+D GENES KO #

  KEGG Orthology (KO) - Companilactobacillus heilongjiangensis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:lhi00010] D JP39_07130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D JP39_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JP39_05380 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D JP39_00640 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D JP39_10305 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D JP39_08810 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JP39_10900 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JP39_07860 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JP39_07870 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JP39_06300 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JP39_07865 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JP39_02340 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_09565 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_07855 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JP39_05385 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JP39_04815 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D JP39_04820 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D JP39_04825 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_01730 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00840 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00850 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_03220 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JP39_06330 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D JP39_08010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JP39_02115 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_03420 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_03535 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_03705 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_04095 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_10875 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_10195 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_10390 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_05040 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_05045 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_05650 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_00140 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03560 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03015 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:lhi00020] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_02135 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JP39_04815 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D JP39_04820 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D JP39_04825 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:lhi00030] D JP39_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JP39_02675 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JP39_08180 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D JP39_07215 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JP39_01070 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JP39_06950 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JP39_03570 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JP39_11580 hypothetical protein K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D JP39_02385 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D JP39_03575 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D JP39_10130 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D JP39_08520 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D JP39_09000 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D JP39_10830 mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D JP39_08010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JP39_01625 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JP39_01000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JP39_03895 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12] D JP39_00335 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D JP39_08810 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JP39_10900 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JP39_00640 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D JP39_10305 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D JP39_05380 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:lhi00040] D JP39_08780 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JP39_01365 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D JP39_06950 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JP39_03570 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JP39_03545 AP endonuclease K01805 xylA; xylose isomerase [EC:5.3.1.5] D JP39_03035 L-fuculose kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D JP39_03040 fucI; sugar isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D JP39_03045 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:lhi00051] D JP39_12230 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JP39_03715 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JP39_02580 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D JP39_03040 fucI; sugar isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D JP39_03045 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D JP39_03035 L-fuculose kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D JP39_05380 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D JP39_00640 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D JP39_10305 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D JP39_05320 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D JP39_03545 AP endonuclease K01805 xylA; xylose isomerase [EC:5.3.1.5] D JP39_08810 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JP39_10900 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JP39_07860 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JP39_03575 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D JP39_05245 hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D JP39_05240 PTS fructose transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_10895 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_05315 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_00875 PTS sugar transporter K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JP39_02285 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D JP39_04235 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D JP39_02290 PTS mannose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_04225 hypothetical protein K02795 manY; mannose PTS system EIIC component D JP39_00865 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_10795 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_02295 PTS mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_04230 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_00870 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component C 00052 Galactose metabolism [PATH:lhi00052] D JP39_06330 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D JP39_08710 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D JP39_08715 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D JP39_06525 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D JP39_08780 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JP39_08010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JP39_07130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D JP39_09385 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JP39_08690 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D JP39_01380 gatC; PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D JP39_11265 tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144] D JP39_05380 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D JP39_11270 tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D JP39_11255 galactose-6-phosphate isomerase K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26] D JP39_11260 galactose-6-phosphate isomerase K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26] D JP39_05105 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85] D JP39_05095 PTS lactose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207] D JP39_05100 PTS lactose transporter subunit IIB K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207] D JP39_12250 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D JP39_08680 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D JP39_06375 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D JP39_00145 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D JP39_10805 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D JP39_00885 agaS; tagatose-6-phosphate ketose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism D JP39_01365 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] C 00500 Starch and sucrose metabolism [PATH:lhi00500] D JP39_00250 PTS trehalose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D JP39_08685 PTS sucrose transporter subunit IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D JP39_12250 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D JP39_08680 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D JP39_06375 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D JP39_08780 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JP39_03520 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] D JP39_03405 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_10880 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_05035 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_03395 transcription antiterminator K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_03905 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_10890 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_05030 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_03070 PTS sugar transporter subunit IIA K02761 celB; cellobiose PTS system EIIC component D JP39_03400 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_08900 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_04100 hypothetical protein K02761 celB; cellobiose PTS system EIIC component D JP39_10885 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02761 celB; cellobiose PTS system EIIC component D JP39_00305 PTS cellbiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_10395 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_05055 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component D JP39_02115 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_03420 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_03535 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_03705 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_04095 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_10875 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_10195 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_10390 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_05040 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_05045 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JP39_11015 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D JP39_11020 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D JP39_11010 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D JP39_11025 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D JP39_11005 glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D JP39_00145 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D JP39_06340 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8] D JP39_06335 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D JP39_05650 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_00140 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03560 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03015 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_00125 PTS alpha-glucoside transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D JP39_00155 PTS sugar transporter subunit IIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D JP39_00120 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D JP39_00160 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D JP39_02125 hypothetical protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D JP39_01220 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D JP39_08010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JP39_07130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D JP39_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JP39_12230 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JP39_03715 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lhi00520] D JP39_05650 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_00140 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03560 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03015 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_02275 PTS N-acetylglucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D JP39_00895 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D JP39_00905 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D JP39_11880 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D JP39_12230 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JP39_03715 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JP39_03145 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JP39_03140 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D JP39_01620 glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D JP39_04245 N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D JP39_00260 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D JP39_04475 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JP39_01670 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JP39_03120 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JP39_03760 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D JP39_08805 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D JP39_07130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D JP39_08010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JP39_08780 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JP39_08710 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D JP39_08715 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D JP39_06525 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D JP39_09385 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JP39_00875 PTS sugar transporter K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JP39_02285 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D JP39_04235 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D JP39_02290 PTS mannose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_04225 hypothetical protein K02795 manY; mannose PTS system EIIC component D JP39_00865 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_10795 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_02295 PTS mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_04230 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_00870 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JP39_02580 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D JP39_11015 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D JP39_11020 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:lhi00620] D JP39_04815 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D JP39_04820 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D JP39_04825 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_03220 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JP39_11955 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_12030 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_03210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_03095 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JP39_05385 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JP39_07185 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D JP39_00210 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D JP39_02235 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D JP39_09835 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D JP39_01730 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00840 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00850 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_04810 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D JP39_00580 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D JP39_00585 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D JP39_02085 glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] D JP39_06325 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D JP39_08700 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D JP39_02135 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JP39_05195 malate dehydrogenase K22212 mleA; malolactic enzyme [EC:4.1.1.101] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lhi00630] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JP39_00185 hypothetical protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D JP39_01030 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JP39_01350 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JP39_07515 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JP39_04280 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_10075 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JP39_05160 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JP39_10315 acyl-CoA synthetase K22133 AAE3; oxalate---CoA ligase [EC:6.2.1.8] C 00640 Propanoate metabolism [PATH:lhi00640] D JP39_00210 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D JP39_11955 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_12030 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_03210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_03095 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_01730 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00840 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00850 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_02085 glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] C 00650 Butanoate metabolism [PATH:lhi00650] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JP39_00190 crotonase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D JP39_00205 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D JP39_03220 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JP39_00185 hypothetical protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D JP39_12310 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JP39_08760 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D JP39_09485 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JP39_09490 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:lhi00660] D JP39_09485 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JP39_09490 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00562 Inositol phosphate metabolism [PATH:lhi00562] D JP39_04845 fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JP39_06790 NAD(P)-dependent oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] D JP39_07860 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:lhi00190] D JP39_07065 hypothetical protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D JP39_11930 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D JP39_11990 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D JP39_11985 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D JP39_04450 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D JP39_04460 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D JP39_04455 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D JP39_04445 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D JP39_04465 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D JP39_04430 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JP39_04440 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JP39_04435 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D JP39_05610 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D JP39_11225 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:lhi00680] D JP39_04280 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JP39_07855 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JP39_08810 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JP39_10900 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JP39_00640 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D JP39_10305 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D JP39_05380 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D JP39_11955 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_12030 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_03210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_03095 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JP39_02340 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_09565 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_06735 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JP39_01375 oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JP39_06740 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:lhi00910] D JP39_07515 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JP39_07455 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:lhi00920] D JP39_10355 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JP39_10320 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JP39_10325 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JP39_02685 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D JP39_11420 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D JP39_11680 Crp/Fnr family transcriptional regulator K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D JP39_08605 homoserine O-succinyltransferase K23304 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JP39_08610 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:lhi00061] D JP39_06885 acyl carrier protein K02078 acpP; acyl carrier protein D JP39_02090 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_08145 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_01370 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_00205 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D JP39_10360 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:lhi00071] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JP39_10360 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D JP39_03220 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:lhi00561] D JP39_10075 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JP39_05160 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JP39_03765 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D JP39_03770 dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D JP39_03775 PTS mannnose family transporter subunit IIA K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D JP39_09130 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D JP39_09135 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D JP39_00230 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D JP39_06890 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D JP39_05590 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JP39_06660 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JP39_08935 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D JP39_07785 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D JP39_06385 hypothetical protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D JP39_07770 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D JP39_03615 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D JP39_03620 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D JP39_05695 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D JP39_08690 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:lhi00564] D JP39_00235 alpha-glycerophosphate oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21] D JP39_01640 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D JP39_05590 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JP39_06660 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JP39_08935 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D JP39_02785 cell surface protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D JP39_03255 hydrolase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D JP39_00350 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D JP39_00910 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D JP39_06620 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D JP39_08135 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D JP39_00790 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:lhi00600] D JP39_08690 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D JP39_11090 lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D JP39_10655 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:lhi00230] D JP39_04695 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D JP39_10830 mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D JP39_08010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JP39_01625 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JP39_01000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JP39_06685 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D JP39_06665 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D JP39_06675 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D JP39_06690 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D JP39_06700 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D JP39_06695 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D JP39_06680 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D JP39_06710 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D JP39_08975 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D JP39_06715 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D JP39_06705 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D JP39_08970 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JP39_00150 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JP39_06670 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JP39_06510 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D JP39_01770 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D JP39_12280 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D JP39_02740 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D JP39_08980 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D JP39_11080 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JP39_07520 guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D JP39_05085 chlorohydrolase K01487 guaD; guanine deaminase [EC:3.5.4.3] D JP39_12255 cytosine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D JP39_06990 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D JP39_11590 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D JP39_11620 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JP39_11625 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JP39_08335 ribonucleoside-triphosphate reductase K00527 rtpR; ribonucleoside-triphosphate reductase (thioredoxin) [EC:1.17.4.2] D JP39_07655 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D JP39_06050 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D JP39_01560 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D JP39_08210 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D JP39_01210 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D JP39_11740 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D JP39_02630 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D JP39_01980 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D JP39_05480 hypothetical protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D JP39_07455 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:lhi00240] D JP39_05730 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JP39_10550 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JP39_05735 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JP39_10555 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JP39_04945 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D JP39_00320 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JP39_04950 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JP39_04965 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D JP39_04960 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D JP39_04955 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D JP39_06635 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D JP39_01665 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D JP39_05435 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D JP39_04425 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D JP39_05740 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D JP39_02630 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D JP39_05970 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D JP39_01205 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D JP39_08335 ribonucleoside-triphosphate reductase K00527 rtpR; ribonucleoside-triphosphate reductase (thioredoxin) [EC:1.17.4.2] D JP39_07655 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D JP39_11620 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JP39_11625 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JP39_02500 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D JP39_02395 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D JP39_04405 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D JP39_05500 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:lhi00250] D JP39_12195 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D JP39_10590 asparagine synthase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D JP39_10035 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D JP39_01715 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D JP39_10375 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JP39_10370 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JP39_11740 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D JP39_08970 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JP39_00150 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JP39_04945 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D JP39_12310 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JP39_07515 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JP39_05730 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JP39_10550 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JP39_05735 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JP39_10555 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JP39_06695 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D JP39_03145 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JP39_06685 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:lhi00260] D JP39_07715 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JP39_02185 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JP39_07670 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JP39_02180 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JP39_02170 serine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D JP39_02175 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D JP39_04280 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JP39_10075 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JP39_05160 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JP39_02340 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_09565 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_06735 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JP39_01375 oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JP39_06740 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_10175 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D JP39_10180 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D JP39_10190 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JP39_02080 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D JP39_02075 phosphoribosylanthranilate isomerase K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:lhi00270] D JP39_08605 homoserine O-succinyltransferase K23304 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JP39_08610 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D JP39_06925 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JP39_12300 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JP39_04080 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JP39_00410 homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D JP39_07615 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JP39_04705 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D JP39_06780 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D JP39_06935 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D JP39_07715 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JP39_02185 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JP39_07670 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JP39_02180 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JP39_08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JP39_01730 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00840 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00850 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_10175 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D JP39_10180 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D JP39_06735 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JP39_01375 oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JP39_06740 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:lhi00280] D JP39_08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_01120 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JP39_08760 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lhi00290] D JP39_10190 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JP39_09485 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JP39_08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:lhi00300] D JP39_02180 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JP39_07715 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JP39_02185 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JP39_07670 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JP39_07690 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JP39_07685 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D JP39_00515 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D JP39_06100 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JP39_03075 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JP39_05015 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JP39_07720 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D JP39_07705 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D JP39_07675 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D JP39_09080 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D JP39_07695 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D JP39_01695 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:lhi00310] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JP39_12310 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:lhi00220] D JP39_07470 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D JP39_10375 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JP39_10370 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JP39_07475 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D JP39_06695 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D JP39_07515 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JP39_07455 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D JP39_00505 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D JP39_00510 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D JP39_00500 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D JP39_00515 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:lhi00330] D JP39_01205 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D JP39_00750 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D JP39_12020 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D JP39_09885 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D JP39_09895 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D JP39_11220 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D JP39_10930 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism C 00350 Tyrosine metabolism [PATH:lhi00350] D JP39_03220 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JP39_12310 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism C 00380 Tryptophan metabolism [PATH:lhi00380] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lhi00400] D JP39_02080 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D JP39_02075 phosphoribosylanthranilate isomerase K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JP39_03920 hypothetical protein K06209 pheB; chorismate mutase [EC:5.4.99.5] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:lhi00430] D JP39_01715 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D JP39_03095 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JP39_11955 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_12030 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JP39_03210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:lhi00440] D JP39_02215 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D JP39_02220 2-aminoethylphosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00450 Selenocompound metabolism [PATH:lhi00450] D JP39_06925 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JP39_12300 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JP39_04080 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JP39_00060 cysteine sulfinate desulfinase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D JP39_08020 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D JP39_00325 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D JP39_01580 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:lhi00460] D JP39_03520 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] D JP39_10590 asparagine synthase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D JP39_04280 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:lhi00470] D JP39_01710 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JP39_00830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JP39_01250 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D JP39_01260 cytochrome C552 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D JP39_06695 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D JP39_02735 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D JP39_04640 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JP39_12195 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D JP39_07720 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D JP39_07705 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:lhi00480] D JP39_10690 peptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D JP39_11115 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D JP39_06530 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D JP39_07215 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JP39_01070 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JP39_02675 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JP39_00750 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:lhi00511] D JP39_03655 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D JP39_03060 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis D JP39_09400 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis [PATH:lhi00542] D JP39_08115 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lhi00541] D JP39_08780 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JP39_06525 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D JP39_09385 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JP39_02580 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D JP39_01620 glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D JP39_08805 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:lhi00550] D JP39_04475 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JP39_01670 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JP39_03120 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JP39_07345 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D JP39_04640 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JP39_00830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JP39_01695 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D JP39_06625 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JP39_08185 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JP39_07605 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D JP39_04635 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JP39_04645 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JP39_05800 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JP39_07435 carboxypeptidase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D JP39_11715 glycosyl transferase family 51 K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4] D JP39_04630 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B D JP39_07150 cell division protein FtsI K21465 pbpA; penicillin-binding protein A D JP39_12185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JP39_04400 UDP-N-acetylmuramyl peptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D JP39_12035 cobalamin biosynthesis protein CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D JP39_02775 carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B C 00552 Teichoic acid biosynthesis [PATH:lhi00552] D JP39_08185 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JP39_07605 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D JP39_08115 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D JP39_09100 acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D JP39_01250 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D JP39_01260 cytochrome C552 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D JP39_01255 alanine transporter K03739 dltB; membrane protein involved in D-alanine export D JP39_01265 hypothetical protein K03740 dltD; D-alanine transfer protein D JP39_10205 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D JP39_11705 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D JP39_09375 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D JP39_07770 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D JP39_03615 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D JP39_03620 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D JP39_05695 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D JP39_07785 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D JP39_07780 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:lhi00543] D JP39_08115 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D JP39_11155 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D JP39_05305 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D JP39_09525 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:lhi00730] D JP39_12000 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D JP39_04555 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_04710 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_04560 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D JP39_07410 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D JP39_06955 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D JP39_06945 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D JP39_01980 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:lhi00740] D JP39_06115 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D JP39_06125 pyrimidine reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D JP39_06110 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D JP39_06120 hypothetical protein K00793 ribE; riboflavin synthase [EC:2.5.1.9] D JP39_06565 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D JP39_04330 NADPH-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D JP39_04695 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:lhi00750] D JP39_06740 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JP39_02175 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:lhi00760] D JP39_09090 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D JP39_04110 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D JP39_07245 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D JP39_09085 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D JP39_01575 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D JP39_08205 inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D JP39_12310 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:lhi00770] D JP39_09485 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JP39_00590 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D JP39_11085 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D JP39_03510 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D JP39_04870 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D JP39_07315 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D JP39_01705 4-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D JP39_08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:lhi00780] D JP39_02090 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_08145 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_01370 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00785 Lipoic acid metabolism [PATH:lhi00785] D JP39_01650 hypothetical protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204] D JP39_05770 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_04815 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D JP39_04820 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D JP39_04825 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00790 Folate biosynthesis [PATH:lhi00790] D JP39_08390 hypothetical protein K19965 folQ; dihydroneopterin triphosphate pyrophosphohydrolase [EC:3.6.1.67] D JP39_08415 dienelactone hydrolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D JP39_08410 hypothetical protein K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D JP39_05505 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D JP39_04575 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D JP39_08400 hypothetical protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D JP39_06115 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D JP39_11150 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] C 00670 One carbon pool by folate [PATH:lhi00670] D JP39_05505 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D JP39_05755 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D JP39_07025 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D JP39_04280 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JP39_06675 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D JP39_06670 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JP39_06975 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D JP39_05500 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D JP39_07145 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D JP39_00440 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:lhi00860] D JP39_03835 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lhi00130] D JP39_00655 ubiquinone biosynthesis protein UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D JP39_09850 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D JP39_09845 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D JP39_07445 hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D JP39_11960 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D JP39_01130 flavodoxin K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D JP39_11735 short-chain dehydrogenase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D JP39_10910 NmrA family transcriptional regulator K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:lhi00900] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JP39_08760 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D JP39_08765 nucleoid-structuring protein H-NS K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D JP39_05835 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D JP39_05845 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D JP39_05840 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D JP39_05850 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D JP39_07010 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D JP39_06625 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:lhi01054] D JP39_12195 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:lhi00946] D JP39_03520 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:lhi00311] D JP39_10140 choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11] D JP39_10915 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:lhi00332] D JP39_09885 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D JP39_09895 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:lhi00261] D JP39_07715 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JP39_02185 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JP39_07670 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JP39_07690 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JP39_07685 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:lhi00521] D JP39_07130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D JP39_08010 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JP39_04845 fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D JP39_07130 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D JP39_02090 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_08145 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_01370 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D JP39_06885 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:lhi00999] D JP39_07615 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JP39_03520 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:lhi00362] D JP39_05900 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D JP39_09975 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:lhi00627] D JP39_07185 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D JP39_03495 3,4-dihydroxybenzoate decarboxylase K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59] D JP39_03500 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K22959 lpdB; gallate decarboxylase subunit B D JP39_03505 amino acid decarboxylase K22960 lpdD; gallate decarboxylase subunit D C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:lhi00625] D JP39_03220 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D JP39_05900 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation D JP39_00210 3-oxoacid CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D JP39_05900 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:lhi00626] D JP39_03220 acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:lhi03020] D JP39_01825 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JP39_01830 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JP39_02005 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JP39_06985 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JP39_01660 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors D JP39_01105 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:lhi03010] D JP39_06645 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D JP39_01905 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D JP39_04545 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D JP39_01960 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D JP39_11780 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D JP39_01850 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D JP39_01945 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D JP39_02040 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D JP39_01870 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D JP39_02000 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D JP39_01845 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D JP39_01995 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D JP39_01940 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JP39_02105 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JP39_04900 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D JP39_06845 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D JP39_01920 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D JP39_11770 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D JP39_01895 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D JP39_04895 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D JP39_05985 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D JP39_02450 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D JP39_01890 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D JP39_01875 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D JP39_01880 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D JP39_01935 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D JP39_01950 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D JP39_02460 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D JP39_11750 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D JP39_02455 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D JP39_02445 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D JP39_02035 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D JP39_01925 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D JP39_01970 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D JP39_01910 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D JP39_02010 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D JP39_01955 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D JP39_06830 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D JP39_07265 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D JP39_07055 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D JP39_01900 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D JP39_01885 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D JP39_01930 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D JP39_07045 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D JP39_06910 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D JP39_01915 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D JP39_01965 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D JP39_01685 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D JP39_05355 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D JP39_11820 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D JP39_07270 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D JP39_01990 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D JP39_07765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_11695 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_10500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_02845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_07750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_02850 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_10485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_11690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_07745 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_11685 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_10480 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_02855 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:lhi00970] D JP39_07755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JP39_10490 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JP39_08880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_02890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07090 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07740 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JP39_09235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JP39_02915 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JP39_02950 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JP39_02980 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D JP39_02975 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JP39_04190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JP39_09115 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JP39_02935 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JP39_07635 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JP39_04370 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JP39_02920 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JP39_07485 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JP39_01815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JP39_02880 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JP39_02970 tRNA-His K14226 tRNA-His; tRNA His D JP39_02925 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JP39_07760 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JP39_10495 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JP39_01805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_02985 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_02870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_02885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_07580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_09055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_00445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JP39_02865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JP39_02905 tRNA-Met K14230 tRNA-Met; tRNA Met D JP39_02900 tRNA-Met K14230 tRNA-Met; tRNA Met D JP39_02910 tRNA-Met K14230 tRNA-Met; tRNA Met D JP39_02945 tRNA-Met K14230 tRNA-Met; tRNA Met D JP39_02955 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D JP39_02895 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JP39_02940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JP39_07735 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JP39_02930 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JP39_06505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JP39_02875 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JP39_01455 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JP39_01810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JP39_09230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JP39_02965 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D JP39_02960 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JP39_09120 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JP39_01800 tRNA-Val K14237 tRNA-Val; tRNA Val D JP39_02860 tRNA-Val K14237 tRNA-Val; tRNA Val D JP39_07630 tRNA-Val K14237 tRNA-Val; tRNA Val D JP39_02410 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D JP39_08945 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JP39_08940 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D JP39_08950 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D JP39_02695 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JP39_06015 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JP39_04135 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D JP39_05955 glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JP39_05950 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JP39_07295 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JP39_09240 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JP39_00325 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D JP39_02415 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JP39_01580 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JP39_06975 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D JP39_04570 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JP39_07595 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JP39_04685 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JP39_01790 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JP39_07450 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JP39_06610 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JP39_06020 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JP39_07175 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JP39_07170 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JP39_04940 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JP39_01500 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:lhi03060] D JP39_01975 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JP39_02435 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JP39_07840 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JP39_02665 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D JP39_11830 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D JP39_07190 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D JP39_08085 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JP39_06860 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JP39_06870 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D JP39_05870 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D JP39_05750 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:lhi04122] D JP39_04555 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_04710 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_04720 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D JP39_04560 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:lhi03018] D JP39_07855 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JP39_07830 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JP39_01700 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JP39_05665 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JP39_08120 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-] D JP39_04795 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D JP39_04905 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D JP39_05380 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D JP39_06545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JP39_02600 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JP39_11225 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:lhi03030] D JP39_03110 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JP39_05375 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JP39_06605 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D JP39_02480 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JP39_02510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JP39_04890 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JP39_11810 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JP39_11745 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D JP39_05945 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D JP39_11775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JP39_00815 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JP39_05765 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JP39_05540 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D JP39_07325 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JP39_08960 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:lhi03410] D JP39_05805 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JP39_03090 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D JP39_07640 DNA-3-methyladenine glycosidase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D JP39_07320 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D JP39_10065 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D JP39_03115 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D JP39_05995 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D JP39_07325 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JP39_06515 single-stranded DNA-binding protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JP39_08960 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:lhi03420] D JP39_01740 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D JP39_11845 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D JP39_07985 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D JP39_04275 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D JP39_07990 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D JP39_05265 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D JP39_01495 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_11130 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_11910 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_03485 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_08965 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_07325 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JP39_08960 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JP39_01105 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:lhi03430] D JP39_02635 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D JP39_02720 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D JP39_02640 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D JP39_01495 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_11130 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_11910 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_03485 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_08965 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_07020 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D JP39_07015 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D JP39_06515 single-stranded DNA-binding protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JP39_11775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JP39_05375 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JP39_06605 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D JP39_11810 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JP39_02480 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JP39_04890 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JP39_02510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JP39_03110 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JP39_08960 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:lhi03440] D JP39_06515 single-stranded DNA-binding protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JP39_11775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JP39_11800 recombinase RecF K03629 recF; DNA replication and repair protein RecF D JP39_05960 DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D JP39_02490 recombinase K06187 recR; recombination protein RecR D JP39_08125 recombinase RecA K03553 recA; recombination protein RecA D JP39_07325 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JP39_02645 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D JP39_02650 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D JP39_06895 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JP39_04735 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D JP39_05375 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JP39_06605 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D JP39_11810 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JP39_02480 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JP39_04890 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JP39_02510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JP39_03110 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JP39_06980 primosomal protein DnaI K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:lhi02010] D JP39_10355 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JP39_10320 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JP39_10325 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JP39_06160 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D JP39_06150 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JP39_06155 hypothetical protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JP39_01300 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein D JP39_01295 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein D JP39_01290 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D JP39_03955 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D JP39_05625 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D JP39_05620 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JP39_05630 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JP39_03950 hypothetical protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JP39_05635 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JP39_03660 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JP39_06345 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JP39_03685 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D JP39_03675 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D JP39_03680 sugar ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D JP39_09005 ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D JP39_09945 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D JP39_05460 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D JP39_09955 glycerol-3-phosphate ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D JP39_05465 ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D JP39_09950 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D JP39_05470 ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D JP39_09960 glycerol-3-phosphate ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D JP39_05475 sugar ABC transporter ATPase K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D JP39_02260 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JP39_08065 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JP39_02255 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D JP39_08060 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D JP39_02250 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D JP39_08055 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D JP39_02245 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JP39_08050 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JP39_02195 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JP39_02205 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D JP39_02210 ABC transporter permease K02042 phnE; phosphonate transport system permease protein D JP39_02200 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D JP39_11390 glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D JP39_11380 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D JP39_11385 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D JP39_11395 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D JP39_08615 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D JP39_08620 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D JP39_08625 arginine ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D JP39_06940 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D JP39_03425 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D JP39_03440 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D JP39_03435 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D JP39_03430 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D JP39_11540 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D JP39_11545 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D JP39_11550 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D JP39_11555 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D JP39_11560 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D JP39_10665 manganese ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein D JP39_10670 hypothetical protein K19976 mntB; manganese transport system permease protein D JP39_10675 manganese ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D JP39_02025 cobalt ABC transporter ATP-binding protein K16785 ecfT; energy-coupling factor transport system permease protein D JP39_03815 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D JP39_02015 cbiO; cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D JP39_02020 cobalt ABC transporter K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D JP39_00275 multidrug ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein D JP39_00270 hypothetical protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D JP39_08280 hypothetical protein K11632 bceB; bacitracin transport system permease protein D JP39_08285 multidrug ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D JP39_04065 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D JP39_04070 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D JP39_02095 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D JP39_04385 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D JP39_04390 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D JP39_11975 cysteine ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D JP39_11980 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D JP39_01680 multidrug transporter K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:lhi02060] D JP39_08475 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D JP39_08480 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D JP39_05650 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_00140 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03560 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03015 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_02275 PTS N-acetylglucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D JP39_00250 PTS trehalose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D JP39_08685 PTS sucrose transporter subunit IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D JP39_09510 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_02155 beta-xylosidase K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_03880 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_03020 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_02120 hypothetical protein K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_03550 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_03580 PTS sucrose transporter subunit IIBC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_00125 PTS alpha-glucoside transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D JP39_00155 PTS sugar transporter subunit IIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D JP39_05095 PTS lactose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207] D JP39_05100 PTS lactose transporter subunit IIB K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207] D JP39_03405 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_10880 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_05035 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_03395 transcription antiterminator K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_03905 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_10890 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_05030 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_03070 PTS sugar transporter subunit IIA K02761 celB; cellobiose PTS system EIIC component D JP39_03400 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_08900 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_04100 hypothetical protein K02761 celB; cellobiose PTS system EIIC component D JP39_10885 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02761 celB; cellobiose PTS system EIIC component D JP39_00305 PTS cellbiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_10395 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_05055 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component D JP39_00875 PTS sugar transporter K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JP39_02285 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D JP39_04235 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D JP39_02290 PTS mannose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_04225 hypothetical protein K02795 manY; mannose PTS system EIIC component D JP39_00865 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_10795 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_02295 PTS mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_04230 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_00870 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_10805 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D JP39_01380 gatC; PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D JP39_11245 PTS sugar transporter subunit IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D JP39_11240 PTS fructose transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204] D JP39_11235 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component D JP39_05275 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component D JP39_05240 PTS fructose transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_10895 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_05315 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_05245 hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D JP39_05320 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:lhi03070] D JP39_02435 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JP39_07840 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JP39_01975 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JP39_02665 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D JP39_11830 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D JP39_07190 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D JP39_08085 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JP39_06870 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D JP39_06860 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:lhi02020] D JP39_08070 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JP39_02265 regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D JP39_08075 PhoP family transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D JP39_02260 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JP39_08065 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JP39_00480 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D JP39_00460 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D JP39_00450 PhoP family transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D JP39_11815 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JP39_08285 multidrug ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D JP39_08280 hypothetical protein K11632 bceB; bacitracin transport system permease protein D JP39_08295 hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D JP39_08290 transcriptional regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D JP39_01250 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D JP39_01255 alanine transporter K03739 dltB; membrane protein involved in D-alanine export D JP39_01260 cytochrome C552 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D JP39_01265 hypothetical protein K03740 dltD; D-alanine transfer protein D JP39_07545 hypothetical protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D JP39_07540 transcriptional regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR D JP39_07205 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D JP39_07210 PhoB family transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D JP39_08360 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_08910 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_11490 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_11500 LytTR family transcriptional regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_08365 hypothetical protein K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_08915 hypothetical protein K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_06255 antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D JP39_00370 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D JP39_00365 transcriptional regulator K07693 desR; two-component system, NarL family, response regulator DesR D JP39_07515 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JP39_08550 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D JP39_03700 hypothetical protein K07720 yesN; two-component system, response regulator YesN D JP39_11990 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D JP39_11985 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D JP39_05220 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D JP39_08805 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D JP39_00750 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:lhi02024] D JP39_06935 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D JP39_10360 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D JP39_06125 pyrimidine reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D JP39_06765 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D JP39_08360 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_08910 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_11490 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_11500 LytTR family transcriptional regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_08365 hypothetical protein K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_08915 hypothetical protein K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_07545 hypothetical protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D JP39_07540 transcriptional regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR D JP39_11540 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D JP39_11545 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D JP39_11550 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D JP39_11555 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D JP39_11560 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D JP39_10445 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JP39_10435 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JP39_10440 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JP39_10425 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D JP39_10430 peptide ABC transporter substrate-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JP39_11270 tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D JP39_11830 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D JP39_07190 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D JP39_02435 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JP39_07840 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JP39_01975 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JP39_02665 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D JP39_08085 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JP39_06870 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D JP39_06860 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:lhi02040] D JP39_08615 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D JP39_05940 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D JP39_08550 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D JP39_07855 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D JP39_03835 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:lhi01501] D JP39_11540 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D JP39_11545 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D JP39_11550 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D JP39_11555 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D JP39_11560 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D JP39_10915 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D JP39_02095 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D JP39_05800 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JP39_02775 carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B D JP39_07435 carboxypeptidase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:lhi01502] D JP39_00830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JP39_01710 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JP39_01695 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D JP39_04635 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JP39_04645 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lhi01503] D JP39_06025 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JP39_00480 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D JP39_01250 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D JP39_01255 alanine transporter K03739 dltB; membrane protein involved in D-alanine export D JP39_01260 cytochrome C552 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D JP39_01265 hypothetical protein K03740 dltD; D-alanine transfer protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:lhi01000] C 01001 Protein kinases [BR:lhi01001] D JP39_06960 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D JP39_09420 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D JP39_08070 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JP39_00460 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D JP39_08295 hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D JP39_07545 hypothetical protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D JP39_07205 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D JP39_00370 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D JP39_08360 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_08910 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_11490 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:lhi01009] D JP39_05380 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D JP39_06965 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:lhi01002] D JP39_05750 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D JP39_12040 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D JP39_02380 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D JP39_00775 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D JP39_11080 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JP39_05120 hypothetical protein K07010 K07010; putative glutamine amidotransferase D JP39_11585 glycoside hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D JP39_06750 cell wall-associated glycoside hydrolase (NLP/P60 protein) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D JP39_06685 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D JP39_03145 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JP39_10035 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D JP39_10140 choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11] D JP39_06520 sortase K07284 srtA; sortase A [EC:3.4.22.70] D JP39_03910 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-] D JP39_04205 peptidase U34 K08659 pepDA; dipeptidase [EC:3.4.-.-] D JP39_10170 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-] D JP39_10185 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-] D JP39_00605 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-] D JP39_10535 peptidase U34 K08659 pepDA; dipeptidase [EC:3.4.-.-] D JP39_01865 hypothetical protein K07052 K07052; CAAX protease family protein D JP39_02320 hypothetical protein K07052 K07052; CAAX protease family protein D JP39_04380 hypothetical protein K07052 K07052; CAAX protease family protein D JP39_02590 CAAX protease K07052 K07052; CAAX protease family protein D JP39_00730 hypothetical protein K07052 K07052; CAAX protease family protein D JP39_10690 peptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D JP39_10005 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D JP39_10010 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D JP39_02780 dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-] D JP39_06100 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JP39_03075 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JP39_05015 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JP39_05920 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D JP39_07695 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D JP39_08790 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D JP39_05270 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D JP39_02760 dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D JP39_01775 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D JP39_04290 heat-shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D JP39_06615 metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D JP39_10965 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D JP39_00480 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D JP39_12185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JP39_07930 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D JP39_02375 X-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11] D JP39_04875 peptidase K07177 K07177; Lon-like protease D JP39_06730 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D JP39_05870 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D JP39_11220 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D JP39_10930 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D JP39_07140 transporter K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D JP39_07815 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D JP39_05560 ATP-dependent protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] C 01003 Glycosyltransferases [BR:lhi01003] D JP39_07785 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D JP39_06385 hypothetical protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D JP39_07780 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] D JP39_11010 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D JP39_05800 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JP39_02775 carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B D JP39_07435 carboxypeptidase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D JP39_11715 glycosyl transferase family 51 K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4] D JP39_09100 acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D JP39_08115 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D JP39_11155 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D JP39_05305 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D JP39_09525 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:lhi01005] D JP39_09400 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] D JP39_07530 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D JP39_09070 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D JP39_08115 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D JP39_11945 bactoprenol glucosyl transferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lhi01011] D JP39_04475 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JP39_01670 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JP39_03120 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JP39_07345 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D JP39_04640 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JP39_00830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JP39_01710 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JP39_02735 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D JP39_07815 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D JP39_04635 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JP39_04645 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JP39_08185 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JP39_07605 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D JP39_05800 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JP39_02775 carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B D JP39_07435 carboxypeptidase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D JP39_11715 glycosyl transferase family 51 K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4] D JP39_04630 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B D JP39_07150 cell division protein FtsI K21465 pbpA; penicillin-binding protein A D JP39_12185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JP39_11585 glycoside hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D JP39_06750 cell wall-associated glycoside hydrolase (NLP/P60 protein) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D JP39_06520 sortase K07284 srtA; sortase A [EC:3.4.22.70] D JP39_07165 ABC transporter substrate-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D JP39_06025 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:lhi01004] D JP39_02090 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_08145 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_01370 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JP39_00205 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D JP39_11090 lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D JP39_10655 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D JP39_10360 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D JP39_06890 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D JP39_05590 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JP39_06660 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:lhi01008] D JP39_12195 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:lhi01006] D JP39_07010 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D JP39_06625 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JP39_07110 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D JP39_07445 hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D JP39_11960 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:lhi01007] D JP39_02410 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D JP39_04940 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JP39_01500 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JP39_02415 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JP39_07450 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JP39_01580 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JP39_04685 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JP39_04570 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JP39_07595 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JP39_01790 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JP39_06015 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JP39_04135 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D JP39_06020 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JP39_05955 glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JP39_05950 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JP39_09240 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JP39_06610 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JP39_07295 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JP39_02695 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JP39_07175 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JP39_07170 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JP39_07675 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D JP39_09080 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D JP39_12300 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JP39_04080 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JP39_00515 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D JP39_08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JP39_02220 2-aminoethylphosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D JP39_06740 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:lhi00194] D JP39_04465 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D JP39_04460 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D JP39_04455 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D JP39_04450 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D JP39_04445 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D JP39_04440 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JP39_04435 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D JP39_04430 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:lhi03000] D JP39_03780 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D JP39_05655 AraC family transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D JP39_03480 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D JP39_11250 DeoR faimly transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D JP39_03555 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D JP39_05325 DeoR faimly transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D JP39_02060 cytochrome C K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D JP39_02150 alkaline phosphatase K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D JP39_02765 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JP39_03565 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JP39_08720 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JP39_12235 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D JP39_08675 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D JP39_03645 hypothetical protein K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D JP39_03010 transcriptional regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D JP39_01225 hypothetical protein K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D JP39_01230 GntR family transcriptional regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D JP39_03390 hypothetical protein K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D JP39_10200 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D JP39_09110 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D JP39_08525 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D JP39_00855 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D JP39_08695 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D JP39_02100 hypothetical protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D JP39_11635 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D JP39_09855 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D JP39_09890 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D JP39_07945 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D JP39_11280 hypothetical protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D JP39_10290 Fur family transcriptional regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D JP39_10245 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D JP39_10330 hypothetical protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D JP39_11175 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D JP39_08515 ArsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D JP39_09430 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D JP39_04140 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D JP39_01425 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D JP39_04995 transcriptional regulator K10947 K10947; PadR family transcriptional regulator D JP39_01445 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D JP39_09475 hypothetical protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D JP39_00165 RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D JP39_01615 transcriptional regulator K09685 purR; HTH-type transcriptional regulator, purine operon repressor D JP39_10810 transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D JP39_05150 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D JP39_02575 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D JP39_06485 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator D JP39_11765 DNA-binding protein K07729 K07729; putative transcriptional regulator D JP39_10870 hypothetical protein K03491 licR; probable licABCH operon transcriptional regulator D JP39_10230 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D JP39_12125 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JP39_01360 hypothetical protein K02443 glpP; glycerol uptake operon antiterminator D JP39_05090 transcription antiterminator lact K02531 lacT; transcriptional antiterminator D JP39_05115 transcription antiterminator lact K02531 lacT; transcriptional antiterminator D JP39_06555 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor D JP39_07875 SorC family transcriptional regulator K05311 cggR; central glycolytic genes regulator D JP39_05740 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D JP39_07310 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D JP39_04615 protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:lhi03021] D JP39_01105 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D JP39_02005 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JP39_01825 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JP39_01830 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JP39_01660 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D JP39_06985 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JP39_05940 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D JP39_02430 hypothetical protein K27000 sigH; RNA polymerase sigma-H factor D JP39_08550 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D JP39_06595 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D JP39_07030 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D JP39_02440 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D JP39_07160 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D JP39_00600 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:lhi03019] D JP39_06880 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JP39_04795 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D JP39_04905 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D JP39_08120 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-] D JP39_07830 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JP39_07415 3'-5' exonuclease K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D JP39_01700 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JP39_02690 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D JP39_05665 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JP39_07855 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JP39_05380 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D JP39_06545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JP39_02600 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JP39_11225 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JP39_07970 ATPase P K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:lhi03011] D JP39_06645 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D JP39_01905 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D JP39_04545 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D JP39_01960 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D JP39_11780 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D JP39_01850 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D JP39_01945 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D JP39_02040 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D JP39_01870 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D JP39_02000 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D JP39_01845 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D JP39_01995 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D JP39_01940 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JP39_02105 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JP39_04900 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D JP39_06845 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D JP39_01920 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D JP39_11770 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D JP39_01895 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D JP39_04895 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D JP39_05985 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D JP39_02450 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D JP39_01890 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D JP39_01875 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D JP39_01880 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D JP39_01935 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D JP39_01950 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D JP39_11750 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D JP39_02455 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D JP39_02445 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D JP39_02460 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D JP39_02035 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D JP39_01925 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D JP39_01970 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D JP39_01910 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D JP39_02010 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D JP39_01955 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D JP39_06830 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D JP39_07265 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D JP39_07055 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D JP39_01900 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D JP39_01885 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D JP39_01930 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D JP39_07045 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D JP39_06910 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D JP39_01915 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D JP39_01965 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D JP39_01685 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D JP39_05355 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D JP39_11820 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D JP39_07270 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D JP39_01990 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D JP39_07745 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_11685 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_10480 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_02855 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_07765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_11695 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_10500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_02845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_07750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_02850 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_10485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_11690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:lhi03009] D JP39_06880 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JP39_05965 era; GTPase Era K03595 era; GTPase D JP39_05330 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D JP39_06595 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D JP39_07030 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D JP39_02440 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D JP39_01595 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D JP39_02465 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D JP39_04865 SAM-dependent methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D JP39_06060 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D JP39_12115 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D JP39_04620 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D JP39_02520 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D JP39_07005 cell division protein FtsJ K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D JP39_01095 rRNA (guanine-N1)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D JP39_02425 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D JP39_00485 rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D JP39_08930 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D JP39_05420 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D JP39_08200 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D JP39_05745 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D JP39_02540 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D JP39_12010 hypothetical protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D JP39_06840 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D JP39_06065 hypothetical protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D JP39_02705 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D JP39_02420 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D JP39_01700 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JP39_02690 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D JP39_07410 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D JP39_06955 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D JP39_05440 engA; GTP-binding protein Der K03977 engA; GTPase D JP39_05535 rbgA; GTPase K14540 rbgA; ribosome biogenesis GTPase A D JP39_11535 GTP-binding protein K03665 hflX; GTPase D JP39_07255 GTPase K06948 yqeH; 30S ribosome assembly GTPase D JP39_06050 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D JP39_06575 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D JP39_06600 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D JP39_11805 RNA-binding protein K14761 rlbA; ribosome-associated protein D JP39_07235 ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D JP39_05975 endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D JP39_07250 RNA-binding protein K07574 yhbY; RNA-binding protein D JP39_08090 Fis family transcriptional regulator K05808 hpf; ribosome hibernation promoting factor D JP39_12135 GTP-binding protein K06942 ychF; ribosome-binding ATPase D JP39_07220 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:lhi03016] D JP39_05340 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D JP39_05485 tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D JP39_06610 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JP39_04685 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JP39_07595 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JP39_01580 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JP39_07450 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JP39_01790 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JP39_06015 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JP39_02695 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JP39_04135 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D JP39_07295 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JP39_09240 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JP39_02415 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JP39_04570 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JP39_06020 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JP39_07175 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JP39_07170 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JP39_04940 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JP39_01500 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JP39_06045 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D JP39_07380 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D JP39_07365 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D JP39_02030 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D JP39_06570 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D JP39_04555 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_04710 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_07110 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D JP39_11835 tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D JP39_11840 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D JP39_11825 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D JP39_12420 bacterial RNase P K01978 rnpB; M1 RNA D JP39_05955 glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JP39_05950 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JP39_02410 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D JP39_06090 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D JP39_11350 prolyl-tRNA synthetase K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D JP39_02475 adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D JP39_01785 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D JP39_06835 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D JP39_05930 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D JP39_08170 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D JP39_07180 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D JP39_04720 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D JP39_02655 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D JP39_11150 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D JP39_02660 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D JP39_04560 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D JP39_01765 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D JP39_02535 peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D JP39_02545 tRNA threonylcarbamoyladenosine biosynthesis protein Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D JP39_03100 ATP/GTP hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D JP39_07225 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D JP39_07830 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C 03012 Translation factors [BR:lhi03012] D JP39_06580 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D JP39_07275 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D JP39_02570 multidrug ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D JP39_06640 elongation factor Ts K02357 tsf; elongation factor Ts D JP39_04915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JP39_01855 fusA; elongation factor G K02355 fusA; elongation factor G D JP39_04410 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D JP39_06630 ribosome-recycling factor K02838 frr; ribosome recycling factor D JP39_04415 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D JP39_01735 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D JP39_01985 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D JP39_07040 elongation factor P K02356 efp; elongation factor P D JP39_08080 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D JP39_08590 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:lhi03110] D JP39_01820 Clp protease ClpX K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D JP39_08485 Clp protease ClpX K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D JP39_03740 Clp protease ClpX K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL D JP39_04925 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D JP39_05565 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D JP39_06545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JP39_02600 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JP39_06540 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D JP39_01780 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D JP39_06550 heat -hock protein GrpE K03687 GRPE; molecular chaperone GrpE D JP39_00665 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D JP39_02595 molecular chaperone GroES K04078 groES; chaperonin GroES D JP39_00480 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D JP39_01775 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D JP39_04430 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JP39_10505 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D JP39_07390 prsA; peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D JP39_02725 thioredoxin K03671 TXN; thioredoxin D JP39_10225 thiol-disulfide isomerase K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:lhi04131] D JP39_03655 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D JP39_07870 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JP39_06300 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JP39_02340 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_09565 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_05385 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JP39_07995 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:lhi03032] D JP39_00815 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JP39_05765 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JP39_05445 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JP39_11815 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JP39_11745 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D JP39_05945 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D JP39_07300 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI D JP39_11775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JP39_05375 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JP39_06605 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D JP39_11810 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JP39_04890 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JP39_02510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JP39_03110 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JP39_02480 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JP39_05540 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D JP39_07325 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JP39_08960 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JP39_11790 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D JP39_11795 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D JP39_05600 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JP39_05595 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JP39_05550 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:lhi03036] D JP39_06880 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JP39_05445 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JP39_11815 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JP39_11180 DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein D JP39_06875 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D JP39_05410 hypothetical protein K05896 scpA; segregation and condensation protein A D JP39_05415 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D JP39_04655 cell division protein FtsA K03590 ftsA; cell division protein FtsA D JP39_01755 hypothetical protein K13052 divIC; cell division protein DivIC D JP39_08160 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D JP39_04625 cell-division protein K03586 ftsL; cell division protein FtsL D JP39_04650 hypothetical protein K03589 ftsQ; cell division protein FtsQ D JP39_04855 cell division protein FtsW K03588 ftsW; cell division protein FtsW D JP39_04660 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JP39_06025 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JP39_04550 selenide, water dikinase K06286 ezrA; septation ring formation regulator D JP39_04600 septum formation initiator K03610 minC; septum site-determining protein MinC D JP39_04605 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D JP39_04680 arabinan synthesis protein K04074 divIVA; cell division initiation protein D JP39_04665 cell division protein SepF K09772 sepF; cell division inhibitor SepF D JP39_04585 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins D JP39_04480 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D JP39_04590 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D JP39_04595 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D JP39_04500 cell division protein FtsW K05837 rodA; rod shape determining protein RodA D JP39_12120 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D JP39_12125 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JP39_05600 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JP39_05595 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JP39_11840 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D JP39_12115 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D JP39_05555 recombinase XerC K03733 xerC; integrase/recombinase XerC D JP39_05400 recombinase XerD K04763 xerD; integrase/recombinase XerD D JP39_04930 GTP-binding protein EngB K03978 engB; GTP-binding protein D JP39_07960 sporulation regulator WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:lhi03400] D JP39_03090 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D JP39_07640 DNA-3-methyladenine glycosidase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D JP39_05805 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JP39_01105 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D JP39_03995 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D JP39_02395 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D JP39_05655 AraC family transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D JP39_05660 cysteine methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D JP39_10065 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D JP39_07320 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D JP39_03115 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D JP39_05995 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D JP39_06515 single-stranded DNA-binding protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JP39_08960 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JP39_07325 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JP39_11845 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D JP39_07985 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D JP39_04275 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D JP39_07990 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D JP39_05265 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D JP39_01495 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_11130 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_11910 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_03485 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_08965 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JP39_01825 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JP39_01830 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JP39_02005 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JP39_01660 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D JP39_06985 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JP39_01740 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D JP39_02635 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D JP39_02720 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D JP39_02640 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D JP39_07020 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D JP39_07015 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D JP39_05375 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JP39_06605 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D JP39_11810 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JP39_04890 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JP39_02510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JP39_03110 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JP39_02480 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JP39_11775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JP39_04735 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D JP39_08125 recombinase RecA K03553 recA; recombination protein RecA D JP39_02645 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D JP39_02650 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D JP39_06980 primosomal protein DnaI K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D JP39_10545 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D JP39_10540 exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 D JP39_02400 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D JP39_11800 recombinase RecF K03629 recF; DNA replication and repair protein RecF D JP39_06895 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JP39_05960 DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D JP39_02490 recombinase K06187 recR; recombination protein RecR D JP39_07000 DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N) D JP39_05795 recU; Holliday junction endonuclease K03700 recU; recombination protein U D JP39_05825 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D JP39_05830 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D JP39_11300 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D JP39_11790 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D JP39_11795 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D JP39_05550 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D JP39_05445 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JP39_05665 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JP39_02680 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D JP39_09355 excinuclease ABC subunit A K03502 umuC; DNA polymerase V D JP39_06730 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D JP39_08660 RecX family transcriptional regulator K03565 recX; regulatory protein D JP39_05820 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D JP39_11620 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JP39_11625 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JP39_02685 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D JP39_11420 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:lhi03029] D JP39_06580 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D JP39_07275 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D JP39_06640 elongation factor Ts K02357 tsf; elongation factor Ts D JP39_04915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JP39_01855 fusA; elongation factor G K02355 fusA; elongation factor G D JP39_05965 era; GTPase Era K03595 era; GTPase D JP39_04940 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JP39_07595 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JP39_06015 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JP39_07450 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JP39_08945 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JP39_08940 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D JP39_08950 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D JP39_11775 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JP39_06545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JP39_06550 heat -hock protein GrpE K03687 GRPE; molecular chaperone GrpE D JP39_02600 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JP39_02595 molecular chaperone GroES K04078 groES; chaperonin GroES D JP39_06540 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D JP39_04555 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_04710 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_11830 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D JP39_07190 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:lhi02000] D JP39_04065 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D JP39_04070 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D JP39_02095 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D JP39_04385 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D JP39_04390 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D JP39_03745 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D JP39_11975 cysteine ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D JP39_11980 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D JP39_01680 multidrug transporter K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D JP39_05495 multidrug ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D JP39_10355 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JP39_10320 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JP39_10325 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JP39_06160 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D JP39_06150 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JP39_06155 hypothetical protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JP39_01300 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein D JP39_01295 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein D JP39_01290 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D JP39_03955 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D JP39_05625 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D JP39_05620 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JP39_05630 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JP39_03950 hypothetical protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JP39_05635 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JP39_09720 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D JP39_03660 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JP39_06345 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JP39_06365 sugar ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein D JP39_06360 ABC transporter permease K25087 musF; maltose transport system permease protein D JP39_06355 sugar ABC transporter permease K25088 musG; maltose transport system permease protein D JP39_03685 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D JP39_03675 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D JP39_03680 sugar ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D JP39_09945 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D JP39_05460 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D JP39_09955 glycerol-3-phosphate ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D JP39_05465 ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D JP39_09950 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D JP39_05470 ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D JP39_09960 glycerol-3-phosphate ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D JP39_05475 sugar ABC transporter ATPase K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D JP39_01555 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D JP39_01550 spermidine/putrescine ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D JP39_02260 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JP39_08065 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JP39_02255 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D JP39_08060 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D JP39_02250 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D JP39_08055 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D JP39_02245 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JP39_08050 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JP39_02195 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JP39_02205 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D JP39_02210 ABC transporter permease K02042 phnE; phosphonate transport system permease protein D JP39_02200 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D JP39_11390 glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D JP39_11380 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D JP39_11385 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D JP39_11395 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D JP39_08615 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D JP39_08620 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D JP39_08625 arginine ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D JP39_06940 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D JP39_03425 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D JP39_03440 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D JP39_03435 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D JP39_03430 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D JP39_12410 peptide ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D JP39_10105 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D JP39_00105 peptide ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D JP39_10100 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D JP39_00100 branched-chain amino acid ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D JP39_10095 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D JP39_00095 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D JP39_01410 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JP39_01420 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D JP39_11540 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D JP39_11545 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D JP39_11550 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D JP39_11555 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D JP39_11560 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D JP39_10445 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JP39_10435 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JP39_10440 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JP39_10425 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D JP39_10430 peptide ABC transporter substrate-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JP39_10665 manganese ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein D JP39_10670 hypothetical protein K19976 mntB; manganese transport system permease protein D JP39_10675 manganese ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D JP39_03825 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D JP39_02025 cobalt ABC transporter ATP-binding protein K16785 ecfT; energy-coupling factor transport system permease protein D JP39_03815 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D JP39_02015 cbiO; cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D JP39_02020 cobalt ABC transporter K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D JP39_03820 hypothetical protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D JP39_12205 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D JP39_10255 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D JP39_12215 ABC transporter K02075 ABC.ZM.P; zinc/manganese transport system permease protein D JP39_10265 ABC transporter K02075 ABC.ZM.P; zinc/manganese transport system permease protein D JP39_12210 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D JP39_10260 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D JP39_00275 multidrug ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein D JP39_00270 hypothetical protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D JP39_07935 GntR family transcriptional regulator K25140 drrB; daunorubicin/doxorubicin transport system permease protein D JP39_07940 ABC transporter ATP-binding protein K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein D JP39_08280 hypothetical protein K11632 bceB; bacitracin transport system permease protein D JP39_08285 multidrug ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D JP39_12100 ABC transporter permease K25149 narB; polyether ionophore transport system permease protein D JP39_12095 ABC transporter K25150 narA; polyether ionophore transport system ATP-binding protein D JP39_08420 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein D JP39_08425 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein D JP39_08430 hypothetical protein K25156 evrA; viologen exporter family transport system ATP-binding protein D JP39_07370 ABC transporter K25157 ecsB; ABC-2 type transport system permease protein D JP39_07375 multidrug ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein D JP39_06850 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_03790 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_08305 antibiotic ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_04015 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_01525 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_01530 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_09930 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_00375 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_06200 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_04975 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D JP39_06855 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_11460 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_11470 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_03785 bacitracin ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_08310 glycosyl transferase family 2 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_04020 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_01535 ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_09935 sodium ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_00380 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_10055 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_06205 3-dehydroquinate dehydratase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_04970 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JP39_06820 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D JP39_11360 permease K02004 ABC.CD.P; putative ABC transport system permease protein D JP39_11400 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D JP39_05890 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D JP39_12075 sulfate ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JP39_00930 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JP39_06825 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JP39_11365 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JP39_11405 bacitracin ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JP39_09995 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JP39_05885 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JP39_00050 iron ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D JP39_03870 diguanylate cyclase K26937 dinF; MATE family, multidrug efflux pump D JP39_01385 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D JP39_06255 antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D JP39_03280 MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein D JP39_08990 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D JP39_01690 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D JP39_05295 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D JP39_10110 MFS sugar transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D JP39_00550 multidrug MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D JP39_10000 multidrug transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D JP39_07995 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D JP39_03990 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D JP39_08475 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D JP39_08480 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D JP39_05650 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_00140 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03560 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_03015 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D JP39_02275 PTS N-acetylglucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D JP39_00250 PTS trehalose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D JP39_08685 PTS sucrose transporter subunit IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D JP39_09510 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_02155 beta-xylosidase K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_03880 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_03020 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_02120 hypothetical protein K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_03550 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_03580 PTS sucrose transporter subunit IIBC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D JP39_00125 PTS alpha-glucoside transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D JP39_00155 PTS sugar transporter subunit IIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D JP39_05245 hypothetical protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D JP39_05240 PTS fructose transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_10895 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_05315 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D JP39_05095 PTS lactose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207] D JP39_05100 PTS lactose transporter subunit IIB K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207] D JP39_03405 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_10880 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_05035 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D JP39_03395 transcription antiterminator K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_03905 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_10890 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_05030 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D JP39_03070 PTS sugar transporter subunit IIA K02761 celB; cellobiose PTS system EIIC component D JP39_03400 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_08900 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_04100 hypothetical protein K02761 celB; cellobiose PTS system EIIC component D JP39_10885 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02761 celB; cellobiose PTS system EIIC component D JP39_00305 PTS cellbiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_10395 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D JP39_05055 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component D JP39_01380 gatC; PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D JP39_11245 PTS sugar transporter subunit IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D JP39_11240 PTS fructose transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204] D JP39_11235 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component D JP39_05275 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component D JP39_02285 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D JP39_04235 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D JP39_00875 PTS sugar transporter K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JP39_02290 PTS mannose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_04225 hypothetical protein K02795 manY; mannose PTS system EIIC component D JP39_00865 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_10795 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D JP39_02295 PTS mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_04230 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_00870 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D JP39_10805 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D JP39_03775 PTS mannnose family transporter subunit IIA K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D JP39_03830 glycerol transporter K02440 glpF; glycerol uptake facilitator D JP39_09920 glycerol uptake permease K02440 glpF; glycerol uptake facilitator D JP39_00195 glycerol uptake permease K02440 glpF; glycerol uptake facilitator D JP39_00200 glycerol transporter K02440 glpF; glycerol uptake facilitator D JP39_06460 ion transporter K10716 kch; voltage-gated potassium channel D JP39_11920 ammonia permease K03320 amt; ammonium transporter, Amt family D JP39_11140 formate-nitrite transporter K21993 fdhC; formate transporter D JP39_07555 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel D JP39_01635 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel D JP39_10525 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel D JP39_08195 magnesium transporter MgtE K06213 mgtE; magnesium transporter D JP39_01075 hypothetical protein K06199 crcB; fluoride exporter D JP39_01080 hypothetical protein K06199 crcB; fluoride exporter D JP39_04055 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D JP39_05260 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D JP39_00520 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D JP39_08595 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D JP39_01060 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D JP39_02610 hypothetical protein K21449 ata; trimeric autotransporter adhesin D JP39_02615 hypothetical protein K21449 ata; trimeric autotransporter adhesin D JP39_06400 hypothetical protein K21449 ata; trimeric autotransporter adhesin D JP39_03165 hypothetical protein K21449 ata; trimeric autotransporter adhesin D JP39_09250 gamma-aminobutyrate permease K11733 lysP; lysine-specific permease D JP39_00405 amino acid permease K16235 mmuP; S-methylmethionine transporter D JP39_07465 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease D JP39_02335 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D JP39_04010 multidrug transporter K03297 emrE; small multidrug resistance pump D JP39_03265 supressor protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D JP39_02345 sugar transporter K05340 glcU; glucose uptake protein D JP39_05615 ribose uptake protein RbsU K06216 rbsU; putative ribose uptake protein D JP39_06765 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D JP39_05155 gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D JP39_04980 lactate permease K03303 lutP; lactate permease D JP39_02585 glutamate:protein symporter K11102 gltP; proton glutamate symport protein D JP39_11375 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D JP39_05455 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D JP39_07975 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D JP39_03125 peptidase K24163 nhaK; monovalent cation/hydrogen antiporter D JP39_00415 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D JP39_11935 sodium:proton antiporter K26730 napA; Na+:H+ antiporter D JP39_00645 uracil permease K02824 uraA; uracil permease D JP39_00610 Uric acid permease PucJ K16169 pbuX; xanthine permease D JP39_09330 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D JP39_03750 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D JP39_05140 nucleoside permease K16323 yxjA; purine nucleoside transport protein D JP39_07845 ATP synthase F0 subunit A K03281 clcA; chloride channel protein, CIC family D JP39_11865 hypothetical protein K03281 clcA; chloride channel protein, CIC family D JP39_07400 manganese transporter K03322 mntH; manganese transport protein D JP39_07510 manganese transporter K03322 mntH; manganese transport protein D JP39_00690 manganese transporter K03322 mntH; manganese transport protein D JP39_09465 manganese transporter K03322 mntH; manganese transport protein D JP39_05190 malate permease K24180 mleP; malate permease and related proteins D JP39_12305 malate transporter K24180 mleP; malate permease and related proteins D JP39_08545 transporter K24180 mleP; malate permease and related proteins D JP39_11915 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D JP39_02370 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D JP39_10570 L-lysine permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D JP39_04035 azaleucine resistance protein AzlC K26605 azlC; branched chain amino acid efflux pump D JP39_04040 branched-chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump D JP39_05425 hypothetical protein K23675 fmnP; riboflavin transporter D JP39_04610 thiamine biosynthesis protein ThiT K16789 thiT; thiamine transporter D JP39_10240 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D JP39_10235 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D JP39_04855 cell division protein FtsW K03588 ftsW; cell division protein FtsW D JP39_07910 malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D JP39_07900 malonate decarboxylase subunit delta K13931 mdcC; malonate decarboxylase delta subunit D JP39_09420 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D JP39_09425 chain-length determining protein K19420 epsA; protein tyrosine kinase modulator D JP39_06420 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D JP39_05250 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:lhi02044] D JP39_04670 cell division protein K02221 yggT; YggT family protein D JP39_04880 hypothetical protein K02237 comEA; competence protein ComEA D JP39_04885 hypothetical protein K02238 comEC; competence protein ComEC D JP39_08100 hypothetical protein K02240 comFA; competence protein ComFA D JP39_08095 competence protein ComF K02242 comFC; competence protein ComFC D JP39_03175 competence protein K02243 comGA; competence protein ComGA D JP39_03180 competence protein ComG K02244 comGB; competence protein ComGB D JP39_03185 competence protein ComGC K02245 comGC; competence protein ComGC D JP39_03190 hypothetical protein K02246 comGD; competence protein ComGD D JP39_01840 hypothetical protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D JP39_08085 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JP39_02435 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JP39_07840 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JP39_01975 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JP39_06860 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JP39_06870 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D JP39_02665 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D JP39_11830 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D JP39_07190 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:lhi02042] D JP39_08595 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D JP39_01060 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D JP39_05510 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:lhi02022] D JP39_08070 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JP39_02265 regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D JP39_08075 PhoP family transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D JP39_00460 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D JP39_00450 PhoP family transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D JP39_08295 hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D JP39_08290 transcriptional regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D JP39_07545 hypothetical protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D JP39_07540 transcriptional regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR D JP39_07205 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D JP39_07210 PhoB family transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D JP39_03595 PhoP family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D JP39_00370 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D JP39_00365 transcriptional regulator K07693 desR; two-component system, NarL family, response regulator DesR D JP39_08360 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_08910 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_11490 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D JP39_11500 LytTR family transcriptional regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_08365 hypothetical protein K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_08915 hypothetical protein K07707 agrA; two-component system, LytTR family, response regulator AgrA D JP39_03700 hypothetical protein K07720 yesN; two-component system, response regulator YesN C 02035 Bacterial motility proteins [BR:lhi02035] D JP39_08615 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:lhi04812] D JP39_04585 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins D JP39_04480 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D JP39_04660 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JP39_04655 cell division protein FtsA K03590 ftsA; cell division protein FtsA D JP39_04600 septum formation initiator K03610 minC; septum site-determining protein MinC D JP39_04605 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D JP39_12120 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D JP39_12125 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:lhi04147] D JP39_07855 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JP39_07870 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JP39_06300 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JP39_07865 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JP39_05385 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JP39_02600 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JP39_06545 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JP39_03630 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JP39_12280 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D JP39_04915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JP39_07380 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D JP39_01730 ldh; lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00840 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_00850 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D JP39_10360 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D JP39_08770 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JP39_01980 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D JP39_06510 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D JP39_10370 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JP39_10375 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JP39_03060 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D JP39_08710 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D JP39_11025 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D JP39_09130 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D JP39_09135 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D JP39_00230 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D JP39_07515 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JP39_06735 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JP39_01375 oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JP39_06670 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JP39_04830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JP39_01285 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D JP39_02675 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JP39_07860 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JP39_02340 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JP39_09565 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:lhi02048] D JP39_11300 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D JP39_11305 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D JP39_11295 hypothetical protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D JP39_10615 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D JP39_10595 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D JP39_10605 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D JP39_04785 cell division protein FtsW K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D JP39_08315 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D JP39_00740 RelB K07473 dinJ; DNA-damage-inducible protein J D JP39_08240 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D JP39_08245 prevent-host-death protein K19159 yefM; antitoxin YefM D JP39_05690 hypothetical protein K19159 yefM; antitoxin YefM D JP39_11215 hypothetical protein K18843 hicB; antitoxin HicB D JP39_04660 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JP39_04585 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins D JP39_04480 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D JP39_05600 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JP39_05595 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JP39_04555 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JP39_04710 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:lhi01504] D JP39_06450 elongation factor G K18220 tetM; ribosomal protection tetracycline resistance protein D JP39_01680 multidrug transporter K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D JP39_10000 multidrug transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D JP39_00770 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D JP39_09555 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D JP39_10915 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D JP39_01250 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D JP39_01255 alanine transporter K03739 dltB; membrane protein involved in D-alanine export D JP39_01260 cytochrome C552 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D JP39_01265 hypothetical protein K03740 dltD; D-alanine transfer protein D JP39_02095 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:lhi03100] D JP39_07755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JP39_10490 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JP39_08880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_02890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07090 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JP39_07740 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JP39_09235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JP39_02915 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JP39_02950 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JP39_02980 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D JP39_02975 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JP39_04190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JP39_09115 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JP39_02935 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JP39_07635 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JP39_04370 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JP39_02920 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JP39_07485 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JP39_01815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JP39_02880 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JP39_02970 tRNA-His K14226 tRNA-His; tRNA His D JP39_02925 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JP39_07760 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JP39_10495 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JP39_01805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_02985 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_02870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_02885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_07580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_09055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JP39_00445 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JP39_02865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JP39_02905 tRNA-Met K14230 tRNA-Met; tRNA Met D JP39_02900 tRNA-Met K14230 tRNA-Met; tRNA Met D JP39_02910 tRNA-Met K14230 tRNA-Met; tRNA Met D JP39_02945 tRNA-Met K14230 tRNA-Met; tRNA Met D JP39_02955 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D JP39_02895 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JP39_02940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JP39_07735 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JP39_02930 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JP39_06505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JP39_02875 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JP39_01455 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JP39_01810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JP39_09230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JP39_02965 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D JP39_02960 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JP39_09120 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JP39_01800 tRNA-Val K14237 tRNA-Val; tRNA Val D JP39_02860 tRNA-Val K14237 tRNA-Val; tRNA Val D JP39_07630 tRNA-Val K14237 tRNA-Val; tRNA Val D JP39_07765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_11695 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_10500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_02845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JP39_07750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_02850 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_10485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_11690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JP39_07745 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_11685 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_10480 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_02855 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JP39_12420 bacterial RNase P K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D JP39_06270 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D JP39_01160 oxidoreductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-] D JP39_06170 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D JP39_04060 lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2] D JP39_01275 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D JP39_03540 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D JP39_04045 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D JP39_10730 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D JP39_00175 hypothetical protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D JP39_06005 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D JP39_06010 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D JP39_00220 haloperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D JP39_09315 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JP39_06425 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D JP39_10145 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D JP39_02835 ferredoxin-NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D JP39_10250 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D JP39_03985 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D JP39_07650 ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D JP39_05935 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D JP39_05780 RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D JP39_07915 acyl transferase K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D JP39_12105 hypothetical protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D JP39_03975 acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D JP39_03840 maltose acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D JP39_10455 galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D JP39_03270 acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D JP39_05165 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D JP39_10410 hypothetical protein K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D JP39_10380 hypothetical protein K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D JP39_07905 triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D JP39_08025 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D JP39_09175 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D JP39_00615 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D JP39_00625 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D JP39_00240 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D JP39_05235 1-phosphofructokinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234] D JP39_06900 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D JP39_05990 phosphotransferase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D JP39_07405 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D JP39_03885 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D JP39_08385 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D JP39_08845 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D JP39_01135 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D JP39_06070 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D JP39_04540 DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D JP39_07890 hypothetical protein K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D JP39_03130 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D JP39_08030 serine kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D JP39_07835 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D JP39_03410 hypothetical protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D JP39_02070 Appr-1-p processing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D JP39_08530 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D JP39_07070 hypothetical protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D JP39_02160 acetyl esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D JP39_00245 esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D JP39_05145 acetyl esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D JP39_10080 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D JP39_00945 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D JP39_09415 tyrosine protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D JP39_07260 haloacid dehalogenase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D JP39_11755 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D JP39_01585 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D JP39_01590 DNA primase K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D JP39_10770 nucleoside 2-deoxyribosyltransferase K22928 DNPH1; 2'-deoxynucleoside 5'-phosphate N-hydrolase [EC:3.2.2.-] D JP39_08380 amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JP39_09595 amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JP39_07195 amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JP39_04805 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D JP39_09455 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D JP39_07895 malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D JP39_09435 phenolic acid decarboxylase padC K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-] D JP39_06810 hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53] D JP39_03215 isomerase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D JP39_04310 hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53] D JP39_07585 hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D JP39_12245 fructotransferase K25596 E4.2.1.178; difructose-dianhydride-III synthase [EC:4.2.1.178] D JP39_09825 4-aminobutyrate aminotransferase K20708 E5.1.1.21; isoleucine 2-epimerase [EC:5.1.1.21] D JP39_10020 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12] D JP39_08325 ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D JP39_11035 metal ABC transporter ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D JP39_05685 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D JP39_11190 HAD family hydrolase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D JP39_09335 zinc ABC transporter ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D JP39_01025 cation transporter K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D JP39_00065 FeS assembly scaffold SufA K04488 iscU; nitrogen fixation protein NifU and related proteins D JP39_11315 flavodoxin K03839 fldA; flavodoxin I D JP39_01280 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D JP39_05720 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit D JP39_05515 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit D JP39_08705 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit D JP39_01185 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D JP39_11615 ribonucleotide reductase K03647 nrdI; protein involved in ribonucleotide reduction D JP39_11285 2-hydroxyacid dehydrogenase K15051 endA; DNA-entry nuclease D JP39_04285 DNA-entry nuclease K15051 endA; DNA-entry nuclease D JP39_04025 DNA-entry nuclease K15051 endA; DNA-entry nuclease C 99985 Amino acid metabolism C 99986 Glycan metabolism D JP39_07775 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D JP39_05405 RibT protein K02859 ribT; riboflavin biosynthesis RibT protein C 99988 Secondary metabolism D JP39_03525 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D JP39_12290 cold-shock protein K03704 cspA; cold shock protein D JP39_04690 DNA-binding protein K03704 cspA; cold shock protein D JP39_08995 cold-shock protein K03704 cspA; cold shock protein D JP39_08265 ArsR family transcriptional regulator K16509 spxA; regulatory protein spx D JP39_10530 hypothetical protein K06959 tex; protein Tex C 99974 Translation D JP39_02840 hypothetical protein K07570 GSP13; general stress protein 13 D JP39_01760 RNA-binding protein K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D JP39_04920 tig; trigger factor K03545 tig; trigger factor D JP39_07825 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein D JP39_11610 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D JP39_08250 competence negative regulator MecA K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D JP39_04580 hypothetical protein K03630 radC; DNA repair protein RadC D JP39_00760 endonuclease III K07457 K07457; endonuclease III related protein D JP39_06650 hypothetical protein K07461 K07461; putative endonuclease D JP39_05545 DNA processing protein K04096 smf; DNA processing protein D JP39_05810 DNA replication protein DnaD K02086 dnaD; DNA replication protein D JP39_04525 recombinase RarA K07478 ycaJ; putative ATPase D JP39_11575 AAA family ATPase K07478 ycaJ; putative ATPase D JP39_01605 transposase K07482 K07482; transposase, IS30 family D JP39_07625 transposase K07482 K07482; transposase, IS30 family D JP39_01795 transposase K07486 K07486; transposase D JP39_03050 transposase K07486 K07486; transposase D JP39_00455 transposase K07486 K07486; transposase D JP39_05170 transposase K07486 K07486; transposase D JP39_11060 transposase K07491 rayT; REP-associated tyrosine transposase D JP39_09745 transposase K07491 rayT; REP-associated tyrosine transposase D JP39_08045 transposase K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D JP39_02485 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D JP39_12325 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family D JP39_00035 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family D JP39_12295 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D JP39_08895 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D JP39_09820 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D JP39_09125 peptide ABC transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D JP39_03725 branched-chain amino acid transporter II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D JP39_08580 branched-chain amino acid transporter II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D JP39_01200 cytochrome C oxidase subunit III K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D JP39_12160 2-oxoglutarate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D JP39_04850 GTP-binding protein TypA K06207 typA; GTP-binding protein D JP39_02550 hypothetical protein K07166 K07166; ACT domain-containing protein D JP39_05980 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D JP39_11370 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D JP39_08190 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D JP39_09650 hypothetical protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D JP39_11850 oxidoreductase K03810 mviM; virulence factor D JP39_12110 GCN5 family acetyltransferase K02348 elaA; ElaA protein D JP39_01325 GNAT family acetyltransferase K02348 elaA; ElaA protein D JP39_08220 hypothetical protein K06198 coiA; competence protein CoiA D JP39_07350 tRNA-binding protein K06878 K06878; tRNA-binding protein D JP39_08455 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily D JP39_00070 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D JP39_00055 ABC transporter K09015 sufD; Fe-S cluster assembly protein SufD D JP39_10845 hydrolase K07048 PTER; phosphotriesterase-related protein D JP39_08785 ribonuclease K07058 K07058; membrane protein D JP39_07730 3-demethylubiquinone-9 3-methyltransferase K04750 phnB; PhnB protein D JP39_04295 hypothetical protein K03744 lemA; LemA protein D JP39_09060 protein SprT-like protein K03095 sprL; SprT-like protein D JP39_02830 hypothetical protein K03975 dedA; membrane-associated protein D JP39_08560 hypothetical protein K01421 yhgE; putative membrane protein D JP39_00805 phage infection protein K01421 yhgE; putative membrane protein D JP39_08035 hypothetical protein K08972 K08972; putative membrane protein D JP39_02565 hypothetical protein K08974 K08974; putative membrane protein D JP39_09015 hypothetical protein K08981 K08981; putative membrane protein D JP39_08725 hypothetical protein K08982 K08982; putative membrane protein D JP39_12265 hypothetical protein K08987 K08987; putative membrane protein D JP39_11565 hypothetical protein K08996 yagU; putative membrane protein C 99997 Function unknown D JP39_01645 hypothetical protein K06885 K06885; uncharacterized protein D JP39_11665 alpha/beta hydrolase K06889 K06889; uncharacterized protein D JP39_06415 alpha/beta hydrolase K06889 K06889; uncharacterized protein D JP39_09865 esterase K06889 K06889; uncharacterized protein D JP39_10745 alpha/beta hydrolase K06889 K06889; uncharacterized protein D JP39_10645 hypothetical protein K06890 K06890; uncharacterized protein D JP39_06430 phosphohydrolase K06950 K06950; uncharacterized protein D JP39_00795 peptidase K06973 K06973; uncharacterized protein D JP39_02390 acetyltransferase K06975 K06975; uncharacterized protein D JP39_11655 permease K07090 K07090; uncharacterized protein D JP39_04250 hypothetical protein K07090 K07090; uncharacterized protein D JP39_06240 permease K07090 K07090; uncharacterized protein D JP39_06755 hypothetical protein K07118 K07118; uncharacterized protein D JP39_11320 hypothetical protein K07118 K07118; uncharacterized protein D JP39_05345 short-chain dehydrogenase K07124 K07124; uncharacterized protein D JP39_10695 nucleoside triphosphate hydrolase K07133 K07133; uncharacterized protein D JP39_02625 hypothetical protein K07150 K07150; uncharacterized protein D JP39_04490 hypothetical protein K08998 K08998; uncharacterized protein D JP39_02555 hypothetical protein K09157 K09157; uncharacterized protein D JP39_09020 hypothetical protein K09167 K09167; uncharacterized protein D JP39_05895 DNA replication initiation protein K09384 K09384; uncharacterized protein D JP39_00965 ATP-dependent exonuclease K09384 K09384; uncharacterized protein D JP39_03650 glycosyl hydrolase K09704 K09704; uncharacterized protein D JP39_06865 DNA-binding protein K09787 K09787; uncharacterized protein D JP39_05395 DNA-binding protein K00243 K00243; uncharacterized protein D JP39_12065 hypothetical protein K09861 K09861; uncharacterized protein D JP39_00255 hypothetical protein K09963 K09963; uncharacterized protein D JP39_00315 PTS-associated protein K09963 K09963; uncharacterized protein D JP39_05060 hypothetical protein K09963 K09963; uncharacterized protein D JP39_06720 hypothetical protein K09976 K09976; uncharacterized protein D JP39_07050 ribosomal protein K07584 ysxB; uncharacterized protein D JP39_08655 hypothetical protein K07586 ygaC; uncharacterized protein D JP39_06590 DNA-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 9, 2024