1 family protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:kpt00542]
D VK055_3191 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:kpt00541]
D VK055_0250 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_5012 galF; regulatory protein GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VK055_1763 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VK055_5034 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D VK055_5029 ugd; nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VK055_5030 polysaccharide biosynthesis family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VK055_3186 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VK055_3187 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D VK055_3184 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase familyprotein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D VK055_3185 wecD; TDP-D-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D VK055_0991 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VK055_5028 manB; phosphoglucomutase/phosphomannomutase, C-terminal domain protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VK055_5027 manC; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VK055_3340 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VK055_3189 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VK055_3188 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:kpt00550]
D VK055_3878 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VK055_3124 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VK055_2476 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VK055_2480 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VK055_2483 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VK055_2475 ddlB; ddlB K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VK055_2233 D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VK055_2482 UDP-MurNAc-L-Ala-D-Glu-L-Lys:D-Ala-D-Ala ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VK055_2378 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VK055_4011 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VK055_1653 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VK055_2481 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VK055_2477 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VK055_3860 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VK055_3704 peptidoglycan synthetase penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VK055_2402 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VK055_4651 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D VK055_0673 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VK055_1865 mrdA2; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VK055_2484 ftsI2; essential cell division FtsI; penicillin-bindingprotein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VK055_0111 ftsI; essential cell division FtsI; penicillin-bindingprotein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VK055_1655 dacC2; penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_1868 dacC; penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_5052 DD-carboxypeptidase, penicillin-binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_3885 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:kpt00552]
D VK055_4011 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VK055_1653 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VK055_3191 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:kpt00543]
D VK055_5025 wcaJ; undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VK055_3191 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VK055_3180 glycosyltransferase, WecB/TagA/CpsF family protein K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D VK055_3182 wecF; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D VK055_5020 glycosyl transferases group 1 family protein K21001 pslH; polysaccharide biosynthesis protein PslH
D VK055_2950 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D VK055_2951 pgaD; poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D VK055_3519 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:kpt00730]
D VK055_3098 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D VK055_4976 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D VK055_3100 thiF; thiazole biosynthesis adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D VK055_4639 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VK055_2179 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VK055_3103 thiH; thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D VK055_2182 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VK055_3102 thiazole biosynthesis ThiG family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D VK055_4975 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D VK055_3099 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D VK055_2185 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D VK055_2907 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VK055_2229 phoA; alkaline phosphatase H K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VK055_1362 phosphotransferase enzyme family protein K07251 thiK; thiamine kinase [EC:2.7.1.89]
D VK055_2093 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VK055_0691 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:kpt00740]
D VK055_1178 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VK055_2188 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VK055_1651 HAD hydrolase, IIB family protein K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D VK055_3164 yigB; FMN phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D VK055_4020 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D VK055_2187 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D VK055_0477 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VK055_2555 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D VK055_1906 phyK; 3-phytase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D VK055_3029 aphA; class B acid phosphatase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2]
D VK055_1253 pho; acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D VK055_2660 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D VK055_3137 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D VK055_1514 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D VK055_4975 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D VK055_4026 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VK055_3438 NUDIX domain protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VK055_1320 NUDIX domain protein K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D VK055_4167 ubiX; 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4812 ubiX2; 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4418 bsdB; phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:kpt00750]
D VK055_0501 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D VK055_0503 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D VK055_4745 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D VK055_4250 putative oxidoreductase, NAD(P)-binding protein K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D VK055_4126 epd; erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D VK055_4803 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D VK055_1549 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VK055_2525 pdxA2; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D VK055_4612 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D VK055_2570 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:kpt00760]
D VK055_4601 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VK055_4120 homoserine dehydrogenase, NAD binding domain protein K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D VK055_1772 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D VK055_2460 nadC; nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D VK055_1520 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D VK055_2591 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VK055_2586 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D VK055_2087 calcineurin-like phosphoesterase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VK055_0434 survival SurE family protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VK055_4410 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VK055_1835 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D VK055_1861 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D VK055_4389 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VK055_3096 NUDIX domain protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D VK055_1230 nadE; nadE K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D VK055_4484 competence/damage-inducible CinA C-terminal domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D VK055_1258 pyrazinamidase / nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D VK055_1346 hypothetical protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D VK055_4563 ppnK; NAD kinase monomer K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D VK055_3226 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D VK055_0978 pntA; NAD(P)(+) transhydrogenase (AB-specific), alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D VK055_0977 NAD(P) transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D VK055_1465 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2310 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_2667 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VK055_0855 putative succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:kpt00770]
D VK055_2490 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_0407 alsS; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_4122 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_3391 ilvB2; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_3208 ilvB3; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_4429 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VK055_2489 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VK055_3392 ilvN2; ilvN K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VK055_3207 ACT domain protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VK055_3202 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VK055_3205 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VK055_2427 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D VK055_2176 apbA; putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D VK055_1045 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D VK055_2428 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VK055_3122 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D VK055_3490 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D VK055_4389 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VK055_3495 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D VK055_2465 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D VK055_4613 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D VK055_2200 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D VK055_3206 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VK055_1969 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D VK055_1522 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D VK055_2429 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:kpt00780]
D VK055_1729 putative methyltransferase, enzyme of biotin synthesis K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D VK055_4800 fabB; fabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VK055_1372 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VK055_0712 fabF2; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VK055_1374 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_0788 fabG2; 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_2301 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_1916 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_2372 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VK055_1165 fabI; NADH-dependent enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VK055_3689 bioH; pimelyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D VK055_1730 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VK055_1732 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VK055_0924 dethiobiotin synthetase subunit dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D VK055_1728 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D VK055_1731 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D VK055_3123 biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VK055_1891 dmsA3; dimethyl sulfoxide reductase, chain A K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D VK055_3561 biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:kpt00785]
D VK055_1870 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D VK055_1872 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D VK055_2590 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2452 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VK055_2295 e3 binding domain protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VK055_2451 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VK055_1796 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VK055_1795 sucB; dihydrolipoyllysine-residue succinyltransferase,E2 component of oxoglutarate dehydrogenase(succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VK055_4144 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VK055_4142 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VK055_4143 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:kpt00790]
D VK055_4932 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D VK055_2229 phoA; alkaline phosphatase H K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VK055_0068 ntpA; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D VK055_4010 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D VK055_2426 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VK055_3890 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D VK055_2529 dyrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VK055_4808 folC; folyl-polyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D VK055_1178 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VK055_3728 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D VK055_0122 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D VK055_1371 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D VK055_4822 folX; dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D VK055_0984 hypothetical protein K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D VK055_4395 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VK055_4394 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VK055_2146 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VK055_4377 queF; queuine synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VK055_1721 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VK055_1719 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VK055_1717 molybdopterin synthase large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VK055_2565 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VK055_1720 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VK055_1667 molybdopterin biosynthesis K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VK055_3306 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:kpt00670]
D VK055_2529 dyrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VK055_0984 hypothetical protein K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D VK055_2063 folD; bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VK055_4625 glyA; glyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VK055_4685 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VK055_3086 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VK055_3785 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VK055_4142 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VK055_3075 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VK055_4289 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VK055_0246 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D VK055_3237 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VK055_4136 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:kpt00860]
D VK055_4762 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VK055_0215 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D VK055_2396 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VK055_2240 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VK055_3171 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D VK055_3172 uroporphyrinogen-III synthase HemD family protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D VK055_3095 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D VK055_4732 coproporphyrinogen III oxidase family protein K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D VK055_3298 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D VK055_3131 flavodoxin family protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D VK055_2092 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D VK055_3173 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VK055_3716 cysG2; cysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D VK055_4401 cysG; cysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D VK055_2164 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VK055_4336 cbiX family protein K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D VK055_4337 cobI; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D VK055_4334 cobJ; precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D VK055_4332 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D VK055_4333 cobalamin synthesis G family protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D VK055_4335 cobK; precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D VK055_4329 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D VK055_4331 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D VK055_4330 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D VK055_4328 precorrin-8X methylmutase family protein K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D VK055_4326 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D VK055_3976 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VK055_1187 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VK055_4342 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D VK055_4327 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D VK055_4343 cobU; cobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D VK055_5056 cobS2; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D VK055_4344 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D VK055_5057 cobT2; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D VK055_1862 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D VK055_4302 GHMP kinase N terminal domain protein K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D VK055_4301 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D VK055_4718 cobalamin adenosyltransferase family protein K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
D VK055_3753 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:kpt00130]
D VK055_3046 ubiC; chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D VK055_3045 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VK055_3138 ubiD; 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D VK055_4167 ubiX; 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4812 ubiX2; 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4418 bsdB; phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4141 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D VK055_4874 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D VK055_4140 ubiH; 2-polyprenyl-6-methoxyphenol 4-hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D VK055_3147 ubiE; 2-OCTAPRENYL-METHOXY-BENZOQ-METH bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D VK055_1844 octaprenyl methyl methoxy benzoquinone hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D VK055_4852 menF; menF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VK055_1925 entC; ENTC isochorismate synthase 1 K02361 entC; isochorismate synthase [EC:5.4.4.2]
D VK055_4853 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D VK055_4854 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D VK055_4856 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D VK055_4857 menE; O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D VK055_4855 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D VK055_0301 ybdB; proofreading thioesterase in enterobactin biosynthesis K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D VK055_3252 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VK055_2684 nqo2; ribosyldihydronicotinamide dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VK055_1448 wrbA; quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VK055_2859 ytfG; NAD(P)H:quinone oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:kpt00900]
D VK055_2182 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VK055_2379 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D VK055_4407 ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthetase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D VK055_0213 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D VK055_4408 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D VK055_4655 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D VK055_2551 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4167 ubiX; 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4812 ubiX2; 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4418 bsdB; phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4165 idi; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D VK055_2181 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VK055_3880 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VK055_2378 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:kpt00907]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_2769 zinc-binding dehydrogenase family protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D VK055_4789 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_3136 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D VK055_4125 tkt3; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1942 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1943 transketolase, pyrimidine binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1701 transketolase, pyrimidine binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1702 transketolase, thiamine diphosphate binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_1336 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VK055_4711 tkt2; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:kpt00523]
D VK055_3186 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VK055_3187 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:kpt01053]
D VK055_4852 menF; menF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VK055_1925 entC; ENTC isochorismate synthase 1 K02361 entC; isochorismate synthase [EC:5.4.4.2]
D VK055_1923 entB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D VK055_1922 entA; entA K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D VK055_1935 entD; 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D VK055_1924 entE; (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D VK055_1931 entF; amino acid adenylation domain protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D VK055_1921 ybdB2; proofreading thioesterase in enterobactin biosynthesis K24147 entH; proofreading thioesterase EntH
D VK055_5126 ybtS; salicylate synthase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21]
D VK055_5117 ybtE; 2,3-dihydroxybenzoate-AMP ligase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D VK055_5121 irp2; amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D VK055_5119 ybtU; thiazolinyl imide reductase family protein K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D VK055_5120 irp1; methyltransferase domain protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
C 01055 Biosynthesis of vancomycin group antibiotics
D VK055_3187 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:kpt00946]
D VK055_4954 &beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D VK055_0661 bacterial alpha-L-rhamnosidase family protein K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:kpt00332]
D VK055_2280 proB; proB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VK055_2281 proA; proA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:kpt00261]
D VK055_4403 cysN; cysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VK055_4402 cysD; cysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VK055_3062 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VK055_2572 thrA; thrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VK055_3241 metL; metL K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VK055_0716 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VK055_3672 asd2; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VK055_0038 dapA2; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VK055_0863 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VK055_4699 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VK055_2536 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:kpt00521]
D VK055_4774 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D VK055_1820 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VK055_3016 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VK055_1904 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VK055_4636 suhB; inositol monophosphatase, putative mRNA turnover protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VK055_2777 iolG; inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D VK055_2044 oxidoreductase, NAD-binding Rossmann fold family protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D VK055_3186 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VK055_3187 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D VK055_4774 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:kpt00525]
D VK055_3186 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VK055_3187 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:kpt00401]
D VK055_4578 tyrA K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VK055_5043 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VK055_1071 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_3030 tyrB2; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D VK055_1193 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D VK055_1375 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VK055_1374 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_0788 fabG2; 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_2301 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_1916 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_1165 fabI; NADH-dependent enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D VK055_1373 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:kpt00999]
D VK055_4104 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VK055_3791 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D VK055_4954 &beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:kpt00362]
D VK055_0611 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D VK055_0612 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D VK055_0613 benC; benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D VK055_0615 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D VK055_0610 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D VK055_0608 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D VK055_0609 catC; muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D VK055_0961 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D VK055_0965 pcaI; 3-oxoadipate CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D VK055_0964 catJ; 3-oxoadipate CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D VK055_4789 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_3136 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_0963 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D VK055_0342 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D VK055_0344 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D VK055_0343 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D VK055_0588 pptA; tautomerase pptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D VK055_3197 thermophilic reversible gamma-resorcylate decarboxylase K20941 graF; gamma-resorcylate decarboxylase [EC:4.1.1.103]
D VK055_0529 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D VK055_0530 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D VK055_0962 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D VK055_0960 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VK055_0844 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VK055_4208 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VK055_3239 gamma-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VK055_3418 prpF family protein K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D VK055_3416 glcNAc-PI de-N-acetylase family protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D VK055_3417 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D VK055_2617 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_2545 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VK055_3841 oadB2; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_0412 NAD-dependent glycerol-3-phosphate dehydrogenasefamily protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D VK055_1034 paaC; 3-hydroxyacyl-CoA dehydrogenase PaaC K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:kpt00627]
D VK055_1487 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VK055_0562 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D VK055_4419 bsdC; phenolic acid decarboxylase subunit C K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61]
D VK055_4420 bsdD; phenolic acid decarboxylase subunit D K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61]
D VK055_4167 ubiX; 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4812 ubiX2; 3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_4418 bsdB; phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VK055_3415 aromatic-ring-opening dioxygenase LigAB, LigA subunit K04099 desB; gallate dioxygenase [EC:1.13.11.57]
D VK055_1301 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
D VK055_4168 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
D VK055_4880 ctfA; butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D VK055_4879 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:kpt00364]
D VK055_0611 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D VK055_0612 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D VK055_0613 benC; benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D VK055_0615 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D VK055_0610 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D VK055_4053 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D VK055_3150 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D VK055_0608 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:kpt00625]
D VK055_0631 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D VK055_3271 fucO2; lactaldehyde reductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0781 zinc-binding dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0526 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VK055_0254 adhE; adhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:kpt00361]
D VK055_0610 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D VK055_4053 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D VK055_3150 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D VK055_0608 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00623 Toluene degradation [PATH:kpt00623]
D VK055_0533 xylB; benzyl alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D VK055_0562 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D VK055_0610 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D VK055_0608 catB; muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D VK055_4053 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D VK055_3150 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:kpt00622]
D VK055_0533 xylB; benzyl alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D VK055_0562 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D VK055_0611 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D VK055_0612 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D VK055_0613 benC; benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D VK055_0615 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D VK055_0588 pptA; tautomerase pptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D VK055_0342 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D VK055_0344 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D VK055_0343 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation [PATH:kpt00633]
D VK055_1607 frp; NADPH-flavin oxidoreductase K10678 nfsA; nitroreductase [EC:1.-.-.-]
D VK055_1987 nfnB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D VK055_0488 onr; pentaerythritol tetranitrate reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D VK055_4789 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VK055_3136 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:kpt00643]
D VK055_1046 feaB K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D VK055_2005 feaB K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D VK055_0787 coenzyme A transferase family protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
D VK055_4003 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D VK055_4194 ureC2; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D VK055_4004 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D VK055_4195 ureB2; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D VK055_4005 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:kpt00930]
D VK055_3487 SMP-30/Gluconolaconase/LRE-like region family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VK055_1036 putative enoyl-CoA hydratase, mitochondrial K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D VK055_3135 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VK055_4790 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:kpt00621]
D VK055_0588 pptA; tautomerase pptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D VK055_0342 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D VK055_0344 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D VK055_0343 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:kpt00626]
D VK055_0631 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D VK055_3271 fucO2; lactaldehyde reductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0781 zinc-binding dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D VK055_0526 S-(hydroxymethyl)glutathione dehydrogenase/classIII alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VK055_0254 adhE; adhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D VK055_0529 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D VK055_0530 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:kpt03020]
D VK055_3110 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VK055_3109 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VK055_3778 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VK055_3471 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:kpt03010]
D VK055_1546 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D VK055_2383 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D VK055_3761 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D VK055_3777 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D VK055_3772 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D VK055_2869 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D VK055_3748 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D VK055_3769 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D VK055_3848 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D VK055_3754 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D VK055_3747 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D VK055_3776 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D VK055_3768 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D VK055_3905 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D VK055_4568 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D VK055_2867 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D VK055_3759 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D VK055_2556 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D VK055_3997 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D VK055_3113 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D VK055_3758 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D VK055_3755 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D VK055_3756 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D VK055_3767 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5
D VK055_3770 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D VK055_3111 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VK055_2866 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D VK055_3112 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D VK055_3114 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D VK055_3847 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D VK055_3765 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D VK055_3774 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D VK055_3762 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D VK055_3779 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D VK055_3771 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D VK055_4571 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D VK055_0279 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D VK055_3760 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D VK055_3757 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D VK055_3766 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D VK055_4903 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D VK055_3882 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D VK055_3492 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D VK055_3764 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D VK055_3773 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D VK055_2115 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VK055_3245 rpmE2; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VK055_1378 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D VK055_3493 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D VK055_0278 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D VK055_2113 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D VK055_2351 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3311 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3219 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3129 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_4586 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_2699 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_4588 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3216 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_2348 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3796 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_2697 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3309 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3797 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_4589 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3215 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3308 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_2347 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3082 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_2696 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3799 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:kpt00970]
D VK055_2349 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_3217 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_3127 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_4765 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_4766 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_4784 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_2062 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_3178 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_4490 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_4491 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_4493 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_4492 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_5128 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VK055_5138 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VK055_5131 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VK055_5143 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VK055_2335 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VK055_2346 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VK055_3214 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VK055_0036 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VK055_1842 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VK055_1843 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VK055_1839 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VK055_1840 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VK055_2698 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VK055_3084 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VK055_3310 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VK055_4587 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VK055_0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_2902 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_2901 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_2903 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_3119 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_4171 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_3177 tRNA-His K14226 tRNA-His; tRNA His
D VK055_2350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VK055_3128 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VK055_3218 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VK055_2766 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_2605 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_2607 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_2606 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_3176 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_3893 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_1838 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_1773 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1775 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1779 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1777 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_4758 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1774 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1837 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_1841 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_3993 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_3899 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_4346 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_4345 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_2941 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VK055_4076 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VK055_4895 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VK055_3567 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VK055_3175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VK055_1412 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_1416 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_1484 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_5145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_4489 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_3118 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VK055_3798 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VK055_2282 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VK055_3121 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VK055_3213 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VK055_0244 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VK055_0245 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VK055_3120 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VK055_0471 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_1776 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_4761 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_4760 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_4759 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_1778 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_0473 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_0472 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_3447 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D VK055_4762 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VK055_1830 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VK055_4487 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VK055_2548 threonyl and Alanyl tRNA synthetase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VK055_0067 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VK055_1526 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VK055_3546 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VK055_3547 glyS; glycyl-tRNA synthetase, &beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VK055_0276 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VK055_1560 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VK055_2825 cys/Met metabolism PLP-dependent enzyme family protein K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D VK055_3530 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D VK055_2065 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VK055_4963 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VK055_3785 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VK055_2796 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VK055_1858 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VK055_2554 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VK055_4164 lysS2; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VK055_2049 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VK055_0059 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VK055_2358 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VK055_4656 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VK055_0280 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VK055_0281 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VK055_0502 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VK055_2689 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VK055_3715 trpS2; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:kpt03060]
D VK055_3775 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VK055_3116 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VK055_3892 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VK055_2195 secD; secD K03072 secD; preprotein translocase subunit SecD
D VK055_2194 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VK055_2196 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D VK055_3358 oxaA; inner-membrane protein insertion factor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VK055_2469 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VK055_3517 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D VK055_2470 secretion monitor family protein K13301 secM; secretion monitor
D VK055_4567 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VK055_3640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VK055_3143 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D VK055_3142 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D VK055_1873 ybeC; tatE K03425 tatE; sec-independent protein translocase protein TatE
D VK055_4608 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VK055_2553 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:kpt04122]
D VK055_4639 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VK055_4649 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VK055_3634 sirA-like family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VK055_3746 dsrH; sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VK055_3745 tusC; sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VK055_3744 dsrE/DsrF-like family protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VK055_1488 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VK055_1321 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VK055_1717 molybdopterin synthase large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VK055_1721 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VK055_1718 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D VK055_1245 putative thiosulfate sulfur transferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D VK055_1668 moeB; molybdopterin synthase sulfurylase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D VK055_1719 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VK055_2565 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VK055_1720 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VK055_2179 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VK055_3101 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D VK055_3100 thiF; thiazole biosynthesis adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:kpt03018]
D VK055_4286 nudH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VK055_1382 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VK055_3194 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VK055_4391 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VK055_3907 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VK055_1700 DEAD-box-containing ATP-dependent RNA helicase family member K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VK055_2885 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VK055_3909 csdA, DEAD-box RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VK055_3158 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VK055_3192 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VK055_3254 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VK055_2560 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VK055_2930 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VK055_2894 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D VK055_4684 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VK055_0622 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VK055_2425 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:kpt03030]
D VK055_0089 holE; DNA polymerase III, &theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D VK055_2336 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VK055_2368 DNA polymerase III, &alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VK055_2097 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VK055_1368 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VK055_1860 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VK055_2603 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VK055_2795 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VK055_3360 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VK055_3032 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VK055_3996 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VK055_3025 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VK055_2338 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VK055_2369 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VK055_3301 polA; DNA polymerase I, 3' --5' polymerase, 5' --3' and 3' --5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VK055_3473 ligB; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_4754 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:kpt03410]
D VK055_0508 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VK055_4598 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VK055_4082 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VK055_3494 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VK055_1803 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D VK055_5007 3-methyl-adenine DNA glycosylase II, inducible K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VK055_3562 tag; 3-methyladenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VK055_3994 uracil DNA glycosylase superfamily protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D VK055_1238 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VK055_4925 apurinic endonuclease family protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VK055_3301 polA; DNA polymerase I, 3' --5' polymerase, 5' --3' and 3' --5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VK055_4162 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VK055_3473 ligB; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_4754 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:kpt03420]
D VK055_1352 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VK055_3026 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D VK055_1726 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VK055_0033 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D VK055_3163 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VK055_3301 polA; DNA polymerase I, 3' --5' polymerase, 5' --3' and 3' --5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VK055_3473 ligB; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_4754 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:kpt03430]
D VK055_4422 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VK055_2896 mutL; mutL K03572 mutL; DNA mismatch repair protein MutL
D VK055_4284 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D VK055_3163 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VK055_5051 exonuclease I, 3' --5' specific deoxyribophosphodiesterase K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VK055_4663 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VK055_2180 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VK055_0088 exonuclease family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D VK055_4162 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VK055_3025 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VK055_2368 DNA polymerase III, &alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VK055_3360 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VK055_2097 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VK055_1860 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VK055_1368 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VK055_2336 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VK055_0089 holE; DNA polymerase III, &theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D VK055_2795 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VK055_2603 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VK055_3473 ligB; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_4754 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_1639 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_3712 dam3; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_5159 dam2; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:kpt03440]
D VK055_4162 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VK055_3025 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VK055_3361 recF; ssDNA and dsDNA binding, ATP binding protein K03629 recF; DNA replication and repair protein RecF
D VK055_4611 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VK055_2095 recR; recombination protein RecR K06187 recR; recombination protein RecR
D VK055_4485 recA; protein RecA K03553 recA; recombination protein RecA
D VK055_3301 polA; DNA polymerase I, 3' --5' polymerase, 5' --3' and 3' --5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VK055_0071 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VK055_0072 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VK055_0070 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VK055_3468 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VK055_4296 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VK055_4294 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VK055_4297 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VK055_2368 DNA polymerase III, &alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VK055_3360 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VK055_2097 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VK055_1860 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VK055_1368 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VK055_2336 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VK055_0089 holE; DNA polymerase III, &theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D VK055_2795 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VK055_2603 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VK055_3246 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VK055_2100 primosomal replication priB and priC family protein K04067 priC; primosomal replication protein N''
D VK055_2621 dnaT; dnaT K02317 dnaT; DNA replication protein DnaT
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:kpt03250]
D VK055_3725 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:kpt02010]
D VK055_4738 cysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VK055_3460 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VK055_4739 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VK055_4740 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VK055_4741 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VK055_0228 NMT1-like family protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VK055_0229 ntrB; nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VK055_0230 nitrate ABC transporter, ATP-binding C and D family protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VK055_2245 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D VK055_2243 binding-protein-dependent transport system innermembrane component family protein K15552 tauC; taurine transport system permease protein
D VK055_2244 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D VK055_0352 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_1515 ssuA; nitrate transport protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_4373 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_0353 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_1517 ycbM; ssuC K15554 ssuC; sulfonate transport system permease protein
D VK055_0354 binding-protein-dependent transport system innermembrane component family protein K15554 ssuC; sulfonate transport system permease protein
D VK055_1518 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D VK055_0355 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D VK055_0688 putative thiamine biosynthesis protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D VK055_0689 binding-protein-dependent transport system innermembrane component family protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D VK055_0690 ABC transporter family protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D VK055_1759 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D VK055_0335 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein
D VK055_0176 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein
D VK055_1758 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D VK055_1756 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VK055_1762 ABC transporter family protein K05776 modF; molybdate transport system ATP-binding protein
D VK055_0597 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D VK055_0375 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D VK055_1479 fbpA; fe(3+)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D VK055_0598 binding-protein-dependent transport system innermembrane component family protein K02011 afuB; iron(III) transport system permease protein
D VK055_0376 binding-protein-dependent transport system innermembrane component family protein K02011 afuB; iron(III) transport system permease protein
D VK055_1478 binding-protein-dependent transport system innermembrane component family protein K02011 afuB; iron(III) transport system permease protein
D VK055_0596 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VK055_0377 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VK055_1477 fbpC; fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VK055_2506 thiB; thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D VK055_2507 thiP; thiamine/thiamine pyrophosphate ABC transporter,permease protein K02063 thiP; thiamine transport system permease protein
D VK055_2509 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VK055_1333 potD; potD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VK055_1332 potC; potC K11070 potC; spermidine/putrescine transport system permease protein
D VK055_1331 potB; potB K11071 potB; spermidine/putrescine transport system permease protein
D VK055_1330 potA; potA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VK055_1604 potF; potF K11073 potF; putrescine transport system substrate-binding protein
D VK055_1601 potI; potI K11074 potI; putrescine transport system permease protein
D VK055_1602 potH K11075 potH; putrescine transport system permease protein
D VK055_1603 potG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D VK055_3404 phnS; 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D VK055_3407 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D VK055_3406 phnU; 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D VK055_3405 phnT; 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D VK055_4507 proX; proX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VK055_4508 binding-protein-dependent transport system innermembrane component family protein K02001 proW; glycine betaine/proline transport system permease protein
D VK055_4509 proV; proV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VK055_4955 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D VK055_4956 binding-protein-dependent transport system innermembrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D VK055_4958 binding-protein-dependent transport system innermembrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D VK055_4957 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D VK055_3051 malE; malE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VK055_3052 malF K10109 malF; maltose/maltodextrin transport system permease protein
D VK055_3053 malG; malG K10110 malG; maltose/maltodextrin transport system permease protein
D VK055_2125 malK; malK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VK055_3049 malK2; malK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VK055_2123 cycB; cyclodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D VK055_2122 binding-protein-dependent transport system innermembrane component family protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D VK055_2121 binding-protein-dependent transport system innermembrane component family protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D VK055_4265 bacterial extracellular solute-binding family protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D VK055_4268 binding-protein-dependent transport system innermembrane component family protein K10193 togM; oligogalacturonide transport system permease protein
D VK055_4267 binding-protein-dependent transport system innermembrane component family protein K10194 togN; oligogalacturonide transport system permease protein
D VK055_4266 ABC transporter family protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D VK055_3875 yrbC; mlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D VK055_3874 yrbD; mlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VK055_3873 yrbE; mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VK055_3876 yrbB; mlaB K07122 mlaB; phospholipid transport system transporter-binding protein
D VK055_3872 yrbF; mlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VK055_3317 rbsB K10439 rbsB; ribose transport system substrate-binding protein
D VK055_2980 periplasmic binding and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D VK055_1892 ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit K10439 rbsB; ribose transport system substrate-binding protein
D VK055_0767 periplasmic binding and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D VK055_3318 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_2979 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_1894 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_1895 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_0764 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_0765 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VK055_3319 ccmA11; heme ABC exporter, ATP-binding protein CcmA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VK055_2978 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VK055_1893 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VK055_3320 rbsD; D-ribose utilization K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D VK055_0051 periplasmic binding and sugar binding domain of LacI family protein K10537 araF; L-arabinose transport system substrate-binding protein
D VK055_0053 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein
D VK055_0052 araG; arabinose import ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D VK055_2843 ytfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein
D VK055_2840 yjfF; yjfF K23509 ytfT; galactofuranose transport system permease protein
D VK055_2841 ytfT K23509 ytfT; galactofuranose transport system permease protein
D VK055_2842 ytfR; ytfR K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D VK055_4935 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VK055_4937 branched-chain amino acid transport system / permease component family protein K10541 mglC; methyl-galactoside transport system permease protein
D VK055_4936 ABC transporter family protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D VK055_4088 periplasmic binding and sugar binding domain of LacI family protein K10543 xylF; D-xylose transport system substrate-binding protein
D VK055_3539 xylF; D-xylose ABC transporter, D-xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D VK055_4086 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D VK055_3537 xylH; xylH K10544 xylH; D-xylose transport system permease protein
D VK055_4087 ABC transporter family protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D VK055_3538 ccmA12; heme ABC exporter, ATP-binding protein CcmA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D VK055_3267 rhaS; rhamnose ABC transporter, rhamnose-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D VK055_3269 branched-chain amino acid transport system / permease component family protein K10560 rhaP; rhamnose transport system permease protein
D VK055_3270 branched-chain amino acid transport system / permease component family protein K10561 rhaQ; rhamnose transport system permease protein
D VK055_3268 ccmA10; heme ABC exporter, ATP-binding protein CcmA K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D VK055_1936 periplasmic binding and sugar binding domain of LacI family protein K17202 eryG; erythritol transport system substrate-binding protein
D VK055_1939 branched-chain amino acid transport system / permease component family protein K17203 eryF; erythritol transport system permease protein
D VK055_1938 ccmA5; heme ABC exporter, ATP-binding protein CcmA K17204 eryE; erythritol transport system ATP-binding protein
D VK055_0204 periplasmic binding and sugar binding domain of LacI family protein K17213 K17213; inositol transport system substrate-binding protein
D VK055_2042 periplasmic binding and sugar binding domain of LacI family protein K17213 K17213; inositol transport system substrate-binding protein
D VK055_2040 branched-chain amino acid transport system / permease component family protein K17214 K17214; inositol transport system permease protein
D VK055_2041 ccmA6; heme ABC exporter, ATP-binding protein CcmA K17215 K17215; inositol transport system ATP-binding protein
D VK055_2774 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D VK055_3657 ugpB; ugpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D VK055_2770 binding-protein-dependent transport system innermembrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D VK055_3658 ugpA; ugpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D VK055_2771 binding-protein-dependent transport system innermembrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D VK055_3659 ugpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D VK055_2773 ugpC2; ugpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D VK055_3660 ugpC; ugpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D VK055_3342 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VK055_3343 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D VK055_3344 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D VK055_3345 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VK055_2269 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D VK055_2270 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D VK055_2271 phnE2; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D VK055_2268 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D VK055_2020 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D VK055_4814 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D VK055_4817 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein
D VK055_4816 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D VK055_4818 hisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D VK055_4815 lysine-arginine-ornithine-binding periplasmic family protein K10014 hisJ; histidine transport system substrate-binding protein
D VK055_1689 glnH; glnH K10036 glnH; glutamine transport system substrate-binding protein
D VK055_1690 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein
D VK055_1691 glnQ; glnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D VK055_2905 artI3; artI K09996 artJ; arginine transport system substrate-binding protein
D VK055_1595 artI2; artI K09996 artJ; arginine transport system substrate-binding protein
D VK055_1592 artI; artI K09997 artI; arginine transport system substrate-binding protein
D VK055_1594 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09998 artM; arginine transport system permease protein
D VK055_1593 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09999 artQ; arginine transport system permease protein
D VK055_1591 ABC transporter family protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VK055_1850 bacterial extracellular solute-binding, 3 familyprotein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D VK055_1852 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D VK055_1851 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D VK055_1853 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D VK055_0026 bacterial extracellular solute-binding, 3 familyprotein K02424 tcyA; L-cystine transport system substrate-binding protein
D VK055_0028 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein
D VK055_0029 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D VK055_0165 ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_2251 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_3647 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_3650 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_0166 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_2252 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_3651 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_2253 livM; branched-chain amino-acid ABC transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_0167 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_3652 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_0168 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_2254 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_3653 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_2255 livF; branched-chain amino-acid ABC transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_0169 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_3654 livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_2355 metQ2; metQ K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_0288 metQ; metQ K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_1074 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_0834 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_3437 metQ3; metQ K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_4370 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_2354 binding-protein-dependent transport system innermembrane component family protein K02072 metI; D-methionine transport system permease protein
D VK055_1072 binding-protein-dependent transport system innermembrane component family protein K02072 metI; D-methionine transport system permease protein
D VK055_0836 binding-protein-dependent transport system innermembrane component family protein K02072 metI; D-methionine transport system permease protein
D VK055_4369 binding-protein-dependent transport system innermembrane component family protein K02072 metI; D-methionine transport system permease protein
D VK055_2353 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VK055_1073 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D VK055_0835 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D VK055_4368 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D VK055_0880 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein
D VK055_0879 urtB; urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D VK055_0878 urtC; urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D VK055_0877 urtD; urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D VK055_0876 urtE; urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D VK055_0258 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_1485 oppA2; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_1136 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_0259 oppB; oppB K15581 oppB; oligopeptide transport system permease protein
D VK055_0260 binding-protein-dependent transport system innermembrane component family protein K15582 oppC; oligopeptide transport system permease protein
D VK055_0261 oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VK055_0262 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VK055_3568 dppA K12368 dppA; dipeptide transport system substrate-binding protein
D VK055_0563 dppA K12368 dppA; dipeptide transport system substrate-binding protein
D VK055_3569 dppB; dppB K12369 dppB; dipeptide transport system permease protein
D VK055_3570 dppC; dppC K12370 dppC; dipeptide transport system permease protein
D VK055_3571 dppD; dppD K12371 dppD; dipeptide transport system ATP-binding protein
D VK055_3572 dppF K12372 dppF; dipeptide transport system ATP-binding protein
D VK055_1157 bacterial extracellular solute-binding, 5 Middlefamily protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VK055_1158 binding-protein-dependent transport system innermembrane component family protein K19227 sapB; cationic peptide transport system permease protein
D VK055_1159 N-terminal TM domain of oligopeptide transport permease C family protein K19228 sapC; cationic peptide transport system permease protein
D VK055_1160 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VK055_1161 sapF; sapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VK055_3620 nikA; nickel ABC transporter, nickel/metallophore periplasmic binding protein K15584 nikA; nickel transport system substrate-binding protein
D VK055_3619 nikB; nickel ABC transporter, permease subunit NikB K15585 nikB; nickel transport system permease protein
D VK055_3618 nikC; nickel ABC transporter, permease subunit NikC K15586 nikC; nickel transport system permease protein
D VK055_3617 ABC transporter family protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D VK055_3616 nikE3; nickel import ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D VK055_1664 bacterial extracellular solute-binding, 5 Middlefamily protein K13889 gsiB; glutathione transport system substrate-binding protein
D VK055_1663 binding-protein-dependent transport system innermembrane component family protein K13890 gsiC; glutathione transport system permease protein
D VK055_1662 N-terminal TM domain of oligopeptide transport permease C family protein K13891 gsiD; glutathione transport system permease protein
D VK055_1665 nikE2; nickel import ATP-binding protein NikE K13892 gsiA; glutathione transport system ATP-binding protein
D VK055_4911 yejA K13893 yejA; microcin C transport system substrate-binding protein
D VK055_4910 yejB; yejB K13894 yejB; microcin C transport system permease protein
D VK055_4909 yejE K13895 yejE; microcin C transport system permease protein
D VK055_4908 nikE4; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D VK055_1926 fepB; periplasmic binding family protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D VK055_1928 fepD; fecCD transport family protein K23186 fepD; iron-siderophore transport system permease protein
D VK055_1929 fepG; fecCD transport family protein K23187 fepG; iron-siderophore transport system permease protein
D VK055_1930 fepC; ferric vibriobactin ABC transporter, ATP-bindingprotein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D VK055_2398 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VK055_2397 fecCD transport family protein K23228 fhuB; ferric hydroxamate transport system permease protein
D VK055_2399 fhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VK055_2392 yadT; periplasmic vitamin B12 binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D VK055_0287 btuC; btuC K06073 btuC; vitamin B12 transport system permease protein
D VK055_0290 btuD; vitamin B12 import ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VK055_0075 znuA; high-affinity zinc uptake system protein znuA K09815 znuA; zinc transport system substrate-binding protein
D VK055_0073 fecCD transport family protein K09816 znuB; zinc transport system permease protein
D VK055_0074 ABC transporter family protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VK055_4436 periplasmic solute binding family protein K11604 sitA; manganese/iron transport system substrate-binding protein
D VK055_4434 fecCD transport family protein K11605 sitC; manganese/iron transport system permease protein
D VK055_4433 ABC 3 transport family protein K11606 sitD; manganese/iron transport system permease protein
D VK055_4435 ABC transporter family protein K11607 sitB; manganese/iron transport system ATP-binding protein
D VK055_4339 cbiN; cobalt transport family protein K02009 cbiN; cobalt/nickel transport protein
D VK055_4338 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D VK055_4340 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D VK055_4341 cobalt ABC transporter, ATP-binding family protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D VK055_3964 putative sugar ABC transporter K10555 lsrB; AI-2 transport system substrate-binding protein
D VK055_3962 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D VK055_3963 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D VK055_3961 ccmA13; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D VK055_5031 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D VK055_5032 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D VK055_1348 lolE; liporeleasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VK055_1350 liporeleasing system, transmembrane, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D VK055_1349 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VK055_0396 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D VK055_0395 ccmC; ccmC K02195 ccmC; heme exporter protein C
D VK055_0394 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D VK055_0393 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VK055_2792 putative transmembrane possibly involved in transport conserved inner membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D VK055_2791 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D VK055_3866 lptB; lipopolysaccharide export system ATP-binding protein lptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VK055_3642 putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D VK055_3641 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VK055_5123 ybtP; ABC transporter family protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D VK055_5124 ybtQ; ABC transporter family protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D VK055_1543 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VK055_2141 ABC transporter family protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D VK055_2140 ABC transporter family protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D VK055_5102 iroC; lipid A export permease/ATP-binding protein MsbA K18895 iroC; ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
D VK055_2923 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D VK055_1568 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VK055_1567 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VK055_1574 macB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D VK055_4889 yojI K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:kpt02060]
D VK055_4748 PTS enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VK055_4749 ptsH; HPr K02784 ptsH; phosphocarrier protein HPr
D VK055_4747 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VK055_1366 ptsG; ptsG K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VK055_1831 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VK055_0994 phosphotransferase system, EIIC family protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_0995 PTS system, glucose-like IIB component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_2035 sacX; negative regulator of sacY activity K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VK055_4945 PTS system, beta-glucoside-specific IIABC component family protein K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D VK055_4463 PTS system, maltose and glucose-specific subfamily, IIC component domain protein K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D VK055_0799 PTS system, glucose-like IIB component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_3379 PTS system, alpha-glucoside-specific IIBC component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_3452 PTS system, glucose-like IIB component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_2812 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VK055_3422 phosphotransferase system, EIIC family protein K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VK055_0803 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VK055_3528 mtlA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VK055_0666 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_3107 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_3409 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_1225 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_4439 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_0665 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_3106 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_3411 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_2816 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_1228 licB; lichenan-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_4441 gmuB; oligo-beta-mannoside-specific phosphotransferaseenzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_0660 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_2612 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_3410 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_2814 celB2; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VK055_4274 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_1226 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VK055_4440 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_4442 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_0117 manX; manX K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D VK055_0116 manY; manY K02795 manY; mannose PTS system EIIC component
D VK055_0115 manZ; manZ K02796 manZ; mannose PTS system EIID component
D VK055_2631 putative PTS permease K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D VK055_2630 PTS system sorbose subIIB component family protein K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D VK055_2629 PTS system sorbose-specific iic component familyprotein K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D VK055_2628 PTS system mannose/fructose/sorbose IID component family protein K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D VK055_3068 PTS system, mannose/fructose/sorbose family, IIAcomponent domain protein K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D VK055_3069 manX2; manX K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D VK055_3070 manY2; manY K02814 sorA; sorbose PTS system EIIC component
D VK055_3071 manZ2; manZ K02815 sorM; sorbose PTS system EIID component
D VK055_1339 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D VK055_4477 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D VK055_4478 PTS system, glucitol/sorbitol-specific, IIBC component family protein K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D VK055_4479 srlA; PTS system, glucitol/sorbitol-specific, IIC component family protein K02783 srlA; glucitol/sorbitol PTS system EIIC component
D VK055_2303 PTS system sugar-specific permease component family protein K02775 gatC; galactitol PTS system EIIC component
D VK055_2202 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_2875 ulaC; ulaC K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_0747 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_2203 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_2876 sgaB; ulaB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_0748 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_2204 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D VK055_2877 ulaA; ulaA K03475 ulaA; ascorbate PTS system EIIC component
D VK055_0749 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D VK055_4922 phosphocarrier, HPr family protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VK055_0753 PTS system, Fru family, IIC component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VK055_4924 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VK055_0752 frwB; frwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VK055_0751 fruA; PTS system, fructose subfamily, IIA component domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VK055_4923 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VK055_4287 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VK055_3861 phosphocarrier, HPr family protein K08485 ptsO; phosphocarrier protein NPr
D VK055_3863 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:kpt03070]
D VK055_4025 tolC; tolC outer membrane channel K12340 tolC; outer membrane protein
D VK055_2408 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D VK055_2403 lipo, PulS/OutS family protein K02465 gspS; general secretion pathway protein S
D VK055_2407 gspC; type II secretion system protein C K02452 gspC; general secretion pathway protein C
D VK055_2410 gspF; type II secretion system protein F K02455 gspF; general secretion pathway protein F
D VK055_2411 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D VK055_2412 gspH; type II secretion system protein H K02457 gspH; general secretion pathway protein H
D VK055_2413 gspI; type II secretion system protein I K02458 gspI; general secretion pathway protein I
D VK055_2414 gspJ; type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D VK055_2415 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K
D VK055_2416 gspL; type II secretion system protein L K02461 gspL; general secretion pathway protein L
D VK055_2417 type II secretion system (T2SS), M family protein K02462 gspM; general secretion pathway protein M
D VK055_2409 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VK055_2419 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D VK055_2195 secD; secD K03072 secD; preprotein translocase subunit SecD
D VK055_2194 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VK055_3116 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VK055_3892 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VK055_3775 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VK055_2196 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D VK055_3358 oxaA; inner-membrane protein insertion factor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VK055_2469 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VK055_2470 secretion monitor family protein K13301 secM; secretion monitor
D VK055_3640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VK055_3517 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D VK055_4567 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VK055_3143 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D VK055_3142 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D VK055_1873 ybeC; tatE K03425 tatE; sec-independent protein translocase protein TatE
D VK055_5091 trbC/VIRB2 family protein K03197 virB2; type IV secretion system protein VirB2
D VK055_5089 type IV secretion system family protein K03200 virB5; type IV secretion system protein VirB5
D VK055_5085 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9
D VK055_5087 trbL/VirB6 plasmid conjugal transfer family protein K03201 virB6; type IV secretion system protein VirB6
D VK055_5086 virB8 family protein K03203 virB8; type IV secretion system protein VirB8
D VK055_5084 bacterial conjugation TrbI-like family protein K03195 virB10; type IV secretion system protein VirB10
D VK055_5090 type IV secretory pathway, VirB3-like family protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D VK055_5083 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D VK055_0186 vgrG2; valine-glycine repeat protein G K11904 vgrG; type VI secretion system secreted protein VgrG
D VK055_1099 vgrG; type VI secretion valine-glycine repeat protein G K11904 vgrG; type VI secretion system secreted protein VgrG
D VK055_0741 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D VK055_1101 hcp1; type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D VK055_0201 sciN2; type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D VK055_1089 sciN; type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D VK055_0198 icmF2; intracellular multiplication and human macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D VK055_1093 intracellular multiplication and human macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D VK055_0183 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D VK055_1103 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D VK055_1100 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:kpt02020]
D VK055_2215 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VK055_2216 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VK055_2229 phoA; alkaline phosphatase H K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VK055_3342 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VK055_1327 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D VK055_1326 transcriptional regulatory, C terminal family protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D VK055_5004 transcriptional regulatory, C terminal family protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D VK055_1253 pho; acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D VK055_3697 envZ; envZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VK055_3696 ompR; ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VK055_4885 ompC4; outer membrane protein C K09475 ompC; outer membrane pore protein C
D VK055_1527 ompC3; outer membrane protein C K09476 ompF; outer membrane pore protein F
D VK055_3258 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VK055_3257 cpxR; response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VK055_3944 hypothetical protein K25864 mzrA; modulator protein MzrA
D VK055_0987 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VK055_0985 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D VK055_2389 htrA; degP K04771 degP; serine protease Do [EC:3.4.21.107]
D VK055_2577 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D VK055_2578 transcriptional regulatory, C terminal family protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D VK055_4996 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D VK055_4995 transcriptional regulatory, C terminal family protein K07664 baeR; two-component system, OmpR family, response regulator BaeR
D VK055_5000 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D VK055_4999 MMPL family protein K07788 mdtB; multidrug efflux pump
D VK055_4998 MMPL family protein K07789 mdtC; multidrug efflux pump
D VK055_4997 major Facilitator Superfamily protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_4708 acrD; acrD K18324 acrD; multidrug efflux pump
D VK055_1725 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D VK055_1724 basR; transcriptional regulatory protein BasR K07771 basR; two-component system, OmpR family, response regulator BasR
D VK055_3623 arnB; UDP-L-Ara4O C-4' transaminase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D VK055_2703 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VK055_2704 copR; transcriptional activator protein CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VK055_2705 outer membrane factor of the CusCFBA copper/silver efflux system K07796 cusC; outer membrane protein, copper/silver efflux system
D VK055_2706 cusF; periplasmic copper/silver-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D VK055_2707 membrane fusion protein of the CusCFBA copper efflux system K07798 cusB; membrane fusion protein, copper/silver efflux system
D VK055_2708 cusA K07787 cusA; copper/silver efflux system protein
D VK055_4033 qseC; sensor protein qseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VK055_4034 qseB transcriptional activator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VK055_1817 kdpD, KdpD-Phis K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VK055_1819 transcriptional regulatory, C terminal family protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VK055_1814 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D VK055_1815 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D VK055_1816 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D VK055_3858 arcB; aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VK055_2575 arcA; arcA transcriptional dual regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VK055_3359 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VK055_5105 iroN; tonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D VK055_1213 tonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D VK055_3022 tonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D VK055_1934 fepA; tonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D VK055_2520 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VK055_2546 dpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VK055_2521 dpiA; dpiA-phosphorylated DNA binding transcriptional dual regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D VK055_2547 dpiA2; dpiA-phosphorylated DNA binding transcriptional dual regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D VK055_2541 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D VK055_2540 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D VK055_2539 citE; citrate (pro-3S)-lyase, beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D VK055_2538 citF; citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D VK055_2518 citX; holo-ACP synthase CitX K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D VK055_2537 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D VK055_0951 yjdH; sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration product K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D VK055_0953 response regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D VK055_3108 transporter, anaerobic C4-dicarboxylate uptake family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VK055_0636 malate dehydrogenase, NAD-requiring K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VK055_0235 HAMP domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D VK055_0233 narL; narL transcriptional dual regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VK055_0603 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0238 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0602 narH2; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0239 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0600 narI2; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0242 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0601 narJ2; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D VK055_0240 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D VK055_0616 molybdopterin oxidoreductase family protein K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D VK055_0617 formate dehydrogenase, alpha subunit K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D VK055_0618 fdxH2; formate dehydrogenase, beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D VK055_0619 formate dehydrogenase, gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit
D VK055_2912 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VK055_2913 frdB; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VK055_2914 frdC; fumarate reductase membrane protein K00246 frdC; succinate dehydrogenase subunit C
D VK055_2915 frdD; fumarate reductase membrane protein K00247 frdD; succinate dehydrogenase subunit D
D VK055_3395 uhpC; uhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VK055_1905 major Facilitator Superfamily protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VK055_3394 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VK055_3393 uhpA; uhpA transcriptional activator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D VK055_3396 phosphoglycerate transporter family protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D VK055_2356 putative regulator in colanic acid synthesis; interacts with RcsB K06080 rcsF; RcsF protein
D VK055_4882 his Kinase A domain protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D VK055_4884 putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D VK055_0023 rcsA; positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D VK055_4883 rcsB; rcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D VK055_4386 barA; hybrid sensory histidine kinase, in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VK055_0032 bacterial regulatory, luxR family protein K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VK055_0030 bacterial regulatory, luxR family protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D VK055_4488 global regulator family protein K03563 csrA; carbon storage regulator
D VK055_3989 evgS; evgS-Phis K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VK055_4177 evgS2; evgS-Phis K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VK055_3990 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4175 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4178 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4202 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4201 emrA Membrane Fusion Protein K07797 emrK; multidrug resistance protein K
D VK055_4200 H+ antiporter-2 family protein K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_2289 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_4231 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_4072 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_2995 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2927 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4230 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4244 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2288 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4532 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4535 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4073 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_0816 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2385 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D VK055_4623 glnB; regulatory protein P-II for glutamine synthetase K04751 glnB; nitrogen regulatory protein P-II 1
D VK055_3296 glnL; ntrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VK055_3297 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VK055_3295 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VK055_3089 his Kinase A domain protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VK055_3087 response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D VK055_3090 heavy-metal resistance family protein K07803 zraP; zinc resistance-associated protein
D VK055_4881 response regulator K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D VK055_4880 ctfA; butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D VK055_4879 atoA; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D VK055_4878 short chain fatty acid transporter family protein K02106 atoE; short-chain fatty acids transporter
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_3591 dctA; dctA dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D VK055_3865 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VK055_4620 putative sensory kinase in two-component system K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D VK055_4622 yfhA; response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D VK055_1853 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D VK055_1852 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D VK055_1851 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D VK055_1850 bacterial extracellular solute-binding, 3 familyprotein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D VK055_3731 crp; CRP transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VK055_0854 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D VK055_1308 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VK055_0551 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VK055_1790 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VK055_0778 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VK055_1307 cydB4; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VK055_0550 cydB2; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VK055_1789 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VK055_0777 cydB3; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VK055_1788 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D VK055_4025 tolC; tolC outer membrane channel K12340 tolC; outer membrane protein
D VK055_5015 wza; putative outer membrane lipoprotein Wza K01991 wza; polysaccharide biosynthesis/export protein
D VK055_5016 wzb; putative acid phosphatase Wzb K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VK055_5017 etk; tyrosine-protein kinase etk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VK055_3189 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VK055_3188 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VK055_1740 pemB; pectinesterase B K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D VK055_4078 orn/Lys/Arg decarboxylase, N-terminal domain protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:kpt02024]
D VK055_4498 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VK055_2894 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D VK055_1193 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VK055_1768 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VK055_0294 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VK055_4577 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VK055_4033 qseC; sensor protein qseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VK055_4034 qseB transcriptional activator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VK055_4620 putative sensory kinase in two-component system K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D VK055_4622 yfhA; response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D VK055_1819 transcriptional regulatory, C terminal family protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VK055_0030 bacterial regulatory, luxR family protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D VK055_3964 putative sugar ABC transporter K10555 lsrB; AI-2 transport system substrate-binding protein
D VK055_3962 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D VK055_3963 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D VK055_3961 ccmA13; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D VK055_3959 lsrK; autoinducer 2 kinase lsrK K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D VK055_3960 lsrR transcriptional repressor K11531 lsrR; lsr operon transcriptional repressor
D VK055_3965 deoC/LacD aldolase family protein K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D VK055_3966 autoinducer 2-degrading protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D VK055_4669 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D VK055_4671 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D VK055_0553 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VK055_0556 binding-protein-dependent transport system innermembrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VK055_3010 binding-protein-dependent transport system innermembrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VK055_0555 binding-protein-dependent transport system innermembrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VK055_3011 binding-protein-dependent transport system innermembrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VK055_0554 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VK055_0165 ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_2251 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_3647 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_3650 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_0166 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_2252 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_3651 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_2253 livM; branched-chain amino-acid ABC transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_0167 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_3652 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_0168 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_2254 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_3653 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_2255 livF; branched-chain amino-acid ABC transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_0169 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_3654 livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_0758 metallo-beta-lactamase superfamily protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D VK055_0023 rcsA; positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D VK055_0128 fadD; fadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VK055_3731 crp; CRP transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VK055_3038 zur; zur transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VK055_1178 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VK055_2188 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VK055_0565 putative inner membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D VK055_3425 putative efflux pump outer membrane protein ttgC K18139 oprM; outer membrane protein, multidrug efflux system
D VK055_1024 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D VK055_0258 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_1485 oppA2; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_1136 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_0259 oppB; oppB K15581 oppB; oligopeptide transport system permease protein
D VK055_0260 binding-protein-dependent transport system innermembrane component family protein K15582 oppC; oligopeptide transport system permease protein
D VK055_0261 oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VK055_0262 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VK055_1955 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_0456 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_0630 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_4188 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_1974 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_4988 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_0455 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_0629 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_4187 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_1956 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_1973 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_4989 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_1972 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_0454 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_0628 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_4186 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_1957 N-terminal TM domain of oligopeptide transport permease C family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_4990 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_0627 nikE; nickel import ATP-binding protein NikE K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_0453 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_1970 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_4991 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_4185 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_1958 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_4992 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_1971 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_4184 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_0452 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_1959 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_3358 oxaA; inner-membrane protein insertion factor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VK055_3116 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VK055_3892 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VK055_3775 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VK055_2196 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D VK055_2469 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VK055_3640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VK055_3517 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D VK055_4567 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:kpt02030]
D VK055_3051 malE; malE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VK055_3317 rbsB K10439 rbsB; ribose transport system substrate-binding protein
D VK055_2980 periplasmic binding and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D VK055_1892 ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit K10439 rbsB; ribose transport system substrate-binding protein
D VK055_0767 periplasmic binding and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D VK055_4935 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VK055_3568 dppA K12368 dppA; dipeptide transport system substrate-binding protein
D VK055_0563 dppA K12368 dppA; dipeptide transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:kpt02040]
D VK055_0026 bacterial extracellular solute-binding, 3 familyprotein K02424 tcyA; L-cystine transport system substrate-binding protein
D VK055_3995 sigma70 factor RNA polymerase, sigma 70 (sigma D) factor K03086 rpoD; RNA polymerase primary sigma factor
D VK055_3865 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D VK055_4391 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:kpt04980]
D VK055_3976 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VK055_3075 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:kpt01501]
D VK055_1527 ompC3; outer membrane protein C K09476 ompF; outer membrane pore protein F
D VK055_4885 ompC4; outer membrane protein C K09475 ompC; outer membrane pore protein C
D VK055_2159 ampG; ampG muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VK055_1361 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VK055_0258 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_1485 oppA2; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_1136 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_0259 oppB; oppB K15581 oppB; oligopeptide transport system permease protein
D VK055_0260 binding-protein-dependent transport system innermembrane component family protein K15582 oppC; oligopeptide transport system permease protein
D VK055_0261 oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VK055_0262 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VK055_3427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_2105 acrA; acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_3426 acrB3; acrB RND-type permease K18138 acrB; multidrug efflux pump
D VK055_2106 acrB; acrB RND-type permease K18138 acrB; multidrug efflux pump
D VK055_1978 bepE; efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VK055_3425 putative efflux pump outer membrane protein ttgC K18139 oprM; outer membrane protein, multidrug efflux system
D VK055_1024 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D VK055_4025 tolC; tolC outer membrane channel K12340 tolC; outer membrane protein
D VK055_3704 peptidoglycan synthetase penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VK055_0673 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VK055_1865 mrdA2; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VK055_2484 ftsI2; essential cell division FtsI; penicillin-bindingprotein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VK055_0111 ftsI; essential cell division FtsI; penicillin-bindingprotein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VK055_0891 bla; beta-lactamase SHV-24 K18699 blaSHV; beta-lactamase class A SHV [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:kpt01502]
D VK055_2475 ddlB; ddlB K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VK055_2233 D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VK055_3031 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VK055_0144 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VK055_2482 UDP-MurNAc-L-Ala-D-Glu-L-Lys:D-Ala-D-Ala ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VK055_2481 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VK055_2477 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:kpt01503]
D VK055_1327 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D VK055_1326 transcriptional regulatory, C terminal family protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D VK055_5004 transcriptional regulatory, C terminal family protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D VK055_3565 sulfatase family protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D VK055_1877 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D VK055_3623 arnB; UDP-L-Ara4O C-4' transaminase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D VK055_3624 arnC; undecaprenyl phosphate-L-Ara4FN transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D VK055_3625 arnA; fused UDP-L-Ara4N formyltransferase and UDP-GlcAC-4''-decarboxylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D VK055_3626 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D VK055_3627 arnT; 4-amino-4-deoxy-L-arabinose (L-Ara4N) transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D VK055_3628 hypothetical protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D VK055_3630 arnF; arnF K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D VK055_5133 polymyxin resistance PmrD family protein K19238 pmrD; signal transduction protein PmrD
D VK055_1725 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D VK055_1724 basR; transcriptional regulatory protein BasR K07771 basR; two-component system, OmpR family, response regulator BasR
D VK055_1723 sulfatase family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VK055_1157 bacterial extracellular solute-binding, 5 Middlefamily protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VK055_1158 binding-protein-dependent transport system innermembrane component family protein K19227 sapB; cationic peptide transport system permease protein
D VK055_1159 N-terminal TM domain of oligopeptide transport permease C family protein K19228 sapC; cationic peptide transport system permease protein
D VK055_1160 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VK055_1161 sapF; sapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VK055_2360 nlpE N-terminal domain protein K06079 cutF; copper homeostasis protein (lipoprotein)
D VK055_3258 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VK055_3257 cpxR; response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VK055_2897 amiB; N-acetylmuramoyl-L-alanine amidase 2 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_4300 amiC; N-acetylmuramyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_4733 N-acetylmuramoyl-L-alanine amidase 1 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_1353 putative L,D-transpeptidase YcfS K19236 ycfS; L,D-transpeptidase YcfS
D VK055_2389 htrA; degP K04771 degP; serine protease Do [EC:3.4.21.107]
D VK055_3303 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VK055_1426 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VK055_3725 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VK055_0871 marA; bacterial regulatory helix-turn-helix, AraC family protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_3427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_2105 acrA; acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_3426 acrB3; acrB RND-type permease K18138 acrB; multidrug efflux pump
D VK055_2106 acrB; acrB RND-type permease K18138 acrB; multidrug efflux pump
D VK055_1978 bepE; efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VK055_4025 tolC; tolC outer membrane channel K12340 tolC; outer membrane protein
D VK055_2371 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:kpt01000]
C 01001 Protein kinases [BR:kpt01001]
D VK055_0819 hipA; serine/threonine kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VK055_1112 histidine kinase-like ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D VK055_5017 etk; tyrosine-protein kinase etk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VK055_2215 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VK055_1327 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D VK055_3697 envZ; envZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VK055_0987 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VK055_3258 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VK055_2577 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D VK055_4996 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D VK055_1725 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D VK055_2703 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VK055_4033 qseC; sensor protein qseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VK055_1817 kdpD, KdpD-Phis K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VK055_3858 arcB; aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VK055_0235 HAMP domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D VK055_3394 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VK055_4884 putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D VK055_4882 his Kinase A domain protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D VK055_4386 barA; hybrid sensory histidine kinase, in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VK055_3989 evgS; evgS-Phis K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VK055_4177 evgS2; evgS-Phis K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VK055_2520 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VK055_2546 dpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VK055_0951 yjdH; sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration product K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D VK055_4776 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VK055_4960 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VK055_3296 glnL; ntrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VK055_3089 his Kinase A domain protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VK055_4881 response regulator K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D VK055_4620 putative sensory kinase in two-component system K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:kpt01009]
D VK055_5058 S-adenosyl-L-homocysteine hydrolase, NAD bindingdomain protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D VK055_3254 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VK055_2094 htpG; htpG K04079 HSP90A; molecular chaperone HtpG
D VK055_2588 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:kpt01002]
D VK055_2553 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D VK055_2419 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D VK055_3752 type IV leader peptidase family protein K02506 hofD; leader peptidase HopD [EC:3.4.23.43]
D VK055_4461 hycI; hydrogenase maturation peptidase HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D VK055_1804 pcp2; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D VK055_0675 glutamine amidotransferase class-I family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VK055_0707 glutamine amidotransferase class-I family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VK055_4666 guaA; guaA GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VK055_1457 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D VK055_2923 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D VK055_4913 nlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D VK055_0483 hypothetical protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D VK055_0291 nlpC/P60 family protein K13695 nlpC; probable lipoprotein NlpC
D VK055_2277 nlpC/P60 family protein K13695 nlpC; probable lipoprotein NlpC
D VK055_4811 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VK055_3853 glutamate synthase (NADPH) large chain glutamatesynthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VK055_3341 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VK055_1836 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VK055_3917 yfkM; general stress protein 18 K05520 yhbO; deglycase [EC:3.5.1.124]
D VK055_1108 intracellular protease, PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D VK055_2177 hypothetical protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D VK055_5141 putative L,D-transpeptidase ErfK/SrfK K16291 erfK; L,D-transpeptidase ErfK/SrfK
D VK055_0325 putative L,D-transpeptidase YcfS K19234 ynhG; L,D-transpeptidase YnhG
D VK055_1678 putative L,D-transpeptidase YbiS K19235 ybiS; L,D-transpeptidase YbiS
D VK055_1353 putative L,D-transpeptidase YcfS K19236 ycfS; L,D-transpeptidase YcfS
D VK055_1531 L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D VK055_1519 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VK055_3607 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D VK055_0909 peptidase M3 family protein K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D VK055_4295 peptidase M16 inactive domain protein K01407 ptrA; protease III [EC:3.4.24.55]
D VK055_2794 pepA; pepA Transcriptional Repressor, Aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VK055_4646 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VK055_0680 dipeptidase AC. Metallo peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D VK055_0761 peptidase, ArgE/DapE family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VK055_4706 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VK055_1329 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VK055_2317 pepD K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VK055_2021 amidohydrolase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D VK055_1153 amidohydrolase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D VK055_0969 iaaH; indole-3-acetyl-aspartic acid hydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D VK055_0970 amidohydrolase family protein K12941 abgB; aminobenzoyl-glutamate utilization protein B
D VK055_0728 amidase, hydantoinase/carbamoylase family protein K02083 allC; allantoate deiminase [EC:3.5.3.9]
D VK055_0076 putative peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VK055_2384 map2; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D VK055_0812 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D VK055_3134 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D VK055_4139 pepP; pepP K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VK055_4400 M42 glutamyl aminopeptidase family protein K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D VK055_0930 mcar-1; metallocarboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D VK055_3889 hflB; ftsH HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VK055_0104 htpX; heat shock, integral membrane protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D VK055_4124 putative peptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D VK055_4694 peptidase M48 family protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D VK055_2376 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D VK055_4795 mepA; mepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D VK055_5144 mtfA2; protein mtfA K09933 mtfA; MtfA peptidase
D VK055_0934 trypsin family protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D VK055_2389 htrA; degP K04771 degP; serine protease Do [EC:3.4.21.107]
D VK055_3844 peptidase Do family protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D VK055_3843 degS; periplasmic serine peptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D VK055_0087 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VK055_1655 dacC2; penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_1868 dacC; penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_5052 DD-carboxypeptidase, penicillin-binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_4951 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D VK055_2239 yaiH; penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D VK055_3885 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VK055_2154 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D VK055_2152 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D VK055_2741 lon protease (S16) C-terminal proteolytic domainprotein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D VK055_1503 AAA domain protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D VK055_3042 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D VK055_1278 umuD; SOS mutagenesis error-prone repair processed to UmuD' forms complex with UmuC K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D VK055_4608 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VK055_0103 tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VK055_1255 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D VK055_1184 peptidase S49 family protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D VK055_3681 glpG; rhomboid family protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D VK055_0146 L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D VK055_5173 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D VK055_3250 hslV; ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D VK055_1666 iaaA K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VK055_3663 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VK055_0721 putative gamma-glutamyltransferase ywrD K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D VK055_4994 peptidase U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VK055_0546 putative peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D VK055_3912 peptidase U32 family protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D VK055_3913 putative peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D VK055_2834 modulator of DNA gyrase family protein K03592 pmbA; PmbA protein
D VK055_3824 modulator of DNA gyrase family protein K03568 tldD; TldD protein
D VK055_4893 ecotin family protein K08276 eco; ecotin
D VK055_4650 alpha-2-macroglobulin MG1 domain protein K06894 yfhM; alpha-2-macroglobulin
D VK055_2891 hflC; hflC protein K04087 hflC; modulator of FtsH protease HflC
D VK055_2892 hflK; hflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:kpt01003]
D VK055_3676 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D VK055_3576 bcsA; cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D VK055_3586 celA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D VK055_3860 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VK055_4651 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D VK055_2402 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VK055_3704 peptidoglycan synthetase penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VK055_5020 glycosyl transferases group 1 family protein K21001 pslH; polysaccharide biosynthesis protein PslH
D VK055_3180 glycosyltransferase, WecB/TagA/CpsF family protein K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D VK055_3182 wecF; 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D VK055_3191 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VK055_1403 mdoH; membrane glycosyltransferase synthesis of membrane-derived oligosaccharide K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D VK055_2950 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D VK055_0055 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:kpt01005]
D VK055_2371 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VK055_2370 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VK055_2471 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosaminedeacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VK055_2373 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VK055_2067 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VK055_1542 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VK055_2055 lpxL3; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VK055_1399 lpxL2; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VK055_0077 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VK055_4523 aspartyl/Asparaginyl beta-hydroxylase family protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D VK055_1295 lpxL; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D VK055_4914 protein with low undecaprenyl pyrophosphate phosphatase activity K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D VK055_3497 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VK055_3627 arnT; 4-amino-4-deoxy-L-arabinose (L-Ara4N) transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D VK055_1877 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D VK055_1723 sulfatase family protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VK055_3565 sulfatase family protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D VK055_0220 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VK055_1539 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VK055_3869 yrbI; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D VK055_3870 putative isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VK055_3506 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D VK055_3496 glycosyl transferase 2 family protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D VK055_3507 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VK055_3500 glycosyl transferases group 1 family protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D VK055_3498 glycosyl transferase 2 family protein K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D VK055_3501 putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D VK055_2330 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VK055_2352 yaeD; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VK055_4017 rfaE; bifunctional protein RfaE, domain I K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VK055_3508 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VK055_3181 wzyE family protein K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D VK055_3191 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:kpt01011]
D VK055_3878 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VK055_3124 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VK055_2476 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VK055_2480 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VK055_2483 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VK055_2475 ddlB; ddlB K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VK055_2233 D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VK055_3031 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VK055_0144 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VK055_3220 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VK055_0146 L,D-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D VK055_2481 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VK055_2477 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VK055_4011 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VK055_1653 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VK055_1385 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D VK055_3704 peptidoglycan synthetase penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VK055_2402 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VK055_4651 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D VK055_0673 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VK055_1865 mrdA2; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VK055_2484 ftsI2; essential cell division FtsI; penicillin-bindingprotein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VK055_0111 ftsI; essential cell division FtsI; penicillin-bindingprotein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VK055_1655 dacC2; penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_1868 dacC; penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_5052 DD-carboxypeptidase, penicillin-binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VK055_3885 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VK055_2239 yaiH; penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D VK055_4951 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D VK055_3860 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VK055_5141 putative L,D-transpeptidase ErfK/SrfK K16291 erfK; L,D-transpeptidase ErfK/SrfK
D VK055_0325 putative L,D-transpeptidase YcfS K19234 ynhG; L,D-transpeptidase YnhG
D VK055_1678 putative L,D-transpeptidase YbiS K19235 ybiS; L,D-transpeptidase YbiS
D VK055_1353 putative L,D-transpeptidase YcfS K19236 ycfS; L,D-transpeptidase YcfS
D VK055_1531 L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D VK055_4795 mepA; mepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D VK055_0483 hypothetical protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D VK055_4913 nlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D VK055_0076 putative peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VK055_2584 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VK055_4347 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D VK055_4480 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D VK055_4080 hypothetical protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D VK055_2340 lysM domain protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D VK055_0147 mltE; lytic murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D VK055_4617 yfhD; membrane-bound lytic murein transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D VK055_1370 yceG-like family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D VK055_1867 rlpA; rare lipoA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VK055_2897 amiB; N-acetylmuramoyl-L-alanine amidase 2 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_4300 amiC; N-acetylmuramyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_4733 N-acetylmuramoyl-L-alanine amidase 1 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_1586 putative amidase and lipoprotein K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_2459 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_0326 lpp; murein lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:kpt01004]
D VK055_1375 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VK055_1376 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VK055_4800 fabB; fabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VK055_1372 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VK055_0712 fabF2; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VK055_1374 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_0788 fabG2; 3-oxoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_2301 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_1916 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VK055_1504 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VK055_2372 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VK055_1165 fabI; NADH-dependent enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VK055_2076 tesA; tesA K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VK055_2137 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VK055_1214 yciA; acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D VK055_2147 acyl-CoA thioester hydrolase, YbgC/YbaW family protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D VK055_5120 irp1; methyltransferase domain protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D VK055_5121 irp2; amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D VK055_2990 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VK055_0128 fadD; fadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VK055_3044 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VK055_1377 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VK055_4009 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VK055_4038 1-acylglycerol-3-phosphate O-acyltransferases domain protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:kpt01008]
D VK055_1923 entB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D VK055_1935 entD; 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D VK055_1924 entE; (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D VK055_1931 entF; amino acid adenylation domain protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D VK055_1921 ybdB2; proofreading thioesterase in enterobactin biosynthesis K24147 entH; proofreading thioesterase EntH
D VK055_5120 irp1; methyltransferase domain protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D VK055_5121 irp2; amino acid adenylation domain protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D VK055_5117 ybtE; 2,3-dihydroxybenzoate-AMP ligase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D VK055_5119 ybtU; thiazolinyl imide reductase family protein K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D VK055_5118 ybtT; alpha/beta hydrolase family protein K05374 irp4; yersiniabactin synthetase, thioesterase component
C 01006 Prenyltransferases [BR:kpt01006]
D VK055_2181 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VK055_3880 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VK055_2378 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VK055_2895 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VK055_3252 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VK055_3045 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VK055_2164 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:kpt01007]
D VK055_4762 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VK055_1830 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VK055_2424 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VK055_0502 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VK055_2689 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VK055_3715 trpS2; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VK055_2065 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VK055_0059 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VK055_4963 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VK055_2554 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VK055_2796 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VK055_1858 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VK055_4164 lysS2; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VK055_2049 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VK055_0067 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VK055_1526 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VK055_4656 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VK055_3546 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VK055_3547 glyS; glycyl-tRNA synthetase, &beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VK055_1560 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VK055_2358 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VK055_0276 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VK055_4487 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VK055_2548 threonyl and Alanyl tRNA synthetase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VK055_0280 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VK055_0281 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VK055_1528 aspC; aspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VK055_3533 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VK055_4834 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VK055_4778 putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D VK055_1071 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_3030 tyrB2; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VK055_1888 methionine aminotransferase, PLP-dependent K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D VK055_1075 aminotransferase class I and II family protein K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D VK055_5043 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VK055_3509 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VK055_1730 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VK055_0996 aminotransferase class I and II family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VK055_3730 argD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VK055_1016 astC K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D VK055_1237 astC K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D VK055_2311 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VK055_3645 gabT2; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D VK055_0687 dat; diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VK055_3967 ygjG; putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D VK055_1732 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VK055_2396 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VK055_3206 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VK055_3402 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VK055_1549 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VK055_0727 pucG; purine catabolism protein pucG K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D VK055_3623 arnB; UDP-L-Ara4O C-4' transaminase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D VK055_3184 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase familyprotein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:kpt00194]
D VK055_3337 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VK055_3336 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VK055_3335 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VK055_3334 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VK055_3333 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VK055_3332 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VK055_3331 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VK055_3330 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VK055_3329 ATP synthase I chain family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:kpt03000]
D VK055_0016 dcm; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_5150 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_2510 araC; araC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D VK055_2853 araC3; araC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D VK055_2658 hpaA; 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D VK055_3262 bacterial regulatory helix-turn-helix, AraC family protein K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D VK055_3263 cupin domain protein K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D VK055_1224 chbR transcriptional regulator ChbR transcriptional dual regulator K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D VK055_4731 bacterial regulatory helix-turn-helix, AraC family protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D VK055_5122 ybtA; bacterial regulatory helix-turn-helix, AraC family protein K05372 ybtA; AraC family transcriptional regulator
D VK055_0484 bacterial regulatory helix-turn-helix, AraC family protein K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_3007 soxS; bacterial regulatory helix-turn-helix, AraC family protein K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_0871 marA; bacterial regulatory helix-turn-helix, AraC family protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_2581 rob; bacterial regulatory helix-turn-helix, AraC family protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_4553 rarA; bacterial regulatory helix-turn-helix, AraC family protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_3021 bacterial regulatory helix-turn-helix, AraC family protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D VK055_1983 ramA; bacterial regulatory helix-turn-helix, AraC family protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D VK055_1047 feaR transcriptional regulator FeaR transcriptional activator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D VK055_2616 bacterial regulatory helix-turn-helix, AraC family protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D VK055_3436 cupin domain protein K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D VK055_2962 cupin domain protein K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D VK055_1283 bacterial regulatory helix-turn-helix, AraC family protein K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D VK055_4325 bacterial regulatory helix-turn-helix, AraC family protein K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D VK055_4036 bacterial regulatory helix-turn-helix, AraC family protein K13652 K13652; AraC family transcriptional regulator
D VK055_0543 bacterial regulatory helix-turn-helix, AraC family protein K07506 K07506; AraC family transcriptional regulator
D VK055_3476 methylated-DNA-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D VK055_4887 ada transcriptional dual regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D VK055_0883 bacterial regulatory helix-turn-helix, AraC family protein K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D VK055_1189 bacterial regulatory helix-turn-helix, lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VK055_1948 bacterial regulatory helix-turn-helix, lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VK055_0785 gcvA; gcvA transcriptional dual regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VK055_4352 gcvA2; gcvA transcriptional dual regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VK055_5068 bacterial regulatory helix-turn-helix, lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VK055_3204 bacterial regulatory helix-turn-helix, lysR family protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D VK055_2557 nhaR; nhaR transcriptional activator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VK055_3225 bacterial regulatory helix-turn-helix, lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VK055_4132 iciA; argP transcriptional activator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VK055_2491 bacterial regulatory helix-turn-helix, lysR family protein K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D VK055_0160 bacterial regulatory helix-turn-helix, lysR family protein K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D VK055_4781 cynR transcriptional dual regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D VK055_1181 cysB; cysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D VK055_5140 cbl transcriptional activator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D VK055_3386 dsdC; D-serine deaminase transcriptional activator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D VK055_1144 bacterial regulatory helix-turn-helix, lysR family protein K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D VK055_0946 bacterial regulatory helix-turn-helix, lysR family protein K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D VK055_0968 bacterial regulatory helix-turn-helix, lysR family protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D VK055_1460 putative DNA-binding transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D VK055_0416 bacterial regulatory helix-turn-helix, lysR family protein K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D VK055_3414 bacterial regulatory helix-turn-helix, lysR family protein K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D VK055_4555 bacterial regulatory helix-turn-helix, lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VK055_1081 bacterial regulatory helix-turn-helix, lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VK055_1276 bacterial regulatory helix-turn-helix, lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VK055_5139 nac transcriptional activator Nac transcriptional dual regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D VK055_0170 putative transcriptional regulator LYSR-type K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D VK055_3825 qseA; quorum sensing transcriptional regulator of LYSR-type K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D VK055_3212 hdfR; hdfR transcriptional regulator HdfR transcriptional repressor K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D VK055_1654 deoR-like helix-turn-helix domain protein K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D VK055_3682 glpR; glpR transcriptional repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VK055_1064 bacterial regulatory, arsR family protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VK055_4355 deoR C terminal sensor domain protein K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D VK055_4474 deoR C terminal sensor domain protein K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D VK055_2880 ulaR; ulaR transcriptional repressor K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D VK055_2116 lacI2; lacI transcriptional repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D VK055_0886 lacI; lacI transcriptional repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D VK055_3314 rbsR; rbsR transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VK055_0695 bacterial regulatory, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VK055_0766 helix-turn-helix family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VK055_2043 bacterial regulatory, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VK055_3275 rafR; HTH-type transcriptional regulator rafR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VK055_3536 bacterial regulatory helix-turn-helix, AraC family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VK055_4277 galR; galR transcriptional repressor GalR transcriptional dual regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VK055_4934 galR2; galR transcriptional repressor GalR transcriptional dual regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VK055_3558 periplasmic binding and sugar binding domain of LacI family protein K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D VK055_3248 cytR; cytR transcriptional dual regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D VK055_2488 D-fructose-responsive transcription factor family protein K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D VK055_4981 helix-turn-helix family protein K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D VK055_2037 D-fructose-responsive transcription factor family protein K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D VK055_2811 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D VK055_4465 ascG transcriptional repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D VK055_0480 periplasmic binding and sugar binding domain of LacI family protein K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D VK055_3668 periplasmic binding and sugar binding domain of LacI family protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D VK055_0993 periplasmic binding and sugar binding domain of LacI family protein K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D VK055_0798 putative transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D VK055_3377 putative transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D VK055_1679 bacterial regulatory, gntR family protein K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D VK055_2966 phnF; phosphonate metabolism transcriptional regulatorPhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D VK055_1737 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D VK055_0140 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D VK055_2453 pdhR; pdhR transcriptional dual regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VK055_4276 uxuR transcriptional repressor K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D VK055_3946 uxuR transcriptional repressor K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D VK055_3522 pdhR2; pdhR transcriptional dual regulator K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D VK055_3366 bacterial regulatory, gntR family protein K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D VK055_1967 bacterial regulatory, gntR family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VK055_2111 bacterial regulatory, gntR family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VK055_3644 bacterial regulatory, gntR family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VK055_4515 bacterial regulatory, gntR family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VK055_2313 ygaE; csiR transcriptional repressor K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D VK055_0911 putative DNA-binding transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D VK055_2635 putative DNA-binding transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
D VK055_1951 betI; transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D VK055_2104 acrR; acrR transcriptional regulator AcrR transcriptional repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D VK055_3488 ttk; cell division inhibitor K05501 slmA; TetR/AcrR family transcriptional regulator
D VK055_1437 rutR transcriptional dual regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D VK055_0489 ydhM; nemR DNA binding transcriptional repressor K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VK055_5136 regulatory protein TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VK055_0316 bacterial regulatory, tetR family protein K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D VK055_3804 putative transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D VK055_1086 bacterial regulatory, tetR family protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D VK055_1356 bacterial regulatory, tetR family protein K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D VK055_3224 fabR; fabR transcriptional repressor FabR transcriptional dual regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D VK055_1707 ybiH; transcriptional repressor K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D VK055_1649 bacterial regulatory, tetR family protein K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D VK055_3325 asnC; asnC transcriptional repressor AsnC transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D VK055_0243 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VK055_1564 lrp; lrp transcriptional dual regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VK055_1525 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VK055_2142 asnC family protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D VK055_0030 bacterial regulatory, luxR family protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D VK055_2267 bacterial regulatory, luxR family protein K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D VK055_0023 rcsA; positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D VK055_4096 bacterial regulatory, luxR family protein K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D VK055_2614 bglJ; bglJ transcriptional regulator domain protein K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D VK055_3683 bacterial regulatory, luxR family protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D VK055_0870 marR; marR family protein K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D VK055_0496 slyA; transcriptional regulator slyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D VK055_1021 bacterial regulatory, gntR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D VK055_2679 marR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D VK055_4504 emrR; emrR transcriptional repressor MprA transcriptional repressor K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D VK055_4417 marR family protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D VK055_2082 cueR; cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VK055_3781 zntR; zn(II)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D VK055_3005 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D VK055_2711 merR regulatory family protein K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D VK055_1750 putative transcriptional regulator predicted DNA-binding transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
D VK055_1825 fur; fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VK055_3038 zur; zur transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VK055_3076 iclR; iclR transcriptional repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D VK055_0606 bacterial transcriptional regulator family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D VK055_0967 beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D VK055_2166 bacterial transcriptional regulator family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D VK055_0338 bacterial transcriptional regulator family protein K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D VK055_0106 kdgR; kdgR transcriptional repressor K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D VK055_3731 crp; CRP transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VK055_0974 etrA; electron transport regulator A K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D VK055_4638 iscR; iscR transcriptional regulator IscR transcriptional dual regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D VK055_2886 nsrR; nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D VK055_4550 transcriptional regulator family protein K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB
D VK055_4215 arsR; arsR transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VK055_0544 transcriptional regulator, HTH_3 family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D VK055_1682 mntR transcriptional repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D VK055_0445 helix-turn-helix domain, rpiR family protein K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D VK055_0079 helix-turn-helix domain, rpiR family protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D VK055_2817 helix-turn-helix domain, rpiR family protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D VK055_3123 biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VK055_3805 fis; fis transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VK055_2582 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D VK055_3879 winged helix-turn-helix DNA-binding family protein K07724 ner; Ner family transcriptional regulator
D VK055_2505 sgrR transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator
D VK055_2586 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D VK055_1458 ycjC; DNA-binding transcriptional repressor K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D VK055_0820 hipB Polypeptide K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D VK055_2010 helix-turn-helix family protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D VK055_2632 AAA domain family protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D VK055_4527 AAA domain family protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VK055_4473 norR transcriptional activator NorR transcriptional dual regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D VK055_4446 fhlA transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D VK055_2388 cdaR; cdaR transcriptional activator K02647 cdaR; carbohydrate diacid regulator
D VK055_1761 molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein
D VK055_0589 helix-turn-helix family protein K07726 K07726; putative transcriptional regulator
D VK055_3398 helix-turn-helix family protein K07726 K07726; putative transcriptional regulator
D VK055_3551 helix-turn-helix family protein K07726 K07726; putative transcriptional regulator
D VK055_3615 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D VK055_3244 met Apo-repressor, MetJ family protein K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D VK055_1436 putA bifunctional enzyme and transcriptional regulator PutA transcriptional repressor, Proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VK055_2821 relB; qin prophage antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D VK055_4944 PRD domain protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D VK055_0525 metal-sensitive transcriptional repressor familyprotein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D VK055_2128 rcnR; rcnR transcriptional repressor K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D VK055_2157 bolA; bolA transcriptional regulator BolA transcriptional dual regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D VK055_5153 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VK055_2299 glycerol-3-phosphate responsive antiterminator family protein K02443 glpP; glycerol uptake operon antiterminator
D VK055_3141 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D VK055_3832 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D VK055_1834 transcriptional regulator, ROK family K02565 nagC; N-acetylglucosamine repressor
D VK055_0926 mlc; dgsA transcriptional repressor K15545 mlc; transcriptional regulator of PTS gene
D VK055_3525 mannitol operon repressor K02562 mtlR; mannitol operon repressor
D VK055_0691 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D VK055_1142 tyrR; tyrR transcriptional dual regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D VK055_2053 cadC transcriptional activator K03765 cadC; transcriptional activator of cad operon
D VK055_4698 gcvR GcvR predicted transcriptional regulator K03567 gcvR; glycine cleavage system transcriptional repressor
D VK055_1030 paaX; phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D VK055_1152 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D VK055_1148 pspC; phage shock protein C K03973 pspC; phage shock protein C
D VK055_3960 lsrR transcriptional repressor K11531 lsrR; lsr operon transcriptional repressor
D VK055_3977 dhaR transcriptional dual regulator K05880 dhaR; transcriptional activator for dhaKLM operon
D VK055_1880 rnk; prokaryotic transcription elongation factor GreA/GreB K06140 rnk; regulator of nucleoside diphosphate kinase
D VK055_2762 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D VK055_4098 hypothetical protein K07735 algH; putative transcriptional regulator
D VK055_2423 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D VK055_2189 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D VK055_2314 crl transcriptional regulator K11926 crl; sigma factor-binding protein Crl
D VK055_2487 mraZ family protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:kpt03021]
D VK055_3778 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VK055_3110 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VK055_3109 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VK055_3471 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VK055_3995 sigma70 factor RNA polymerase, sigma 70 (sigma D) factor K03086 rpoD; RNA polymerase primary sigma factor
D VK055_4413 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VK055_4603 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VK055_3643 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D VK055_3865 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VK055_2516 DEAD/DEAH box helicase family protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D VK055_3901 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D VK055_2186 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D VK055_3115 nusG; transcription termination/antitermination factorNusG K02601 nusG; transcription termination/antitermination protein NusG
D VK055_3849 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D VK055_3850 stringent starvation B family protein K03600 sspB; stringent starvation protein B
D VK055_1114 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D VK055_1482 anti-anti-sigma factor family protein K04749 rsbV; anti-sigma B factor antagonist
D VK055_1113 anti-anti-sigma factor family protein K04749 rsbV; anti-sigma B factor antagonist
D VK055_1112 histidine kinase-like ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D VK055_4604 rseA; anti-sigma factor that inhibits sigmaE anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D VK055_4605 mucB/RseB family protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D VK055_4606 positive regulator of sigma(E), RseC/MucC familyprotein K03803 rseC; sigma-E factor negative regulatory protein RseC
D VK055_2423 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D VK055_3886 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D VK055_3695 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D VK055_3192 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VK055_2363 yaeO; modulator of Rho-dependent transcription termination K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:kpt03019]
D VK055_1382 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VK055_3822 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D VK055_4609 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VK055_2885 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VK055_2906 yjeR; oligoribonuclease monomer K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VK055_3194 rhlB; ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VK055_1700 DEAD-box-containing ATP-dependent RNA helicase family member K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VK055_3909 csdA, DEAD-box RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VK055_3158 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VK055_4391 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VK055_3907 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VK055_3192 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VK055_3254 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VK055_2560 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VK055_2930 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VK055_2894 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D VK055_4684 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VK055_0622 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VK055_2425 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D VK055_4286 nudH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VK055_4488 global regulator family protein K03563 csrA; carbon storage regulator
D VK055_3817 EAL domain protein K18765 csrD; RNase E specificity factor CsrD
D VK055_3253 rraA; regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D VK055_2799 yjgD; ribonuclease E inhibitor protein B K09893 rraB; regulator of ribonuclease activity B
D VK055_3862 putative P-loop containing ATPase K06958 rapZ; RNase adapter protein RapZ
D VK055_1026 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D VK055_2420 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:kpt03011]
D VK055_1546 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D VK055_2383 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D VK055_3761 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D VK055_3777 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D VK055_3772 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D VK055_2869 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D VK055_3748 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D VK055_3769 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D VK055_3848 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D VK055_3754 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D VK055_3747 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D VK055_3776 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D VK055_3768 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D VK055_3905 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D VK055_4568 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D VK055_2867 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D VK055_3759 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D VK055_2556 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D VK055_3997 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D VK055_3113 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D VK055_3758 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D VK055_3755 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D VK055_3756 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D VK055_3767 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5
D VK055_3770 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D VK055_2866 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D VK055_3112 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D VK055_3114 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D VK055_3111 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VK055_3847 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D VK055_3765 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D VK055_3774 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D VK055_3762 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D VK055_3779 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D VK055_3771 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D VK055_4571 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D VK055_0279 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D VK055_3760 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D VK055_3757 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D VK055_3766 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D VK055_3882 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D VK055_3492 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D VK055_3764 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D VK055_3773 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D VK055_2115 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VK055_3245 rpmE2; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VK055_1378 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D VK055_3493 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D VK055_0278 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D VK055_2113 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D VK055_4903 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D VK055_3797 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_4589 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3215 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3308 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_2347 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3082 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_2696 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3799 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_2351 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3311 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3219 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3129 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_4586 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_2699 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_4588 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3216 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_2348 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3796 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_2697 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3309 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:kpt03009]
D VK055_4609 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VK055_2906 yjeR; oligoribonuclease monomer K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VK055_4610 era; GTP-binding protein Era K03595 era; GTPase
D VK055_3884 cgtA; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D VK055_2423 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D VK055_3901 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D VK055_2186 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D VK055_3115 nusG; transcription termination/antitermination factorNusG K02601 nusG; transcription termination/antitermination protein NusG
D VK055_4905 rsuA; 16S rRNA pseudouridine 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D VK055_2526 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D VK055_3784 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D VK055_2604 16S rRNA m2G1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D VK055_3639 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D VK055_4100 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D VK055_0098 rsmF; ribosomal RNA small subunit methyltransferase F K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D VK055_3328 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VK055_2486 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D VK055_3925 yraL; 16S rRNA 2'-O-ribose C1402 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D VK055_3608 SAM-dependent methyltransferase family protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D VK055_0112 yebH; 23S rRNA m1G745 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D VK055_2884 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D VK055_3888 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D VK055_1693 rlmF; 23S rRNA m6A1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D VK055_3957 rlmG; 23S rRNA m2G1835 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D VK055_1864 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D VK055_1491 rlmI; 23S rRNA m5C1962 methyltransferase monomer K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VK055_3605 protein involved in utilization of DNA as a carbon source K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D VK055_1510 rlmL; 23S rRNA m2G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D VK055_4354 mtfA; 23S rRNA 2'-O-ribose C2498 methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D VK055_4653 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D VK055_4387 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D VK055_1599 rumB; 23S rRNA (uracil-5-)-methyltransferase RumB K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D VK055_0178 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VK055_2517 yabO; 23S rRNA and tRNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VK055_1188 23S rRNA pseudouridine 2605 synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D VK055_1381 yceC; 23S rRNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D VK055_4583 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VK055_1319 23S rRNA pseudouridine 2457 synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D VK055_3064 23S rRNA pseudouridine 2604 synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D VK055_4597 RNA 2'-O ribose methyltransferase substrate binding family protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D VK055_2602 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VK055_1388 rimJ; ribosomal-protein-S5-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D VK055_1606 alpha-L-glutamate ligase, RimK family protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D VK055_0536 rimL; ribosomal-protein-L12-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D VK055_4569 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D VK055_1661 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D VK055_1551 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D VK055_3808 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D VK055_4793 prmB; N5-glutamine methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D VK055_1328 cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D VK055_2700 cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D VK055_1382 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VK055_3822 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D VK055_4097 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D VK055_1062 ATP-dependent RNA helicase, specific for 23S rRNA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D VK055_3909 csdA, DEAD-box RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VK055_4600 srmB, DEAD-box RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D VK055_2907 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VK055_4659 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D VK055_2893 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D VK055_3790 protein involved in synthesis of threonylcarbamoyladenosine-modified tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VK055_3470 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VK055_3903 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D VK055_3900 rimP; ribosome maturation protein K09748 rimP; ribosome maturation factor RimP
D VK055_2064 S4 domain protein K14761 rlbA; ribosome-associated protein
D VK055_1863 oligomerization domain protein K09710 ybeB; ribosome-associated protein
D VK055_1847 ybeY; YbeY K07042 ybeY; probable rRNA maturation factor
D VK055_3887 CRS1 / YhbY domain protein K07574 yhbY; RNA-binding protein
D VK055_3524 hypothetical protein K14762 yibL; ribosome-associated protein
D VK055_2835 hypothetical protein K09889 yjgA; ribosome-associated protein
D VK055_3864 putative ribosome-associated, sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D VK055_4581 yfiA; stationary phase translation inhibitor and ribosome stability factor K05809 raiA; ribosome-associated inhibitor A
D VK055_0638 30S ribosomal subunit S22 family protein K02972 sra; stationary-phase-induced ribosome-associated protein
D VK055_0206 50S ribosome-binding GTPase family protein K06942 ychF; ribosome-binding ATPase
D VK055_1379 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:kpt03016]
D VK055_4850 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D VK055_4012 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D VK055_4762 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VK055_2358 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VK055_2554 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VK055_1858 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VK055_4963 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VK055_1830 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VK055_0059 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VK055_4164 lysS2; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VK055_2049 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VK055_0067 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VK055_4487 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VK055_2548 threonyl and Alanyl tRNA synthetase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VK055_1526 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VK055_0276 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VK055_1560 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VK055_2065 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VK055_2796 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VK055_4656 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VK055_0280 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VK055_0281 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VK055_0502 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VK055_2689 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VK055_3715 trpS2; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VK055_3290 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D VK055_1365 ycfF; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VK055_4083 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D VK055_2357 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D VK055_4805 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D VK055_3904 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D VK055_4409 ygbO; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D VK055_4639 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VK055_3790 protein involved in synthesis of threonylcarbamoyladenosine-modified tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VK055_2895 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VK055_3357 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D VK055_3327 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VK055_1252 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D VK055_2855 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VK055_0486 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D VK055_3485 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D VK055_1879 ribonuclease T2 family protein K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21]
D VK055_1168 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D VK055_0129 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D VK055_2421 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D VK055_2585 ccmA7; heme ABC exporter, ATP-binding protein CcmA K06020 ettA; energy-dependent translational throttle protein EttA
D VK055_3546 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VK055_3547 glyS; glycyl-tRNA synthetase, &beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VK055_2424 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VK055_2086 ybaK; cys-tRNAPro and Cys-tRNACys deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D VK055_1282 ybaK / prolyl-tRNA synthetases associated domainprotein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D VK055_4618 putative Cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D VK055_3035 yjbN; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D VK055_3806 yhdG; tRNA dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D VK055_4942 tRNA dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D VK055_1845 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D VK055_0063 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D VK055_0062 cmoB; tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D VK055_1536 ubiE/COQ5 methyltransferase family protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D VK055_2574 RNA methyltransferase, TrmH, group 1 family protein K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D VK055_3222 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D VK055_4570 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D VK055_4597 RNA 2'-O ribose methyltransferase substrate binding family protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D VK055_3469 spoU rRNA Methylase family protein K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D VK055_4637 tRNA:Cm32/Um32 methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D VK055_3520 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D VK055_4602 putative S-adenosyl-L-methionine-dependent methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D VK055_4380 yqcB; tRNA pseudouridine 65 synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D VK055_0178 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VK055_2517 yabO; 23S rRNA and tRNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VK055_1321 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VK055_1061 putative C32 tRNA thiolase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D VK055_3634 sirA-like family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VK055_3746 dsrH; sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VK055_3745 tusC; sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VK055_3744 dsrE/DsrF-like family protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VK055_1488 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VK055_4641 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D VK055_4156 putative folate-dependent regulatory protein K06980 ygfZ; tRNA-modifying protein YgfZ
D VK055_2798 tRNA-family protein K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D VK055_4799 mnmC; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D VK055_2198 queA; tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D VK055_2146 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VK055_4395 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VK055_4394 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VK055_4377 queF; queuine synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VK055_2900 putative iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D VK055_2071 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D VK055_2197 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D VK055_2179 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VK055_2364 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D VK055_4703 tRNAMet cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D VK055_0126 putative peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D VK055_3998 putative peptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D VK055_2898 yjeE; essential protein with weak ATPase activity K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D VK055_4348 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D VK055_2885 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VK055_3907 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VK055_5108 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:kpt03012]
D VK055_1173 translation initiation factor SUI1 family protein K03113 EIF1; translation initiation factor 1
D VK055_3902 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D VK055_0277 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D VK055_3736 yheS; yheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D VK055_2382 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D VK055_3117 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D VK055_3750 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D VK055_3749 fusA; translation elongation factor G K02355 fusA; elongation factor G
D VK055_5050 fusA2; translation elongation factor G K02355 fusA; elongation factor G
D VK055_3531 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D VK055_0216 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D VK055_2380 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D VK055_0217 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D VK055_0207 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D VK055_1570 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D VK055_2919 efp; translation elongation factor P K02356 efp; elongation factor P
D VK055_4918 elongation factor P (EF-P) OB domain protein K02356 efp; elongation factor P
D VK055_2911 EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D VK055_2920 kamA family protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D VK055_4797 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D VK055_4163 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D VK055_2600 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D VK055_2361 putative-tRNA hydrolase domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:kpt03110]
D VK055_1571 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D VK055_4585 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D VK055_2153 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D VK055_3251 hslU; ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D VK055_2094 htpG; htpG K04079 HSP90A; molecular chaperone HtpG
D VK055_2560 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VK055_4643 hscA; fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D VK055_5006 hsp70 family protein K04046 yegD; hypothetical chaperone protein
D VK055_2930 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VK055_2559 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VK055_2955 putative chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D VK055_2522 dnaJ domain protein K05801 djlA; DnaJ like chaperone protein
D VK055_4642 hscB; fe-S protein assembly co-chaperone K04082 hscB; molecular chaperone HscB
D VK055_3699 hslO; molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D VK055_4564 grpE; phage lambda replication host DNA synthesis heatshock protein repair K03687 GRPE; molecular chaperone GrpE
D VK055_0902 hsp20/alpha crystallin family protein K04080 ibpA; molecular chaperone IbpA
D VK055_3373 ibpA; small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA
D VK055_3374 ibpB; small heat shock protein ibpB K04081 ibpB; molecular chaperone IbpB
D VK055_3700 yrfH; heat shock protein Hsp15 involved in ribosome recycling K04762 hslR; ribosome-associated heat shock protein Hsp15
D VK055_2931 groS; groES K04078 groES; chaperonin GroES
D VK055_2389 htrA; degP K04771 degP; serine protease Do [EC:3.4.21.107]
D VK055_3889 hflB; ftsH HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VK055_3330 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VK055_2289 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_4231 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_4072 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_3517 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D VK055_1232 periplasmic protein related to spheroblast formation K06006 cpxP; periplasmic protein CpxP/Spy
D VK055_3256 LTXXQ motif family protein K06006 cpxP; periplasmic protein CpxP/Spy
D VK055_3090 heavy-metal resistance family protein K07803 zraP; zinc resistance-associated protein
D VK055_4183 hdeA/HdeB family protein K19777 hdeA; acid stress chaperone HdeA
D VK055_3986 hdeA/HdeB family protein K19778 hdeB; acid stress chaperone HdeB
D VK055_3991 hdeA/HdeB family protein K19778 hdeB; acid stress chaperone HdeB
D VK055_4198 hdeB; acid stress chaperone K19778 hdeB; acid stress chaperone HdeB
D VK055_4451 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D VK055_4450 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D VK055_0923 dmsD; DMS reductase maturation protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D VK055_3725 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VK055_2066 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VK055_2150 surA N-terminal domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D VK055_3742 peptidyl-prolyl cis-trans isomerase in protein folding K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D VK055_2864 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D VK055_2552 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D VK055_3740 slyD; FKBP-type rotamase, peptidyl prolyl cis-trans isomerase FKBP-type peptidyl prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D VK055_3200 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D VK055_3201 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D VK055_2524 surA; peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D VK055_3193 trxA2; thioredoxin K03671 TXN; thioredoxin
D VK055_0780 trxA; thioredoxin K03671 TXN; thioredoxin
D VK055_4596 trxA3; thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D VK055_2078 chaperone and weak protein oxidoreductase K05838 ybbN; putative thioredoxin
D VK055_1609 grxA; glutaredoxin, GrxA family K03674 grxA; glutaredoxin 1
D VK055_3516 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D VK055_0485 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D VK055_3303 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VK055_1426 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VK055_0137 dsbB; dsbBreduced K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D VK055_4161 dsbC; dsbCreduced K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VK055_2938 dipZ; fused thiol:disulfide interchange protein: membrane electron transporter: activator of DsbC K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D VK055_0399 dsbE; disulfide oxidoreductase, DsbE subfamily protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D VK055_1884 dsbGreduced K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:kpt04131]
D VK055_4652 ndk; ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VK055_1006 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VK055_1263 gap2; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VK055_1767 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D VK055_0078 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VK055_0327 pyk2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VK055_2094 htpG; htpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:kpt04121]
C 03051 Proteasome [BR:kpt03051]
D VK055_2094 htpG; htpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:kpt03032]
D VK055_2338 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VK055_0016 dcm; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_5150 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_3092 hupA; DNA-binding protein HU-&alpha K05787 hupA; DNA-binding protein HU-alpha
D VK055_2151 hupB; DNA-binding protein HU-&beta, NS1 K03530 hupB; DNA-binding protein HU-beta
D VK055_0282 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VK055_1545 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VK055_3359 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VK055_3032 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VK055_2622 dnaC; chromosome replication; initiation and chain elongation K02315 dnaC; DNA replication protein DnaC
D VK055_3996 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VK055_3025 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VK055_2368 DNA polymerase III, &alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VK055_3360 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VK055_2795 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VK055_1860 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VK055_1368 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VK055_2336 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VK055_2097 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VK055_2603 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VK055_0089 holE; DNA polymerase III, &theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D VK055_2369 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VK055_3301 polA; DNA polymerase I, 3' --5' polymerase, 5' --3' and 3' --5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VK055_3473 ligB; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_4754 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_0989 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D VK055_1639 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_3712 dam3; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_5159 dam2; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_1821 seqA; seqA, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D VK055_4692 hda; dnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D VK055_4875 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VK055_3362 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VK055_4037 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VK055_4030 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VK055_1182 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VK055_1251 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:kpt03036]
D VK055_0016 dcm; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_5150 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_4609 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VK055_0251 hns; H-NS transcriptional dual regulator K03746 hns; DNA-binding protein H-NS
D VK055_1420 putative h-NS-like DNA-binding protein K03746 hns; DNA-binding protein H-NS
D VK055_4520 stpA; H-NS-like DNA-binding protein with RNA chaperoneactivity K11685 stpA; DNA-binding protein StpA
D VK055_3092 hupA; DNA-binding protein HU-&alpha K05787 hupA; DNA-binding protein HU-alpha
D VK055_2151 hupB; DNA-binding protein HU-&beta, NS1 K03530 hupB; DNA-binding protein HU-beta
D VK055_0282 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VK055_1545 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VK055_2955 putative chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D VK055_2956 merR HTH regulatory family protein K18997 cbpM; chaperone modulatory protein CbpM
D VK055_2581 rob; bacterial regulatory helix-turn-helix, AraC family protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_4553 rarA; bacterial regulatory helix-turn-helix, AraC family protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_3359 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VK055_3922 gmhA2; phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D VK055_1492 hemimethylated DNA binding domain protein K11940 hspQ; heat shock protein HspQ
D VK055_1688 dps; stationary phase nucleoid protein that sequesters iron and protects DNA from damage K04047 dps; starvation-inducible DNA-binding protein
D VK055_3805 fis; fis transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VK055_2894 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D VK055_4132 iciA; argP transcriptional activator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VK055_0243 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VK055_1564 lrp; lrp transcriptional dual regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VK055_1525 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VK055_4898 yjeK; DNA-associated protein K06899 ndpA; nucleoid-associated protein
D VK055_1533 mukB; cell division protein involved in chromosome partitioning K03632 mukB; chromosome partition protein MukB
D VK055_1534 mukE; protein involved in chromosome partitioning K03804 mukE; chromosome partition protein MukE
D VK055_1535 mukF; ca2+-binding protein involved in chromosome partitioning K03633 mukF; chromosome partition protein MukF
D VK055_2473 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VK055_4406 ftsB; essential cell division protein FtsB K05589 ftsB; cell division protein FtsB
D VK055_3641 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VK055_2484 ftsI2; essential cell division FtsI; penicillin-bindingprotein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VK055_0111 ftsI; essential cell division FtsI; penicillin-bindingprotein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VK055_1563 essential cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D VK055_2485 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D VK055_3249 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN
D VK055_2474 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D VK055_2479 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VK055_3642 putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D VK055_2472 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VK055_4753 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D VK055_3459 zapB; cell division factor ZapB K09892 zapB; cell division protein ZapB
D VK055_1511 hypothetical protein K18657 zapC; cell division protein ZapC
D VK055_2466 hypothetical protein K18778 zapD; cell division protein ZapD
D VK055_0670 AFG1-like ATPase family protein K06916 zapE; cell division protein ZapE
D VK055_3846 putative ATP-dependent endonuclease K06916 zapE; cell division protein ZapE
D VK055_2865 opacity-associated A N-terminal motif family protein K07269 ytfB; cell division protein YtfB
D VK055_2897 amiB; N-acetylmuramoyl-L-alanine amidase 2 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_4300 amiC; N-acetylmuramyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_4733 N-acetylmuramoyl-L-alanine amidase 1 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VK055_3427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_2105 acrA; acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_0132 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VK055_0131 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VK055_0130 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D VK055_1500 sulA; SOS cell division inhibitor K13053 sulA; cell division inhibitor SulA
D VK055_3488 ttk; cell division inhibitor K05501 slmA; TetR/AcrR family transcriptional regulator
D VK055_1821 seqA; seqA, negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D VK055_3818 mreB; mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VK055_3819 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D VK055_3820 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D VK055_1866 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VK055_5153 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VK055_4037 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VK055_4030 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VK055_3327 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VK055_3328 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VK055_3165 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D VK055_4160 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VK055_4964 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VK055_3727 fic; stationary-phase protein with possible role in p-aminobenzoate/folate biosynthesis K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D VK055_3300 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:kpt03400]
D VK055_0973 methylated-DNA-[]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D VK055_1811 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VK055_4598 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VK055_4082 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VK055_0508 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VK055_2468 mutT; 8-oxo-dGTPase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VK055_3489 dut; dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D VK055_3476 methylated-DNA-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D VK055_4887 ada transcriptional dual regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D VK055_4888 alkB repair system for alkylated DNA and RNA K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D VK055_3994 uracil DNA glycosylase superfamily protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D VK055_5007 3-methyl-adenine DNA glycosylase II, inducible K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VK055_3562 tag; 3-methyladenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VK055_3494 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VK055_1803 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D VK055_1238 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VK055_4925 apurinic endonuclease family protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VK055_3094 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D VK055_4162 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VK055_3473 ligB; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_4754 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VK055_3301 polA; DNA polymerase I, 3' --5' polymerase, 5' --3' and 3' --5' exonuclease K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VK055_3026 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D VK055_1726 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VK055_0033 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D VK055_1231 endonuclease of nucleotide excision repair K05984 cho; excinuclease Cho [EC:3.1.25.-]
D VK055_3163 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VK055_3110 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VK055_3109 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VK055_3778 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VK055_3471 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VK055_1352 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VK055_4422 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VK055_2896 mutL; mutL K03572 mutL; DNA mismatch repair protein MutL
D VK055_4284 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D VK055_5051 exonuclease I, 3' --5' specific deoxyribophosphodiesterase K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VK055_4663 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VK055_2180 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VK055_0088 exonuclease family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D VK055_2368 DNA polymerase III, &alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VK055_3360 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VK055_2795 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VK055_1860 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VK055_1368 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VK055_2336 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VK055_2097 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VK055_2603 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VK055_0089 holE; DNA polymerase III, &theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D VK055_3025 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VK055_1639 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_3712 dam3; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_5159 dam2; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_0018 DNA mismatch endonuclease of the very short patch (VSP) mismatch repair pathway K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D VK055_4296 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VK055_4294 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VK055_4297 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VK055_4485 recA; protein RecA K03553 recA; recombination protein RecA
D VK055_0071 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VK055_0072 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VK055_0070 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VK055_5160 endodeoxyribonuclease RusA family protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D VK055_3246 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VK055_2100 primosomal replication priB and priC family protein K04067 priC; primosomal replication protein N''
D VK055_2621 dnaT; dnaT K02317 dnaT; DNA replication protein DnaT
D VK055_2218 ATP-dependent dsDNA exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D VK055_2217 sbcD; exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D VK055_2587 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D VK055_3361 recF; ssDNA and dsDNA binding, ATP binding protein K03629 recF; DNA replication and repair protein RecF
D VK055_3468 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VK055_4611 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VK055_2095 recR; recombination protein RecR K06187 recR; recombination protein RecR
D VK055_4562 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D VK055_2220 rdgC; nonspecific DNA binding protein; nucleoid component K03554 rdgC; recombination associated protein RdgC
D VK055_5155 exonuclease, RdgC family protein K03554 rdgC; recombination associated protein RdgC
D VK055_0385 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D VK055_4904 helicase conserved C-terminal domain protein K19789 radD; DNA repair protein RadD
D VK055_2790 putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D VK055_4875 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VK055_3362 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VK055_1182 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VK055_3092 hupA; DNA-binding protein HU-&alpha K05787 hupA; DNA-binding protein HU-alpha
D VK055_2151 hupB; DNA-binding protein HU-&beta, NS1 K03530 hupB; DNA-binding protein HU-beta
D VK055_3805 fis; fis transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VK055_0282 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VK055_1545 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VK055_3158 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VK055_0251 hns; H-NS transcriptional dual regulator K03746 hns; DNA-binding protein H-NS
D VK055_1420 putative h-NS-like DNA-binding protein K03746 hns; DNA-binding protein H-NS
D VK055_2319 impB/mucB/samB family protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D VK055_1277 SOS mutagenesis and repair K03502 umuC; DNA polymerase V
D VK055_1278 umuD; SOS mutagenesis error-prone repair processed to UmuD' forms complex with UmuC K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D VK055_3042 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D VK055_2515 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D VK055_3376 putative dNA-damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D
D VK055_1393 dinI-like family protein K12149 dinI; DNA-damage-inducible protein I
D VK055_4486 recX family protein K03565 recX; regulatory protein
D VK055_2668 hypothetical protein K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
D VK055_3199 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D VK055_1495 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D VK055_1699 DEAD/DEAH box helicase family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VK055_0125 DEAD/DEAH box helicase family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VK055_4873 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VK055_4511 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VK055_4872 nrdB; nrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VK055_4510 nrdF2; ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:kpt03029]
D VK055_3902 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D VK055_0277 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D VK055_2382 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D VK055_3117 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D VK055_3750 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D VK055_3749 fusA; translation elongation factor G K02355 fusA; elongation factor G
D VK055_5050 fusA2; translation elongation factor G K02355 fusA; elongation factor G
D VK055_4610 era; GTP-binding protein Era K03595 era; GTPase
D VK055_0502 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VK055_1858 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VK055_0067 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VK055_0059 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VK055_3025 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VK055_2375 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D VK055_3017 yaeT2; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D VK055_2560 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VK055_4564 grpE; phage lambda replication host DNA synthesis heatshock protein repair K03687 GRPE; molecular chaperone GrpE
D VK055_2930 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VK055_2931 groS; groES K04078 groES; chaperonin GroES
D VK055_2559 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VK055_4639 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VK055_4642 hscB; fe-S protein assembly co-chaperone K04082 hscB; molecular chaperone HscB
D VK055_0485 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D VK055_4964 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VK055_2164 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VK055_3358 oxaA; inner-membrane protein insertion factor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VK055_2094 htpG; htpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:kpt02000]
D VK055_5123 ybtP; ABC transporter family protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D VK055_5124 ybtQ; ABC transporter family protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D VK055_1543 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VK055_2141 ABC transporter family protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D VK055_2140 ABC transporter family protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D VK055_5102 iroC; lipid A export permease/ATP-binding protein MsbA K18895 iroC; ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
D VK055_2923 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D VK055_1568 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VK055_1567 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VK055_1574 macB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D VK055_4889 yojI K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D VK055_1509 ccmA2; heme ABC exporter, ATP-binding protein CcmA K15738 uup; ABC transport system ATP-binding/permease protein
D VK055_4738 cysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VK055_3460 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VK055_4739 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VK055_4740 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VK055_4741 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VK055_1759 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D VK055_0335 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein
D VK055_0176 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein
D VK055_1758 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D VK055_1756 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VK055_1762 ABC transporter family protein K05776 modF; molybdate transport system ATP-binding protein
D VK055_0228 NMT1-like family protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VK055_0229 ntrB; nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D VK055_0230 nitrate ABC transporter, ATP-binding C and D family protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VK055_2245 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D VK055_2243 binding-protein-dependent transport system innermembrane component family protein K15552 tauC; taurine transport system permease protein
D VK055_2244 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D VK055_0352 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_1515 ssuA; nitrate transport protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_4373 ABC transporter, substrate-binding, aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_0353 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D VK055_1517 ycbM; ssuC K15554 ssuC; sulfonate transport system permease protein
D VK055_0354 binding-protein-dependent transport system innermembrane component family protein K15554 ssuC; sulfonate transport system permease protein
D VK055_1518 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D VK055_0355 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D VK055_0597 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D VK055_0375 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D VK055_1479 fbpA; fe(3+)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D VK055_0598 binding-protein-dependent transport system innermembrane component family protein K02011 afuB; iron(III) transport system permease protein
D VK055_0376 binding-protein-dependent transport system innermembrane component family protein K02011 afuB; iron(III) transport system permease protein
D VK055_1478 binding-protein-dependent transport system innermembrane component family protein K02011 afuB; iron(III) transport system permease protein
D VK055_0596 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VK055_0377 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VK055_1477 fbpC; fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VK055_2506 thiB; thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D VK055_2507 thiP; thiamine/thiamine pyrophosphate ABC transporter,permease protein K02063 thiP; thiamine transport system permease protein
D VK055_2509 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VK055_1333 potD; potD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VK055_1332 potC; potC K11070 potC; spermidine/putrescine transport system permease protein
D VK055_1331 potB; potB K11071 potB; spermidine/putrescine transport system permease protein
D VK055_1330 potA; potA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VK055_1604 potF; potF K11073 potF; putrescine transport system substrate-binding protein
D VK055_1601 potI; potI K11074 potI; putrescine transport system permease protein
D VK055_1602 potH K11075 potH; putrescine transport system permease protein
D VK055_1603 potG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D VK055_0553 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VK055_0556 binding-protein-dependent transport system innermembrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VK055_3010 binding-protein-dependent transport system innermembrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VK055_0555 binding-protein-dependent transport system innermembrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VK055_3011 binding-protein-dependent transport system innermembrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VK055_0554 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VK055_3404 phnS; 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D VK055_3407 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D VK055_3406 phnU; 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D VK055_3405 phnT; 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D VK055_4507 proX; proX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VK055_4508 binding-protein-dependent transport system innermembrane component family protein K02001 proW; glycine betaine/proline transport system permease protein
D VK055_4509 proV; proV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VK055_4955 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D VK055_4956 binding-protein-dependent transport system innermembrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D VK055_4958 binding-protein-dependent transport system innermembrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D VK055_4957 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D VK055_0688 putative thiamine biosynthesis protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D VK055_0689 binding-protein-dependent transport system innermembrane component family protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D VK055_0690 ABC transporter family protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D VK055_1242 bacterial extracellular solute-binding family protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D VK055_1243 binding-protein-dependent transport system innermembrane component family protein K05778 ynjC; putative thiamine transport system permease protein
D VK055_1244 ABC transporter family protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D VK055_0424 NMT1/THI5 like family protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D VK055_0431 NMT1/THI5 like family protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D VK055_0422 binding-protein-dependent transport system innermembrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D VK055_0423 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D VK055_3051 malE; malE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VK055_3052 malF K10109 malF; maltose/maltodextrin transport system permease protein
D VK055_3053 malG; malG K10110 malG; maltose/maltodextrin transport system permease protein
D VK055_2125 malK; malK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VK055_3049 malK2; malK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VK055_2123 cycB; cyclodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D VK055_2122 binding-protein-dependent transport system innermembrane component family protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D VK055_2121 binding-protein-dependent transport system innermembrane component family protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D VK055_0051 periplasmic binding and sugar binding domain of LacI family protein K10537 araF; L-arabinose transport system substrate-binding protein
D VK055_0053 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein
D VK055_0052 araG; arabinose import ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D VK055_4265 bacterial extracellular solute-binding family protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D VK055_4268 binding-protein-dependent transport system innermembrane component family protein K10193 togM; oligogalacturonide transport system permease protein
D VK055_4267 binding-protein-dependent transport system innermembrane component family protein K10194 togN; oligogalacturonide transport system permease protein
D VK055_4266 ABC transporter family protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D VK055_4935 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VK055_4937 branched-chain amino acid transport system / permease component family protein K10541 mglC; methyl-galactoside transport system permease protein
D VK055_4936 ABC transporter family protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D VK055_4088 periplasmic binding and sugar binding domain of LacI family protein K10543 xylF; D-xylose transport system substrate-binding protein
D VK055_3539 xylF; D-xylose ABC transporter, D-xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D VK055_4086 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D VK055_3537 xylH; xylH K10544 xylH; D-xylose transport system permease protein
D VK055_4087 ABC transporter family protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D VK055_3538 ccmA12; heme ABC exporter, ATP-binding protein CcmA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D VK055_3267 rhaS; rhamnose ABC transporter, rhamnose-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D VK055_3269 branched-chain amino acid transport system / permease component family protein K10560 rhaP; rhamnose transport system permease protein
D VK055_3270 branched-chain amino acid transport system / permease component family protein K10561 rhaQ; rhamnose transport system permease protein
D VK055_3268 ccmA10; heme ABC exporter, ATP-binding protein CcmA K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D VK055_3317 rbsB K10439 rbsB; ribose transport system substrate-binding protein
D VK055_2980 periplasmic binding and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D VK055_1892 ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit K10439 rbsB; ribose transport system substrate-binding protein
D VK055_0767 periplasmic binding and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D VK055_3318 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_2979 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_1894 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_1895 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_0764 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D VK055_0765 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VK055_3319 ccmA11; heme ABC exporter, ATP-binding protein CcmA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VK055_2978 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VK055_1893 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VK055_2843 ytfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein
D VK055_2840 yjfF; yjfF K23509 ytfT; galactofuranose transport system permease protein
D VK055_2841 ytfT K23509 ytfT; galactofuranose transport system permease protein
D VK055_2842 ytfR; ytfR K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D VK055_1936 periplasmic binding and sugar binding domain of LacI family protein K17202 eryG; erythritol transport system substrate-binding protein
D VK055_1939 branched-chain amino acid transport system / permease component family protein K17203 eryF; erythritol transport system permease protein
D VK055_1938 ccmA5; heme ABC exporter, ATP-binding protein CcmA K17204 eryE; erythritol transport system ATP-binding protein
D VK055_0204 periplasmic binding and sugar binding domain of LacI family protein K17213 K17213; inositol transport system substrate-binding protein
D VK055_2042 periplasmic binding and sugar binding domain of LacI family protein K17213 K17213; inositol transport system substrate-binding protein
D VK055_2040 branched-chain amino acid transport system / permease component family protein K17214 K17214; inositol transport system permease protein
D VK055_2041 ccmA6; heme ABC exporter, ATP-binding protein CcmA K17215 K17215; inositol transport system ATP-binding protein
D VK055_2774 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D VK055_3657 ugpB; ugpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D VK055_2770 binding-protein-dependent transport system innermembrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D VK055_3658 ugpA; ugpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D VK055_2771 binding-protein-dependent transport system innermembrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D VK055_3659 ugpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D VK055_2773 ugpC2; ugpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D VK055_3660 ugpC; ugpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D VK055_2079 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D VK055_2080 putative transporter subunit: ATP-binding component of ABC superfamily K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D VK055_3964 putative sugar ABC transporter K10555 lsrB; AI-2 transport system substrate-binding protein
D VK055_3962 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D VK055_3963 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D VK055_3961 ccmA13; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D VK055_3874 yrbD; mlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VK055_3873 yrbE; mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VK055_3872 yrbF; mlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VK055_3875 yrbC; mlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D VK055_3876 yrbB; mlaB K07122 mlaB; phospholipid transport system transporter-binding protein
D VK055_2688 putative LACI-type transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D VK055_1912 periplasmic binding and sugar binding domain of LacI family protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D VK055_2685 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D VK055_2686 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D VK055_1913 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D VK055_2687 ccmA8; heme ABC exporter, ATP-binding protein CcmA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VK055_1914 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VK055_3342 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VK055_3343 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D VK055_3344 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D VK055_3345 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VK055_2269 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D VK055_2270 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D VK055_2271 phnE2; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D VK055_2268 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D VK055_2020 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D VK055_4814 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D VK055_4817 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein
D VK055_4816 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D VK055_4818 hisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D VK055_4815 lysine-arginine-ornithine-binding periplasmic family protein K10014 hisJ; histidine transport system substrate-binding protein
D VK055_1689 glnH; glnH K10036 glnH; glutamine transport system substrate-binding protein
D VK055_1690 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein
D VK055_1691 glnQ; glnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D VK055_2905 artI3; artI K09996 artJ; arginine transport system substrate-binding protein
D VK055_1595 artI2; artI K09996 artJ; arginine transport system substrate-binding protein
D VK055_1592 artI; artI K09997 artI; arginine transport system substrate-binding protein
D VK055_1594 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09998 artM; arginine transport system permease protein
D VK055_1593 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09999 artQ; arginine transport system permease protein
D VK055_1591 ABC transporter family protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VK055_1850 bacterial extracellular solute-binding, 3 familyprotein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D VK055_1852 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D VK055_1851 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D VK055_1853 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D VK055_0026 bacterial extracellular solute-binding, 3 familyprotein K02424 tcyA; L-cystine transport system substrate-binding protein
D VK055_0028 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein
D VK055_0029 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D VK055_0165 ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_2251 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_3647 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_3650 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VK055_0166 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_2252 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_3651 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D VK055_2253 livM; branched-chain amino-acid ABC transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_0167 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_3652 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D VK055_0168 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_2254 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_3653 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VK055_2255 livF; branched-chain amino-acid ABC transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_0169 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_3654 livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VK055_2355 metQ2; metQ K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_0288 metQ; metQ K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_1074 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_0834 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_3437 metQ3; metQ K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_4370 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D VK055_2354 binding-protein-dependent transport system innermembrane component family protein K02072 metI; D-methionine transport system permease protein
D VK055_1072 binding-protein-dependent transport system innermembrane component family protein K02072 metI; D-methionine transport system permease protein
D VK055_0836 binding-protein-dependent transport system innermembrane component family protein K02072 metI; D-methionine transport system permease protein
D VK055_4369 binding-protein-dependent transport system innermembrane component family protein K02072 metI; D-methionine transport system permease protein
D VK055_2353 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VK055_1073 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D VK055_0835 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D VK055_4368 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D VK055_0880 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein
D VK055_0879 urtB; urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D VK055_0878 urtC; urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D VK055_0877 urtD; urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D VK055_0876 urtE; urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D VK055_0655 bacterial extracellular solute-binding, 3 familyprotein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VK055_0363 bacterial extracellular solute-binding, 3 familyprotein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VK055_0582 bacterial extracellular solute-binding, 3 familyprotein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VK055_0586 bacterial extracellular solute-binding, 3 familyprotein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VK055_0723 bacterial extracellular solute-binding, 3 familyprotein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VK055_1965 bacterial extracellular solute-binding, 3 familyprotein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VK055_2258 bacterial extracellular solute-binding, 3 familyprotein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VK055_4545 bacterial extracellular solute-binding, 3 familyprotein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VK055_0364 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VK055_0584 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VK055_0724 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VK055_0725 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VK055_1963 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VK055_1964 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VK055_2260 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VK055_2261 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VK055_4544 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VK055_0365 artP; amino acid ABC transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VK055_0726 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VK055_0585 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VK055_1962 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VK055_2259 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VK055_0258 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_1485 oppA2; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_1136 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VK055_0259 oppB; oppB K15581 oppB; oligopeptide transport system permease protein
D VK055_0260 binding-protein-dependent transport system innermembrane component family protein K15582 oppC; oligopeptide transport system permease protein
D VK055_0261 oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VK055_0262 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VK055_3568 dppA K12368 dppA; dipeptide transport system substrate-binding protein
D VK055_0563 dppA K12368 dppA; dipeptide transport system substrate-binding protein
D VK055_3569 dppB; dppB K12369 dppB; dipeptide transport system permease protein
D VK055_3570 dppC; dppC K12370 dppC; dipeptide transport system permease protein
D VK055_3571 dppD; dppD K12371 dppD; dipeptide transport system ATP-binding protein
D VK055_3572 dppF K12372 dppF; dipeptide transport system ATP-binding protein
D VK055_1157 bacterial extracellular solute-binding, 5 Middlefamily protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VK055_1158 binding-protein-dependent transport system innermembrane component family protein K19227 sapB; cationic peptide transport system permease protein
D VK055_1159 N-terminal TM domain of oligopeptide transport permease C family protein K19228 sapC; cationic peptide transport system permease protein
D VK055_1160 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VK055_1161 sapF; sapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VK055_3620 nikA; nickel ABC transporter, nickel/metallophore periplasmic binding protein K15584 nikA; nickel transport system substrate-binding protein
D VK055_3619 nikB; nickel ABC transporter, permease subunit NikB K15585 nikB; nickel transport system permease protein
D VK055_3618 nikC; nickel ABC transporter, permease subunit NikC K15586 nikC; nickel transport system permease protein
D VK055_3617 ABC transporter family protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D VK055_3616 nikE3; nickel import ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D VK055_1664 bacterial extracellular solute-binding, 5 Middlefamily protein K13889 gsiB; glutathione transport system substrate-binding protein
D VK055_1663 binding-protein-dependent transport system innermembrane component family protein K13890 gsiC; glutathione transport system permease protein
D VK055_1662 N-terminal TM domain of oligopeptide transport permease C family protein K13891 gsiD; glutathione transport system permease protein
D VK055_1665 nikE2; nickel import ATP-binding protein NikE K13892 gsiA; glutathione transport system ATP-binding protein
D VK055_1955 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_0456 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_0630 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_4188 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_1974 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_4988 bacterial extracellular solute-binding, 5 Middlefamily protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VK055_0455 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_0629 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_4187 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_1956 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_1973 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_4989 binding-protein-dependent transport system innermembrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VK055_1972 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_0454 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_0628 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_4186 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_1957 N-terminal TM domain of oligopeptide transport permease C family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_4990 binding-protein-dependent transport system innermembrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VK055_0627 nikE; nickel import ATP-binding protein NikE K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_0453 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_1970 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_4991 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_4185 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_1958 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VK055_4992 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_1971 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_4184 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_0452 oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_1959 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VK055_4911 yejA K13893 yejA; microcin C transport system substrate-binding protein
D VK055_4910 yejB; yejB K13894 yejB; microcin C transport system permease protein
D VK055_4909 yejE K13895 yejE; microcin C transport system permease protein
D VK055_4908 nikE4; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D VK055_2398 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VK055_2397 fecCD transport family protein K23228 fhuB; ferric hydroxamate transport system permease protein
D VK055_2399 fhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VK055_4425 periplasmic binding family protein K25132 hmuT; heme transport system substrate-binding protein
D VK055_4424 fecCD transport family protein K25133 hmuU; heme transport system permease protein
D VK055_4423 hmuV; hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D VK055_1926 fepB; periplasmic binding family protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D VK055_1928 fepD; fecCD transport family protein K23186 fepD; iron-siderophore transport system permease protein
D VK055_1929 fepG; fecCD transport family protein K23187 fepG; iron-siderophore transport system permease protein
D VK055_1930 fepC; ferric vibriobactin ABC transporter, ATP-bindingprotein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D VK055_0361 putative ferrichrome-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D VK055_2026 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D VK055_0309 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D VK055_0337 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D VK055_0359 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D VK055_0360 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D VK055_2027 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D VK055_0308 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D VK055_0336 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D VK055_0358 putative siderophore transport system ATP-binding protein yusV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D VK055_0307 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D VK055_0334 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D VK055_2028 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D VK055_2392 yadT; periplasmic vitamin B12 binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D VK055_0287 btuC; btuC K06073 btuC; vitamin B12 transport system permease protein
D VK055_0290 btuD; vitamin B12 import ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VK055_0075 znuA; high-affinity zinc uptake system protein znuA K09815 znuA; zinc transport system substrate-binding protein
D VK055_0073 fecCD transport family protein K09816 znuB; zinc transport system permease protein
D VK055_0074 ABC transporter family protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VK055_4436 periplasmic solute binding family protein K11604 sitA; manganese/iron transport system substrate-binding protein
D VK055_4434 fecCD transport family protein K11605 sitC; manganese/iron transport system permease protein
D VK055_4433 ABC 3 transport family protein K11606 sitD; manganese/iron transport system permease protein
D VK055_4435 ABC transporter family protein K11607 sitB; manganese/iron transport system ATP-binding protein
D VK055_4339 cbiN; cobalt transport family protein K02009 cbiN; cobalt/nickel transport protein
D VK055_4340 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D VK055_4338 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D VK055_4341 cobalt ABC transporter, ATP-binding family protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D VK055_4483 putative adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D VK055_4482 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D VK055_4481 ABC transporter family protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D VK055_5031 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D VK055_5032 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D VK055_2792 putative transmembrane possibly involved in transport conserved inner membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D VK055_2791 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D VK055_3866 lptB; lipopolysaccharide export system ATP-binding protein lptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VK055_1711 ABC-2 type transporter family protein K25180 ybhR; drug efflux transport system permease protein
D VK055_1710 ABC-2 type transporter family protein K25181 ybhS; drug efflux transport system permease protein
D VK055_1709 ccmA4; heme ABC exporter, ATP-binding protein CcmA K25182 ybhF; drug efflux transport system ATP-binding protein
D VK055_1708 efflux transporter, RND family, MFP subunit K25183 ybhG; membrane fusion protein YbhG
D VK055_1348 lolE; liporeleasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VK055_1350 liporeleasing system, transmembrane, LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D VK055_1349 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VK055_0396 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D VK055_0395 ccmC; ccmC K02195 ccmC; heme exporter protein C
D VK055_0394 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D VK055_0393 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VK055_3642 putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D VK055_3641 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VK055_2693 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VK055_3484 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VK055_2432 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VK055_3483 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VK055_2433 yadG; yadG K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VK055_2073 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VK055_2075 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VK055_0321 sufC; feS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D VK055_4755 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D VK055_0476 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D VK055_5130 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D VK055_3041 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D VK055_4103 MFS transporter, sugar porter family protein K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D VK055_4260 MFS transporter, sugar porter family protein K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D VK055_4629 MFS transporter, sugar porter family protein K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D VK055_0802 MFS transporter, sugar porter family protein K06609 iolT; MFS transporter, SP family, major inositol transporter
D VK055_2851 lacY3; lacY lactose MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D VK055_0888 lacY; lacY lactose MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D VK055_1660 lacY2; lacY lactose MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D VK055_4262 lacY5; lacY lactose MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D VK055_3273 lacY4; lacY lactose MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D VK055_4359 fucP; H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D VK055_2503 yabM MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D VK055_4921 setB MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D VK055_4079 nupG; nupG nucleoside MFS transporter K03289 nupG; MFS transporter, NHS family, nucleoside permease
D VK055_0174 H+ symporter family protein K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D VK055_4591 H+ symporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D VK055_2963 proP; proP proline/betaine MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D VK055_2564 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D VK055_5063 H+ symporter family protein K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D VK055_3564 oxalate/formate antiporter transporter family protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D VK055_0744 oxlT; oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D VK055_0737 sugar (and other) transporter family protein K08178 JEN; MFS transporter, SHS family, lactate transporter
D VK055_4382 D-galactonate transporter family protein K03535 gudP; MFS transporter, ACS family, glucarate transporter
D VK055_1704 sugar (and other) transporter family protein K03535 gudP; MFS transporter, ACS family, glucarate transporter
D VK055_3947 exuT2; exuT hexuronate MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D VK055_1674 exuT; exuT hexuronate MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D VK055_3855 sugar (and other) transporter family protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D VK055_1200 major Facilitator Superfamily protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D VK055_2502 sugar (and other) transporter family protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D VK055_0332 major Facilitator Superfamily protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D VK055_3370 phosphoglycerate transporter family protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D VK055_2657 hpaX; 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D VK055_3927 D-galactonate transporter family protein K12299 garP; MFS transporter, ACS family, probable galactarate transporter
D VK055_2636 L-galactonate MFS transporter K23016 lgoT; MFS transporter, ACS family, L-galactonate transporter
D VK055_4864 major Facilitator Superfamily protein K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D VK055_2172 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D VK055_3552 H+ symporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D VK055_3413 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D VK055_0345 sugar (and other) transporter family protein K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter
D VK055_2499 major Facilitator Superfamily protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D VK055_1285 cyanate transporter family protein K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D VK055_4779 sugar (and other) transporter family protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D VK055_4632 major Facilitator Superfamily protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D VK055_3396 phosphoglycerate transporter family protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D VK055_4869 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D VK055_3395 uhpC; uhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VK055_1905 major Facilitator Superfamily protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VK055_0604 narK2; narK MFS nitrate/nitrite antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D VK055_0236 narK; narK MFS nitrate/nitrite antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D VK055_4280 major Facilitator Superfamily protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D VK055_1927 entS; entS MFS transporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D VK055_2159 ampG; ampG muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VK055_3424 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VK055_4906 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VK055_3387 sugar (and other) transporter family protein K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D VK055_0624 sugar (and other) transporter family protein K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D VK055_0867 ydeA MFS transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D VK055_1652 sugar (and other) transporter family protein K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D VK055_2231 sugar (and other) transporter family protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D VK055_1400 sugar (and other) transporter family protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D VK055_1389 major Facilitator Superfamily protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D VK055_3355 sugar (and other) transporter family protein K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D VK055_3401 major Facilitator Superfamily protein K03445 nepI; MFS transporter, DHA1 family, purine ribonucleoside efflux pump
D VK055_2672 sugar (and other) transporter family protein K23241 mdtM; MFS transporter, DHA1 family, multidrug resistance protein
D VK055_0368 sugar (and other) transporter family protein K23241 mdtM; MFS transporter, DHA1 family, multidrug resistance protein
D VK055_0481 major Facilitator Superfamily protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D VK055_2343 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D VK055_0713 H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_4501 H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_0607 major Facilitator Superfamily protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_0105 major Facilitator Superfamily protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_4172 sugar (and other) transporter family protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_1151 major Facilitator Superfamily protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_4997 major Facilitator Superfamily protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_4200 H+ antiporter-2 family protein K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_2088 major Facilitator Superfamily protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D VK055_0928 sugar (and other) transporter family protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D VK055_1555 sugar (and other) transporter family protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D VK055_5125 ybtX; major Facilitator Superfamily protein K05373 ybtX; MFS transporter, putative signal transducer
D VK055_3721 hypothetical protein K06141 tsgA; MFS transporter, TsgA protein
D VK055_3723 major Facilitator Superfamily protein K06141 tsgA; MFS transporter, TsgA protein
D VK055_0667 sugar (and other) transporter family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D VK055_4748 PTS enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VK055_4287 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VK055_4749 ptsH; HPr K02784 ptsH; phosphocarrier protein HPr
D VK055_3861 phosphocarrier, HPr family protein K08485 ptsO; phosphocarrier protein NPr
D VK055_1467 fused predicted PTS system enzymes: Hpr component, enzyme I component, enzyme IIA component K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-]
D VK055_4922 phosphocarrier, HPr family protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VK055_4747 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VK055_1366 ptsG; ptsG K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VK055_2118 PTS system, glucose-like IIB component domain protein K02778 ptsGb; glucose PTS system EIIB component [EC:2.7.1.199]
D VK055_1831 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VK055_0994 phosphotransferase system, EIIC family protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_0995 PTS system, glucose-like IIB component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D VK055_2035 sacX; negative regulator of sacY activity K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VK055_4945 PTS system, beta-glucoside-specific IIABC component family protein K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D VK055_4463 PTS system, maltose and glucose-specific subfamily, IIC component domain protein K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D VK055_2812 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VK055_3422 phosphotransferase system, EIIC family protein K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VK055_0799 PTS system, glucose-like IIB component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_3379 PTS system, alpha-glucoside-specific IIBC component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_3452 PTS system, glucose-like IIB component domain protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D VK055_0751 fruA; PTS system, fructose subfamily, IIA component domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VK055_0753 PTS system, Fru family, IIC component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VK055_4924 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VK055_0752 frwB; frwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VK055_1469 frwB2; frwB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D VK055_1472 frwB3; frwB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D VK055_1468 PTS system, Fru family, IIC component domain protein K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VK055_0803 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VK055_3528 mtlA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VK055_0666 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_3107 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_3409 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_1225 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_4439 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VK055_0665 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_3106 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_3411 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_2816 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_1228 licB; lichenan-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_4441 gmuB; oligo-beta-mannoside-specific phosphotransferaseenzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VK055_0660 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_2612 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_3410 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_2814 celB2; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VK055_4274 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_1226 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VK055_4440 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_4442 PTS system, lactose/cellobiose IIC component family protein K02761 celB; cellobiose PTS system EIIC component
D VK055_1339 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D VK055_4477 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D VK055_4478 PTS system, glucitol/sorbitol-specific, IIBC component family protein K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D VK055_4479 srlA; PTS system, glucitol/sorbitol-specific, IIC component family protein K02783 srlA; glucitol/sorbitol PTS system EIIC component
D VK055_2303 PTS system sugar-specific permease component family protein K02775 gatC; galactitol PTS system EIIC component
D VK055_0117 manX; manX K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D VK055_0116 manY; manY K02795 manY; mannose PTS system EIIC component
D VK055_0115 manZ; manZ K02796 manZ; mannose PTS system EIID component
D VK055_2631 putative PTS permease K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D VK055_2630 PTS system sorbose subIIB component family protein K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D VK055_2629 PTS system sorbose-specific iic component familyprotein K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D VK055_2628 PTS system mannose/fructose/sorbose IID component family protein K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D VK055_3068 PTS system, mannose/fructose/sorbose family, IIAcomponent domain protein K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D VK055_3069 manX2; manX K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D VK055_3070 manY2; manY K02814 sorA; sorbose PTS system EIIC component
D VK055_3071 manZ2; manZ K02815 sorM; sorbose PTS system EIID component
D VK055_2202 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_2875 ulaC; ulaC K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_0747 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VK055_2203 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_2876 sgaB; ulaB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_0748 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VK055_2204 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D VK055_2877 ulaA; ulaA K03475 ulaA; ascorbate PTS system EIIC component
D VK055_0749 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D VK055_3863 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VK055_3971 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D VK055_1578 aqpZ; aqpZ - water MIP channel K06188 aqpZ; aquaporin Z
D VK055_3985 glpF; glpF - glycerol MIP channel K02440 glpF; glycerol uptake facilitator
D VK055_3458 glpF2; glpF - glycerol MIP channel K02440 glpF; glycerol uptake facilitator
D VK055_4324 glpF3; glpF - glycerol MIP channel K27261 pduF; propanediol uptake facilitator
D VK055_0263 ion transport family protein K10716 kch; voltage-gated potassium channel
D VK055_2138 amtB; amtB ammonium Amt transporter AmtB K03320 amt; ammonium transporter, Amt family
D VK055_4196 ammonium Transporter family protein K03320 amt; ammonium transporter, Amt family
D VK055_0504 bphK; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_3004 glutathione S-transferase, C-terminal domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_3603 glutathione S-transferase, C-terminal domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_1657 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_2305 glutathione S-transferase, C-terminal domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_4824 glutathione S-transferase, N-terminal domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VK055_3849 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D VK055_1486 putative carrier/transport protein substrate/modulator of FtsH-mediated proteolysis K19416 yccA; modulator of FtsH protease
D VK055_1552 focA; formate transporter FocA K06212 focA; formate transporter
D VK055_3782 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D VK055_2103 kefA K05802 mscK; potassium-dependent mechanosensitive channel
D VK055_2909 mechanosensitive ion channel family protein K22051 mscM; miniconductance mechanosensitive channel
D VK055_4129 yggB; mechanosensitive channel MscS K03442 mscS; small conductance mechanosensitive channel
D VK055_1692 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D VK055_1947 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D VK055_1996 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D VK055_3614 CBS domain protein K06213 mgtE; magnesium transporter
D VK055_4890 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D VK055_4189 yut; urea transporter K08717 utp; urea transporter
D VK055_4048 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D VK055_4049 exbD; tonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D VK055_1785 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D VK055_1784 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D VK055_3162 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D VK055_1063 corA-like Mg2+ transporter family protein K16074 zntB; zinc transporter
D VK055_0997 corA-like Mg2+ transporter family protein K16074 zntB; zinc transporter
D VK055_1875 crcB-like family protein K06199 crcB; fluoride exporter
D VK055_4204 crcB-like family protein K06199 crcB; fluoride exporter
D VK055_4205 crcB-like family protein K06199 crcB; fluoride exporter
D VK055_0657 bestrophin, RFP-TM, chloride channel family protein K08994 yneE; ion channel-forming bestrophin family protein
D VK055_2850 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VK055_4565 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VK055_1527 ompC3; outer membrane protein C K09476 ompF; outer membrane pore protein F
D VK055_2278 gram-negative porin family protein K11929 phoE; outer membrane pore protein E
D VK055_4885 ompC4; outer membrane protein C K09475 ompC; outer membrane pore protein C
D VK055_1057 ompC2; outer membrane protein C K14062 ompN; outer membrane protein N
D VK055_0013 ompC; outer membrane protein C K14062 ompN; outer membrane protein N
D VK055_3408 lamB porin family protein K02024 lamB; maltoporin
D VK055_3048 phage lambda receptor protein maltose high-affinity receptor K02024 lamB; maltoporin
D VK055_2117 lamB porin family protein K02024 lamB; maltoporin
D VK055_2721 lamB porin family protein K02024 lamB; maltoporin
D VK055_0591 scrY; sucrose porin K16077 scrY; sucrose porin
D VK055_2034 scrY2; sucrose porin K16077 scrY; sucrose porin
D VK055_4443 lamB porin family protein K16077 scrY; sucrose porin
D VK055_3347 lamB porin family protein K10124 bglH; carbohydrate-specific outer membrane porin
D VK055_1501 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VK055_1685 ail; attachment invasion locus protein K11934 ompX; outer membrane protein X
D VK055_4787 47 kDa outer membrane protein K06076 fadL; long-chain fatty acid transport protein
D VK055_2191 nucleoside-specific channel-forming, Tsx familyprotein K05517 tsx; nucleoside-specific channel-forming protein
D VK055_2995 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2927 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4230 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4244 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2288 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4532 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4535 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4073 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_0816 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_5105 iroN; tonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D VK055_1213 tonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D VK055_3022 tonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D VK055_1934 fepA; tonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D VK055_1207 putative outer membrane receptor for iron transport K16090 fiu; catecholate siderophore receptor
D VK055_3221 btuB; tonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D VK055_5116 fyuA; tonB-dependent siderophore receptor family protein K15721 fyuA; pesticin/yersiniabactin receptor
D VK055_4930 tonB dependent receptor family protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D VK055_4427 tonB dependent receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VK055_0356 tonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VK055_1357 tonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VK055_2400 fhuA outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VK055_0573 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VK055_2003 fcuA; ferrichrome receptor fcuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VK055_0148 tonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VK055_2705 outer membrane factor of the CusCFBA copper/silver efflux system K07796 cusC; outer membrane protein, copper/silver efflux system
D VK055_4025 tolC; tolC outer membrane channel K12340 tolC; outer membrane protein
D VK055_3425 putative efflux pump outer membrane protein ttgC K18139 oprM; outer membrane protein, multidrug efflux system
D VK055_1024 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D VK055_4220 putative outer membrane factor of efflux pump K15550 mdtP; outer membrane protein, multidrug efflux system
D VK055_5015 wza; putative outer membrane lipoprotein Wza K01991 wza; polysaccharide biosynthesis/export protein
D VK055_4943 carbohydrate-selective porin, OprB family protein K07267 oprB; porin
D VK055_2375 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D VK055_3017 yaeT2; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D VK055_4658 yfgL; outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D VK055_4700 nlpB/DapX lipofamily protein K07287 bamC; outer membrane protein assembly factor BamC
D VK055_4582 bamD K05807 bamD; outer membrane protein assembly factor BamD
D VK055_4560 smpA; smpA K06186 bamE; outer membrane protein assembly factor BamE
D VK055_2848 ytfM; outer membrane protein K07278 tamA; translocation and assembly module TamA
D VK055_2847 hypothetical protein K09800 tamB; translocation and assembly module TamB
D VK055_4255 oligogalacturonate-specific porin family protein K22110 kdgM; oligogalacturonate-specific porin family protein
D VK055_3867 lptA; lipopolysaccharide transport periplasmic proteinLptA K09774 lptA; lipopolysaccharide export system protein LptA
D VK055_3868 yrbK; lptC K11719 lptC; lipopolysaccharide export system protein LptC
D VK055_2523 lptD; exported protein required for envelope biosynthesis and integrity K04744 lptD; LPS-assembly protein
D VK055_1859 rare lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D VK055_3578 TPR repeat family protein K20543 bcsC; cellulose synthase operon protein C
D VK055_3589 tetratricopeptide repeat family protein K20543 bcsC; cellulose synthase operon protein C
D VK055_1848 transporter associated domain protein K06189 corC; hemolysin (HlyC) family protein
D VK055_3000 lrgA family protein K06518 cidA; holin-like protein
D VK055_4941 lrgA family protein K06518 cidA; holin-like protein
D VK055_4322 BMC domain protein K27260 pduA; bacterial microcompartment shell protein
D VK055_4720 BMC domain protein K04027 eutM; ethanolamine utilization protein EutM
D VK055_2960 gph4; sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein K11104 melB; melibiose permease
D VK055_0047 major Facilitator Superfamily protein K16210 togT; oligogalacturonide transporter
D VK055_0057 major Facilitator Superfamily protein K16210 togT; oligogalacturonide transporter
D VK055_2002 amino acid permease family protein K11732 pheP; phenylalanine-specific permease
D VK055_4928 amino acid permease family protein K11733 lysP; lysine-specific permease
D VK055_1068 amino acid permease family protein K11734 aroP; aromatic amino acid transport protein AroP
D VK055_2455 amino acid permease family protein K11734 aroP; aromatic amino acid transport protein AroP
D VK055_2312 gabP; GABA permease K11735 gabP; GABA permease
D VK055_2212 amino acid permease family protein K11736 proY; proline-specific permease ProY
D VK055_2863 amino acid permease family protein K11737 cycA; D-serine/D-alanine/glycine transporter
D VK055_0576 amino acid permease family protein K11738 ansP; L-asparagine permease
D VK055_1734 amino acid permease family protein K16234 hutT; histidine transporter
D VK055_2247 amino acid permease family protein K16235 mmuP; S-methylmethionine transporter
D VK055_1455 puuP; putrescine importer K14052 puuP; putrescine importer
D VK055_2052 yjdE; adiC K03757 cadB; cadaverine:lysine antiporter
D VK055_0982 transporter, basic amino acid/polyamine antiporter family protein K03758 arcD; arginine:ornithine antiporter / lysine permease
D VK055_2248 eat; ethanolamine permease K16238 eat; ethanolamine permease
D VK055_2933 amino acid permease family protein K16263 yjeH; amino acid efflux transporter
D VK055_1771 cation diffusion facilitator transporter family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D VK055_3255 fieF; yiiP K13283 fieF; ferrous-iron efflux pump FieF
D VK055_4021 zupT; zn transport protein K07238 TC.ZIP; zinc transporter, ZIP family
D VK055_2708 cusA K07787 cusA; copper/silver efflux system protein
D VK055_3426 acrB3; acrB RND-type permease K18138 acrB; multidrug efflux pump
D VK055_2106 acrB; acrB RND-type permease K18138 acrB; multidrug efflux pump
D VK055_1978 bepE; efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VK055_4708 acrD; acrD K18324 acrD; multidrug efflux pump
D VK055_3802 acrB2; acrB RND-type permease K18142 acrF; multidrug efflux pump
D VK055_0440 acrB/AcrD/AcrF family protein K21134 triC; multidrug efflux pump
D VK055_4551 RND transporter, hydrophobe/amphiphile efflux-1 family protein K19585 oqxB; multidrug efflux pump
D VK055_4999 MMPL family protein K07788 mdtB; multidrug efflux pump
D VK055_4998 MMPL family protein K07789 mdtC; multidrug efflux pump
D VK055_2916 small Multidrug Resistance family protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D VK055_0936 mdtI; mdtI SMR Protein K11742 mdtI; spermidine export protein MdtI
D VK055_0937 mdtJ; mdtJ SMR protein K11743 mdtJ; spermidine export protein MdtJ
D VK055_0873 triose-phosphate Transporter family protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D VK055_4240 triose-phosphate Transporter family protein K15269 pecM; probable blue pigment (indigoidine) exporter
D VK055_1687 eamA-like transporter family protein K11939 rhtA; inner membrane transporter RhtA
D VK055_3261 rhaT L-rhamnose-proton symporter family protein K02856 rhaT; L-rhamnose-H+ transport protein
D VK055_3161 eamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD
D VK055_0565 putative inner membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D VK055_3628 hypothetical protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D VK055_0915 ynfA; inner membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D VK055_3686 gntT; gntT Gluconate Gnt transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D VK055_3385 dsdX Gnt transporter K13629 dsdX; D-serine transporter
D VK055_3671 gntU; gntU gluconate Gnt transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter
D VK055_0897 H+ symporter family protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VK055_1340 2-keto-3-deoxygluconate permease family protein K02526 kdgT; 2-keto-3-deoxygluconate permease
D VK055_2936 transporter, anaerobic C4-dicarboxylate uptake family protein K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D VK055_3108 transporter, anaerobic C4-dicarboxylate uptake family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VK055_3523 lldP lactate transporter K00427 lldP; L-lactate permease
D VK055_1950 transporter, betaine/carnitine/choline transporter family protein K02168 betT; choline/glycine/proline betaine transport protein
D VK055_0537 tdt; C4-dicarboxylate transporter/malic acid transport family protein K03304 tehA; tellurite resistance protein
D VK055_0221 chaA calcium CaCA transporter K07300 chaA; Ca2+:H+ antiporter
D VK055_3871 yrbG CaCA transporter K07301 yrbG; cation:H+ antiporter
D VK055_3612 phosphate transporter family protein K16322 pit; low-affinity inorganic phosphate transporter
D VK055_3809 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D VK055_1434 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D VK055_2992 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D VK055_2988 gltT; proton/sodium-glutamate symport protein K11102 gltP; proton glutamate symport protein
D VK055_3591 dctA; dctA dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D VK055_3951 sstT; sstT transporter K07862 sstT; serine/threonine transporter
D VK055_3456 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D VK055_2558 nhaA; na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D VK055_0138 nhaB; na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D VK055_3002 na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D VK055_5137 na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D VK055_0145 transporter associated domain protein K11105 cvrA; potassium/hydrogen antiporter
D VK055_2530 kefC potassium CPA2 transporter K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D VK055_2531 ywrO; general stress protein 14 K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D VK055_3738 proton antiporter-2 family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VK055_3737 flavodoxin-like fold family protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VK055_2090 proton antiporter-2 family protein K26735 KEA4_5_6; K+:H+ antiporter
D VK055_3132 potassium uptake, TrkH family protein K03498 trkH; trk/ktr system potassium uptake protein
D VK055_3783 NAD-dependent glycerol-3-phosphate dehydrogenasefamily protein K03499 trkA; trk/ktr system potassium uptake protein
D VK055_1900 permease for cytosine/purines, uracil, thiamine,allantoin family protein K10974 codB; cytosine permease
D VK055_4690 uracil-xanthine permease family protein K02824 uraA; uracil permease
D VK055_1445 rutG; pyrimidine utilization transport protein G K09016 rutG; putative pyrimidine permease RutG
D VK055_0823 pbuX; xanthine permease family protein K16345 xanP; xanthine permease XanP
D VK055_3454 yicE; xanP xanthine NCS2 transporter K16345 xanP; xanthine permease XanP
D VK055_3003 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VK055_3351 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VK055_4968 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VK055_4768 nucleoside transporter, NupC family protein K11535 nupC; nucleoside transport protein
D VK055_0040 tyrP; tyrosine ArAAP transporter K03834 tyrP; tyrosine-specific transport protein
D VK055_3910 mtr; mtr tryptophan ArAAP transporter K03835 mtr; tryptophan-specific transport protein
D VK055_1523 sdaC; sdaC serine STP transporter K03837 sdaC; serine transporter
D VK055_4375 sdaC3; sdaC serine STP transporter K03837 sdaC; serine transporter
D VK055_0162 tdcC; tdcC threonine STP transporter K03838 tdcC; threonine transporter
D VK055_0542 benzoate transporter family protein K05782 benE; benzoate membrane transport protein
D VK055_0956 ygjE tartrate/succinate DASS transporter TtdT tartrate/succinate DASS transporter K11106 ttdT; L-tartrate/succinate antiporter
D VK055_2395 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D VK055_3475 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D VK055_0925 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D VK055_4772 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D VK055_4468 hoxN; high-affinity nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D VK055_0210 sulP; sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D VK055_4891 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family
D VK055_4769 mntH; mntH manganese ion transporter K03322 mntH; manganese transport protein
D VK055_3074 pnaS; sodium-dependent inorganic phosphate (Pi) transporter family protein K03324 yjbB; phosphate:Na+ symporter
D VK055_4216 arsB; arsB K03893 arsB; arsenical pump membrane protein
D VK055_1878 dcuC; dcuC dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D VK055_3183 polysaccharide biosynthesis family protein K16693 wzxE; enterobacterial common antigen flippase
D VK055_5022 wzx; polysaccharide biosynthesis family protein K16695 wzxC; lipopolysaccharide exporter
D VK055_1385 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D VK055_0944 auxin efflux carrier family protein K13936 mdcF; malonate transporter and related proteins
D VK055_4430 membrane transport family protein K13936 mdcF; malonate transporter and related proteins
D VK055_3321 kup; potassium uptake protein K03549 kup; KUP system potassium uptake protein
D VK055_4130 lysE; L-lysine exporter family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D VK055_3155 homoserine/Threonine efflux family protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VK055_3157 homoserine/Threonine efflux family protein K05835 rhtC; threonine efflux protein
D VK055_0460 lysE type translocator family protein K05835 rhtC; threonine efflux protein
D VK055_2670 lysE type translocator family protein K05835 rhtC; threonine efflux protein
D VK055_2333 lysE type translocator family protein K11249 eamB; cysteine/O-acetylserine efflux protein
D VK055_1294 leuE leucine RhtB transporter K11250 leuE; leucine efflux protein
D VK055_3056 azlC family protein K26605 azlC; branched chain amino acid efflux pump
D VK055_4506 ygaZ; ygaZ L-valine LIV-E exporter K26605 azlC; branched chain amino acid efflux pump
D VK055_3277 azlC family protein K26605 azlC; branched chain amino acid efflux pump
D VK055_3278 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump
D VK055_3057 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump
D VK055_4505 ygaH; ygaH L-valine exporter K26606 azlD; branched chain amino acid efflux pump
D VK055_3828 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D VK055_4221 fusaric acid resistance protein-like family protein K15547 mdtO; multidrug resistance protein MdtO
D VK055_4696 hypothetical protein K03548 perM; putative permease
D VK055_3633 conserved hypothetical integral membrane family protein K09125 yhhQ; queuosine precursor transporter
D VK055_0868 marC; inner membrane protein involved in multiple antibiotic resistance K05595 marC; multiple antibiotic resistance protein
D VK055_2479 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VK055_0113 hypothetical protein K23242 mntP; manganese efflux pump family protein
D VK055_1430 efeU; ferrous iron permease efeU K07243 FTR; high-affinity iron transporter
D VK055_1429 hypothetical protein K07224 efeO; iron uptake system component EfeO
D VK055_1428 heme-containing peroxidase/deferrochelatase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D VK055_2129 high-affinity nickel-transport family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D VK055_4634 high-affinity nickel-transport family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D VK055_4239 high-affinity nickel-transport family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D VK055_2663 carbon starvation CstA family protein K23676 btsT; pyruvate/proton symporter
D VK055_0270 tonB protein energy transducer K03832 tonB; periplasmic protein TonB
D VK055_1781 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D VK055_1783 tolA; protein TolA K03646 tolA; colicin import membrane protein
D VK055_1782 tolB; tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D VK055_2545 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VK055_3841 oadB2; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VK055_2544 oadA; oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VK055_3840 oadA2; oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VK055_3839 oadG2; oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VK055_2543 oadG; oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VK055_0939 mdcA; malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D VK055_0941 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D VK055_4150 cytochrome C biogenesis transmembrane region family protein K08344 scsB; suppressor for copper-sensitivity B
D VK055_0603 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0238 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0602 narH2; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0239 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0600 narI2; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0242 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D VK055_0616 molybdopterin oxidoreductase family protein K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D VK055_0617 formate dehydrogenase, alpha subunit K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D VK055_0618 fdxH2; formate dehydrogenase, beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D VK055_0619 formate dehydrogenase, gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit
D VK055_0922 dimethyl sulfoxide reductase, chain C K07312 ynfH; Tat-targeted selenate reductase subunit YnfH
D VK055_0920 dmsA; dimethyl sulfoxide reductase, chain A K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9]
D VK055_1559 dmsA2; dimethyl sulfoxide reductase, chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D VK055_0921 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VK055_1558 dmsB2; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VK055_1557 dimethyl sulfoxide reductase, chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D VK055_1891 dmsA3; dimethyl sulfoxide reductase, chain A K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D VK055_3561 biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D VK055_0714 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D VK055_4502 emrA Membrane Fusion Protein K03543 emrA; membrane fusion protein, multidrug efflux system
D VK055_4222 putative membrane fusion protein of efflux pump K15549 mdtN; membrane fusion protein, multidrug efflux system
D VK055_2707 membrane fusion protein of the CusCFBA copper efflux system K07798 cusB; membrane fusion protein, copper/silver efflux system
D VK055_2922 hlyD secretion family protein K13408 cvaA; membrane fusion protein
D VK055_3427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_2105 acrA; acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_3803 acrA2; acrA Membrane Fusion Protein K18141 acrE; membrane fusion protein, multidrug efflux system
D VK055_1760 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D VK055_0439 efflux transporter, RND family, MFP subunit K21137 triB; membrane fusion protein, multidrug efflux system
D VK055_4552 efflux transporter, RND family, MFP subunit K19586 oqxA; membrane fusion protein, multidrug efflux system
D VK055_5000 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D VK055_1575 macA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D VK055_3827 aaeA; aaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System Protein A K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D VK055_5017 etk; tyrosine-protein kinase etk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VK055_1770 pnuC; nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D VK055_3693 hypothetical protein K04758 feoA; ferrous iron transport protein A
D VK055_3692 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D VK055_3691 feoC like transcriptional regulator family protein K07490 feoC; ferrous iron transport protein C
D VK055_2237 ABC transporter transmembrane region 2 family protein K17938 sbmA; peptide/bleomycin uptake transporter
D VK055_3611 universal stress B family protein K06144 uspB; universal stress protein B
D VK055_2918 entericidin EcnA/B family protein K16347 ecnA; entericidin A
D VK055_0398 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VK055_0668 mgtC; mg2+ transport protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D VK055_0821 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D VK055_2060 uraH2; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D VK055_0091 copper resistance D family protein K07245 pcoD; copper resistance protein D
D VK055_0090 copC domain protein K07156 copC; copper resistance protein C
D VK055_1266 yeaF; scaffolding protein that interacts with murein polymerase and murein hydrolase K07274 mipA; MipA family protein
D VK055_0436 mltA-interacting MipA family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:kpt02044]
D VK055_4025 tolC; tolC outer membrane channel K12340 tolC; outer membrane protein
D VK055_2922 hlyD secretion family protein K13408 cvaA; membrane fusion protein
D VK055_2923 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D VK055_2404 putative general secretion pathway protein B K02451 gspB; general secretion pathway protein B
D VK055_2407 gspC; type II secretion system protein C K02452 gspC; general secretion pathway protein C
D VK055_2408 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D VK055_2409 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VK055_2410 gspF; type II secretion system protein F K02455 gspF; general secretion pathway protein F
D VK055_2411 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D VK055_2412 gspH; type II secretion system protein H K02457 gspH; general secretion pathway protein H
D VK055_2413 gspI; type II secretion system protein I K02458 gspI; general secretion pathway protein I
D VK055_2414 gspJ; type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D VK055_2415 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K
D VK055_2416 gspL; type II secretion system protein L K02461 gspL; general secretion pathway protein L
D VK055_2417 type II secretion system (T2SS), M family protein K02462 gspM; general secretion pathway protein M
D VK055_2418 type II secretion system (T2SS), N family protein K02463 gspN; general secretion pathway protein N
D VK055_2419 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D VK055_2403 lipo, PulS/OutS family protein K02465 gspS; general secretion pathway protein S
D VK055_4094 putative transporter K02669 pilT; twitching motility protein PilT
D VK055_4290 putative prepilin peptidase dependent protein A K02679 ppdA; prepilin peptidase dependent protein A
D VK055_4291 prepilin-type N-terminal cleavage/methylation domain protein K02680 ppdB; prepilin peptidase dependent protein B
D VK055_4293 prepilin-type N-terminal cleavage/methylation domain protein K02681 ppdC; prepilin peptidase dependent protein C
D VK055_2461 prepilin-type N-terminal cleavage/methylation domain protein K02682 ppdD; prepilin peptidase dependent protein D
D VK055_2462 type II/IV secretion system family protein K02504 hofB; protein transport protein HofB
D VK055_2463 type II secretion system (T2SS), F family protein K02505 hofC; protein transport protein HofC
D VK055_3705 hypothetical protein K12288 hofM; pilus assembly protein HofM
D VK055_3706 fimbrial assembly family protein K12289 hofN; pilus assembly protein HofN
D VK055_3707 hypothetical protein K12290 hofO; pilus assembly protein HofO
D VK055_3708 hofQ; protein involved in utilization of DNA as a carbon source K02507 hofQ; protein transport protein HofQ
D VK055_4092 putative inner membrane protein K02221 yggT; YggT family protein
D VK055_2148 competence ComEA helix-hairpin-helix repeat region domain protein K02237 comEA; competence protein ComEA
D VK055_2149 hypothetical protein K02237 comEA; competence protein ComEA
D VK055_1544 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D VK055_5091 trbC/VIRB2 family protein K03197 virB2; type IV secretion system protein VirB2
D VK055_5090 type IV secretory pathway, VirB3-like family protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D VK055_5089 type IV secretion system family protein K03200 virB5; type IV secretion system protein VirB5
D VK055_5087 trbL/VirB6 plasmid conjugal transfer family protein K03201 virB6; type IV secretion system protein VirB6
D VK055_5086 virB8 family protein K03203 virB8; type IV secretion system protein VirB8
D VK055_5085 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9
D VK055_5084 bacterial conjugation TrbI-like family protein K03195 virB10; type IV secretion system protein VirB10
D VK055_5083 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D VK055_4161 dsbC; dsbCreduced K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VK055_4669 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D VK055_4671 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D VK055_0198 icmF2; intracellular multiplication and human macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D VK055_1093 intracellular multiplication and human macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D VK055_0183 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D VK055_1103 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D VK055_0182 impJ2; type VI secretion system protein, DUF876 K11893 impJ; type VI secretion system protein ImpJ
D VK055_1104 impJ; type VI secretion system protein K11893 impJ; type VI secretion system protein ImpJ
D VK055_0200 impH2; type VI secretion system protein DUF1305 K11895 impH; type VI secretion system protein ImpH
D VK055_1090 impH; type VI secretion system protein K11895 impH; type VI secretion system protein ImpH
D VK055_0199 impG2; type VI secretion system protein DUF879 K11896 impG; type VI secretion system protein ImpG
D VK055_1091 impG; type VI secretion system protein DUF879 K11896 impG; type VI secretion system protein ImpG
D VK055_1105 impC2; type VI secretion system protein K11900 impC; type VI secretion system protein ImpC
D VK055_1106 impC1; type VI secretion system protein K11900 impC; type VI secretion system protein ImpC
D VK055_1107 impB; type VI secretion system protein K11901 impB; type VI secretion system protein ImpB
D VK055_1132 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D VK055_0741 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D VK055_1101 hcp1; type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D VK055_0186 vgrG2; valine-glycine repeat protein G K11904 vgrG; type VI secretion system secreted protein VgrG
D VK055_1099 vgrG; type VI secretion valine-glycine repeat protein G K11904 vgrG; type VI secretion system secreted protein VgrG
D VK055_0202 gene 25-like lysozyme family protein K11905 K11905; type VI secretion system protein
D VK055_0201 sciN2; type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D VK055_1089 sciN; type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D VK055_1100 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D VK055_1092 impA-related N-terminal family protein K11910 vasJ; type VI secretion system protein VasJ
D VK055_0203 impA2; impA-related N-terminal family protein K11911 vasL; type VI secretion system protein VasL
D VK055_2290 fim; fimbrial subunit type 1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_2925 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_4233 fim2; fimbrial subunit type 1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_4242 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_4530 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_4537 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_0814 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_2928 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_2289 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_4231 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_4072 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_2995 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2927 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4230 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4244 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2288 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4532 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4535 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4073 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_0816 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4229 fimbrial family protein K07348 fimF; minor fimbrial subunit
D VK055_4228 fimbrial family protein K07349 fimG; minor fimbrial subunit
D VK055_4227 fimH2; minor fimbrial subunit, D-mannose specific adhesin K07350 fimH; minor fimbrial subunit
D VK055_2287 fimH; minor fimbrial subunit, D-mannose specific adhesin K07350 fimH; minor fimbrial subunit
D VK055_2266 putative fimbrillin MatB K21964 ecpA; Mat/Ecp fimbriae major subunit
D VK055_2265 hypothetical protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D VK055_2264 putative enzyme K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D VK055_2263 putative receptor K21967 ecpD; Mat/Ecp fimbriae adhesin
D VK055_2262 gram-negative pili assembly chaperone, N-terminal domain protein K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone
D VK055_2469 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VK055_3517 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D VK055_2195 secD; secD K03072 secD; preprotein translocase subunit SecD
D VK055_3116 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VK055_2194 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VK055_3892 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VK055_2470 secretion monitor family protein K13301 secM; secretion monitor
D VK055_3775 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VK055_4567 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VK055_3640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VK055_2196 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D VK055_3358 oxaA; inner-membrane protein insertion factor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VK055_3143 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D VK055_3142 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D VK055_1873 ybeC; tatE K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:kpt02042]
D VK055_2850 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VK055_4565 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VK055_4155 channel, hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:kpt02022]
D VK055_2215 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VK055_2216 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VK055_1327 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D VK055_1326 transcriptional regulatory, C terminal family protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D VK055_5004 transcriptional regulatory, C terminal family protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D VK055_3697 envZ; envZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VK055_3696 ompR; ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VK055_0987 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VK055_0985 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D VK055_3258 cpxA; sensory histidine kinase in two-component regulatory system with CpxR K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VK055_3257 cpxR; response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VK055_2577 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D VK055_2578 transcriptional regulatory, C terminal family protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D VK055_4996 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D VK055_4995 transcriptional regulatory, C terminal family protein K07664 baeR; two-component system, OmpR family, response regulator BaeR
D VK055_1725 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D VK055_1724 basR; transcriptional regulatory protein BasR K07771 basR; two-component system, OmpR family, response regulator BasR
D VK055_2703 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VK055_2704 copR; transcriptional activator protein CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VK055_4033 qseC; sensor protein qseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VK055_4034 qseB transcriptional activator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VK055_1817 kdpD, KdpD-Phis K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VK055_1819 transcriptional regulatory, C terminal family protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VK055_3858 arcB; aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VK055_2575 arcA; arcA transcriptional dual regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VK055_0682 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D VK055_1598 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D VK055_0235 HAMP domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D VK055_0233 narL; narL transcriptional dual regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VK055_3394 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VK055_3393 uhpA; uhpA transcriptional activator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D VK055_4882 his Kinase A domain protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D VK055_4884 putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D VK055_4883 rcsB; rcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D VK055_4386 barA; hybrid sensory histidine kinase, in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VK055_0032 bacterial regulatory, luxR family protein K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VK055_3989 evgS; evgS-Phis K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VK055_4177 evgS2; evgS-Phis K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VK055_3990 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4175 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4178 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4202 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_2520 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VK055_2546 dpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VK055_2521 dpiA; dpiA-phosphorylated DNA binding transcriptional dual regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D VK055_2547 dpiA2; dpiA-phosphorylated DNA binding transcriptional dual regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D VK055_0951 yjdH; sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration product K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D VK055_0953 response regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D VK055_4776 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VK055_4960 histidine kinase-, DNA gyrase B-, and HSP90-likeATPase family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VK055_4775 mrkE; protein mrkE K02477 K02477; two-component system, LytTR family, response regulator
D VK055_4961 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D VK055_3296 glnL; ntrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VK055_3297 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VK055_3089 his Kinase A domain protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VK055_3087 response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D VK055_4881 response regulator K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D VK055_4620 putative sensory kinase in two-component system K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D VK055_4622 yfhA; response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D VK055_0249 hnr; regulator of RpoS K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:kpt02035]
D VK055_0026 bacterial extracellular solute-binding, 3 familyprotein K02424 tcyA; L-cystine transport system substrate-binding protein
D VK055_4094 putative transporter K02669 pilT; twitching motility protein PilT
D VK055_2290 fim; fimbrial subunit type 1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_2925 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_4233 fim2; fimbrial subunit type 1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_4242 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_4530 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_4537 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_0814 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_2928 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D VK055_2289 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_4231 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_4072 gram-negative pili assembly chaperone, C-terminal domain protein K07346 fimC; fimbrial chaperone protein
D VK055_2995 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2927 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4230 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4244 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_2288 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4532 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4535 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4073 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_0816 type VII secretion system (T7SS), usher family protein K07347 fimD; outer membrane usher protein
D VK055_4229 fimbrial family protein K07348 fimF; minor fimbrial subunit
D VK055_4228 fimbrial family protein K07349 fimG; minor fimbrial subunit
D VK055_4227 fimH2; minor fimbrial subunit, D-mannose specific adhesin K07350 fimH; minor fimbrial subunit
D VK055_2287 fimH; minor fimbrial subunit, D-mannose specific adhesin K07350 fimH; minor fimbrial subunit
D VK055_4232 fimbrial family protein K07351 fimI; fimbrial protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:kpt04812]
D VK055_3818 mreB; mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VK055_2958 stbA family protein K18640 parM; plasmid segregation protein ParM
D VK055_2472 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VK055_2473 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VK055_0132 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VK055_0131 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VK055_0130 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D VK055_5153 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:kpt04147]
D VK055_2094 htpG; htpG K04079 HSP90A; molecular chaperone HtpG
D VK055_4391 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VK055_1006 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VK055_1263 gap2; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VK055_4127 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VK055_0078 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VK055_0327 pyk2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VK055_3725 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VK055_0680 dipeptidase AC. Metallo peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D VK055_2201 ahpC/TSA family protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D VK055_2930 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VK055_2560 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VK055_3061 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VK055_3487 SMP-30/Gluconolaconase/LRE-like region family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VK055_4665 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VK055_3117 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D VK055_3750 tuf2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D VK055_1365 ycfF; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VK055_0858 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VK055_4755 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D VK055_0128 fadD; fadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VK055_0413 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_0789 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4254 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_4877 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VK055_5058 S-adenosyl-L-homocysteine hydrolase, NAD bindingdomain protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D VK055_2093 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VK055_2098 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VK055_3227 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VK055_3898 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VK055_4065 metC3; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D VK055_2839 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VK055_1765 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VK055_3673 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VK055_3457 glpK2; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VK055_1945 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VK055_3295 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VK055_2240 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VK055_2229 phoA; alkaline phosphatase H K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VK055_0864 gyaR; glyoxylate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_2302 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_1897 S-adenosyl-L-homocysteine hydrolase, NAD bindingdomain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_4135 serA; serA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VK055_3086 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VK055_2296 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_2450 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VK055_1018 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D VK055_0081 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VK055_3463 tpiA2; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VK055_1767 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D VK055_2917 blc2; blc outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
D VK055_2710 blc; blc outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:kpt02048]
D VK055_0385 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D VK055_0386 cas2; CRISPR-associated endoribonuclease Cas2, subtypeI-E/ECOLI K09951 cas2; CRISPR-associated protein Cas2
D VK055_0379 cas3; CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D VK055_0380 casA; CRISPR type I-E/ECOLI-associated protein CasA/Cse1 K19123 casA; CRISPR system Cascade subunit CasA
D VK055_0381 casB; CRISPR type I-E/ECOLI-associated protein CasB/Cse2 K19046 casB; CRISPR system Cascade subunit CasB
D VK055_0383 cas7; CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI K19124 casC; CRISPR system Cascade subunit CasC
D VK055_0384 cas5e; CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI K19125 casD; CRISPR system Cascade subunit CasD
D VK055_0382 cas6e; CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI K19126 casE; CRISPR system Cascade subunit CasE
D VK055_1639 dam; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_3712 dam3; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_5159 dam2; DNA adenine methylase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VK055_0016 dcm; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_5150 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VK055_2725 HNH endonuclease family protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D VK055_2743 restriction endonuclease family protein K07448 mrr; restriction system protein
D VK055_3548 hok/gef family protein K18920 hokA; protein HokA
D VK055_4421 hokE; hokE K18922 hokE; protein HokE
D VK055_4460 toxin SymE, type I toxin-antitoxin system familyprotein K19048 symE; toxic protein SymE
D VK055_2820 addiction module toxin, RelE/StbE family protein K06218 relE; mRNA interferase RelE/StbE
D VK055_2821 relB; qin prophage antitoxin of the RelE-RelB toxin-antitoxin system and transcriptional repressor of relBEF K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D VK055_0819 hipA; serine/threonine kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VK055_0820 hipB Polypeptide K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D VK055_2108 hemolysin expression modulating family protein K05839 hha; haemolysin expression modulating protein
D VK055_2107 ybaJ; protein that modulates Hha toxicity K19162 tomB; hha toxicity modulator TomB
D VK055_1148 pspC; phage shock protein C K03973 pspC; phage shock protein C
D VK055_1149 pspB; phage shock protein B K03970 pspB; phage shock protein B
D VK055_0620 ccdB family protein K19163 ccdB; toxin CcdB
D VK055_3656 doc; death on curing protein K07341 doc; death on curing protein
D VK055_3655 prevent-host-death family protein K19165 phd; antitoxin Phd
D VK055_2011 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D VK055_2010 helix-turn-helix family protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D VK055_4672 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D VK055_5108 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D VK055_5109 antidote-toxin recognition MazE family protein K18829 mvpT; antitoxin VapB
D VK055_2806 yjgK; toxin-antitoxin biofilm protein K19334 tabA; biofilm protein TabA
D VK055_1695 hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A
D VK055_1394 bssS family protein K12148 bssS; biofilm regulator BssS
D VK055_1659 biofilm formation family protein K19688 bssR; biofilm regulator BssR
D VK055_1354 ycfR; protein involved in stress resistance and biofilm formation K12151 bhsA; multiple stress resistance protein BhsA
D VK055_2472 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VK055_3818 mreB; mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VK055_4037 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VK055_4030 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VK055_4762 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VK055_4158 hypothetical protein K19168 cptA; toxin CptA
D VK055_4157 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB
D VK055_4639 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:kpt01504]
D VK055_0891 bla; beta-lactamase SHV-24 K18699 blaSHV; beta-lactamase class A SHV [EC:3.5.2.6]
D VK055_1652 sugar (and other) transporter family protein K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D VK055_0457 chloramphenicol acetyltransferase family protein K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D VK055_0607 major Facilitator Superfamily protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_2682 fosA; glutathione transferase fosA K21265 fosA5; glutathione S-transferase fosA5 [EC:2.5.1.18]
D VK055_2703 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VK055_2704 copR; transcriptional activator protein CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VK055_1327 HAMP domain protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D VK055_1326 transcriptional regulatory, C terminal family protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D VK055_5004 transcriptional regulatory, C terminal family protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D VK055_3427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_2105 acrA; acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VK055_3426 acrB3; acrB RND-type permease K18138 acrB; multidrug efflux pump
D VK055_2106 acrB; acrB RND-type permease K18138 acrB; multidrug efflux pump
D VK055_1978 bepE; efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VK055_3425 putative efflux pump outer membrane protein ttgC K18139 oprM; outer membrane protein, multidrug efflux system
D VK055_1024 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D VK055_0316 bacterial regulatory, tetR family protein K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D VK055_2082 cueR; cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VK055_3804 putative transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D VK055_3803 acrA2; acrA Membrane Fusion Protein K18141 acrE; membrane fusion protein, multidrug efflux system
D VK055_3802 acrB2; acrB RND-type permease K18142 acrF; multidrug efflux pump
D VK055_4025 tolC; tolC outer membrane channel K12340 tolC; outer membrane protein
D VK055_3990 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4175 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4178 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4202 bacterial regulatory, luxR family protein K07690 evgA; two-component system, NarL family, response regulator EvgA
D VK055_4555 bacterial regulatory helix-turn-helix, lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VK055_1081 bacterial regulatory helix-turn-helix, lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VK055_1276 bacterial regulatory helix-turn-helix, lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D VK055_1151 major Facilitator Superfamily protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D VK055_0871 marA; bacterial regulatory helix-turn-helix, AraC family protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D VK055_1527 ompC3; outer membrane protein C K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:kpt00537]
D VK055_2229 phoA; alkaline phosphatase H K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VK055_0149 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D VK055_3601 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D VK055_0680 dipeptidase AC. Metallo peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:kpt03100]
D VK055_2349 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_3217 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_3127 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_4765 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_4766 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VK055_4784 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_2062 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_3178 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_4490 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_4491 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_4493 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_4492 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VK055_5128 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VK055_5138 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VK055_5131 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VK055_5143 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VK055_2335 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VK055_2346 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VK055_3214 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VK055_0036 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VK055_1842 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VK055_1843 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VK055_1839 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VK055_1840 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VK055_2698 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VK055_3084 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VK055_3310 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VK055_4587 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VK055_0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_2902 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_2901 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_2903 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_3119 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_4171 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VK055_3177 tRNA-His K14226 tRNA-His; tRNA His
D VK055_2350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VK055_3128 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VK055_3218 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VK055_2766 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_2605 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_2607 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_2606 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_3176 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_3893 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_1838 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VK055_1773 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1775 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1779 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1777 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_4758 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1774 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VK055_1837 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_1841 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_3993 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_3899 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_4346 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_4345 tRNA-Met K14230 tRNA-Met; tRNA Met
D VK055_2941 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VK055_4076 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VK055_4895 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VK055_3567 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VK055_3175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VK055_1412 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_1416 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_1484 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_5145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_4489 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VK055_3118 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VK055_3798 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VK055_2282 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VK055_3121 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VK055_3213 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VK055_0244 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VK055_0245 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VK055_3120 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VK055_0471 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_1776 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_4761 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_4760 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_4759 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_1778 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_0473 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_0472 tRNA-Val K14237 tRNA-Val; tRNA Val
D VK055_3447 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D VK055_2351 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3311 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3219 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3129 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_4586 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_2699 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_3085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VK055_4588 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3216 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_2348 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3796 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_2697 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3309 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VK055_3797 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_4589 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3215 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3308 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_2347 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3082 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_2696 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VK055_3799 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D VK055_4042 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D VK055_0403 oxidoreductase, aldo/keto reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D VK055_2345 4-nitrobenzaldehyde reductase (multifunctional) K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D VK055_0860 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D VK055_1342 pdxA3; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D VK055_0893 ygbJ; 3-hydroxyisobutyrate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D VK055_1915 iron-containing alcohol dehydrogenase family protein K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D VK055_4771 putative oxidoreductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D VK055_2293 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D VK055_2294 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D VK055_1658 yliI; aldose sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D VK055_2015 anaerobic sulfatase maturase K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7]
D VK055_2183 putative oxidoreductase, NAD(P)-binding putativeNAD(P)H-dependent xylose reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D VK055_4209 putative oxidoreductase, NAD(P)-binding putativeNAD(P)H-dependent xylose reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D VK055_3958 NADH:flavin oxidoreductase / NADH oxidase familyprotein K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D VK055_0568 zinc-binding dehydrogenase family protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D VK055_0678 pqqC; coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D VK055_1395 soxA; monomeric sarcosine oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D VK055_3033 qor; qor K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D VK055_1250 NAD(P)H quinone oxidoreductase, PIG3 family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D VK055_4032 flavodoxin-like fold family protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D VK055_1027 NADH-azoreductase, FMN-dependent K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D VK055_4525 NADH-azoreductase, FMN-dependent K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D VK055_1882 ahpF; alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D VK055_2849 msrA; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VK055_1262 msrB; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D VK055_4055 glutathione S-transferase, C-terminal domain protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D VK055_4823 disulfide bond reductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D VK055_3938 glutathione S-transferase, C-terminal domain protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D VK055_3815 yedY; sulfoxide reductase catalytic subunit yedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D VK055_0524 prokaryotic cytochrome b561 family protein K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D VK055_1309 manganese containing catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D VK055_5070 cpo; non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D VK055_4697 bcp; thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VK055_1140 putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VK055_1883 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D VK055_0653 peroxiredoxin, OsmC subfamily protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D VK055_4737 yfeX; putative porphyrinogen oxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D VK055_3667 yhhW; pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VK055_1414 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VK055_0348 cysteine dioxygenase type I K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D VK055_1208 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D VK055_4624 oxidoreductase NAD-binding domain protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D VK055_1464 putative 2Fe-2S cluster-containing protein K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D VK055_1466 2Fe-2S iron-sulfur cluster binding domain protein K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239]
D VK055_4367 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D VK055_3969 siderophore-interacting FAD-binding domain protein K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9]
D VK055_0042 putative ferritin-1 K02217 ftnA; ferritin [EC:1.16.3.2]
D VK055_2438 multicopper oxidase with role in copper homeostasis K14588 cueO; cuproxidase [EC:1.16.3.4]
D VK055_3466 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D VK055_4469 pyridine nucleotide-disulfide oxidoreductase family protein K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
D VK055_4217 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D VK055_4693 arsC2; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D VK055_0676 pqqE; coenzyme PQQ biosynthesis enzyme PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D VK055_2819 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D VK055_1554 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VK055_1669 glycyl-radical enzyme activating family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VK055_1471 glycyl-radical enzyme activating family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VK055_1581 2Fe-2S iron-sulfur cluster binding domain protein K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D VK055_4411 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D VK055_0478 cfa; cfa K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D VK055_2716 mycolic acid cyclopropane synthetase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D VK055_0843 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D VK055_0538 tehB2; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D VK055_1405 acyltransferase family protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D VK055_0947 mdcH; malonate decarboxylase, epsilon subunit K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D VK055_2110 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VK055_0599 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D VK055_1849 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D VK055_3916 acetyltransferase family protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D VK055_3560 acetyltransferase family protein K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D VK055_3081 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D VK055_2797 acetyltransferase family protein K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D VK055_0856 putative acyl-CoA N-acyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D VK055_2318 acetyltransferase family protein K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D VK055_0566 putative acyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D VK055_1569 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D VK055_5103 iroB; Putative UDP-glucoronosyl and UDP-glucosyl transferase K23725 iroB; enterobactin C-glucosyltransferase [EC:2.4.1.369]
D VK055_0940 mdcB; triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D VK055_4595 DTW domain protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VK055_4288 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D VK055_4310 cob(I)alamin adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D VK055_4687 bglK; beta-glucoside kinase K18673 bglK; beta-glucoside kinase [EC:2.7.1.85]
D VK055_0952 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VK055_4886 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VK055_0894 putative tRNA synthase K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D VK055_2804 pfkB carbohydrate kinase family protein K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D VK055_1341 sorbitol phosphotransferase enzyme II family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D VK055_0861 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D VK055_0295 ydiA; putative phosphotransferase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D VK055_4016 glnD PII-uridylyltransferase family protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D VK055_4074 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VK055_1290 diguanylate cyclase domain protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D VK055_2690 diguanylate cyclase domain protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D VK055_0945 mdcG; malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D VK055_0292 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D VK055_2624 sulfatase family protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D VK055_3077 aceK; aceK K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D VK055_1407 regulator of RNase III activity K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D VK055_0807 esterase family protein K23721 iroE; apo-salmochelin esterase [EC:3.1.1.107]
D VK055_1933 fes; enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D VK055_5101 iroD; esterase family protein K23723 iroD; iron(III)-salmochelin esterase [EC:3.1.1.109]
D VK055_0532 alpha/beta hydrolase fold family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D VK055_0096 pphA; phosphatase 1 modulates phospho, signals proteinmisfolding K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D VK055_1671 HAD hydrolase, IIB family protein K07757 ybiV; sugar-phosphatase [EC:3.1.3.23]
D VK055_1192 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D VK055_4791 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D VK055_1481 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VK055_4912 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VK055_3006 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VK055_2127 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VK055_4207 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VK055_4767 EAL domain protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VK055_4682 yfgF; cyclic di-GMP phosphodiesterase YfgF K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VK055_3590 putative zinc-dependent peptidase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VK055_4973 bds1; bacterially-derived sulfatase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D VK055_4971 bds; bacterially-derived sulfatase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D VK055_4101 extracellular deoxyribonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D VK055_1367 putative metallodependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VK055_2596 putative DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VK055_3140 magnesium-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VK055_1822 ybfF; esterase ybfF K01175 ybfF; esterase [EC:3.1.-.-]
D VK055_2315 alpha/beta hydrolase family protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D VK055_3588 endo-1,4-D-glucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D VK055_3580 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D VK055_2120 ganB; arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D VK055_0058 glycosyl Hydrolase Family 88 family protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D VK055_3449 &alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D VK055_2644 dan; D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D VK055_3786 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VK055_1222 ydjC-like family protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D VK055_1874 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D VK055_4154 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D VK055_2809 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VK055_3058 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VK055_0426 endoribonuclease L-PSP family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VK055_4015 CYTH domain protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D VK055_2144 cof; HMP-PP phosphatase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D VK055_4858 NUDIX domain protein K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-]
D VK055_4710 nudix-type nucleoside diphosphatase, YffH/AdpP family protein K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D VK055_1380 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D VK055_3322 AAA domain family protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VK055_0942 mdcD; malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D VK055_0943 mdcE; malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D VK055_0895 class II Aldolase and Adducin N-terminal domain protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D VK055_3622 pdc; P-coumaric acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D VK055_3234 fsa; fructose-6-phosphate aldolase K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-]
D VK055_2899 putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D VK055_1524 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D VK055_4350 csdA; cysteine desulfurase, catalytic subunit CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D VK055_4356 fucU; L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D VK055_3272 rhaU; L-rhamnose 1-epimerase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D VK055_4472 gutQ; D-arabinose 5-phosphate isomerase K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D VK055_1343 tpiA; triose-phosphate isomerase K21910 eryH; L-erythrulose 1-phosphate isomerase [EC:5.3.1.33]
D VK055_0896 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D VK055_2838 mpl; L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D VK055_0511 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D VK055_0512 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D VK055_0513 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D VK055_2327 nqrA; ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D VK055_2326 nqrB; ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D VK055_2325 nqrC; ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D VK055_2324 nqrD; ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D VK055_2323 nqrE; ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D VK055_2322 nqrF; ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D VK055_3635 cadA2; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D VK055_2810 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D VK055_2422 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D VK055_2776 xylose isomerase-like TIM barrel family protein K06605 iolH; myo-inositol catabolism protein IolH
D VK055_2627 SIS domain protein K19504 gfrE; glucoselysine-6-phosphate deglycase
D VK055_2626 putative glucosamine-fructose-6-phosphate aminotransferase K19510 gfrF; fructoselysine-6-phosphate deglycase
D VK055_4317 dhaB2; glycerol dehydratase large subunit K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D VK055_4316 ddrB; diol dehydratase-reactivating factor small subunit K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D VK055_3280 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D VK055_4644 fdx; ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D VK055_4871 2Fe-2S iron-sulfur cluster binding domain protein K11107 yfaE; ferredoxin
D VK055_0510 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D VK055_0509 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D VK055_0514 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D VK055_3532 putative electron transport protein HydN K05796 hydN; electron transport protein HydN
D VK055_4466 putative electron transport protein HydN K05796 hydN; electron transport protein HydN
D VK055_3326 flavodoxin family protein K06205 mioC; MioC protein
D VK055_4159 flavodoxin K03840 fldB; flavodoxin II
D VK055_4640 scaffold protein involved in iron-sulfur cluster assembly K04488 iscU; nitrogen fixation protein NifU and related proteins
D VK055_2833 cybC; cytochrome b K15536 cybC; soluble cytochrome b562
D VK055_4453 putative electron transport protein HydN K15827 hycB; formate hydrogenlyase subunit 2
D VK055_4454 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein K15828 hycC; formate hydrogenlyase subunit 3
D VK055_4455 NADH dehydrogenase family protein K15829 hycD; formate hydrogenlyase subunit 4
D VK055_4456 hyfG; hydrogenase 4, large subunit K15830 hycE; formate hydrogenlyase subunit 5
D VK055_4457 4Fe-4S binding domain protein K15831 hycF; formate hydrogenlyase subunit 6
D VK055_4458 hydrogenase 3 and formate hydrogenlyase complex,HycG subunit K15832 hycG; formate hydrogenlyase subunit 7
D VK055_4470 metallo-beta-lactamase superfamily protein K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D VK055_1824 flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
D VK055_2882 aidB K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D VK055_4512 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D VK055_4751 etoposide-induced 2.4 family protein K06203 cysZ; CysZ protein
D VK055_4725 ethanolamine utilization, EutH family protein K04023 eutH; ethanolamine transporter
D VK055_4723 eutJ; ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D VK055_4730 putative structural protein, ethanolamine utilization microcompartment K04025 eutK; ethanolamine utilization protein EutK
D VK055_4729 putative carboxysome structural protein with predicted role in ethanolamine utilization K04026 eutL; ethanolamine utilization protein EutL
D VK055_4721 ccmL2; carbon dioxide concentrating mechanism protein CcmL K04028 eutN; ethanolamine utilization protein EutN
D VK055_4304 eutP; ethanolamine utilization protein, EutP K04029 eutP; ethanolamine utilization protein EutP
D VK055_4716 eutP2; ethanolamine utilization protein, EutP K04029 eutP; ethanolamine utilization protein EutP
D VK055_4717 cupin domain protein K04030 eutQ; ethanolamine utilization protein EutQ
D VK055_4305 BMC domain protein K04031 eutS; ethanolamine utilization protein EutS
D VK055_4715 BMC domain protein K04031 eutS; ethanolamine utilization protein EutS
D VK055_2365 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K08234 yaeR; glyoxylase I family protein
D VK055_1139 ycjI; murein peptide amidase A K14054 mpaA; murein peptide amidase A
D VK055_4093 alanine racemase, N-terminal domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D VK055_1176 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D VK055_1175 TPR repeat family protein K19804 lapB; lipopolysaccharide assembly protein B
D VK055_1715 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D VK055_3587 bacterial cellulose synthase subunit K20541 bcsB; cellulose synthase operon protein B
D VK055_3577 bacterial cellulose synthase subunit K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D VK055_3174 tetratricopeptide repeat family protein K02498 hemY; HemY protein
D VK055_3145 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D VK055_3146 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D VK055_4019 membrane fusogenic activity family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D VK055_3914 putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D VK055_3307 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D VK055_0971 ydaH; abgT transporter family protein K12942 abgT; aminobenzoyl-glutamate transport protein
D VK055_4307 rnfC Barrel sandwich hybrid domain protein K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
D VK055_4039 sufI; cell division protein K04753 sufI; suppressor of ftsI
D VK055_3352 yieF; chromate reductase monomer K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D VK055_1582 doxX family protein K15977 K15977; putative oxidoreductase
D VK055_3939 doxX family protein K15977 K15977; putative oxidoreductase
D VK055_4626 SURF4 family protein K15977 K15977; putative oxidoreductase
D VK055_4704 phospholipase/Carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
D VK055_4594 acetyltransferase family protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D VK055_4475 glucitol operon activator family protein K02466 gutM; glucitol operon activator protein
D VK055_3829 barstar family protein K03623 yhcO; ribonuclease inhibitor
D VK055_1876 cspE; transcription antiterminator and regulator of RNA stability K03704 cspA; cold shock protein
D VK055_1573 cspD; cold shock domain protein CspD K03704 cspA; cold shock protein
D VK055_3550 cspA; cspA transcriptional activator K03704 cspA; cold shock protein
D VK055_0110 cspC; stress, member of the CspA stress protein, member of the CspA family predicted DNA-binding transcriptional regulator K03704 cspA; cold shock protein
D VK055_3097 regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ family protein K07740 rsd; regulator of sigma D
D VK055_4452 transcriptional repressor of hyc and hyp operonsfamily protein K15833 hycA; formate hydrogenlyase regulatory protein HycA
D VK055_4459 formate hydrogenlyase maturation HycH family protein K15834 hycH; formate hydrogenlyase maturation protein HycH
D VK055_2139 glnK; GlnK K04752 glnK; nitrogen regulatory protein P-II 2
D VK055_3694 putative transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D VK055_2692 ccmA9; heme ABC exporter, ATP-binding protein CcmA K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D VK055_1053 hslJ; heat shock protein hslJ K03668 hslJ; heat shock protein HslJ
D VK055_1572 clpS; specificity factor for ClpA-ClpP chaperone-protease complex K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D VK055_2155 tig; trigger factor K03545 tig; trigger factor
D VK055_3814 yedZ; conserved inner membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D VK055_3285 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D VK055_4002 ureE; urease accessory protein ureE K03187 ureE; urease accessory protein
D VK055_4193 ureE urease accessory, N-terminal domain protein K03187 ureE; urease accessory protein
D VK055_4001 ureF; urease accessory protein ureF K03188 ureF; urease accessory protein
D VK055_4192 ureF family protein K03188 ureF; urease accessory protein
D VK055_4000 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D VK055_4191 ureG2; urease accessory protein UreG K03189 ureG; urease accessory protein
D VK055_4006 ureD; urease accessory protein ureD K03190 ureD; urease accessory protein
D VK055_4190 ureD urease accessory family protein K03190 ureD; urease accessory protein
D VK055_4557 smpB; ssrA-binding protein K03664 smpB; SsrA-binding protein
D VK055_4449 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D VK055_4448 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D VK055_4447 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D VK055_4467 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D VK055_4513 glutaredoxin family protein K06191 nrdH; glutaredoxin-like protein NrdH
D VK055_3210 comM; competence protein ComM K07391 comM; magnesium chelatase family protein
D VK055_0153 proteasome subunit K07395 K07395; putative proteasome-type protease
D VK055_3732 osmC-like family protein K07397 yhfA; putative redox protein
D VK055_3687 gntY; iron-sulfur cluster scaffold protein K07400 nfuA; Fe/S biogenesis protein NfuA
D VK055_4428 hypothetical protein K07401 K07401; selenoprotein W-related protein
D VK055_0587 glutathione S-transferase, N-terminal domain protein K11208 yncG; GST-like protein
C 99976 Replication and repair
D VK055_2135 ybaZ; DNA base-flipping protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D VK055_4362 5'-3' exonuclease, C-terminal SAM fold family protein K01146 xni; protein Xni
D VK055_3491 DNA repair RadC family protein K03630 radC; DNA repair protein RadC
D VK055_3148 yigN; recombination limiting protein K09760 rmuC; DNA recombination protein RmuC
D VK055_1576 AAA domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D VK055_3923 hypothetical protein K07460 yraN; putative endonuclease
D VK055_3915 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease
D VK055_3787 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D VK055_4237 phage integrase family protein K07357 fimB; type 1 fimbriae regulatory protein FimB
D VK055_4235 phage integrase family protein K07358 fimE; type 1 fimbriae regulatory protein FimE
D VK055_5053 gyrI-like small molecule binding domain protein K07470 sbmC; DNA gyrase inhibitor
D VK055_1561 ycaJ; recombination factor K07478 ycaJ; putative ATPase
D VK055_3789 ogr/Delta-like zinc finger family protein K07479 yrdD; putative DNA topoisomerase
D VK055_0441 transposase family protein K07483 K07483; transposase
D VK055_0732 transposase family protein K07483 K07483; transposase
D VK055_1909 transposase family protein K07483 K07483; transposase
D VK055_1988 transposase family protein K07483 K07483; transposase
D VK055_2273 transposase family protein K07483 K07483; transposase
D VK055_2786 transposase family protein K07483 K07483; transposase
D VK055_4146 transposase family protein K07483 K07483; transposase
D VK055_2726 transposase, Mutator family protein K07493 K07493; putative transposase
D VK055_2731 transposase family protein K07497 K07497; putative transposase
D VK055_2785 putative transposase K07497 K07497; putative transposase
D VK055_0733 putative transposase K07497 K07497; putative transposase
D VK055_1989 putative transposase K07497 K07497; putative transposase
D VK055_2272 putative transposase K07497 K07497; putative transposase
D VK055_2729 integrase core domain protein K07497 K07497; putative transposase
D VK055_0442 integrase core domain protein K07497 K07497; putative transposase
D VK055_1910 putative transposase K07497 K07497; putative transposase
D VK055_4147 putative transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D VK055_1150 pspA; phage shock protein A K03969 pspA; phage shock protein A
D VK055_1147 pspD; peripheral inner membrane phage-shock protein K03971 pspD; phage shock protein D
D VK055_2096 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D VK055_4785 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein
D VK055_4050 gph7; sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D VK055_3448 gph5; sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D VK055_2723 gph3; sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D VK055_2456 gph2; sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D VK055_1011 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D VK055_3179 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D VK055_1463 transporter, betaine/carnitine/choline transporter family protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VK055_0505 tppB; tppB peptide POT Transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VK055_1812 dtpD; dipeptide permease D K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VK055_4218 H+ symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VK055_2050 yjdL peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VK055_3609 yhiP peptide POT transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VK055_2642 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D VK055_2567 agcS; amino acid carrier family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VK055_2213 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D VK055_3063 sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D VK055_1162 permease for cytosine/purines, uracil, thiamine,allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D VK055_0698 permease for cytosine/purines, uracil, thiamine,allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D VK055_2595 nucleoside transporter, NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VK055_1431 na+ dependent nucleoside transporter family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VK055_1611 aspT/YidE/YbjL antiporter duplication domain protein K07085 K07085; putative transport protein
D VK055_3378 aspT/YidE/YbjL antiporter duplication domain protein K07085 K07085; putative transport protein
D VK055_4966 hypothetical protein K23243 rcnB; nickel/cobalt homeostasis protein
C 99978 Cell growth
D VK055_1212 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D VK055_3631 putative periplasmic protein K27311 dcrB; inner membrane lipoprotein DcrB
D VK055_2862 ric; iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D VK055_1220 cedA; cell division modulator K15722 cedA; cell division activator
D VK055_3513 yibP; envC murein hydrolase K22719 envC; murein hydrolase activator
C 99993 Cell motility
D VK055_1363 hypothetical protein K07337 K07337; penicillin-binding protein activator
D VK055_1498 sxy; transcriptional coactivator for CRP K07343 tfoX; DNA transformation protein and related proteins
D VK055_4243 gram-negative pili assembly chaperone, C-terminal domain protein K15540 ecpD; chaperone protein EcpD
D VK055_4378 syd; secY-interacting protein K15723 syd; SecY interacting protein Syd
D VK055_4018 glycogen synthesis family protein K22720 glgS; surface composition regulator
C 99995 Signaling proteins
D VK055_2458 putative signaling modulator of AmpE K03807 ampE; AmpE protein
D VK055_0102 putative structural transport element K03607 proQ; ProP effector
D VK055_3610 uspA; response regulator K06149 uspA; universal stress protein A
D VK055_0056 universal stress protein K14064 uspC; universal stress protein C
D VK055_0975 ydaA; universal stress protein with a role in resistance to UV irradiation K14055 uspE; universal stress protein E
D VK055_1060 hypothetical protein K14061 uspF; universal stress protein F
D VK055_1742 universal stress protein UP12 K11932 uspG; universal stress protein G
D VK055_1881 universal stress protein UP12 K11932 uspG; universal stress protein G
D VK055_0912 universal stress protein UP12 K11932 uspG; universal stress protein G
D VK055_1920 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D VK055_3293 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D VK055_5059 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D VK055_1846 hypothetical protein with nucleoside triphosphate hydrolase domain K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D VK055_1427 AAA domain protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D VK055_1267 yeaG; protein kinase K07180 prkA; serine protein kinase
D VK055_4013 bacterial SH3 domain protein K07184 ygiM; SH3 domain protein
D VK055_2589 bacterial virulence factor hemolysin family protein K07186 smp; membrane protein
D VK055_0872 marB; marB family protein K13630 marB; multiple antibiotic resistance protein MarB
D VK055_2175 yajQ; nucleotide binding protein K09767 yajQ; cyclic-di-GMP-binding protein
D VK055_1087 putative oxidoreductase with NAD(P)-binding Rossmann-fold domain K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein
D VK055_0900 ycgF; blue light-responsive regulator of YcgE K21973 bluF; blue light- and temperature-responsive anti-repressor
D VK055_1751 ycgF2; blue light-responsive regulator of YcgE K21973 bluF; blue light- and temperature-responsive anti-repressor
D VK055_1752 hypothetical protein K21974 ycgZ; probable RcsB/C two-component-system connector
D VK055_1753 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector
D VK055_1754 ymgB; regulator of acid resistance, influenced by indole K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance
C 99992 Structural proteins
D VK055_1562 lolA; outer membrane lipocarrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D VK055_0214 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D VK055_4786 mlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D VK055_3190 chain length determinant family protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D VK055_0498 pcp; outer membrane lipoprotein pcp K06077 slyB; outer membrane lipoprotein SlyB
D VK055_2374 hlpA; periplasmic chaperone K06142 hlpA; outer membrane protein
D VK055_4412 nlpD; nlpD putative outer membrane lipoprotein K06194 nlpD; lipoprotein NlpD
D VK055_4170 putative lipoprotein; predicted DNA-binding transcriptional regulator K12943 ygeR; lipoprotein YgeR
D VK055_3908 TPR repeat family protein K05803 nlpI; lipoprotein NlpI
D VK055_1209 yciD; ompW, outer membrane protein K07275 ompW; outer membrane protein
D VK055_0274 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D VK055_0127 outer membrane lipo, Slp family protein K07285 slp; outer membrane lipoprotein
D VK055_2158 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D VK055_5010 asmA family protein K07289 asmA; AsmA protein
D VK055_3595 asmA family protein K07290 yhjG; AsmA family protein
D VK055_2083 nfeD-like C-terminal, partner-binding family protein K07340 ybbJ; inner membrane protein
D VK055_2691 efflux transporter, RND family, MFP subunit K01993 ABC-2.TX; HlyD family secretion protein
D VK055_3482 hlyD secretion family protein K01993 ABC-2.TX; HlyD family secretion protein
D VK055_0938 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
D VK055_1172 glycine zipper 2TM domain protein K04062 osmB; osmotically inducible lipoprotein OsmB
D VK055_1229 smpA / OmlA family protein K04064 osmE; osmotically inducible lipoprotein OsmE
D VK055_2576 inner membrane CreD family protein K06143 creD; inner membrane protein
D VK055_0397 ccmE; ccmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D VK055_0400 ccmH; cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D VK055_4654 putative membrane protein K15539 rodZ; cytoskeleton protein RodZ
D VK055_3826 hypothetical protein K21695 aaeX; protein AaeX
D VK055_4199 hypothetical protein K21908 hdeD; membrane protein HdeD
D VK055_3987 hypothetical protein K21908 hdeD; membrane protein HdeD
D VK055_4321 BMC domain protein K27263 pduB; bacterial microcompartment shell protein
D VK055_4315 BMC domain protein K27266 pduJ; bacterial microcompartment shell protein
D VK055_4314 BMC domain protein K27267 pduK; bacterial microcompartment shell protein
D VK055_4312 putative propanediol utilization protein K27268 pduM; bacterial microcompartment assembly protein
D VK055_4311 ccmL; carbon dioxide concentrating mechanism protein CcmL K27269 pduN; bacterial microcompartment shell vertex protein
D VK055_4306 BMC domain protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D VK055_3346 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D VK055_0049 ferritin-like domain protein K02255 ftnB; ferritin-like protein 2
D VK055_3751 BFD-like [2Fe-2S] binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D VK055_1404 periplasmic glucan biosynthesis, MdoG family protein K03670 mdoG; periplasmic glucans biosynthesis protein
D VK055_2937 cutA; copper binding protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D VK055_0061 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D VK055_2971 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D VK055_2527 apaG; protein ApaG K06195 apaG; ApaG protein
D VK055_3169 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D VK055_4426 putative heme/hemoglobin transport protein K07225 hmuS; putative hemin transport protein
D VK055_0226 dsrE/DsrF-like family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D VK055_4810 colicin V production family protein K03558 cvpA; membrane protein required for colicin V production
D VK055_5165 chitinase class I family protein K03791 K03791; putative chitinase
D VK055_3535 mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein K03796 bax; Bax protein
D VK055_1507 mce related family protein K06192 pqiB; paraquat-inducible protein B
D VK055_1386 oxidoreductase, NAD-binding Rossmann fold family protein K03810 mviM; virulence factor
D VK055_4851 hypothetical protein K02348 elaA; ElaA protein
D VK055_4592 hypothetical protein K05811 yfiM; putative lipoprotein
D VK055_0222 chaB family protein K06197 chaB; cation transport regulator
D VK055_1029 paaY; phenylacetic acid degradation protein PaaY K02617 paaY; phenylacetic acid degradation protein
D VK055_2599 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein
D VK055_1410 putative hydrolase ycdX K04477 ycdX; putative hydrolase
D VK055_0679 pqqB; coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D VK055_0677 pqqD; coenzyme PQQ biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D VK055_4599 yfiD; stress-induced alternate pyruvate formate-lyase subunit K06866 grcA; autonomous glycyl radical cofactor
D VK055_0248 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D VK055_2394 essential respiratory protein A K15724 erpA; iron-sulfur cluster insertion protein
D VK055_0319 sufA; feS assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA
D VK055_0320 sufB; feS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D VK055_0322 sufD; feS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D VK055_1218 hypothetical protein K07038 K07038; inner membrane protein
D VK055_0763 resiniferatoxin-binding, phosphotriesterase-related protein K07048 PTER; phosphotriesterase-related protein
D VK055_3291 yihY; yihY family inner membrane domain protein K07058 K07058; membrane protein
D VK055_3597 yhjD; inner membrane protein YhjD K07058 K07058; membrane protein
D VK055_2934 fxsA cytoplasmic membrane family protein K07113 fxsA; UPF0716 protein FxsA
D VK055_0324 sufE; cysteine desulfuration protein sufE K02426 sufE; cysteine desulfuration protein SufE
D VK055_4349 csdE; cysteine desulfurase, sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE
D VK055_1396 rhodanese-like domain protein K07146 K07146; UPF0176 protein
D VK055_1322 hflD; lysogenization regulator K07153 hflD; high frequency lysogenization protein
D VK055_2965 hypothetical protein K04750 phnB; PhnB protein
D VK055_1402 msyB family protein K12147 msyB; acidic protein MsyB
D VK055_2611 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF
D VK055_4383 gudD; glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein
D VK055_3741 slyX family protein K03745 slyX; SlyX protein
D VK055_3788 hypothetical protein K03747 smg; Smg protein
D VK055_2579 creA family protein K05805 creA; CreA protein
D VK055_4102 peptidase MA superfamily protein K02742 sprT; SprT protein
D VK055_4809 cell division protein DedD K03749 dedD; DedD protein
D VK055_3711 damX; cell division protein DamX K03112 damX; DamX protein
D VK055_4938 hypothetical protein K03748 sanA; SanA protein
D VK055_4806 hypothetical protein K03975 dedA; membrane-associated protein
D VK055_0100 yebS; conserved inner membrane protein K03808 pqiA; paraquat-inducible protein A
D VK055_1508 integral membrane, PqiA family protein K03808 pqiA; paraquat-inducible protein A
D VK055_3381 hypothetical protein K00389 yidH; putative membrane protein
D VK055_1001 hypothetical protein K08987 K08987; putative membrane protein
D VK055_1145 hypothetical protein K08990 ycjF; putative membrane protein
D VK055_3638 hypothetical protein K08993 yhhL; putative membrane protein
D VK055_0247 hypothetical protein K09858 K09858; SEC-C motif domain protein
D VK055_2136 putative outer membrane lipoprotein K09914 K09914; putative lipoprotein
D VK055_3047 maltose operon periplasmic family protein K05775 malM; maltose operon periplasmic protein
D VK055_3054 phosphate-starvation-inducible E family protein K13256 psiE; protein PsiE
D VK055_2222 aroM family protein K14591 aroM; protein AroM
D VK055_2964 phnA family protein K06193 phnA; protein PhnA
C 99997 Function unknown
D VK055_3383 putative dNA-binding transcriptional regulator K06871 K06871; uncharacterized protein
D VK055_4678 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D VK055_0643 hypothetical protein K06884 K06884; uncharacterized protein
D VK055_1312 hypothetical protein K06884 K06884; uncharacterized protein
D VK055_1109 HD domain protein K06885 K06885; uncharacterized protein
D VK055_2879 yjfP; esterase K06889 K06889; uncharacterized protein
D VK055_1127 hypothetical protein K06889 K06889; uncharacterized protein
D VK055_1716 inhibitor of apoptosis-promoting Bax1 family protein K06890 K06890; uncharacterized protein
D VK055_1146 hypothetical protein K06918 K06918; uncharacterized protein
D VK055_1493 hypothetical protein K06929 K06929; uncharacterized protein
D VK055_0490 hypothetical protein K06938 K06938; uncharacterized protein
D VK055_1210 flagellin N-methylase family protein K06940 K06940; uncharacterized protein
D VK055_0015 HD domain protein K06950 K06950; uncharacterized protein
D VK055_2714 flavin containing amine oxidoreductase family protein K06954 K06954; uncharacterized protein
D VK055_1219 sodium:dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D VK055_4225 hypothetical protein K06975 K06975; uncharacterized protein
D VK055_2007 cupin domain protein K06995 K06995; uncharacterized protein
D VK055_2193 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K06996 K06996; uncharacterized protein
D VK055_1360 hypothetical protein K07000 K07000; uncharacterized protein
D VK055_4029 hypothetical protein K07000 K07000; uncharacterized protein
D VK055_3433 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D VK055_4896 type I phosphodiesterase / nucleotide pyrophosphatase family protein K07014 K07014; uncharacterized protein
D VK055_3735 alpha/beta hydrolase fold family protein K07019 K07019; uncharacterized protein
D VK055_2563 GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein
D VK055_0039 yecA family protein K07039 K07039; uncharacterized protein
D VK055_4702 neutral zinc metallopeptidase family protein K07054 K07054; uncharacterized protein
D VK055_3739 hypothetical protein K07070 K07070; uncharacterized protein
D VK055_4820 NAD dependent epimerase/dehydratase family protein K07071 K07071; uncharacterized protein
D VK055_3920 putative permease family protein K07089 K07089; uncharacterized protein
D VK055_0703 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D VK055_0797 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D VK055_4796 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D VK055_4825 phosphodiesterase, MJ0936 family protein K07095 K07095; uncharacterized protein
D VK055_2856 hypothetical protein K07109 K07109; uncharacterized protein
D VK055_1002 putative inner membrane protein K07112 K07112; uncharacterized protein
D VK055_1141 membrane AbrB duplication domain protein K07120 K07120; uncharacterized protein
D VK055_3924 putative glycosylase K07121 K07121; uncharacterized protein
D VK055_1452 short chain dehydrogenase family protein K07124 K07124; uncharacterized protein
D VK055_0188 sel1 repeat family protein K07126 K07126; uncharacterized protein
D VK055_0189 sel1 repeat family protein K07126 K07126; uncharacterized protein
D VK055_0191 sel1 repeat family protein K07126 K07126; uncharacterized protein
D VK055_0194 sel1 repeat family protein K07126 K07126; uncharacterized protein
D VK055_2987 sel1 repeat family protein K07126 K07126; uncharacterized protein
D VK055_4182 sel1 repeat family protein K07126 K07126; uncharacterized protein
D VK055_1419 sel1 repeat family protein K07126 K07126; uncharacterized protein
D VK055_0192 sel1 repeat family protein K07126 K07126; uncharacterized protein
D VK055_0193 putative sel1-like repeat; harboring protein K07126 K07126; uncharacterized protein
D VK055_0064 MAPEG family protein K07136 K07136; uncharacterized protein
D VK055_3854 radical SAM superfamily protein K07139 K07139; uncharacterized protein
D VK055_1512 putative 2Fe-2S cluster-containing protein K07140 K07140; MOSC domain-containing protein
D VK055_4933 hypothetical protein K07148 K07148; uncharacterized protein
D VK055_4077 hypothetical protein K07150 K07150; uncharacterized protein
D VK055_3198 hypothetical protein K07150 K07150; uncharacterized protein
D VK055_4166 hypothetical protein K07150 K07150; uncharacterized protein
D VK055_4091 hypothetical protein K09131 K09131; uncharacterized protein
D VK055_1869 hypothetical protein K09158 K09158; uncharacterized protein
D VK055_0135 flagellin N-methylase family protein K09160 K09160; uncharacterized protein
D VK055_4830 yfbU domain protein K09161 K09161; uncharacterized protein
D VK055_2715 hypothetical protein K09701 K09701; uncharacterized protein
D VK055_4213 hypothetical protein K09702 K09702; uncharacterized protein
D VK055_1288 hypothetical protein K09712 K09712; uncharacterized protein
D VK055_2225 hypothetical protein K09768 K09768; uncharacterized protein
D VK055_0269 YCII-related domain protein K09780 K09780; uncharacterized protein
D VK055_0019 yedI; conserved inner membrane protein K09781 K09781; uncharacterized protein
D VK055_1268 hypothetical protein K09786 K09786; uncharacterized protein
D VK055_2099 hypothetical protein K09790 K09790; uncharacterized protein
D VK055_1540 hypothetical protein K09791 K09791; uncharacterized protein
D VK055_3512 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D VK055_4559 rnfH Ubiquitin family protein K09801 K09801; uncharacterized protein
D VK055_5055 hypothetical protein K09802 K09802; uncharacterized protein
D VK055_4131 hypothetical protein K09807 K09807; uncharacterized protein
D VK055_0094 hypothetical protein K09824 virK; uncharacterized protein
D VK055_0418 hypothetical protein K09824 virK; uncharacterized protein
D VK055_2321 hypothetical protein K05952 K05952; uncharacterized protein
D VK055_1506 hypothetical protein K09857 K09857; uncharacterized protein
D VK055_2568 hypothetical protein K09861 K09861; uncharacterized protein
D VK055_2467 hypothetical protein K09862 K09862; uncharacterized protein
D VK055_3093 hypothetical protein K09891 K09891; uncharacterized protein
D VK055_3299 hypothetical protein K09894 K09894; uncharacterized protein
D VK055_4138 yecA family protein K09895 K09895; uncharacterized protein
D VK055_3305 hypothetical protein K09896 K09896; uncharacterized protein
D VK055_3211 hypothetical protein K09897 K09897; uncharacterized protein
D VK055_3734 hypothetical protein K09898 K09898; uncharacterized protein
D VK055_4829 yfbV; conserved inner membrane protein K09899 K09899; uncharacterized protein
D VK055_0264 hypothetical protein K09901 K09901; uncharacterized protein
D VK055_0133 ycgL domain protein K09902 K09902; uncharacterized protein
D VK055_4897 hypothetical protein K09904 K09904; uncharacterized protein
D VK055_0060 yecM family protein K09907 K09907; uncharacterized protein
D VK055_3845 hypothetical protein K09908 K09908; uncharacterized protein
D VK055_2444 hypothetical protein K09910 K09910; uncharacterized protein
D VK055_1502 ycbG; macrodomain Ter protein K09911 K09911; uncharacterized protein
D VK055_0179 hypothetical protein K09912 K09912; uncharacterized protein
D VK055_1387 hypothetical protein K09915 K09915; uncharacterized protein
D VK055_1261 hypothetical protein K09916 K09916; uncharacterized protein
D VK055_0123 hypothetical protein K09917 K09917; uncharacterized protein
D VK055_0085 yebG; hypothetical protein regulated by LexA K09918 K09918; uncharacterized protein
D VK055_4027 hypothetical protein K09920 K09920; uncharacterized protein
D VK055_3166 hypothetical protein K09921 K09921; uncharacterized protein
D VK055_4084 hypothetical protein K09923 K09923; uncharacterized protein
D VK055_1541 hypothetical protein K09927 K09927; uncharacterized protein
D VK055_2208 antibiotic biosynthesis monooxygenase family protein K09932 K09932; uncharacterized protein
D VK055_2888 hypothetical protein K09937 K09937; uncharacterized protein
D VK055_2226 hypothetical protein K09945 K09945; uncharacterized protein
D VK055_4756 hypothetical protein K09954 K09954; uncharacterized protein
D VK055_3434 hypothetical protein K09958 K09958; uncharacterized protein
D VK055_4920 hypothetical protein K09968 K09968; uncharacterized protein
D VK055_2085 traB family protein K09973 K09973; uncharacterized protein
D VK055_1163 hutD family protein K09975 K09975; uncharacterized protein
D VK055_1048 hypothetical protein K09978 K09978; uncharacterized protein
D VK055_3918 putative uPF0306 protein yhbP K09979 K09979; uncharacterized protein
D VK055_2307 hypothetical protein K09982 K09982; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 6, 2024