+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Linepithema humile (Argentine ant)

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E 105676793 mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 105668344 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E 105677554 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] E 105673251 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 isoform X1 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] E 105674236 RNMT-activating mini protein K18708 FAM103A1; RNMT-activating mini protein D Cap binding complex E 105679795 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1 E 105679750 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E 105675606 cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E 105673114 cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E 105677442 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E 105670161 uncharacterized protein LOC105670161 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E 105675541 cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E 105678785 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 105676330 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E 105668404 pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E 105671449 pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2 E 105669480 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2 E 105671447 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 105667319 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 105671483 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E 105671194 cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1 E 105668995 cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 105671818 protein suppressor of forked K14408 CSTF3; cleavage stimulation factor subunit 3 E 105676181 symplekin K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E 105674272 small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B' E 105674035 small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 105676480 probable small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E E 105676495 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F E 105672467 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G E 105669064 U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 E 105670560 U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 E 105678785 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 105668995 cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 105676181 symplekin K06100 SYMPK; symplekin E 105672459 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein D DRB sensitivity inducing factor (DSIF) complex E 105673348 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4 E 105673334 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E 105675085 N6-adenosine-methyltransferase subunit METTL3 K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E 105670176 methyltransferase-like protein 14 homolog isoform X1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E 105674951 methyltransferase-like protein 4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] E 105670136 methyltransferase-like protein 16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E 105673696 pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP E 105670573 LOW QUALITY PROTEIN: protein virilizer K22910 VIRMA; protein virilizer E 105672026 putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15 E 105677064 zinc finger CCCH domain-containing protein 13 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 105673215 zinc finger CCCH domain-containing protein 13-like isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 105675350 zinc finger CCCH domain-containing protein 13 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 105675858 uncharacterized protein CG7065-like K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 105676704 E3 ubiquitin-protein ligase Hakai-like isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] D Poly(A) addition factors E 105667861 poly(A) polymerase type 3 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 105674129 poly(A) RNA polymerase gld-2 homolog A-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] E 105668007 LOW QUALITY PROTEIN: speckle targeted PIP5K1A-regulated poly(A) polymerase-like K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] D Negative regulators of mRNA 3' end processing E 105671301 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1 E 105671565 RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26 E 105674332 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43 E 105674402 LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43 C Other processing factors D 105675279 DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17 D 105677514 methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D 105673872 protein FAM46C-like isoform X1 K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] D 105677980 zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D 105673814 serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E 105678949 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A E 105673262 protein mago nashi homolog K12877 MAGOH; protein mago nashi E 105677900 THO complex subunit 4 K12881 THOC4; THO complex subunit 4 E 105677870 ATP-dependent RNA helicase WM6 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E 105679803 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 105679117 coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174 E 105671538 protein CASC3 isoform X1 K14323 CASC3; protein CASC3 E 105676556 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18 E 105669166 pinin K13114 PNN; pinin E 105670549 apoptotic chromatin condensation inducer in the nucleus K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus E 105671022 RNA-binding protein with serine-rich domain 1-B-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E 105667984 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E 105674727 THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1 E 105671438 THO complex subunit 2 isoform X1 K12879 THOC2; THO complex subunit 2 E 105673195 THO complex subunit 3 K12880 THOC3; THO complex subunit 3 E 105677900 THO complex subunit 4 K12881 THOC4; THO complex subunit 4 E 105670646 THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5 E 105667558 THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6 E 105670488 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7 D TREX-2 complex E 105667971 PCI domain-containing protein 2 K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E 105677760 26S proteasome complex subunit DSS1 K10881 SHFM1; 26 proteasome complex subunit DSS1 E 105674478 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor D Nuclear pore complex E 105673804 LOW QUALITY PROTEIN: nucleoprotein TPR K09291 TPR; nucleoprotein TPR E 105669574 mRNA export factor K14298 RAE1; mRNA export factor E 105673805 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13 E 105677522 nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37 E 105678855 nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85 E 105673397 nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50 E 105673333 nuclear pore complex protein Nup54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54 E 105668528 nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62 E 105676599 LOW QUALITY PROTEIN: nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88 E 105679632 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93 E 105669374 nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 105676350 nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107 E 105678636 nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133 E 105675128 LOW QUALITY PROTEIN: nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188 E 105678042 nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153 E 105675280 nuclear pore complex protein Nup155 K14312 NUP155; nuclear pore complex protein Nup155 E 105668967 nuclear pore complex protein Nup160 homolog K14303 NUP160; nuclear pore complex protein Nup160 E 105671976 nucleoporin NUP53 K14313 NUP35; nuclear pore complex protein Nup53 E 105674137 nuclear pore complex protein Nup205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205 E 105667945 nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210 E 105677570 nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214 E 105679143 LOW QUALITY PROTEIN: nucleoporin p58/p45 K14307 NUPL1; nucleoporin p58/p45 E 105673681 nucleoporin NDC1 K14315 NDC1; nucleoporin NDC1 E 105672923 nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1 E 105669823 RANBP2-like and GRIP domain-containing protein 5/6 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] E 105671617 aladin K14320 AAAS; aladin E 105670256 nucleoporin-like protein 2 K18716 NUP42; nucleoporin NUP42 E 105679163 nucleoporin GLE1 K18723 GLE1; nucleoporin GLE1 E 105679875 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor E 105679408 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor E 105668959 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 105670025 NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2 D Ran-mediated transport factors E 105673799 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran E 105678980 acidic leucine-rich nuclear phosphoprotein 32 family member A K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D E 105675138 ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 105674359 FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2 E 105677015 transitional endoplasmic reticulum ATPase TER94 K13525 VCP; transitional endoplasmic reticulum ATPase E 105673591 LOW QUALITY PROTEIN: exportin-1 K14290 XPO1; exportin-1 E 105672517 exportin-7 isoform X1 K18460 XPO7; exportin-7 E 105675885 ran GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E 105676427 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E E 105677649 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E E 105678874 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A E 105673510 eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G E 105679706 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 105677724 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B E 105671550 eukaryotic translation initiation factor 4H isoform X1 K24086 EIF4H; translation initiation factor 4H E 105678562 eukaryotic translation initiation factor 4E-binding protein 2 isoform X1 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 E 105679066 myb-like protein Q isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 105671982 protein angel isoform X1 K18729 ANGEL; protein angel E 105674469 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein E 105673203 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E 105677520 gem-associated protein 5 K13133 GEMIN5; gem associated protein 5 E 105671097 LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 105671099 cytoplasmic polyadenylation element-binding protein 1-B isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 105677322 ATP-dependent RNA helicase bel K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 105667628 PERQ amino acid-rich with GYF domain-containing protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 105677573 LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein E 105667428 polyadenylate-binding protein-interacting protein 1-like K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 E 105672508 polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 E 105673731 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 105671409 deformed epidermal autoregulatory factor 1 isoform X1 K23041 DEAF1; deformed epidermal autoregulatory factor 1 E 105670235 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence E 105668328 density-regulated protein homolog K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E 105675298 partner of Y14 and mago isoform X1 K14294 WIBG; partner of Y14 and mago E 105670570 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 105670561 RNA-binding protein Musashi homolog Rbp6 isoform X1 K14411 MSI; RNA-binding protein Musashi E 105672415 RNA-binding protein Musashi homolog Rbp6 K14411 MSI; RNA-binding protein Musashi E 105675905 heterogeneous nuclear ribonucleoprotein 27C isoform X1 K14411 MSI; RNA-binding protein Musashi E 105678634 HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein E 105668535 polyadenylate-binding protein 2-B K14396 PABPN1; polyadenylate-binding protein 2 E 105672774 DEAD-box helicase Dbp80 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E 105674004 pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1 E 105675191 regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation E 105670087 uncharacterized protein LOC105670087 K18733 LARP6; la-related protein 6 E 105679744 transcriptional activator protein Pur-beta isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha E 105673271 uncharacterized protein LOC105673271 K22414 POLDIP3; polymerase delta-interacting protein 3 E 105676107 zinc finger CCCH domain-containing protein 11A-like isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 E 105668796 leukocyte receptor cluster member 8 homolog isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E 105675514 eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1 E 105668981 eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3 E 105674128 regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 105668860 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 105677512 regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E 105668142 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 105670073 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E 105674470 protein phosphatase PP2A 55 kDa regulatory subunit isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 105671489 uncharacterized protein LOC105671489 isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 105672850 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 105676496 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E 105670372 serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 105677059 protein SMG5 K11125 SMG5; protein SMG5 E 105677916 telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 105675696 protein SMG7-like K14409 SMG7; protein SMG7 E 105671388 protein SMG8 isoform X1 K18734 SMG8; protein SMG8 E 105669376 protein SMG9 isoform X1 K18735 SMG9; protein SMG9 E 105667628 PERQ amino acid-rich with GYF domain-containing protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 105674254 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E 105674978 GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E 105678780 protein penguin K14844 PUF6; pumilio homology domain family member 6 E 105679451 unconventional myosin-Va K10357 MYO5; myosin V E 105669528 protein bicaudal D isoform X1 K18739 BICD; protein bicaudal D E 105677926 uncharacterized protein LOC105677926 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals E 105667510 actin-5C K05692 ACTB_G1; actin beta/gamma 1 E 105677456 T-box transcription factor TBX3-like K10180 TBX6; T-box protein 6 E 105671145 protein nanos isoform X1 K18741 NANOS1; protein nanos 1 E 105676478 uncharacterized protein LOC105676478 K18742 OSK; maternal effect protein oskar E 105670993 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 105670997 enhancer of split mgamma protein-like isoform X1 K09090 HESN; hairy and enhancer of split, invertebrate E 105670142 transcription factor HES-1-A K09090 HESN; hairy and enhancer of split, invertebrate E 105679459 enhancer of split m7 protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 105672684 protein hairy K09090 HESN; hairy and enhancer of split, invertebrate D Trans-acting binding proteins E 105670064 far upstream element-binding protein 1-like isoform X1 K13210 FUBP; far upstream element-binding protein E 105678714 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 105676698 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 105675115 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma E 105673987 uncharacterized protein LOC105673987 isoform X1 K16220 HAX1; HCLS1-associated protein X-1 E 105667936 arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 E 105674692 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 105678414 polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1 E 105677047 RNA-binding protein squid isoform X1 K03102 SQD; squid E 105672713 RNA-binding protein squid isoform X1 K03102 SQD; squid E 105672913 RNA-binding protein squid-like K03102 SQD; squid E 105671097 LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 105671099 cytoplasmic polyadenylation element-binding protein 1-B isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E 105674469 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein E 105673203 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E 105668221 poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 105673408 caprin homolog K18743 CAPRIN1; caprin-1 E 105676039 CUGBP Elav-like family member 2 isoform X1 K02177 BRU; bruno E 105670392 maternal protein exuperantia K18745 EXU; maternal protein exuperantia E 105678745 nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1 C mRNA cycle factors D Common to processing body (P body) and stress granule E 105674583 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 105669925 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 105677214 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 105676427 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E E 105677649 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E E 105674128 regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 105677322 ATP-dependent RNA helicase bel K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 105670012 LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 105678350 RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] E 105677525 protein LSM14 homolog A K18749 LSM14; protein LSM14 E 105678745 nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1 E 105676521 LIM domain-containing protein jub isoform X1 K16682 AJUBA; LIM domain-containing protein E 105677380 LOW QUALITY PROTEIN: putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] E 105680096 transportin-1 isoform X1 K18752 TNPO1; transportin-1 E 105670372 serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 105677059 protein SMG5 K11125 SMG5; protein SMG5 E 105677916 telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 105675696 protein SMG7-like K14409 SMG7; protein SMG7 E 105669901 protein TIS11 K15308 TTP; tristetraprolin E 105673384 huntingtin K04533 HD; huntingtin E 105670177 LOW QUALITY PROTEIN: protein bicaudal C K18756 BICC1; protein bicaudal C E 105670570 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 105670768 cAMP-dependent protein kinase catalytic subunit K04345 PKA; protein kinase A [EC:2.7.11.11] E 105679159 cAMP-dependent protein kinase catalytic subunit beta-like K04345 PKA; protein kinase A [EC:2.7.11.11] E 105674226 la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1 E 105671435 ataxin-2 homolog K23625 ATXN2_2L; ataxin 2/2L D P-body specific factors E 105671104 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 105672796 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 105667822 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 105676625 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 105673106 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 105677865 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 105673507 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 105676206 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 105671212 U6 snRNA-associated Sm-like protein LSm7 isoform X1 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 105672468 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E 105667762 kinesin light chain isoform X1 K10407 KLC; kinesin light chain E 105679451 unconventional myosin-Va K10357 MYO5; myosin V E 105670363 tubulin alpha-1 chain K07374 TUBA; tubulin alpha E 105672974 tubulin alpha chain, testis-specific-like K07374 TUBA; tubulin alpha E 105674411 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 105672180 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 105672440 tubulin alpha chain-like K07374 TUBA; tubulin alpha E 105675673 tubulin alpha-2/alpha-4 chain-like K07374 TUBA; tubulin alpha E 105679495 tubulin alpha-1 chain-like isoform X1 K07374 TUBA; tubulin alpha E 105671097 LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 105671099 cytoplasmic polyadenylation element-binding protein 1-B isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 105677520 gem-associated protein 5 K13133 GEMIN5; gem associated protein 5 E 105675985 trinucleotide repeat-containing gene 6C protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein E 105667492 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 105671343 CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 105680011 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 105679638 uncharacterized protein LOC105679638 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 105678472 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 105668504 CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 105674753 DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 105674754 LOW QUALITY PROTEIN: DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 105674767 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 105670986 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 105675845 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E 105679197 protein BTG3-like K14443 TOB; protein Tob/BTG E 105679089 protein Tob1-like K14443 TOB; protein Tob/BTG E 105679104 protein BTG2-like K14443 TOB; protein Tob/BTG E 105679066 myb-like protein Q isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 105676542 protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 105670907 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 105671030 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 105668860 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 105677512 regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3 E 105677684 E3 ubiquitin-protein ligase TRIM71 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 105674874 LOW QUALITY PROTEIN: uncharacterized protein LOC105674874 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 105668409 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E 105677567 YTH domain-containing family protein 3-like isoform X1 K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E 105674649 nucleolysin TIAR K13201 TIA1; nucleolysin TIA-1/TIAR E 105676868 nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 105677573 LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein E 105674692 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 105674469 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein E 105678957 ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 105671008 eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A E 105667978 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B E 105678874 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A E 105679803 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 105677724 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B E 105673510 eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G E 105679706 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 105674206 ribosomal protein S6 kinase 2 beta K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E 105677605 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 105679875 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor E 105679408 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor E 105668959 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 105670581 histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] E 105669587 tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3 E 105673123 la-related protein CG11505 isoform X1 K18763 LARP4; la-related protein 4 B mRNA degradation factors C 5'-3' decay D Decapping complex E 105672796 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 105671104 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 105670012 LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 105670907 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 105671030 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 105676542 protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E 105667822 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 105676625 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 105673106 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 105677865 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 105673507 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 105676206 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 105671212 U6 snRNA-associated Sm-like protein LSm7 isoform X1 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 105672468 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E 105674583 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 105677838 5'-3' exoribonuclease 2 homolog isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Other 5'-3' decay factors E 105678394 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 105670344 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] C 3'-5' decay D Core exosome factors E 105668413 uncharacterized protein LOC105668413 K03679 RRP4; exosome complex component RRP4 E 105667564 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40 E 105677774 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41 E 105668716 exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46 E 105669948 exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3 E 105671657 exosome complex exonuclease RRP42 K12589 RRP42; exosome complex component RRP42 E 105673624 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43 E 105668454 exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E 105671238 exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E 105673102 nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1 E 105673541 M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type D TRAMP complex E 105671425 non-canonical poly(A) RNA polymerase PAPD5-like isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E 105678548 uncharacterized protein LOC105678548 isoform X1 K12597 AIR1_2; protein AIR1/2 E 105671997 superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E 105673731 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 105668789 tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3 E 105675022 WD repeat-containing protein 61 K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E 105678472 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 105667492 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 105671343 CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 105680011 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 105679638 uncharacterized protein LOC105679638 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 105668504 CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 105678883 cell differentiation protein RCD1 homolog K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 105667696 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10 D Pan complex E 105670986 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 105675845 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E 105675342 poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 105674636 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 105673936 LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 105679197 protein BTG3-like K14443 TOB; protein Tob/BTG E 105679089 protein Tob1-like K14443 TOB; protein Tob/BTG E 105679104 protein BTG2-like K14443 TOB; protein Tob/BTG E 105678394 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 105673497 2',5'-phosphodiesterase 12 isoform X1 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E 105670344 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] E 105670221 LOW QUALITY PROTEIN: protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2 E 105676543 protein Smaug homolog 1 isoform X1 K27396 SMG; protein Smaug E 105672019 focadhesin K27498 FOCAD; focadhesin C Other degradation factors D RNases E 105673247 probable ribonuclease ZC3H12D isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] E 105667561 uncharacterized protein LOC105667561 isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E 105668156 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] E 105676746 probable oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] E 105675945 probable oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E 105679546 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 105672653 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 105670521 polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E 105669537 ATP-dependent 6-phosphofructokinase isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E 105676866 heat shock 70 kDa protein cognate 5 K04043 dnaK; molecular chaperone DnaK E 105672773 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E 105668413 uncharacterized protein LOC105668413 K03679 RRP4; exosome complex component RRP4 D Cofactors E 105677774 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41 E 105671657 exosome complex exonuclease RRP42 K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024