+D GENES KO
#
KEGG Orthology (KO) - Listeria innocua (serotype 6a)
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lin00010]
D lin1376 similar to glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D pgi glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D lin1606 lin1606 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D fbp highly similar to fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D lin2238 similar to fructose-1,6-biphosphate aldolase type II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin0378 similar to D-fructose-1,6-biphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin2239 similar to fructose-1,6-biphosphate aldolase type II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin0364 similar to triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D tpi highly similar to triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D gap highly similar to glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D pgk highly similar to phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D lin2308 similar to phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D pgm highly similar to phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D eno highly similar to enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D pykA highly similar to pyruvate kinases K00873 PK; pyruvate kinase [EC:2.7.1.40]
D lin1981 similar to pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D pdhA highly similar to pyruvate dehydrogenase (E1 alpha subunit) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PdhB highly similar to pyruvate dehydrogenase (E1 beta subunit) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D pdhC highly similar to pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D nifJ highly similar to pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ldh similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1775 similar to L-lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1569 similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1675 similar to Alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D lin2868 similar to acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D lin2619 similar to aldose 1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D lin2618 similar to phosphomannomutase and phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D lin0526 similar to 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0540 similar to 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0297 highly similar to phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0288 similar to phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin2904 similar to beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0583 similar to beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0017 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0918 similar to beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0344 similar to phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin1016 similar to phosphotransferase system glucose-specific enzyme IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:lin00020]
D citZ highly similar to citrate synthase subunit II K01647 CS; citrate synthase [EC:2.3.3.1]
D citB highly similar to aconitate hydratases K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D citC highly similar to isocitrate dehyrogenases K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D citG similar to fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D pycA highly similar to pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D pdhA highly similar to pyruvate dehydrogenase (E1 alpha subunit) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PdhB highly similar to pyruvate dehydrogenase (E1 beta subunit) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D pdhC highly similar to pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D nifJ highly similar to pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:lin00030]
D pgi glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D lin2085 similar to glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D lin0567 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D lin1413 similar to 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D lin1932 similar to ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin0499 similar to ribulose-5-phosphate 3 epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin0505 similar to ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin2808 similar to ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin2810 similar to ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin0360 similar to transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D tkt highly similar to transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D lin2809 similar to transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D lin2886 similar to transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D lin0361 similar to transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D lin0974 similar to ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D lin0498 similar to ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D lin2811 similar to ribose 5-phosphate epimerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D lin2821 similar to ribose 5-phosphate epimerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D lin0363 similar to sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D dra similar to deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D drm similar to phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D lin2618 similar to phosphomannomutase and phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D prs.1 phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D prs.2 similar to phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D lin2860 highly similar to gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D lin2238 similar to fructose-1,6-biphosphate aldolase type II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin0378 similar to D-fructose-1,6-biphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin2239 similar to fructose-1,6-biphosphate aldolase type II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D fbp highly similar to fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D lin1606 lin1606 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:lin00040]
D lin1070 similar to putative UDP-glucose pyrophosphorylases K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D lin1932 similar to ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin0499 similar to ribulose-5-phosphate 3 epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin0505 similar to ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin2808 similar to ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin2810 similar to ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D lin2981 similar to rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D lin2979 highly similar to rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D lin0506 similar to polyol (sorbitol) dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D lin2812 similar to polyol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D lin2813 similar to sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D lin1072 similar to glucitol dehydrogenase K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D lin1071 similar to CDP-ribitol pyrophosphorylase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
D lin2198 similar to L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:lin00051]
D lin0809 similar to fructokinases K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D lin2215 similar to mannnose-6 phospate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D lin0858 similar to phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D lin2198 similar to L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D lin2980 highly similar to L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D lin2981 similar to rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D lin2979 highly similar to rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D lin1606 lin1606 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D fbp highly similar to fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D lin2199 similar to 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D fruB fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D lin0506 similar to polyol (sorbitol) dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D lin2812 similar to polyol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D lin2813 similar to sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D lin2238 similar to fructose-1,6-biphosphate aldolase type II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin0378 similar to D-fructose-1,6-biphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin2239 similar to fructose-1,6-biphosphate aldolase type II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin0364 similar to triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D tpi highly similar to triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D lin0498 similar to ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D lin2811 similar to ribose 5-phosphate epimerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D lin2821 similar to ribose 5-phosphate epimerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D lin0363 similar to sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D lin0446 similar to PTS fructose-specific enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin2242 similar to PTS system, fructose-specific enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin0376 similar to PTS system, enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin0421 similar to phosphotransferase system enzyme IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin0422 similar to fructose-specific phosphotransferase enzyme IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D lin2241 similar to PTS system, fructose-specific enzyme IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D lin0423 similar to fructose-specific phosphotransferase enzyme IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin0448 similar to PTS fructose-specific enzyme IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D fruA highly similar to phosphotransferase system (PTS) fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin2240 similar to PTS system, fructose-specific enzyme IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin0377 similar to PTS system, fructose-specific enzyme IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin2105 similar to PTS mannose-specific enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0777 similar to mannose-specific phosphotransferase system (PTS) component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0020 similar to PTS system, fructose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0143 similar to PTS system mannose-specific, factor IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D lin0775 similar to mannose-specific phosphotransferase system (PTS) component IIC K02795 manY; mannose PTS system EIIC component
D lin0144 similar to PTS system mannose-specific, factor IIC K02795 manY; mannose PTS system EIIC component
D lin0022 similar to PTS system, fructose-specific IIC component K02795 manY; mannose PTS system EIIC component
D lin0774 similar to mannose-specific phosphotransferase system (PTS) component IID K02796 manZ; mannose PTS system EIID component
D lin0145 similar to PTS system mannose-specific, factor IID K02796 manZ; mannose PTS system EIID component
D lin0023 similar to PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D lin2929 similar to phosphotransferase system mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D lin2931 similar to phosphotransferase system mannitol-specific enzyme IIBC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D lin0546 similar to PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D lin0547 similar to PTS system, glucitol/sorbitol-specific enzyme IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D lin0548 similar to PTS system, glucitol/sorbitol-specific enzyme II CII component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:lin00052]
D lin2619 similar to aldose 1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D galE UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D lin1070 similar to putative UDP-glucose pyrophosphorylases K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D lin2618 similar to phosphomannomutase and phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D lin1376 similar to glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D lin2202 similar to PTS system galactitol-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin2816 similar to PTS system galactitol-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin0503 similar to PTS fructose-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin2815 similar to PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin0507 similar to PTS system, Galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin2201 similar to PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin2814 similar to PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D lin0508 similar to PTS system, Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D lin2200 similar to PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D lin1606 lin1606 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D lin0543 similar to tagatose-1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D lin0222 similar to alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D lin0223 similar to oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism
D lin2800 similar to mannitol-specific PTS enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D lin2799 similar to hypothetical PTS enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D lin2798 similar to hypothetical PTS enzyme IIC component K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:lin00500]
D lin0222 similar to alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D lin1070 similar to putative UDP-glucose pyrophosphorylases K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D lin1840 similar to beta-glucosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D lin0391 similar to beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D lin2457 similar to PTS system, cellobiose-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2360 similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0329 similar to PTS beta-glucoside-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0872 similar to PTS system enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0917 similar to phosphotransferase system enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin1830 similar to phosphotransferase system (PTS) lichenan-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2908 similar to PTS cellobiose-specific enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2833 similar to cellobiose phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2472 similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2458 similar to PTS system, cellobiose-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0327 similar to PTS beta-glucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0393 similar to PTS betaglucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0873 similar to PTS system, beta-glucoside enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0914 similar to PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin1080 similar to PTS system, cellobiose-specific IIB component (cel A) K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin1831 similar to phosphotransferase system (PTS) lichenan-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2905 similar to PTS cellobiose-specific enzyme IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2831 similar to cellobiose phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0326 similar to PTS beta-glucoside-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0392 similar to PTS betaglucoside-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0874 similar to PTS system, Lichenan-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0900 similar to PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0915 similar to phosphotransferase system enzyme IIC (truncated, N-terminal end) K02761 celB; cellobiose PTS system EIIC component
D lin2459 similar to PTS system, cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin2832 similar to cellobiose phosphotransferase enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin2856 similar to PTS system, cellobiose-specific enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D lin2906 similar to PTS cellobiose-specific enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D lin0033 similar to PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0526 similar to 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0540 similar to 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0297 highly similar to phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0288 similar to phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin2904 similar to beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0583 similar to beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0017 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0918 similar to beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin0344 similar to phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D lin2231 similar to maltogenic amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D lin0223 similar to oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D lin2226 similar to maltosephosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D lin2964 similar to phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D lin1016 similar to phosphotransferase system glucose-specific enzyme IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D lin2454 similar to 6-phospho-beta-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D lin1223 similar to PTS system trehalose specific enzyme IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D lin0855 similar to oligo-1,6-glucosidase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D lin1222 similar to alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D lin2618 similar to phosphomannomutase and phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D lin1376 similar to glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D pgi glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D lin0809 similar to fructokinases K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lin00520]
D lin0153 highly similar to chitinase B K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D lin1996 similar to chitinases K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D lin1016 similar to phosphotransferase system glucose-specific enzyme IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D lin2213 similar to N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D lin0955 similar to N-acetylglucosamine-6P-phosphate deacetylase (EC 3.5.1.25) K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D lin0956 similar to glucosamine-6-Phoasphate isomerase (EC 5.3.1.10) K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D lin2452 similar to N-acetylglucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D lin0809 similar to fructokinases K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D lin0734 similar to L-glutamine-D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D lin2223 similar to phosphoglucomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D gcaD highly similar to UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D murZ highly similar to UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D lin1459 weakly similar to UDP-N-acetylglucosaminyl-3-enolpyruvate reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D lin2933 similar to a putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D lin2681 similar to UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D lin1376 similar to glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D lin2618 similar to phosphomannomutase and phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D lin1070 similar to putative UDP-glucose pyrophosphorylases K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D galE UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D lin2105 similar to PTS mannose-specific enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0777 similar to mannose-specific phosphotransferase system (PTS) component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0020 similar to PTS system, fructose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0143 similar to PTS system mannose-specific, factor IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D lin0775 similar to mannose-specific phosphotransferase system (PTS) component IIC K02795 manY; mannose PTS system EIIC component
D lin0144 similar to PTS system mannose-specific, factor IIC K02795 manY; mannose PTS system EIIC component
D lin0022 similar to PTS system, fructose-specific IIC component K02795 manY; mannose PTS system EIIC component
D lin0774 similar to mannose-specific phosphotransferase system (PTS) component IID K02796 manZ; mannose PTS system EIID component
D lin0145 similar to PTS system mannose-specific, factor IID K02796 manZ; mannose PTS system EIID component
D lin0023 similar to PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D pgi glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D lin2215 similar to mannnose-6 phospate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D lin0858 similar to phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:lin00620]
D lin2868 similar to acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D nifJ highly similar to pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D pdhA highly similar to pyruvate dehydrogenase (E1 alpha subunit) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PdhB highly similar to pyruvate dehydrogenase (E1 beta subunit) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D pdhC highly similar to pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pflA similar to pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D pflB pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D lin1143 similar to acetaldehyde dehydrogenase / alcohol dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D lin1675 similar to Alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D ackA highly similar to acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AckA2 similar to acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D pta similar to phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pykA highly similar to pyruvate kinases K00873 PK; pyruvate kinase [EC:2.7.1.40]
D accA highly similar to acetyl CoA carboxylase (alpha subunit) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D lin1393 similar to acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D lin1394 acetyl-CoA carboxylase subunit (biotin carboxylase subunit) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D accD highly similar to acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D lin1418 lin1418 K01512 acyP; acylphosphatase [EC:3.6.1.7]
D lin2275 similar to propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D lin0730 similar to pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D ldh similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1775 similar to L-lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1569 similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin0819 similar to oxydoreductases K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D lin2271 similar to glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D lin0429 similar to B. subtilis YyaH protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D lin1982 similar to conserved hypothetical proteins K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D lin2270 similar to unknown proteins K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D lin2029 similar to malolactic enzyme (malate dehydrogenase) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D pycA highly similar to pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D citG similar to fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D lin1981 similar to pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D leuA similar to 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lin00630]
D lin2868 similar to acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D citZ highly similar to citrate synthase subunit II K01647 CS; citrate synthase [EC:2.3.3.1]
D citB highly similar to aconitate hydratases K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D kat catalase K03781 katE; catalase [EC:1.11.1.6]
D glnA highly similar to glutamine synthetases K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D glyA highly similar to glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D lin1386 similar to glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D lin1387 similar to glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D lin1385 similar to aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin2519 similar to glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D lin2965 similar to unknown proteins K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D lin2731 similar to formate dehydrogenase alpha chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
C 00640 Propanoate metabolism [PATH:lin00640]
D lin2868 similar to acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D lin2275 similar to propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D ackA highly similar to acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AckA2 similar to acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D pta similar to phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D lin1124 similar to Salmonella enterica PduL protein K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222]
D lin1409 similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D BfmBAB similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D lin1411 similar to branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pflA similar to pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D pflB pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D lin0767 similar to alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D accA highly similar to acetyl CoA carboxylase (alpha subunit) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D lin1393 similar to acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D lin1394 acetyl-CoA carboxylase subunit (biotin carboxylase subunit) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D accD highly similar to acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D lin0401 highly similar to B. subtilis methylmalonate-semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D ldh similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1775 similar to L-lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1569 similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin2020 similar to methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D lin0563 similar to NADH-dependent butanol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D lin0819 similar to oxydoreductases K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D lin1117 highly similar to propanediol dehydratase, alpha subunit K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D lin1118 similar to diol dehydrase (diol dehydratase) gamma subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D lin1119 similar to diol dehydrase (diol dehydratase) gamma subunit (pddC) K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D lin1130 similar to NADPH-dependent butanol dehydrogenase K13921 pduQ; 1-propanol dehydrogenase
D lin1129 similar to ethanolamine utilization protein EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:lin00650]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D lin1407 similar to branched-chain fatty-acid kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D lin1406 similar to phosphotransbutyrylase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D lin1143 similar to acetaldehyde dehydrogenase / alcohol dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D lin1675 similar to Alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D lin2463 similar to glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin2528 highly similar to glutamate decarboxylases K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin0913 similar to succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D pflA similar to pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D pflB pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D nifJ highly similar to pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D lin1454 similar to hydroxy-3-methylglutaryl coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D ilvB similar to acetolactate synthase (acetohydroxy-acid synthase) (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D alsS similar to alpha-acetolactate synthase protein, AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ilvN similar to acetolactate synthase (acetohydroxy-acid synthase) (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D lin2099 similar to alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:lin00660]
D ilvB similar to acetolactate synthase (acetohydroxy-acid synthase) (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D alsS similar to alpha-acetolactate synthase protein, AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ilvN similar to acetolactate synthase (acetohydroxy-acid synthase) (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D lin2099 similar to alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D leuC similar to 3-isopropylmalate dehydratase (large subunit) K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D leuD similar to 3-isopropylmalate dehydratase (small subunit) K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D leuB similar to 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:lin00562]
D lin1054 similar to extragenic suppressor protein SuhB and to myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D lin0404 similar to B. subtilis IolD protein, to acetolactate synthase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D lin0402 similar to B. subtilis IolB protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D lin0403 similar to B. subtilis IolC protein and to fructokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D fbaA highly similar to fructose-1,6-bisphosphate aldolase type II K03339 iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase [EC:4.1.2.29]
D lin0401 highly similar to B. subtilis methylmalonate-semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D lin0364 similar to triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D tpi highly similar to triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lin00190]
D lin2488 similar to NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D lin2787 similar to NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D ctaB highly similar to heme A farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D ctaA similar to heme O oxygenase K02259 COX15; heme a synthase [EC:1.17.99.9]
D qoxD highly similar to quinol oxidase aa3-600 chain IV K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D qoxC AA3-600 quinol oxidase subunit III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D qoxB AA3-600 quinol oxidase subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D qoxA AA3-600 quinol oxidase subunit II K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D cydA highly similar to cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D cydB highly similar to cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D lin0136 similar to ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D atpA highly similar to H+-transporting ATP synthase chain alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D lin0138 similar to ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D atpD highly similar to H+-transporting ATP synthase chain beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D lin0137 similar to ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D atpG highly similar to H+-transporting ATP synthase chain gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D lin0135 weakly similar to ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D atpH highly similar to H+-transporting ATP synthase chain delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D lin0139 similar to ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D atpC highly similar to H+-transporting ATP synthase chain epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D atpB highly similar to H+-transporting ATP synthase chain a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D atpF highly similar to H+-transporting ATP synthase chain b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D lin0134 similar to ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D atpE highly similar to H+-transporting ATP synthase chain c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D lin0358 weakly similar to inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D lin1486 conserved hypothetical protein K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D lin2624 similar to B. subtilis P-Ser-HPr phosphatase K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:lin00680]
D lin2731 similar to formate dehydrogenase alpha chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D glyA highly similar to glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D eno highly similar to enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D lin2238 similar to fructose-1,6-biphosphate aldolase type II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin0378 similar to D-fructose-1,6-biphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D lin2239 similar to fructose-1,6-biphosphate aldolase type II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D fbp highly similar to fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D lin1606 lin1606 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ackA highly similar to acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AckA2 similar to acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D pta similar to phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D lin2868 similar to acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D lin2308 similar to phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D pgm highly similar to phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D lin2956 similar to D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D serC highly similar to phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:lin00910]
D lin0569 similar to NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D glnA highly similar to glutamine synthetases K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D lin1845 similar to glutamate synthase (large subunit) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D lin1844 similar to glutamate synthase (small subunit) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D lin0807 similar to carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:lin00920]
D lin2445 similar to NADH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D lin1610 similar to unknown proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D cysE similar to serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D cysK highly similar to cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D lin0603 similar to homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D lin1788 similar to cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lin00061]
D accA highly similar to acetyl CoA carboxylase (alpha subunit) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D lin1393 similar to acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D lin1394 acetyl-CoA carboxylase subunit (biotin carboxylase subunit) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D accD highly similar to acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D acpA highly similar to acyl carrier proteins K02078 acpP; acyl carrier protein
D fabD similar to malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D lin2305 similar to 3-oxoacyl-acyl-carrier protein synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D lin2304 similar to 3-oxoacyl-acyl-carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D fabG similar to 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin1431 similar to 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin2948 similar to reductases K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin2668 similar to hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D lin0969 similar to enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D lin0810 similar to oxidoreductases K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D lin1796 similar to glucose 1-dehydrogenase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lin00071]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D lin1675 similar to Alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lin00561]
D lin2965 similar to unknown proteins K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D lin2843 similar to dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D lin0366 similar to dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D lin0365 similar to dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D lin2844 similar to hypothetical dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D lin0369 similar to unknown proteins K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D lin2845 lin2845 K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D lin0362 similar to dehydrogenase/reductase K22251 golD; glycerol dehydrogenase [EC:1.1.1.6]
D lin1573 similar to glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D plsX similar to plsX protein involved in fatty acid/phospholipid synthesis K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D lin1323 conserved hypothetical protein, similar to B. subtilis YneS protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D lin1688 similar to 1-acylglycerol-3-phosphate O-acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D lin1865 similar to unknown protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D lin2700 weakly similar to human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D lin0927 hypothetical transmembrane protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:lin00564]
D gpsA similar to NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D glpD similar to glycerol 3 phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D lin1323 conserved hypothetical protein, similar to B. subtilis YneS protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D lin1688 similar to 1-acylglycerol-3-phosphate O-acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D tagD highly similar to glycerol-3-phosphate cytidylyltransferase (gct), CDP-glycerol pyrophosphorylase (teichoic acid biosynthesis protein D) K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D lin1865 similar to unknown protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D lin0625 C-terminal domain similar to glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D lin1330 similar to glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D eutA similar to ethanolamine utilization protein EutA (putative chaperonin) K04019 eutA; ethanolamine utilization protein EutA
D eutB similar to ethanolamine ammonia-lyase, heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D eutC similar to ethanolamine ammonia-lyase, light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D cdsA similar to phosphatidate cytidylyltransferase (CDP-diglyceride synthase) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D lin1433 similar to phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D lin2646 similar to cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D lin0008 similar to cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D lin1872 similar to unknown protein K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D lin2623 similar to acetyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lin00230]
D lin2079 similar to unknown proteins K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D drm similar to phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D lin2618 similar to phosphomannomutase and phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D prs.1 phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D prs.2 similar to phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D purF glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D purD phosphoribosylglycinamide synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D purN highly similar to phosphoribosylglycinamide formyltransferases K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D purQ phosphoribosylformylglycinamidine synthetase I K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D lin1883 similar to unknown protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D purL similar to phosphoribosylformylglycinamidine synthetase II K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D purM phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D purK phosphoribosylaminoimidazole carboxylase II K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D purE hosphoribosylaminoimidazole carboxylase I K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D purC phosphoribosylaminoimidazole succinocarboxamide synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D purB adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D purH Bifunctional phosphoribosylaminoimidazole carboxy formyl formyltransferase and inosine-monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D apt similar to adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D lin0177 similar to 5'-nucleotidase, putative peptidoglycan bound protein (LPXTG motif) K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D pnp similar to purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D deoD purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D lin0251 fusion protein, N-terminal part similar to B. subtilis YacA protein, C-terminal part similar to hypoxanthine-guanine phosphoribosyltransferase K15780 tilS-hprT; bifunctional protein TilS/HprT [EC:6.3.4.19 2.4.2.8]
D lin0179 similar to inosine monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D guaB similar to inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D ndk similar to nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D lin1202 conserved hypothetical protein, similar to B. subtilis YsnA protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D lin1998 similar to xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D guaA highly similar to GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D lin1941 similar to guanylate kinases K00942 gmk; guanylate kinase [EC:2.7.4.8]
D lin2259 similar to ribonucleoside-diphosphate reductase, subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D lin2258 similar to ribonucleoside-diphosphate reductase, subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D lin0305 highly similar to anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D lin2806 similar to dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D relA similar to (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D lin0966 similar to B. subtilis YjbM protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D lin0794 weakly similar to GTP-pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D purA highly similar to adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D adeC highly similar to adenine deaminases K01486 ade; adenine deaminase [EC:3.5.4.2]
D lin1438 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D adk highly similar to adenylate kinases K00939 adk; adenylate kinase [EC:2.7.4.3]
D lin0541 similar to N-carbamyl-L-amino acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
C 00240 Pyrimidine metabolism [PATH:lin00240]
D pyrAB highly similar to carbamoyl-phosphate synthetase (catalytic subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D pyrAa highly similar to carbamoyl-phosphate synthetase (glutaminase subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D pyrB highly similar to aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D pyrC highly similar to dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D pyrD highly similar to dihydroorotase dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D pyrDII highly similar to dihydroorotate dehydrogenase (electron transfer subunit) K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D pyrE highly similar to orotate phosphoribosyltransferases K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D pyrF highly similar to orotidine 5'-phosphate decarboxylases K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D smbA highly similar to uridylate kinases K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D ndk similar to nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D pyrG highly similar to CTP synthases K01937 pyrG; CTP synthase [EC:6.3.4.2]
D cmk similar to cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D udk similar to Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D lin0177 similar to 5'-nucleotidase, putative peptidoglycan bound protein (LPXTG motif) K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D upp highly similar to uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D pyrR highly similar to pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D lin1438 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D lin2434 similar to Erwinia chrysanthemi IndA protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D pdp similar to pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D lin1500 similar to cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D lin0305 highly similar to anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D lin2259 similar to ribonucleoside-diphosphate reductase, subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D lin2258 similar to ribonucleoside-diphosphate reductase, subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D comEB similar to B. subtilis ComEB protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D lin2841 similar to thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D lin1799 similar to deoxyuridine triphosphate nucleotidohydrolases K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D lin2688 similar to thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D lin1988 similar to thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lin00250]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D nadB similar to L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D lin2054 similar to asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D ansB.1 similar to asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D lin0310 conserved hypothetical protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D lin1614 similar to alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D argG similar to argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D argH similar to argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D purA highly similar to adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D purB adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D pyrB highly similar to aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D lin2463 similar to glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin2528 highly similar to glutamate decarboxylases K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin0913 similar to succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D lin1845 similar to glutamate synthase (large subunit) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D lin1844 similar to glutamate synthase (small subunit) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D lin0569 similar to NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D glnA highly similar to glutamine synthetases K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D pyrAB highly similar to carbamoyl-phosphate synthetase (catalytic subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D pyrAa highly similar to carbamoyl-phosphate synthetase (glutaminase subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D purL similar to phosphoribosylformylglycinamidine synthetase II K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D lin0734 similar to L-glutamine-D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D purF glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lin00260]
D lin1198 similar to aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin1475 similar to aspartokinase I (alpha and beta subunits) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin2473 similar to aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin1476 similar to aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D hom highly similar to homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D thrB highly similar to homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D thrC highly similar to threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D glyA highly similar to glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D lin2965 similar to unknown proteins K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D lin2308 similar to phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D pgm highly similar to phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D lin2956 similar to D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D serC highly similar to phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D lin1386 similar to glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D lin1387 similar to glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D lin1385 similar to aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin2519 similar to glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D lin1926 similar to L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D lin1927 similar to phosphoglycerate dehydrogenase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D ilvA similar to threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D trpA highly similar to tryptophan synthase (alpha subunit) K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D trpB highly similar to tryptophan synthase (beta subunit) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:lin00270]
D cysE similar to serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D cysK highly similar to cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D lin1787 similar to cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D lin2469 similar to aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D lin1786 similar to 5-methyltetrahydrofolate-homocysteine methyltransferase (metH) K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D lin1789 similar to cobalamin-independent methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D metK similar to S-methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D lin1529 similar to 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D lin0314 similar to aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D lin1637 similar to unknown protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D lin1327 conserved hypothetical protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D lin1198 similar to aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin1475 similar to aspartokinase I (alpha and beta subunits) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin2473 similar to aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin1476 similar to aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D hom highly similar to homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D lin0603 similar to homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D lin1788 similar to cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D lin0604 similar to O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D lin0977 similar to branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D lin2913 similar to gamma-glutamylcysteine synthetase (for the N_terminal part) and to cyanophycin synthetase (C-terminal part) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D ldh similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1775 similar to L-lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1569 similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1926 similar to L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D lin1927 similar to phosphoglycerate dehydrogenase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D lin2956 similar to D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D serC highly similar to phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:lin00280]
D lin0977 similar to branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D lin1409 similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D BfmBAB similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D lin1411 similar to branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1004 similar to 3-hydroxyisobutyrate dehydrogenase (B. subtilis YkwC protein) K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D lin0401 highly similar to B. subtilis methylmalonate-semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D lin1454 similar to hydroxy-3-methylglutaryl coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lin00290]
D ilvA similar to threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D leuC similar to 3-isopropylmalate dehydratase (large subunit) K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D leuD similar to 3-isopropylmalate dehydratase (small subunit) K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D leuB similar to 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D ilvB similar to acetolactate synthase (acetohydroxy-acid synthase) (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D alsS similar to alpha-acetolactate synthase protein, AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ilvN similar to acetolactate synthase (acetohydroxy-acid synthase) (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ilvC similar to ketol-acid reductoisomerase (acetohydroxy-acid isomeroreductase) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D ilvD similar to dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D lin0977 similar to branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D leuA similar to 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:lin00300]
D hom highly similar to homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D lin1198 similar to aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin1475 similar to aspartokinase I (alpha and beta subunits) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin2473 similar to aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin1476 similar to aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D lin1474 similar to dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D dapB similar to dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D argD highly similar to N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D lin1661 similar to Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D lin0289 similar to succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D lin2126 similar to diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D lysA similar to diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D lin1010 similar to tetrahydrodipicolinate succinylase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D lin1005 similar to aminotransferases (to B. subtilis PatA protein) K00841 patA; aminotransferase [EC:2.6.1.-]
D lin1011 similar to N-acyl-L-amino acid amidohydrolases K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D murE similar to UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lin00310]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D lin0913 similar to succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D daaA D-Amino Acid Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:lin00220]
D argF highly similar to ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D argG similar to argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D argH similar to argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D lin0036 similar to arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D purL similar to phosphoribosylformylglycinamidine synthetase II K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D glnA highly similar to glutamine synthetases K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D lin0569 similar to NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D argJ highly similar to ornithine acetyltransferase and amino-acid acetyltransferases K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D argB highly similar to N-acetylglutamate 5-phosphotransferase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D argC similar to N-acetylglutamate gamma-semialdehyde dehydrogenases K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D argD highly similar to N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:lin00330]
D lin2796 similar to creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D lin0009 similar to spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D lin2499 similar to acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D lin0842 similar to amidases K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D lin2752 lin2752 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D lin0414 similar to 1-pyrroline-5-carboxylate reductase (ProC) K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D lin1424 similar to pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D proB gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D proA gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D daaA D-Amino Acid Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:lin00340]
D hisG similar to ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D hisZ histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D lin0570 similar to phosphorybosil-AMP-cyclohydrolase (HisI2 protein) K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D lin0571 similar to phosphoribosyl-AMP cyclohydrolase (HisI1 protein) K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D hisA highly similar to phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D hisH similar to amidotransferases K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D hisF highly similar to cyclase HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D hisB imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D hisC similar to histidinol-phosphate aminotransferase and tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D hisJ similar histidinol phosphate phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D hisD highly similar to histidinol dehydrogenases K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:lin00350]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D hisC similar to histidinol-phosphate aminotransferase and tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D lin1675 similar to Alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D lin0913 similar to succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:lin00360]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D hisC similar to histidinol-phosphate aminotransferase and tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D daaA D-Amino Acid Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D lin0842 similar to amidases K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D lin2752 lin2752 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:lin00380]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D lin0842 similar to amidases K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D lin2752 lin2752 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D kat catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lin00400]
D aroA 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D aroB similar to 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D lin0494 similar to 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D lin1525 similar to shikimate 5-dehydrogenase (AroD) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D lin1861 similar to shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D aroE similar to 5-enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D aroF similar to chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D trpE highly similar to anthranilate synthase alpha subunit K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D trpG highly similar to anthranilate synthase beta subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D trpD highly similar to anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D trpF phosphoribosyl anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D trpC highly similar to indol-3-glycerol phosphate synthases K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D trpA highly similar to tryptophan synthase (alpha subunit) K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D trpB highly similar to tryptophan synthase (beta subunit) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D lin2040 similar to chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D tyrA similar to prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D lin1571 similar to prephenate dehydratase PheA K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D hisC similar to histidinol-phosphate aminotransferase and tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:lin00410]
D panD similar to aspartate 1-decarboxylases K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D lin2463 similar to glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin2528 highly similar to glutamate decarboxylases K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D panC similar to panthotenate synthetases K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D lin0401 highly similar to B. subtilis methylmalonate-semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:lin00430]
D lin2463 similar to glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin2528 highly similar to glutamate decarboxylases K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin1614 similar to alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D pta similar to phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ackA highly similar to acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AckA2 similar to acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lin00450]
D lin1788 similar to cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D lin1787 similar to cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D lin2469 similar to aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D lin1786 similar to 5-methyltetrahydrofolate-homocysteine methyltransferase (metH) K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D lin1789 similar to cobalamin-independent methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D lin2508 similar to aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D trxB thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D metS methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lin00460]
D lin1840 similar to beta-glucosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D lin0391 similar to beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D lin2054 similar to asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D glyA highly similar to glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lin00470]
D lin0885 similar to alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D daaA D-Amino Acid Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D ddlA D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D dltA D-alanine-activating enzyme (dae), D-alanine-D-alanyl carrier protein ligase (dcl) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D dltC D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D purL similar to phosphoribosylformylglycinamidine synthetase II K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D racE similar to glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D murD similar to UDP-N-acetylmuramoylalanine D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D lin0197 similar to chloromuconate cycloisomerase ykfB of B. subtilis K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D lin2126 similar to diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D lysA similar to diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:lin00480]
D lin2913 similar to gamma-glutamylcysteine synthetase (for the N_terminal part) and to cyanophycin synthetase (C-terminal part) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D lin0906 similar to glutathione Reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D lin1472 similar to glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D citC highly similar to isocitrate dehyrogenases K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D lin1413 similar to 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D lin2085 similar to glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D lin0982 similar to glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:lin00511]
D lin2123 similar to alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D lin2122 similar to putative sugar hydrolases K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:lin00542]
D lin0958 similar to undacaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D lin2663 similar to B. subtilis TagO teichoic acid linkage unit synthesis protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lin00541]
D lin1070 similar to putative UDP-glucose pyrophosphorylases K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D galE UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D lin2215 similar to mannnose-6 phospate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D lin0858 similar to phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D gcaD highly similar to UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D lin2681 similar to UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lin00550]
D murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D murZ highly similar to UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D lin1459 weakly similar to UDP-N-acetylglucosaminyl-3-enolpyruvate reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D murC similar to UDP-N-acetyl muramate-alanine ligases K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D murD similar to UDP-N-acetylmuramoylalanine D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D murE similar to UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ddlA D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D lin1501 similar to diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D lin1352 similar to undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D lin2125 similar to unknown proteins K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D lin1664 similar to unknown proteins K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D mraY similar to phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D murG similar to peptidoglycan synthesis enzymes, putative phospho-N-acetylmuramoyl-pentapeptide-transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D pbpA similar to penicillin-binding protein 2A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D lin2331 similar to penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D pbpB similar to penicillin-binding protein 2B K08724 pbpB; penicillin-binding protein 2B
D lin1477 similar to penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D lin2897 similar to D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D lin1969 similar to similar to D-alanyl-D-alanine carboxypeptidases K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:lin00552]
D lin2125 similar to unknown proteins K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D lin1664 similar to unknown proteins K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D lin0958 similar to undacaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D lin2663 similar to B. subtilis TagO teichoic acid linkage unit synthesis protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D lin2665 similar to B. subtilis TagA protein involved in polyglycerol phosphate biosynthesis K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D lin1075 similar to teichoic acid biosynthesis protein B precursor K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D lin1074 similar to B. subtilis TagF protein (probable CDPglycerol glycerophosphotransferase) K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D dltA D-alanine-activating enzyme (dae), D-alanine-D-alanyl carrier protein ligase (dcl) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D dltC D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D dltB DltB protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid K03739 dltB; membrane protein involved in D-alanine export
D dltD DltD protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid K03740 dltD; D-alanine transfer protein
D lin0463 similar to B. subtilis transcription regulator LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D lin1025 similar to B. subtilis LytR protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D lin2662 similar to B. subtilis putative transcriptional regulator LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D lin1068 similar to hypothetical protein 3 (capsulation locus) of Haemophilus influenzae K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D lin0927 hypothetical transmembrane protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D lin2700 weakly similar to human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D lin2699 similar to galactosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D lin0647 similar to conserved hypothetical proteins K25599 ltaP; lipoteichoic acid primase
D lin0635 similar to unknown protein K25620 gtlB; lipoteichoic acid galactosyltransferase
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lin00543]
D lin0958 similar to undacaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D lin2663 similar to B. subtilis TagO teichoic acid linkage unit synthesis protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D cysE similar to serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lin00730]
D lin0342 similar to phosphomethylpyrimidine kinase (ThiD) K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D lin2130 similar to a NifS-like protein required for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1635 similar to iron-sulfur cofactor synthesis protein nifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1548 similar to iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1634 similar to thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D tktB similar to D-1-deoxyxylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D lin0341 similar to hydroxyethylthiazole kinase (ThiM) K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D lin0343 similar to thiamin-phosphate pyrophosphorylase (ThiE) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D lin1933 similar to unknown proteins K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D lin1369 similar to conserved hypothetical proteins K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D lin1931 weakly similar to thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D adk highly similar to adenylate kinases K00939 adk; adenylate kinase [EC:2.7.4.3]
D lin0340 similar to thiamin biosynthesis protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:lin00740]
D lin2364 similar to unkown proteins K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D ribC highly similar to riboflavin kinase and FAD synthase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D lin2445 similar to NADH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D lin0323 similar to FMN-containing NADPH-linked nitro/flavin reductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D lin0935 similar to Nitroflavin-reductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D lin2216 similar to FMN-containing NADPH-linked nitro/flavin reductase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39]
D lin0341 similar to hydroxyethylthiazole kinase (ThiM) K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D lin2079 similar to unknown proteins K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:lin00750]
D thiD highly similar to phosphomethylpyrimidine kinase thiD K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D serC highly similar to phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D thrC highly similar to threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D lin2205 similar to a protein required for pyridoxine synthesis K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D lin2206 lin2206 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lin00760]
D nadB similar to L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D nadA similar to quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D nadC similar to nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D lin1077 conserved hypothetical protein, similar to B. subtilis YueK protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D pnp similar to purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D deoD purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D lin0177 similar to 5'-nucleotidase, putative peptidoglycan bound protein (LPXTG motif) K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D lin1523 similar to unknown proteins K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D lin1078 similar to NH(3)-dependent NAD(+) synthetases, nitrogen regulatory protein K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D lin2716 similar to nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D lin2882 similar to regulatory proteins of the SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D lin0967 similar to conserved hypothetical proteins like to B. subtilis YjbN protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D lin1628 similar to unknown proteins K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D lin0913 similar to succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:lin00770]
D ilvB similar to acetolactate synthase (acetohydroxy-acid synthase) (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D alsS similar to alpha-acetolactate synthase protein, AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ilvN similar to acetolactate synthase (acetohydroxy-acid synthase) (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ilvC similar to ketol-acid reductoisomerase (acetohydroxy-acid isomeroreductase) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D ilvD similar to dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D panB similar to ketopantoate hydroxymethyltransferases K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D lin2152 weakly similar to ketopantoate reductase involved in thiamin biosynthesis K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D panC similar to panthotenate synthetases K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D lin0923 similar to pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D lin0253 conserved hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D lin1939 similar to pantothenate metabolism flavoprotein homolog K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D lin2158 similar to phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D lin1598 similar to unknown proteins K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D lin0884 similar to holo-acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D lin0977 similar to branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D panD similar to aspartate 1-decarboxylases K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:lin00780]
D lin2304 similar to 3-oxoacyl-acyl-carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D fabG similar to 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin1431 similar to 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin2948 similar to reductases K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin2668 similar to hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D lin0969 similar to enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D birA similar to transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lin00785]
D lin0931 similar to lipoate protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D lin0758 similar to lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D lin2711 lin2711 K18821 lipL; lipoyl amidotransferase [EC:2.3.1.200]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pdhA highly similar to pyruvate dehydrogenase (E1 alpha subunit) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PdhB highly similar to pyruvate dehydrogenase (E1 beta subunit) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D pdhC highly similar to pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D lin1409 similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D BfmBAB similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D lin1411 similar to branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D lin1386 similar to glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D lin1387 similar to glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D lin1385 similar to aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D lin2519 similar to glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:lin00790]
D lin2047 similar to GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D folA highly similar to dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D folK similar to 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D sul highly similar to dihydropteroate synthases K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D lin1987 similar to dihydrofolate reductases K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D folC similar to Folyl-polyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D lin2893 similar to para-aminobenzoate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D lin1039 similar to molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D lin1038 similar to molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D lin1036 similar to molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D lin1040 similar to molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D lin1034 similar to molybdopterin biosynthesis protein moeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D lin1030 weakly similar to molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:lin00670]
D lin1987 similar to dihydrofolate reductases K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D lin1990 similar to formyl-tetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D folD highly similar to methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D glyA highly similar to glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D purN highly similar to phosphoribosylglycinamide formyltransferases K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D purH Bifunctional phosphoribosylaminoimidazole carboxy formyl formyltransferase and inosine-monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D fmt similar to methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D lin1385 similar to aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D lin1786 similar to 5-methyltetrahydrofolate-homocysteine methyltransferase (metH) K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D lin1988 similar to thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D lin1373 similar to 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lin00860]
D hemA highly similar to glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D gsaB glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D hemL highly similar to glutamate-1-semialdehyde 2,1-aminotransferases K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D hemB highly similar to delta-aminolevulinic acid dehydratases (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D hemC highly similar to porphobilinogen deaminases (hydroxymethylbilane synthase) K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D lin1590 similar to uroporphyrinogen III cosynthase (HemD) K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D hemE similar to uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D hemN highly similar to coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D lin0883 similar to protoporphyrinogen IX and coproporphyrinogen III oxidase (HemY) K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D hemH similar to ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D lin2218 similar to unknown proteins K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D lin1164 similar uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D lin1105 similar to uroporphyrin-III C-methyltransferase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D ctaB highly similar to heme A farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D ctaA similar to heme O oxygenase K02259 COX15; heme a synthase [EC:1.17.99.9]
D cbiK similar to anaerobic Cobalt Chelatase In Cobalamin Biosynthesis K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D cbiL similar to S-adenosyl-methionine: precorrin-2 methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D cbiH similar to precorrin methylase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D cbiF similar to precorrin-3 methylase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D cbiG similar to cobalamin biosynthesis protein G CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D lin1163 similar to cobalamin biosynthesis J protein CbiJ K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D cbiD similar to cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D lin1159 similar to precorrin decarbocylase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D cbiE similar to precorrin methylase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D lin1156 similar to precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D cbiA similar to cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D lin1172 similar to unknown protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D cbiP similar to cobyric acid synthase CbiP K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D lin1155 similar to cobalamine synthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D lin1111 similar to bifunctional cobalamin biosynthesis protein CopB; cobinamide phosphatase guanylyltransferase) K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D lin1112 highly similar to cobalamin (5'-phosphatase) synthetase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D lin1113 similar to alpha-ribazole-5'-phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D lin1134 similar to Salmonella enterica PduX protein K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D cobD similar to Salmonella typhimurium CobD protein and to histidinol-phosphate aminotransferase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D lin1145 similar to cobalamin adenosyl transferase K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
D lin0487 lin0487 K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lin00130]
D menH similar to 2-heptaprenyl-1,4-naphthoquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D menF similar to menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D menD similar to 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / 2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D lin1782 similar to prolyl aminopetidases K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D lin2664 similar to B. subtilis O-succinylbenzoate-CoA synthase (MenC) K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D menE similar to O-succinylbenzoic acid-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D menB similar to dihydroxynapthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D lin2484 similar to B. subtilis YuxO protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D lin1785 similar to menaquinone biosynthesis proteins K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D lin1903 weakly similar to Nad(P)h Oxidoreductase chain B K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D lin0459 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lin00900]
D tktB similar to D-1-deoxyxylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D lin1354 similar to deoxyxylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D lin0267 similar to nucleotidylyl transferase, pyrophosphorylase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D lin0229 similar to B. subtilis YabH protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D lin0268 similar to B. subtilis YacN protein K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D lin1454 similar to hydroxy-3-methylglutaryl coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D lin0821 similar to 3-hydroxy-3-methylglutaryl-coenzyme a reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D lin0010 similar to mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D lin0012 similar to mevalonate kinases K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D lin0011 similar to mevalonate diphosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D lin1420 similar to unknown protein K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D lin1400 similar to geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D lin2046 similar to heptaprenyl diphosphate synthase component I K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D lin2044 similar to heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D lin1352 similar to undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:lin00906]
D lin0999 similar to phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D lin0360 similar to transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D tkt highly similar to transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D lin2809 similar to transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D menF similar to menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:lin00946]
D lin1840 similar to beta-glucosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D lin0391 similar to beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D lin0199 some similarities to probable beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:lin00332]
D proB gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D proA gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:lin00261]
D lin1198 similar to aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin1475 similar to aspartokinase I (alpha and beta subunits) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin2473 similar to aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D lin1476 similar to aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D lin1474 similar to dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D dapB similar to dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lin00521]
D lin1376 similar to glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D lin2618 similar to phosphomannomutase and phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D lin1054 similar to extragenic suppressor protein SuhB and to myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D lin1376 similar to glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:lin00401]
D tyrA similar to prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D hisC similar to histidinol-phosphate aminotransferase and tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D trpE highly similar to anthranilate synthase alpha subunit K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D trpG highly similar to anthranilate synthase beta subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D fabD similar to malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D fabG similar to 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin1431 similar to 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin2948 similar to reductases K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin0969 similar to enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D acpA highly similar to acyl carrier proteins K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:lin00999]
D metK similar to S-methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D lin1525 similar to shikimate 5-dehydrogenase (AroD) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D lin1840 similar to beta-glucosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D lin0391 similar to beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lin00362]
D lin0649 similar to unknown proteins K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D lin2709 similar to 4-oxalocrotonate isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:lin00627]
D lin0842 similar to amidases K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D lin2752 lin2752 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D lin1418 lin1418 K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:lin00625]
D lin1675 similar to Alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D lin0649 similar to unknown proteins K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:lin00622]
D lin0649 similar to unknown proteins K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D lin2709 similar to 4-oxalocrotonate isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:lin00643]
D lin0842 similar to amidases K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D lin2752 lin2752 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D lin0649 similar to unknown proteins K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D lin2275 similar to propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D lin2709 similar to 4-oxalocrotonate isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:lin00626]
D lin1675 similar to Alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lin03020]
D rpoB RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D rpoC RNA polymerase (beta' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D rpoA highly similar to RNA polymerase (alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D lin1940 lin1940 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D lin2705 similar to B. subtilis RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
D lin0195 similar to ATP dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lin03010]
D lin2052 similar to similar to ribosomal protein S1 like protein K02945 RP-S1; small subunit ribosomal protein S1
D rpsB 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D rpsC ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D rpsD ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D rpsE ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D rpsF ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D rpsG ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D rpsH ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D rpsI ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D rpsJ ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D rpsK ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D rpsL ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D rpsM ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D lin1995 similar to ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D rpsN ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D rpsO ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D rpsP ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D rpsQ ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D rpsR ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D rpsS ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D rpsT ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D rpsU 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D rplA ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D rplB ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D rplC ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D rplD ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D rplE ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D rplF ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D rplL ribosomal protein L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D rplI 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D rplJ ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D rplK ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D rplM ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D rplN ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D rplO ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D rplP ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D rplQ ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D rplR ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D rplS ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D rplT ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D rplU ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D rplV ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D rplW ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D rplX ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D ctc similar to B. subtilis general stress protein K02897 RP-L25; large subunit ribosomal protein L25
D rpmA ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D rpmB ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D rpmC ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D rpmD ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D rpmE ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D rpmF.2 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D rpmF.1 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D rpmG ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D lin0276 50S ribosomal protein K02913 RP-L33; large subunit ribosomal protein L33
D rpmH ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D rpmI ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D rpmJ ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D rRNA-16s-2 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-1 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-3 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-4 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-5 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-6 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-23s-1 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-2 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-3 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-4 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-5 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-6 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-5s-1 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-2 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-3 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-4 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-5 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-6 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lin00970]
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-4 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His-2 tRNA-His K14226 tRNA-His; tRNA His
D tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D gltX highly similar to glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D gatA glutamyl-tRNA(Gln) amidotransferase (subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D gatB glutamyl-tRNA(Gln) amidotransferase (subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D gatC glutamyl-tRNA(Gln) amidotransferase (subunit C) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D alaS alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D aspS aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ansB.2 similar to asparaginyl-tRNA synthetases K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D glyQ similar to glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D glyS similar to glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D thrS threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D serS seryl-trna synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D cysS cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D metS methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D fmt similar to methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D valS valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D leuS leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ileS isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D lysS lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D argS arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D proS prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D hisS histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D pheS phenylalany-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D pheT.1 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D tyrS tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D trpS tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lin03060]
D secY highly similar to preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D secE highly similar to preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE
D lin2545 similar to preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D lin1562 similar to protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D lin1564 similar to unknown proteins K03210 yajC; preprotein translocase subunit YajC
D lin2986 highly similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin1416 similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin0592 similar to preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D secA translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ffh similar to signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D lin1917 similar to FtsY of E. coli and SRP receptor alpha-subunit K03110 ftsY; fused signal recognition particle receptor
D pli0037 similar to arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D lin0381 similar to conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D lin0380 similar to conserved hypothetical integral membrane protein K03118 tatC; sec-independent protein translocase protein TatC
D lin1308 similar to type-I signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D lin1309 similar to signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D lin1310 similar to signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D lsp highly similar to signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lin04122]
D lin2130 similar to a NifS-like protein required for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1635 similar to iron-sulfur cofactor synthesis protein nifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1548 similar to iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1547 similar to putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D lin1036 similar to molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D lin1039 similar to molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D lin1037 similar to molybdopterin converting factor (subunit 1). K03636 moaD; sulfur-carrier protein
D lin1041 similar to molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D lin1038 similar to molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D lin1040 similar to molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D lin1634 similar to thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lin03018]
D eno highly similar to enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D pnpA polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D lin2543 similar to exoribonuclease RNase-R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D lin0859 similar to ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D lin1214 similar to ATP-dependent RNA helicase (DEAD motif) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D lin2900 similar to ATP-dependent DNA helicases K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D recS similar to ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D rho highly similar to transcription terminator factor rho K03628 rho; transcription termination factor Rho
D lin1436 similar to unknown protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D lin1026 similar to conserved hypothetical proteins (in particular B. subtilis YkqC) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D lin1473 similar to unknown proteins K12574 rnj; ribonuclease J [EC:3.1.-.-]
D lin1606 lin1606 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnaK class I heat-shock protein (molecular chaperone) DnaK K04043 dnaK; molecular chaperone DnaK
D groEL class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D lin1333 similar to host factor-1 protein K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lin03030]
D dnaE highly similar to DNA polymerase III (alpha subunit) DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D polC highly similar to DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D dnaX highly similar to DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D lin0205 similar to B. subtilis DNA polymerase III (delta' subunit) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D lin1516 similar to unknown protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D dnaN DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnaC highly similar to replicative DNA helicases K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D dnaG DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ssb highly similar to single-strand binding protein (SSB) K03111 ssb; single-strand DNA-binding protein
D lin0097 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2667 similar to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2402 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin1993 similar to similar to RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D rnhB similar to ribonuclease H rnh K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D rnhC similar to B. subtilis ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D polA DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D lin1870 similar to DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lin03410]
D nth probable endonuclease III (DNA repair) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D lin1190 similar to uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D lin0408 similar to uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D lin1797 similar to A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D lin0928 similar to 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D mutM highly similar to formamidopyrimidine-DNA glycosylases K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D lin1680 similar to dna-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D lin1894 similar to 3'-exo-deoxyribonuclease exoA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D lin1487 similar to endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D polA DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D lin1560 similar to single-stranded-DNA-specific exonuclease (RecJ) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D lin1870 similar to DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lin03420]
D mfd transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D uvrA excinuclease ABC (subunit A) K03701 uvrA; excinuclease ABC subunit A
D uvrB excinuclease ABC (subunit B) K03702 uvrB; excinuclease ABC subunit B
D uvrC highly similar to excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D pcrA ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D polA DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D lin1870 similar to DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D lin0195 similar to ATP dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:lin03430]
D mutS DNA mismatch repair (recognition) K03555 mutS; DNA mismatch repair protein MutS
D lin1195 similar to MutS protein (MutS2) K07456 mutS2; DNA mismatch repair protein MutS2
D mutL DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D pcrA ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D lin1398 similar to exodeoxyribonuclease VII (large subunit) K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D lin1399 similar to exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D lin1560 similar to single-stranded-DNA-specific exonuclease (RecJ) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ssb highly similar to single-strand binding protein (SSB) K03111 ssb; single-strand DNA-binding protein
D lin0097 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2667 similar to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2402 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D dnaE highly similar to DNA polymerase III (alpha subunit) DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D polC highly similar to DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D dnaN DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnaX highly similar to DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D lin1516 similar to unknown protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D lin0205 similar to B. subtilis DNA polymerase III (delta' subunit) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D lin1870 similar to DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D lin0088 similar to site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:lin03440]
D lin1560 similar to single-stranded-DNA-specific exonuclease (RecJ) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ssb highly similar to single-strand binding protein (SSB) K03111 ssb; single-strand DNA-binding protein
D lin0097 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2667 similar to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2402 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RecF RecF protein K03629 recF; DNA replication and repair protein RecF
D lin1497 similar to B. subtilis RecO protein involved in DNA repair and homologous recombination K03584 recO; DNA repair protein RecO (recombination protein O)
D recR highly similar to recombination protein recR K06187 recR; recombination protein RecR
D recA Recombination protein recA K03553 recA; recombination protein RecA
D polA DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ruvA highly similar to Holliday junction DNA helicase (ruvA) K03550 ruvA; holliday junction DNA helicase RuvA
D ruvB highly similar to Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D lin1925 similar to ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D lin1544 similar to exodeoxyribonuclease V K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D dnaE highly similar to DNA polymerase III (alpha subunit) DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D polC highly similar to DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D dnaN DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D dnaX highly similar to DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D lin1516 similar to unknown protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D lin0205 similar to B. subtilis DNA polymerase III (delta' subunit) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D priA similar to primosomal replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lin02010]
D lin1033 similar to molybdate ABC transporter binding protein K02020 modA; molybdate transport system substrate-binding protein
D lin1032 similar to molybdenum ABC transporters (permease) K02018 modB; molybdate transport system permease protein
D lin1031 similar to ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D lin0800 similar to spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D lin0799 similar to spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D lin0798 similar to spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D lin0797 similar to spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D gbuC highly similar to glycine betaine ABC transporters (glycine betaine-binding protein) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pli0045 Pseudogene, similar to glycine-betaine binding (ABC transporter) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D gbuB highly similar to glycine betaine ABC transporters (permease) K02001 proW; glycine betaine/proline transport system permease protein
D gbuA highly similar to glycine betaine ABC transporter (ATP-binding protein) K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D lin1461 similar to glycine betaine/carnitine/choline ABC transporter (membrane protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D opuCC similar to glycine betaine/carnitine/choline ABC transporter (osmoprotectant-binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D opuCD similar to betaine/carnitine/choline ABC transporter (membrane p) K05846 opuBD; osmoprotectant transport system permease protein
D opuCB similar to glycine betaine/carnitine/choline ABC transporter (membrane protein) K05846 opuBD; osmoprotectant transport system permease protein
D opuCA similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D lin1460 similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D lin0304 similar to sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D lin2230 similar to maltose/maltodextrin ABC-transporter (binding protein) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D lin2229 similar to maltodextrin ABC-transport system (permease) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D lin2228 similar to maltodextrin ABC-transport system (permease) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D lin2115 weakly similar to putative sugar-binding lipoproteins K17318 lplA; putative aldouronate transport system substrate-binding protein
D lin2117 similar to putative transport system integral membrane protein K17319 lplB; putative aldouronate transport system permease protein
D lin2116 similar to putative ABC transporter, permease protein K17320 lplC; putative aldouronate transport system permease protein
D tcsA CD4+ T cell-stimulating antigen, lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D lin1427 similar to ABC transporter (permease proteins) K23535 nupB; general nucleoside transport system permease protein
D lin1428 similar to sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D lin1426 similar to sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D lin2642 similar to phosphate ABC transporter (binding protein) K02040 pstS; phosphate transport system substrate-binding protein
D lin2641 similar to phosphate ABC transporter (permease protein) K02037 pstC; phosphate transport system permease protein
D lin2640 similar to phosphate ABC transporter (permease protein) K02038 pstA; phosphate transport system permease protein
D lin2638 similar to phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D lin2639 similar to phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D lin0840 similar to Glutamine ABC transporter (binding and transport protein) K10036 glnH; glutamine transport system substrate-binding protein
D lin0841 similar to amino acid ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D lin2443 similar to amino acid ABC transporter (binding protein) K16957 tcyK; L-cystine transport system substrate-binding protein
D lin2442 similar to amino acid ABC-transporter (permease) K16958 tcyL; L-cystine transport system permease protein
D lin2441 similar to amino acid ABC transporter (permease) K16959 tcyM; L-cystine transport system permease protein
D lin2440 similar to amino acid ABC-transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D lin2352 similar to amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D lin2353 similar to amino acid ABC transporter (ATP-binding protein) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D lin0313 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D lin2512 conserved lipoprotein (putative ABC transporter binding protein) K02073 metQ; D-methionine transport system substrate-binding protein
D lin0311 similar to ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D lin2513 similar to ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D lin0312 similar to ABC transporter (ATP-binding protein) K02071 metN; D-methionine transport system ATP-binding protein
D lin2514 similar to ABC transporter (ATP-binding protein) K02071 metN; D-methionine transport system ATP-binding protein
D lin0200 similar to ABC transporter oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D lin2300 similar to pheromone ABC transporter (binding protein) K15580 oppA; oligopeptide transport system substrate-binding protein
D lin2299 similar to oligopeptide ABC transporter (permease) K15581 oppB; oligopeptide transport system permease protein
D lin2298 similar to oligopeptide ABC transporter (permease) K15582 oppC; oligopeptide transport system permease protein
D lin2297 similar to oligopeptide ABC transporter (ATP-binding protein) K15583 oppD; oligopeptide transport system ATP-binding protein
D lin2296 similar to oligopeptide ABC transporter (ATP-binding protein) K10823 oppF; oligopeptide transport system ATP-binding protein
D lin1961 similar to adhesion binding proteins and lipoproteins with multiple specificity for metal cations (ABC transporter) K19975 mntC; manganese transport system substrate-binding protein
D lin1962 similar metal cations ABC transporter (permease protein) K19976 mntB; manganese transport system permease protein
D lin1963 similar to metal cations ABC transporter, ATP-binding proteins K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D lin0191 similar to a probable high-affinity zinc ABC transporter (Zn(II)-binding lipoprotein) K09815 znuA; zinc transport system substrate-binding protein
D lin1779 similar to ABC transporter and adhesion proteins K09815 znuA; zinc transport system substrate-binding protein
D lin0193 similar to high-affinity zinc ABC transporter (membrane protein) K09816 znuB; zinc transport system permease protein
D zurM metal (zinc) transport protein (ABC transporter, permease protein) K09816 znuB; zinc transport system permease protein
D lin0192 similar to high-affinity zinc ABC transporter (ATP-binding protein) K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D zurA metal (zinc) transport protein(ABC transporter, ATP-binding protein) K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D lin1168 similar to putative cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D lin1167 similar to cobalamin biosynthesis protein M K02007 cbiM; cobalt/nickel transport system permease protein
D cbiQ similar to cobalt transport protein Q K02008 cbiQ; cobalt/nickel transport system permease protein
D lin1170 similar to cobalt transport ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D lin0607 similar to proteins involved in biotin metabolism (BioY) K03523 bioY; biotin transport system substrate-specific component
D lin2748 highly similar to B. subtilis YbaF protein K16785 ecfT; energy-coupling factor transport system permease protein
D lin2783 similar to B. subtilis YbaF protein K16785 ecfT; energy-coupling factor transport system permease protein
D lin2750 similar to ABC transporter (ATP-binding protein) K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D lin2749 similar to ABC transporter (ATP-binding protein) K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D lin0986 similar to Streptococcus agalactiae CylB protein K11051 cylB; multidrug/hemolysin transport system permease protein
D lin0985 similar to antibiotic ABC transporter, ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D lin1062 highly similar to teichoic acid translocation permease protein TagG K09692 tagG; teichoic acid transport system permease protein
D lin1063 similar to teichoic acid translocation ATP-binding protein TagH (ABC transporter) K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D lin2470 similar to putative ABC-transporter transmembrane subunit K09813 hrtB; hemin transport system permease protein
D lin2726 conserved hypothetical protein K09813 hrtB; hemin transport system permease protein
D lin2471 similar to ABC-transporter ATP binding proteins K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D lin2725 similar to ABC transporter, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D lin2220 similar to ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D lin1857 similar to ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D lin1859 similar to ABC transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D lin2219 similar to ABC transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D ftsX highly similar to cell-division protein FtsX K09811 ftsX; cell division transport system permease protein
D ftsE highly similar to the cell-division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D lin2341 lin2341 K16919 ytrC_D; acetoin utilization transport system permease protein
D lin2911 hypothetical membrane protein K16919 ytrC_D; acetoin utilization transport system permease protein
D lin2342 similar to ABC transporter (ATP-binding protein) K16921 ytrB; acetoin utilization transport system ATP-binding protein
D lin2912 similar to ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D lin1692 similar to ABC transporter (ATP-binding protein) K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0156 similar to ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin1691 similar to ABC transporter (ATP-binding protein) K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0155 similar to ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin2888 similar to ABC transporter (ATP-binding protein) K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D lin2894 similar to ABC transporter, ATP-binding protein K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin2895 similar to ABC transporter, ATP-binding protein K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0616 similar to ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0617 similar to ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D cydD highly similar to ABC transporter (ATP-binding protein) required for expression of cytochrome BD K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D cydC highly similar to ABC transporter required for expression of cytochrome BD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D lin0920 similar to ABC transporter ATP-binding protein (antibiotic resistance) K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:lin02060]
D lin1002 phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D ptsH PTS phosphocarrier protein Hpr (histidine containing protein) K02784 ptsH; phosphocarrier protein HPr
D lin1016 similar to phosphotransferase system glucose-specific enzyme IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D lin0026 similar to PTS system, beta-glucosides specific enzyme IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D lin1223 similar to PTS system trehalose specific enzyme IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D lin2929 similar to phosphotransferase system mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D lin2931 similar to phosphotransferase system mannitol-specific enzyme IIBC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D lin2457 similar to PTS system, cellobiose-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2360 similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0329 similar to PTS beta-glucoside-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0872 similar to PTS system enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0917 similar to phosphotransferase system enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin1830 similar to phosphotransferase system (PTS) lichenan-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2908 similar to PTS cellobiose-specific enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2833 similar to cellobiose phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2472 similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2458 similar to PTS system, cellobiose-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0327 similar to PTS beta-glucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0393 similar to PTS betaglucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0873 similar to PTS system, beta-glucoside enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0914 similar to PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin1080 similar to PTS system, cellobiose-specific IIB component (cel A) K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin1831 similar to phosphotransferase system (PTS) lichenan-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2905 similar to PTS cellobiose-specific enzyme IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2831 similar to cellobiose phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0326 similar to PTS beta-glucoside-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0392 similar to PTS betaglucoside-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0874 similar to PTS system, Lichenan-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0900 similar to PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0915 similar to phosphotransferase system enzyme IIC (truncated, N-terminal end) K02761 celB; cellobiose PTS system EIIC component
D lin2459 similar to PTS system, cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin2832 similar to cellobiose phosphotransferase enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin2856 similar to PTS system, cellobiose-specific enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D lin2906 similar to PTS cellobiose-specific enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D lin0033 similar to PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D lin2105 similar to PTS mannose-specific enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0777 similar to mannose-specific phosphotransferase system (PTS) component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0020 similar to PTS system, fructose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0143 similar to PTS system mannose-specific, factor IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D lin0775 similar to mannose-specific phosphotransferase system (PTS) component IIC K02795 manY; mannose PTS system EIIC component
D lin0144 similar to PTS system mannose-specific, factor IIC K02795 manY; mannose PTS system EIIC component
D lin0022 similar to PTS system, fructose-specific IIC component K02795 manY; mannose PTS system EIIC component
D lin0774 similar to mannose-specific phosphotransferase system (PTS) component IID K02796 manZ; mannose PTS system EIID component
D lin0145 similar to PTS system mannose-specific, factor IID K02796 manZ; mannose PTS system EIID component
D lin0023 similar to PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D lin2110 similar to PTS mannose-specific enzyme IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D lin2109 similar to PTS mannose-specific enzyme IIC component K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D lin2108 similar to PTS mannose-specific enzyme IID component K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D lin0546 similar to PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D lin0547 similar to PTS system, glucitol/sorbitol-specific enzyme IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D lin0548 similar to PTS system, glucitol/sorbitol-specific enzyme II CII component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D lin2202 similar to PTS system galactitol-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin2816 similar to PTS system galactitol-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin0503 similar to PTS fructose-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin2815 similar to PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin0507 similar to PTS system, Galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin2201 similar to PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin2814 similar to PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D lin0508 similar to PTS system, Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D lin2200 similar to PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D lin2800 similar to mannitol-specific PTS enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D lin2799 similar to hypothetical PTS enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D lin2798 similar to hypothetical PTS enzyme IIC component K03475 ulaA; ascorbate PTS system EIIC component
D lin0423 similar to fructose-specific phosphotransferase enzyme IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin0448 similar to PTS fructose-specific enzyme IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D fruA highly similar to phosphotransferase system (PTS) fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin2240 similar to PTS system, fructose-specific enzyme IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin0377 similar to PTS system, fructose-specific enzyme IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin0422 similar to fructose-specific phosphotransferase enzyme IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D lin2241 similar to PTS system, fructose-specific enzyme IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D lin0446 similar to PTS fructose-specific enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin2242 similar to PTS system, fructose-specific enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin0376 similar to PTS system, enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin0421 similar to phosphotransferase system enzyme IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin2199 similar to 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D fruB fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:lin03070]
D lin1562 similar to protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D secE highly similar to preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE
D lin2545 similar to preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D secY highly similar to preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D lin1564 similar to unknown proteins K03210 yajC; preprotein translocase subunit YajC
D lin2986 highly similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin1416 similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin0592 similar to preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D secA translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D lin1917 similar to FtsY of E. coli and SRP receptor alpha-subunit K03110 ftsY; fused signal recognition particle receptor
D ffh similar to signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D lin0381 similar to conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D lin0380 similar to conserved hypothetical integral membrane protein K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lin02020]
D phoR two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D phoP two-component response phosphate regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D lin2642 similar to phosphate ABC transporter (binding protein) K02040 pstS; phosphate transport system substrate-binding protein
D lin0320 similar to heat-shock protein htrA serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D flaA flagellin protein K02406 fliC; flagellin
D lin0693 similar to motility protein (flagellar motor rotation) MotA K02556 motA; chemotaxis protein MotA
D lin2827 similar to the two components sensor protein kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D pli0050 similar to the two components sensor protein kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D lin2826 similar to two components response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D pli0051 similar to the two components response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D kdpA highly similar to potassium-transporting atpase a chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D pli0052 similar to potassium-transporting atpase a chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D kdpB potassium-transporting atpase b chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D pli0053 similar to potassium-transporting atpase b chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D kdpC potassium-transporting atpase c chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D pli0055 similar to potassium-transporting atpase c chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D resE similar to two-component sensor histidine kinase (ResE) K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D resD similar to two-component response regulator (ResD) K07775 resD; two-component system, OmpR family, response regulator ResD
D ctaA similar to heme O oxygenase K02259 COX15; heme a synthase [EC:1.17.99.9]
D lin0316 similar to two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D lin0315 similar to two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D dnaA Chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D lin1859 similar to ABC transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D lin2219 similar to ABC transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D lin2220 similar to ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D lin1857 similar to ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D lin1852 similar to two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D lin1856 similar to two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D dltA D-alanine-activating enzyme (dae), D-alanine-D-alanyl carrier protein ligase (dcl) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D dltB DltB protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid K03739 dltB; membrane protein involved in D-alanine export
D dltC D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D dltD DltD protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid K03740 dltD; D-alanine transfer protein
D lin1803 similar to putative membrane proteins K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D lin1969 similar to similar to D-alanyl-D-alanine carboxypeptidases K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D lisK two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D lisR two-component response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D lin2029 similar to malolactic enzyme (malate dehydrogenase) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D lin0041 similar to Staphylococcus two-component sensor histidine kinase AgrB K07813 agrB; accessory gene regulator B
D lin0043 similar to sensor histidine kinase (AgrC from Staphylococcus) K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D lin0044 similar to 2-components response regulator protein (AgrA from Staphylococcus) K07707 agrA; two-component system, LytTR family, response regulator AgrA
D lin2659 similar to B. subtilis two-component response regulator DegU K07692 degU; two-component system, NarL family, response regulator DegU
D lin1020 similar to two-component sensor histidine kinase in particular B. subtilis YvqE protein K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D lin1021 similar to two-component response regulator, in particular B. subtilis YvqC protein K11618 liaR; two-component system, NarL family, response regulator LiaR
D lin1019 similar to B. subtilis YvqF protein K11622 liaF; lia operon protein LiaF
D glnA highly similar to glutamine synthetases K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D sigL RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
D lin0691 similar to chemotactic methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D lin0731 similar to metyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D cheA two-component sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D cheY Chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D lin0697 similar to CheA activity-modulating chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D lin2119 similar to two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D lin2118 similar to two-component response regulator K07720 yesN; two-component system, response regulator YesN
D cydA highly similar to cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D cydB highly similar to cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D lin0937 similar to protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D lin2681 similar to UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lin02024]
D lin1327 conserved hypothetical protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D lin1333 similar to host factor-1 protein K03666 hfq; host factor-I protein
D trpE highly similar to anthranilate synthase alpha subunit K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D trpG highly similar to anthranilate synthase beta subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D lin2826 similar to two components response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D pli0051 similar to the two components response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D lin2463 similar to glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin2528 highly similar to glutamate decarboxylases K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D lin2462 similar to amino acid antiporter (acid resistance) K20265 gadC; glutamate:GABA antiporter
D lin1174 similar to unknown proteins K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D lin1173 similar to unknown proteins K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D lin0041 similar to Staphylococcus two-component sensor histidine kinase AgrB K07813 agrB; accessory gene regulator B
D lin0043 similar to sensor histidine kinase (AgrC from Staphylococcus) K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D lin0044 similar to 2-components response regulator protein (AgrA from Staphylococcus) K07707 agrA; two-component system, LytTR family, response regulator AgrA
D lin0200 similar to ABC transporter oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D lin2300 similar to pheromone ABC transporter (binding protein) K15580 oppA; oligopeptide transport system substrate-binding protein
D lin2299 similar to oligopeptide ABC transporter (permease) K15581 oppB; oligopeptide transport system permease protein
D lin2298 similar to oligopeptide ABC transporter (permease) K15582 oppC; oligopeptide transport system permease protein
D lin2297 similar to oligopeptide ABC transporter (ATP-binding protein) K15583 oppD; oligopeptide transport system ATP-binding protein
D lin2296 similar to oligopeptide ABC transporter (ATP-binding protein) K10823 oppF; oligopeptide transport system ATP-binding protein
D lin0182 similar to oligopeptide ABC transport system substrate-binding proteins K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D lin0190 similar to oligopeptide ABC transporter-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D lin2714 similar to dipeptide ABC transporter (dipeptide-binding protein) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D lin0183 similar to oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D lin0184 similar to oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D lin0294 similar to transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D lin0543 similar to tagatose-1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D lin2986 highly similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin1416 similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D comK.1 competence transcription factor (C-terminal part) K02250 comK; competence protein ComK
D comK similar to competence transcription factor ComK, N terminal part K02250 comK; competence protein ComK
D lin1562 similar to protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D secE highly similar to preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE
D lin2545 similar to preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D secY highly similar to preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D lin1564 similar to unknown proteins K03210 yajC; preprotein translocase subunit YajC
D lin0592 similar to preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D secA translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D lin1917 similar to FtsY of E. coli and SRP receptor alpha-subunit K03110 ftsY; fused signal recognition particle receptor
D ffh similar to signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D lin2659 similar to B. subtilis two-component response regulator DegU K07692 degU; two-component system, NarL family, response regulator DegU
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:lin02030]
D lin0731 similar to metyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D cheA two-component sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D cheY Chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D lin0697 similar to CheA activity-modulating chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D lin0691 similar to chemotactic methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D lin0722 similar to flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D lin0707 similar to flagellar switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D lin0701 similar to flagellar motor switch protein fliY C-terminal part K02417 fliN; flagellar motor switch protein FliN
D lin0708 similar to flagellar motor switch protein fliY K02417 fliN; flagellar motor switch protein FliN
D lin0706 weakly similar to flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D lin0693 similar to motility protein (flagellar motor rotation) MotA K02556 motA; chemotaxis protein MotA
D motB similar to motility protein (flagellar motor rotation) MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:lin02040]
D lin0720 similar to flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D lin0721 similar to flagellar basal-body M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D lin0722 similar to flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D lin0723 lin0723 K02411 fliH; flagellar assembly protein FliH
D lin0724 similar to H+-transporting ATP synthase alpha chain FliI, flagellar-specific, - K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D lin0707 similar to flagellar switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D lin0701 similar to flagellar motor switch protein fliY C-terminal part K02417 fliN; flagellar motor switch protein FliN
D lin0708 similar to flagellar motor switch protein fliY K02417 fliN; flagellar motor switch protein FliN
D lin0706 weakly similar to flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D lin0684 similar to flagellar biosynthesic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D lin0685 similar to flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D lin0686 similar to flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D lin0688 similar to flagella-associated protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D lin0687 similar to flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D lin0718 similar to flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB
D lin0719 similar to flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D lin0704 similar to flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D lin0705 similar to flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D lin0690 similar to flagellar hook-basal body protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D lin0713 similar to flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D lin0714 similar to flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D flaA flagellin protein K02406 fliC; flagellin
D lin0715 similar to flagellar hook-associated protein 2 FliD K02407 fliD; flagellar hook-associated protein 2
D lin0716 similar to hypothetical flagellar protein K02422 fliS; flagellar secretion chaperone FliS
D lin0693 similar to motility protein (flagellar motor rotation) MotA K02556 motA; chemotaxis protein MotA
D motB similar to motility protein (flagellar motor rotation) MotB K02557 motB; chemotaxis protein MotB
D rpoD RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D sigL RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D eno highly similar to enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D lin1172 similar to unknown protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells [PATH:lin05100]
D lin0372 probable cell surface protein (LPXTG motif) K13730 inlA; internalin A
D ami autolysin; amidase K13731 inlB; internalin B
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lin01501]
D lin0200 similar to ABC transporter oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D lin2300 similar to pheromone ABC transporter (binding protein) K15580 oppA; oligopeptide transport system substrate-binding protein
D lin2299 similar to oligopeptide ABC transporter (permease) K15581 oppB; oligopeptide transport system permease protein
D lin2298 similar to oligopeptide ABC transporter (permease) K15582 oppC; oligopeptide transport system permease protein
D lin2297 similar to oligopeptide ABC transporter (ATP-binding protein) K15583 oppD; oligopeptide transport system ATP-binding protein
D lin2296 similar to oligopeptide ABC transporter (ATP-binding protein) K10823 oppF; oligopeptide transport system ATP-binding protein
D lin0199 some similarities to probable beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D lin2888 similar to ABC transporter (ATP-binding protein) K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D pbpA similar to penicillin-binding protein 2A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D lin2331 similar to penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:lin01502]
D ddlA D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D lin0885 similar to alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D mraY similar to phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D murG similar to peptidoglycan synthesis enzymes, putative phospho-N-acetylmuramoyl-pentapeptide-transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D lin1969 similar to similar to D-alanyl-D-alanine carboxypeptidases K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lin01503]
D lin0176 similar to autolysin: N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D lin1556 similar to N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D lin0320 similar to heat-shock protein htrA serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D dltA D-alanine-activating enzyme (dae), D-alanine-D-alanyl carrier protein ligase (dcl) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D dltB DltB protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid K03739 dltB; membrane protein involved in D-alanine export
D dltC D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D dltD DltD protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid K03740 dltD; D-alanine transfer protein
D lin1803 similar to putative membrane proteins K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lin01000]
C 01001 Protein kinases [BR:lin01001]
D lin1934 similar to putative serine/threonine-specific protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D rsbT highly similar to positive regulation of sigma-B activity K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D rsbW sigma-B activity negative regulator RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D phoR two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D lin2827 similar to the two components sensor protein kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D pli0050 similar to the two components sensor protein kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D resE similar to two-component sensor histidine kinase (ResE) K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D lin0316 similar to two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D lin1852 similar to two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D lisK two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D lin1020 similar to two-component sensor histidine kinase in particular B. subtilis YvqE protein K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D lin0043 similar to sensor histidine kinase (AgrC from Staphylococcus) K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D cheA two-component sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D lin2119 similar to two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D lin1137 similar to two-component sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lin01009]
D lin1606 lin1606 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D lin0941 similar to heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D lin1935 similar to putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lin01002]
D lsp highly similar to signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D pepC aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D guaA highly similar to GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D lin1909 similar to unknown proteins K07010 K07010; putative glutamine amidotransferase
D iap P60 extracellular protein, invasion associated protein Iap K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D spl peptidoglycan lytic protein P45 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D lin0198 P45 related protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D purF glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D lin1845 similar to glutamate synthase (large subunit) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D lin0734 similar to L-glutamine-D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ansB.1 similar to asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D lin2358 similar to unknown proteins K05520 yhbO; deglycase [EC:3.5.1.124]
D lin0929 similar to sortase K07284 srtA; sortase A [EC:3.4.22.70]
D lin2285 similar to unknown protein K08600 srtB; sortase B [EC:3.4.22.71]
D lin0041 similar to Staphylococcus two-component sensor histidine kinase AgrB K07813 agrB; accessory gene regulator B
D lin0997 similar to hypothetical protein K07052 K07052; CAAX protease family protein
D lin2176 similar to unknown proteins K07052 K07052; CAAX protease family protein
D lin2232 lin2232 K07052 K07052; CAAX protease family protein
D lin2292 similar to oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D lin1969 similar to similar to D-alanyl-D-alanine carboxypeptidases K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D lin0128 L-alanoyl-D-glutamate peptidase [Bacteriophage A500 from Listeria] K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D lin2556 similar to dipeptidases K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D lin1661 similar to Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D lin0289 similar to succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D lin1892 similar to aminotripeptidase (peptidase T) K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D lin1412 similar to aminotripeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D lin1011 similar to N-acyl-L-amino acid amidohydrolases K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D lin0541 similar to N-carbamyl-L-amino acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D lin1821 similar to methionine aminopeptidases K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D lin1613 similar to X-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D lin1391 similar to aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D lin1823 highly similar to aminopeptidases K19689 ampS; aminopeptidase [EC:3.4.11.-]
D lin1644 similar to aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D lin1999 similar to probable thermostable carboxypeptidases K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D ftsH highly similar to cell division protein ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D lin0981 similar to glucanase and peptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D lin0962 similar to putative heat shock protein HtpX, Listeria epitope LemB K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D lin1355 conserved hypothetical protein similar to B. subtilis YluC protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D lin0201 similar to dipeptide ABC transporter K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D lin1229 lin1229 K24131 prsW; protease PrsW [EC:3.4.-.-]
D lin0320 similar to heat-shock protein htrA serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D lin2897 similar to D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D lin1103 similar to ATP-dependent Clp protease proteolytic component K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D clpP ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D lin2157 weakly similar to proteases K07177 K07177; Lon-like protease
D lin1340 highly similar to SOS response regulator lexA, transcription repressor protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D lin1308 similar to type-I signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D lin1309 similar to signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D lin1310 similar to signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D lin1965 similar to carboxy-terminal processing proteinase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D lin1627 similar to proteases K04773 sppA; protease IV [EC:3.4.21.-]
D lin0382 similar to Salmonella typhimurium peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D lin1374 similar to B. subtilis yqgP K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D lin1679 similar to unknown proteins K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D lin2577 similar to protease [bacteriophage bIL285] K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D clpQ highly similar to beta-type subunit of the 20S proteasome K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D lin0960 similar to proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:lin01003]
D lin2700 weakly similar to human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D lin2699 similar to galactosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D pbpA similar to penicillin-binding protein 2A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D lin2331 similar to penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D lin2665 similar to B. subtilis TagA protein involved in polyglycerol phosphate biosynthesis K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D lin0958 similar to undacaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D lin2663 similar to B. subtilis TagO teichoic acid linkage unit synthesis protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D lin0635 similar to unknown protein K25620 gtlB; lipoteichoic acid galactosyltransferase
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lin01005]
D lin2695 similar to glycosyl transferases K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D lin1066 similar to dolichol phosphate mannose synthase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D lin0958 similar to undacaprenyl-phosphate N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D lin2663 similar to B. subtilis TagO teichoic acid linkage unit synthesis protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lin01011]
D murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D murZ highly similar to UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D lin1459 weakly similar to UDP-N-acetylglucosaminyl-3-enolpyruvate reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D murC similar to UDP-N-acetyl muramate-alanine ligases K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D murD similar to UDP-N-acetylmuramoylalanine D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D murE similar to UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ddlA D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D lin0885 similar to alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D racE similar to glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D lin1679 similar to unknown proteins K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D mraY similar to phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D murG similar to peptidoglycan synthesis enzymes, putative phospho-N-acetylmuramoyl-pentapeptide-transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D lin2125 similar to unknown proteins K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D lin1664 similar to unknown proteins K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D pbpA similar to penicillin-binding protein 2A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D lin2331 similar to penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D pbpB similar to penicillin-binding protein 2B K08724 pbpB; penicillin-binding protein 2B
D lin1477 similar to penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D lin0461 similar to penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) K21467 pbpC; penicillin-binding protein 3
D lin2897 similar to D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D lin1969 similar to similar to D-alanyl-D-alanine carboxypeptidases K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D iap P60 extracellular protein, invasion associated protein Iap K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D spl peptidoglycan lytic protein P45 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D lin0128 L-alanoyl-D-glutamate peptidase [Bacteriophage A500 from Listeria] K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D lin0929 similar to sortase K07284 srtA; sortase A [EC:3.4.22.70]
D lin2285 similar to unknown protein K08600 srtB; sortase B [EC:3.4.22.71]
D lin1534 similar to unknown proteins K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D lin0176 similar to autolysin: N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D lin1556 similar to N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:lin01004]
D fabD similar to malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D lin2305 similar to 3-oxoacyl-acyl-carrier protein synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D lin2304 similar to 3-oxoacyl-acyl-carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D fabG similar to 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin1431 similar to 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin2948 similar to reductases K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D lin2668 similar to hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D lin0969 similar to enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D lin0810 similar to oxidoreductases K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D lin1796 similar to glucose 1-dehydrogenase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D lin2868 similar to acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D plsX similar to plsX protein involved in fatty acid/phospholipid synthesis K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D lin1323 conserved hypothetical protein, similar to B. subtilis YneS protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D lin1688 similar to 1-acylglycerol-3-phosphate O-acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:lin01006]
D lin1400 similar to geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D lin2046 similar to heptaprenyl diphosphate synthase component I K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D lin2044 similar to heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D lin1352 similar to undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D miaA similar to tRNA isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D lin1785 similar to menaquinone biosynthesis proteins K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D ctaB highly similar to heme A farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:lin01007]
D gltX highly similar to glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D tyrS tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D trpS tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D cysS cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D argS arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D metS methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D ileS isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D valS valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D leuS leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D lysS lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D aspS aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ansB.2 similar to asparaginyl-tRNA synthetases K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D hisS histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D glyQ similar to glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D glyS similar to glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D serS seryl-trna synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D proS prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D thrS threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D alaS alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D pheS phenylalany-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D pheT.1 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D aspB similar to aspartate aminotransferases K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D lin0314 similar to aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D lin1005 similar to aminotransferases (to B. subtilis PatA protein) K00841 patA; aminotransferase [EC:2.6.1.-]
D hisC similar to histidinol-phosphate aminotransferase and tyrosine/phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D lin2469 similar to aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D argD highly similar to N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D gsaB glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D hemL highly similar to glutamate-1-semialdehyde 2,1-aminotransferases K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D daaA D-Amino Acid Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D lin0977 similar to branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D lin2893 similar to para-aminobenzoate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D serC highly similar to phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lin00194]
D lin0139 similar to ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D atpC highly similar to H+-transporting ATP synthase chain epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D lin0138 similar to ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D atpD highly similar to H+-transporting ATP synthase chain beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D lin0137 similar to ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D atpG highly similar to H+-transporting ATP synthase chain gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D lin0136 similar to ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D atpA highly similar to H+-transporting ATP synthase chain alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D lin0135 weakly similar to ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D atpH highly similar to H+-transporting ATP synthase chain delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D atpF highly similar to H+-transporting ATP synthase chain b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D lin0134 similar to ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D atpE highly similar to H+-transporting ATP synthase chain c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D atpB highly similar to H+-transporting ATP synthase chain a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D atpI highly similar to ATP synthase subunit i K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lin03000]
D lin1814 similar to putative AraC-type regulators K13652 K13652; AraC family transcriptional regulator
D lin0068 similar to E. coli Ada protein (O6-methylguanine-DNA methyltransferase) K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D lin2345 similar to methylphosphotriester-DNA alkyltransferase and transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D gltC transcription activator of glutamate synthase operon GltC K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D lin2446 similar to LysR family transcription regulator K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon
D lin2431 similar to regulatory protein DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D lin0400 similar to B. subtilis transcription repressor of myo-inositol catabolism operon IolR K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
D lin2212 similar to transcriptional regulator (DeoR family) K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D lin1979 similar to conserved hypothetical proteins K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D ccpA catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D lin2102 similar to transcription regulators (LacI family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D lin1838 similar to transcription regulators (LacI family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D lin0851 similar to transcription regulator lacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D lin0030 transcriptional regulator LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D lin1221 similar to transcription regulator GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D lin0584 similar to transcription regulator GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D lin0901 similar to transcription regulator (GntR family) K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D lin0390 similar to transcription regulator (GntR family) K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D lin0957 similar to transcription regulator (GntR family) K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D lin2343 similar to transcriptional regulators (GntR family) K07979 ytrA; GntR family transcriptional regulator
D lin2076 similar to transcription regulators (TetR family) K09017 rutR; TetR/AcrR family transcriptional regulator
D lin0988 similar to regulatory proteins (MarR family) K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D lin2303 similar to transcription regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D lin1188 similar to transcriptional regulator (MarR family). K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D glnR similar to glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D lin2876 similar to transcription regulator MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D fur similar to transcriptional regulator (Fur family) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D zurR transcriptional regulator ZurR (ferric uptake regulation) K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D lin1791 similar to transcription regulators (Fur family), PerR in B. subtilis K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D lin1550 similar to unknown protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D pli0034 similar to arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D pli0036 similar to arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D pli0060 similar to cadmium resistance accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D lin2636 similar to transcription regulator ArsR family K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D lin1445 similar to unknown proteins K26741 ladR; PadR family transcriptional regulator, multidrug transcriptional repressor LadR
D lin0727 similar to unknown protein K10947 K10947; PadR family transcriptional regulator
D lin0608 conserved hypothetical protein K10947 K10947; PadR family transcriptional regulator
D lin1991 similar o transcriptional regulators K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D birA similar to transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D lin0231 similar to PurR, transcription repressor of purine operon of B. subtilis K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D lin2178 similar to a putative DNA binding proteins K01926 rex; redox-sensing transcriptional repressor
D codY highly similar to B. subtilis CodY protein K03706 codY; transcriptional pleiotropic repressor
D lin1448 lin1448 K07727 K07727; putative transcriptional regulator
D lin0437 similar to putative transcription regulator K07729 K07729; putative transcriptional regulator
D lin0886 similar to B. subtilis YdcD protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D lin2530 similar to transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D lin2801 similar to transcriptional antiterminator K03483 mtlR; mannitol operon transcriptional activator
D lin0325 similar to transcriptional antiterminator (BglG family) K03491 licR; probable licABCH operon transcriptional regulator
D lin0919 similar to transcription antiterminator BglG family K03491 licR; probable licABCH operon transcriptional regulator
D lin2455 similar to transcription antiterminator BglG family K03491 licR; probable licABCH operon transcriptional regulator
D lin1968 similar to conserved hypothetical proteins K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D lin1654 similar to unknown proteins K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D lin0211 similar to B. subtilis transcription regulatory protein AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D parB Partition protein ParB homolg K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D lin2926 highly similar to B. subtilis DNA-binding protein Spo0J-like homolog YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D lin1442 similar to putative anti-terminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D lin1404 similar to arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D hrcA transcription repressor of class I heat-shock gene HrcA K03705 hrcA; heat-inducible transcriptional repressor
D lin0340 similar to thiamin biosynthesis protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D lin0261 highly similar to transcription repressor of class III stress genes (CtsR) K03708 ctsR; transcriptional regulator of stress and heat shock response
D lin2628 similar to B. subtilis yvlC protein K03973 pspC; phage shock protein C
D lin2554 similar to B. subtilis CggR hypothetical transcriptional regulator K05311 cggR; central glycolytic genes regulator
D lin2104 similar to transcription repressor of dra/nupC/pdp operon DeoR K05346 deoR; deoxyribonucleoside regulator
D pyrR highly similar to pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D lin1597 similar to unknown protein K07738 nrdR; transcriptional repressor NrdR
D comK.1 competence transcription factor (C-terminal part) K02250 comK; competence protein ComK
D comK similar to competence transcription factor ComK, N terminal part K02250 comK; competence protein ComK
D lin2148 similar to unknown proteins K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lin03021]
D lin0195 similar to ATP dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D rpoA highly similar to RNA polymerase (alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D rpoB RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D rpoC RNA polymerase (beta' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D lin2705 similar to B. subtilis RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D lin1940 lin1940 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D rpoD RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D lin0443 similar to RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D sigB RNA polymerase sigma-37 factor (sigma-B) K03090 sigB; RNA polymerase sigma-B factor
D sigH RNA polymerase sigma-30 factor (sigma-H) K27000 sigH; RNA polymerase sigma-H factor
D sigL RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
D lin2397 similar to sigma factor-like positive control protein of B. subtilis K24072 xpf; positive control factor
D nusA highly similar to N utilization substance protein A (NusA protein) K02600 nusA; transcription termination/antitermination protein NusA
D lin1396 similar to transcription termination protein (NusB) K03625 nusB; transcription antitermination protein NusB
D nusG transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D rsbT highly similar to positive regulation of sigma-B activity K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D rsbS highly similar to negative regulation of sigma-B activity K17762 rsbS; rsbT antagonist protein RsbS
D lin0204 lin0204 K17763 rsbR; rsbT co-antagonist protein RsbR
D RsbR highly similar to positive regulator of sigma-B activity K17763 rsbR; rsbT co-antagonist protein RsbR
D rsbU highly similar to serine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D rsbX Indirect negative regulation of sigma B dependant gene expression (serine phosphatase) K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
D rsbV anti-anti-sigma factor (antagonist of RsbW) K04749 rsbV; anti-sigma B factor antagonist
D rsbW sigma-B activity negative regulator RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D lin1531 similar to transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D rho highly similar to transcription terminator factor rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:lin03019]
D lin1578 similar to ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D rncS similar to ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D lin1026 similar to conserved hypothetical proteins (in particular B. subtilis YkqC) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D lin1473 similar to unknown proteins K12574 rnj; ribonuclease J [EC:3.1.-.-]
D lin1436 similar to unknown protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D lin2543 similar to exoribonuclease RNase-R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D lin2323 similar to S. aureus Cbf1 protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D lin0859 similar to ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D lin1214 similar to ATP-dependent RNA helicase (DEAD motif) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D lin1488 similar to ATP-dependent RNA helicase, DEAD-box family (deaD) K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D lin2900 similar to ATP-dependent DNA helicases K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D recS similar to ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D eno highly similar to enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D pnpA polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D rho highly similar to transcription terminator factor rho K03628 rho; transcription termination factor Rho
D lin1606 lin1606 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D dnaK class I heat-shock protein (molecular chaperone) DnaK K04043 dnaK; molecular chaperone DnaK
D groEL class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D lin1333 similar to host factor-1 protein K03666 hfq; host factor-I protein
D lin2617 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:lin03011]
D lin2052 similar to similar to ribosomal protein S1 like protein K02945 RP-S1; small subunit ribosomal protein S1
D rpsB 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D rpsC ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D rpsD ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D rpsE ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D rpsF ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D rpsG ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D rpsH ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D rpsI ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D rpsJ ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D rpsK ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D rpsL ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D rpsM ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D lin1995 similar to ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D rpsN ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D rpsO ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D rpsP ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D rpsQ ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D rpsR ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D rpsS ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D rpsT ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D rpsU 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D rplA ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D rplB ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D rplC ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D rplD ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D rplE ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D rplF ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D rplI 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D rplJ ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D rplK ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D rplL ribosomal protein L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D rplM ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D rplN ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D rplO ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D rplP ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D rplQ ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D rplR ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D rplS ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D rplT ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D rplU ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D rplV ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D rplW ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D rplX ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D rpmA ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D rpmB ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D rpmC ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D rpmD ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D rpmE ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D rpmF.2 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D rpmF.1 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D rpmG ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D lin0276 50S ribosomal protein K02913 RP-L33; large subunit ribosomal protein L33
D rpmH ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D rpmI ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D rpmJ ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D ctc similar to B. subtilis general stress protein K02897 RP-L25; large subunit ribosomal protein L25
D rRNA-5s-1 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-2 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-3 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-4 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-5 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-6 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-16s-2 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-1 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-3 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-4 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-5 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-6 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-23s-1 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-2 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-3 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-4 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-5 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-6 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lin03009]
D rncS similar to ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D lin1499 similar to GTP binding proteins K03595 era; GTPase
D lin1572 conserved GTP binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D nusA highly similar to N utilization substance protein A (NusA protein) K02600 nusA; transcription termination/antitermination protein NusA
D lin1396 similar to transcription termination protein (NusB) K03625 nusB; transcription antitermination protein NusB
D nusG transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D lin2436 similar to 16S pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D ksgA dimethyladenosine transferase (16S rRNA dimethylase) K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D lin1936 similar to RNA-binding Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D lin0284 conserved hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D lin2159 similar to unknown proteins K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D lin1507 similar to unknown proteins K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D gidB GidB protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D lin2147 similar to unknown proteins K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D lin0210 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D lin1403 conserved hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D lin1986 similar to methyltransferases K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D lin0273 similar to conserved hypothetical proteins like to B. subtilis YacO protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D lin0321 conserved hypothetical protein, highly similar to B. subtilis YydA proteinYyd K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D lin0590 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D lin0484 similar to conserved hypothetical proteins, highly similar to B. subtilis YloN protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D lin1863 similar to hypothetical RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D lin2063 similar to unknown proteins K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D lin1957 similar to conserved hypothetical proteins K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D lin2346 similar to putative ribosomal large subunit pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D lin0968 similar to ribosomal large subunit pseudouridine synthetase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D lin2182 similar to ribosomal protein alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D lin1806 similar to ribosomal-protein-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D lin1907 similar to putative 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D lin1508 similar to ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D lin1578 similar to ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D lin1537 similar to unknown proteins K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D lin0272 highly similar to B. subtilis YazC protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D lin0859 similar to ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D lin1214 similar to ATP-dependent RNA helicase (DEAD motif) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D lin1488 similar to ATP-dependent RNA helicase, DEAD-box family (deaD) K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D lin1933 similar to unknown proteins K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D lin1369 similar to conserved hypothetical proteins K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D lin2051 similar to unknown protein K03977 engA; GTPase
D lin1311 conserved hypothetical protein similar to B. subtilis YlqF protein K14540 rbgA; ribosome biogenesis GTPase A
D lin0756 similar to ATP/GTP-binding protein K03665 hflX; GTPase
D lin1334 conserved hypothetical protein similar to B. subtilis YnbA protein K03665 hflX; GTPase
D lin1526 similar to unknown proteins K06948 yqeH; 30S ribosome assembly GTPase
D lin2685 similar to yeast translation initiation protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D relA similar to (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D rbfA highly similar to ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D lin1358 conserved hypothetical protein, similar to B. subtilis YlxS protein K09748 rimP; ribosome maturation factor RimP
D lin0004 similar to B. subtilis YaaA protein K14761 rlbA; ribosome-associated protein
D lin1521 lin1521 K09710 ybeB; ribosome-associated protein
D lin1502 similar to unknown proteins K07042 ybeY; probable rRNA maturation factor
D lin1524 similar to unknown proteins K07574 yhbY; RNA-binding protein
D lin2655 similar to conserved hypothetical proteins like to B. subtilis YvyD protein K05808 hpf; ribosome hibernation promoting factor
D lin2919 similar to probable GTP-binding protein K06942 ychF; ribosome-binding ATPase
D lin2154 similar to unknown proteins K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lin03016]
D lin2084 similar to unknown proteins K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D cca similar to tRNA CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D proS prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ileS isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D leuS leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D metS methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D argS arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D lysS lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D aspS aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D alaS alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ansB.2 similar to asparaginyl-tRNA synthetases K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D thrS threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D serS seryl-trna synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D cysS cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D valS valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D hisS histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D pheS phenylalany-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D pheT.1 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D tyrS tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D trpS tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D lin1557 similar to unknown proteins K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D lin2319 similar to histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D lin1656 similar to unknown proteins K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D truA highly similar to pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D truB highly similar to tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D lin2130 similar to a NifS-like protein required for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1635 similar to iron-sulfur cofactor synthesis protein nifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1548 similar to iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin2685 similar to yeast translation initiation protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D miaA similar to tRNA isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D lin2943 similar to GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D gidA highly similar to GidA protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D rnpA ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D lin1201 similar to ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D glyQ similar to glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D glyS similar to glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D gltX highly similar to glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D lin0783 similar to transcription regulator (EbsC from Enterococcus faecalis) K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D lin2867 conserved hypothetical proteins K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D lin0259 conserved hypothetical protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D gid similar glucose inhibited division protein A K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D trmD similar to E. coli tRNA (guanine-N1) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D lin1490 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D lin1181 similar to rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D lin1547 similar to putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D lin1566 similar to S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D lin0933 similar to B. subtilis YhbA protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D lin1565 similar to tRNA-guanine transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D lin1634 similar to thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D lin0251 fusion protein, N-terminal part similar to B. subtilis YacA protein, C-terminal part similar to hypoxanthine-guanine phosphoribosyltransferase K15780 tilS-hprT; bifunctional protein TilS/HprT [EC:6.3.4.19 2.4.2.8]
D lin2183 similar to glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D lin2181 similar to glycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D lin2184 similar to unknown proteins K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D lin2155 similar to unknown proteins K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D lin2543 similar to exoribonuclease RNase-R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D pnpA polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:lin03012]
D infB highly similar to translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D infC translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D lin2179 similar to ABC transporter (ATP-binding protein) K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D tsf translation elongation factor K02357 tsf; elongation factor Ts
D tufA highly similar to translation elongation factor EF-Tu K02358 tuf; elongation factor Tu
D fus highly similar to translation elongation factor G K02355 fusA; elongation factor G
D prf1 highly similar to peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D frr highly similar to ribosome recycling factors K02838 frr; ribosome recycling factor
D lin2686 similar to protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D pth similar to peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D infA highly similar to initiation factor IF-I K02518 infA; translation initiation factor IF-1
D efp highly similar to elongation factor P (EF-P) K02356 efp; elongation factor P
D prfB highly similar to peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D lin0987 similar to peptide chain release factor 3 (RF-3) K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lin03110]
D clpB similar to endopeptidase Clp ATP-binding chain B (ClpB) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D clpC endopeptidase Clp ATP-binding chain C K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D clpE ATP-dependent protease K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D clpX ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D clpY highly similar to ATP-dependent Clp protease-like proteins K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D lin0941 similar to heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D dnaK class I heat-shock protein (molecular chaperone) DnaK K04043 dnaK; molecular chaperone DnaK
D groEL class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnaJ heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D lin0254 conserved hypothetical protein K04083 hslO; molecular chaperone Hsp33
D grpE heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D groES class I heat-shock protein (chaperonin) GroES K04078 groES; chaperonin GroES
D lin0320 similar to heat-shock protein htrA serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ftsH highly similar to cell division protein ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D atpB highly similar to H+-transporting ATP synthase chain a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D lin2475 similar to peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D lin2322 similar to post-translocation molecular chaperone K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D lin1482 similar to protein secretion PrsA (post-translocation molecular chaperone) K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D trxA thioredoxin K03671 TXN; thioredoxin
D lin2256 similar to thioredoxin K03671 TXN; thioredoxin
D lin2438 similar to B. subtilis YtnI protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:lin04131]
D ndk similar to nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D pli0037 similar to arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D lin2123 similar to alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D lin2122 similar to putative sugar hydrolases K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D gap highly similar to glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D lin2308 similar to phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D pykA highly similar to pyruvate kinases K00873 PK; pyruvate kinase [EC:2.7.1.40]
D lin0941 similar to heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D lin1456 highly similar to B. subtilis YxiO protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:lin04121]
C 03051 Proteasome [BR:lin03051]
D lin0941 similar to heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:lin03032]
D lin1993 similar to similar to RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D hup similar to non-specific DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D dnaA Chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D dnaC highly similar to replicative DNA helicases K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D lin1245 similarities Staphylococcus aureus prophage phiPV83 K02315 dnaC; DNA replication protein DnaC
D lin1752 similarities Staphylococcus aureus prophage phiPV83 K02315 dnaC; DNA replication protein DnaC
D dnaG DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D dnaB chromosome replication initiation / membrane attachment protein DnaB K03346 dnaB; replication initiation and membrane attachment protein
D dnaI primosome component (helicase loader) DnaI K11144 dnaI; primosomal protein DnaI
D ssb highly similar to single-strand binding protein (SSB) K03111 ssb; single-strand DNA-binding protein
D lin0097 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2667 similar to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2402 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D dnaE highly similar to DNA polymerase III (alpha subunit) DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D polC highly similar to DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D dnaN DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D lin1516 similar to unknown protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D lin0205 similar to B. subtilis DNA polymerase III (delta' subunit) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D dnaX highly similar to DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D rnhB similar to ribonuclease H rnh K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D rnhC similar to B. subtilis ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D polA DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D lin1870 similar to DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D lin1994 similar to 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D lin0088 similar to site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D gyrA DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D gyrB DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D parC highly similar to DNA gyrase-like protein (subunit A) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D parE highly similar to DNA gyrase-like protein (subunit B) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D topA highly similar to DNA topoisomerase I TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lin03036]
D rncS similar to ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D hup similar to non-specific DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D dnaA Chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D fri non-heme iron-binding ferritin K04047 dps; starvation-inducible DNA-binding protein
D lin1333 similar to host factor-1 protein K03666 hfq; host factor-I protein
D smc similar to Smc protein essential for chromosome condensation and partition K03529 smc; chromosome segregation protein
D lin2065 similar to unknown proteins K05896 scpA; segregation and condensation protein A
D lin2064 similar to unknown proteins K06024 scpB; segregation and condensation protein B
D ftsA highly similar to cell-division protein FtsA K03590 ftsA; cell division protein FtsA
D lin0249 similar to B. subtilis DivIC protein K13052 divIC; cell division protein DivIC
D ftsE highly similar to the cell-division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D lin1423 similar to DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D lin1647 similar to DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D lin0054 highly similar to B. subtilis YukA protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D ftsL similar to cell-division protein FtsL K03586 ftsL; cell division protein FtsL
D divIB similar to cell-division initiation protein divIB K03589 ftsQ; cell division protein FtsQ
D lin1059 similar to cell-division protein RodA and FtsW K03588 ftsW; cell division protein FtsW
D ftsX highly similar to cell-division protein FtsX K09811 ftsX; cell division transport system permease protein
D ftsZ highly similar to cell-division initiation protein FtsZ K03531 ftsZ; cell division protein FtsZ
D lin1192 similar to B. subtilis YshA protein K09888 zapA; cell division protein ZapA
D lin0176 similar to autolysin: N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D lin1556 similar to N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D lin1636 similar to B. subtilis negative regulator of FtsZ ring formation (EzrA) K06286 ezrA; septation ring formation regulator
D minC similar to cell-division inhibition (septum placement) protein MinC K03610 minC; septum site-determining protein MinC
D minD highly similar to cell division inhibitor (septum placement) protein MinD K03609 minD; septum site-determining protein MinD
D divIVA similar to cell-division initiation protein (septum placement) K04074 divIVA; cell division initiation protein
D lin2136 similar to unknown proteins K09772 sepF; cell division inhibitor SepF
D mreB similar to cell-shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D lin1825 similar to cell-shape determining proteins K03569 mreB; rod shape-determining protein MreB and related proteins
D mbl similar to MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D mreC similar to cell-shape determining protein MreC K03570 mreC; rod shape-determining protein MreC
D mreD similar to cell-shape determining protein MreD K03571 mreD; rod shape-determining protein MreD
D lin2521 similar to cell division proteins RodA, FtsW K05837 rodA; rod shape determining protein RodA
D lin2522 similar to cell division proteins RodA, FtsW K05837 rodA; rod shape determining protein RodA
D parA Partition protein, ParA homolog K03496 parA; chromosome partitioning protein
D parB Partition protein ParB homolg K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D lin2926 highly similar to B. subtilis DNA-binding protein Spo0J-like homolog YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D parC highly similar to DNA gyrase-like protein (subunit A) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D parE highly similar to DNA gyrase-like protein (subunit B) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D gidA highly similar to GidA protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D gidB GidB protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D gid similar glucose inhibited division protein A K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D codV similar to integrase/recombinase K03733 xerC; integrase/recombinase XerC
D lin2069 similar to integrase/recombinase K04763 xerD; integrase/recombinase XerD
D lin2737 similar to ATP binding proteins K03593 mrp; ATP-binding protein involved in chromosome partitioning
D pli0008 similar to unknown protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D lin1593 similar to hypothetical GTP binding protein K03978 engB; GTP-binding protein
D lin2615 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lin03400]
D lin0995 similar to methylated-DNA-protein-cystein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D lin0597 similar to DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D lin1190 similar to uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D lin0408 similar to uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D lin0928 similar to 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D lin1797 similar to A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D nth probable endonuclease III (DNA repair) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D lin0195 similar to ATP dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D lin1662 weakly similar to E. coli MutT protein (dGTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D lin1215 weakly similar to 8-oxo-dGTPase (mutT) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D lin2467 lin2467 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D lin1777 some similarity to hypothetical proteins K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D lin1799 similar to deoxyuridine triphosphate nucleotidohydrolases K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D lin0068 similar to E. coli Ada protein (O6-methylguanine-DNA methyltransferase) K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D lin2345 similar to methylphosphotriester-DNA alkyltransferase and transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D lin2344 similar to O6-methylguanine-DNA methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D lin1680 similar to dna-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D mutM highly similar to formamidopyrimidine-DNA glycosylases K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D lin1894 similar to 3'-exo-deoxyribonuclease exoA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D lin1487 similar to endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D lin1560 similar to single-stranded-DNA-specific exonuclease (RecJ) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D lin1870 similar to DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D polA DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D uvrA excinuclease ABC (subunit A) K03701 uvrA; excinuclease ABC subunit A
D uvrB excinuclease ABC (subunit B) K03702 uvrB; excinuclease ABC subunit B
D uvrC highly similar to excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D pcrA ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D rpoB RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D rpoC RNA polymerase (beta' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D rpoA highly similar to RNA polymerase (alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D lin2705 similar to B. subtilis RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D lin1940 lin1940 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D mfd transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D mutS DNA mismatch repair (recognition) K03555 mutS; DNA mismatch repair protein MutS
D lin1195 similar to MutS protein (MutS2) K07456 mutS2; DNA mismatch repair protein MutS2
D mutL DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D lin1398 similar to exodeoxyribonuclease VII (large subunit) K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D lin1399 similar to exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D dnaE highly similar to DNA polymerase III (alpha subunit) DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D polC highly similar to DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D dnaN DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D lin1516 similar to unknown protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D lin0205 similar to B. subtilis DNA polymerase III (delta' subunit) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D dnaX highly similar to DNA polymerase III (gamma and tau subunits) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ssb highly similar to single-strand binding protein (SSB) K03111 ssb; single-strand DNA-binding protein
D lin0097 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2667 similar to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2402 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin0088 similar to site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D lin1544 similar to exodeoxyribonuclease V K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D recA Recombination protein recA K03553 recA; recombination protein RecA
D ruvA highly similar to Holliday junction DNA helicase (ruvA) K03550 ruvA; holliday junction DNA helicase RuvA
D ruvB highly similar to Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D priA similar to primosomal replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D sbcC similar to ATP-dependent dsDNA exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D lin1687 similar to putative exonucleases SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D lin0265 similar to DNA repair protein Sms K04485 radA; DNA repair protein RadA/Sms
D RecF RecF protein K03629 recF; DNA replication and repair protein RecF
D lin1925 similar to ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D lin1497 similar to B. subtilis RecO protein involved in DNA repair and homologous recombination K03584 recO; DNA repair protein RecO (recombination protein O)
D recR highly similar to recombination protein recR K06187 recR; recombination protein RecR
D recN DNA repair and genetic recombination K03631 recN; DNA repair protein RecN (Recombination protein N)
D recU similar to DNA repair and homologous recombination protein K03700 recU; recombination protein U
D lin2368 similar to ATP-dependent deoxyribonuclease (subunit A) K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D addB similar to ATP-dependent deoxyribonuclease (subunit B) K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D gyrA DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D gyrB DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D topA highly similar to DNA topoisomerase I TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D hup similar to non-specific DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D lin0085 putative recombinase [Bacteriophage A118] K07455 recT; recombination protein RecT
D lin2413 highly similar to putative recombinase [Bacteriophage A118] K07455 recT; recombination protein RecT
D lin2900 similar to ATP-dependent DNA helicases K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D recS similar to ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D lin2082 similar to E. coli DNA-damage-inducible protein dinP K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D pli0067 similar to UV-damage repair protein K03502 umuC; DNA polymerase V
D lin2823 similar to UV-damage repair protein K03502 umuC; DNA polymerase V
D lin1340 highly similar to SOS response regulator lexA, transcription repressor protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D lin1801 similar to hypothetical proteins K03565 recX; regulatory protein
D lin1194 similar to DNA polymerase beta, to B. subtilis YshC protein K02347 polX; DNA polymerase (family X)
D dinG similar to ATP-dependent helicases K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D lin2259 similar to ribonucleoside-diphosphate reductase, subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D lin2258 similar to ribonucleoside-diphosphate reductase, subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D lin1610 similar to unknown proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lin03029]
D infB highly similar to translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D infC translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D tsf translation elongation factor K02357 tsf; elongation factor Ts
D tufA highly similar to translation elongation factor EF-Tu K02358 tuf; elongation factor Tu
D fus highly similar to translation elongation factor G K02355 fusA; elongation factor G
D lin1499 similar to GTP binding proteins K03595 era; GTPase
D tyrS tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D leuS leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D aspS aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D argS arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D gatA glutamyl-tRNA(Gln) amidotransferase (subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D gatB glutamyl-tRNA(Gln) amidotransferase (subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D gatC glutamyl-tRNA(Gln) amidotransferase (subunit C) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D ssb highly similar to single-strand binding protein (SSB) K03111 ssb; single-strand DNA-binding protein
D lin0097 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2667 similar to single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D lin2402 similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D dnaK class I heat-shock protein (molecular chaperone) DnaK K04043 dnaK; molecular chaperone DnaK
D grpE heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D groEL class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D groES class I heat-shock protein (chaperonin) GroES K04078 groES; chaperonin GroES
D dnaJ heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D lin2130 similar to a NifS-like protein required for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1635 similar to iron-sulfur cofactor synthesis protein nifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1548 similar to iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin2737 similar to ATP binding proteins K03593 mrp; ATP-binding protein involved in chromosome partitioning
D ctaB highly similar to heme A farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D ctaA similar to heme O oxygenase K02259 COX15; heme a synthase [EC:1.17.99.9]
D lin2986 highly similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin1416 similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin0941 similar to heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lin02000]
D lin1692 similar to ABC transporter (ATP-binding protein) K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0156 similar to ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin1691 similar to ABC transporter (ATP-binding protein) K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0155 similar to ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin2888 similar to ABC transporter (ATP-binding protein) K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D lin2894 similar to ABC transporter, ATP-binding protein K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin2895 similar to ABC transporter, ATP-binding protein K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0616 similar to ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0617 similar to ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D lin0829 similar to ABC transporter (ATP binding protein) K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D lin1097 similar to ABC transporters, ATP-binding proteins K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D cydD highly similar to ABC transporter (ATP-binding protein) required for expression of cytochrome BD K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D cydC highly similar to ABC transporter required for expression of cytochrome BD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D lin1098 similar to ABC transporters, ATP-binding proteins K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D lin0920 similar to ABC transporter ATP-binding protein (antibiotic resistance) K18231 msr; macrolide transport system ATP-binding/permease protein
D lin1989 similar to putative ABC transporters (ATP-binding protein) K15738 uup; ABC transport system ATP-binding/permease protein
D lin1033 similar to molybdate ABC transporter binding protein K02020 modA; molybdate transport system substrate-binding protein
D lin1032 similar to molybdenum ABC transporters (permease) K02018 modB; molybdate transport system permease protein
D lin1031 similar to ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D lin0800 similar to spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D lin0799 similar to spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D lin0798 similar to spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D lin0797 similar to spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D gbuC highly similar to glycine betaine ABC transporters (glycine betaine-binding protein) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pli0045 Pseudogene, similar to glycine-betaine binding (ABC transporter) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D gbuB highly similar to glycine betaine ABC transporters (permease) K02001 proW; glycine betaine/proline transport system permease protein
D gbuA highly similar to glycine betaine ABC transporter (ATP-binding protein) K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D lin1461 similar to glycine betaine/carnitine/choline ABC transporter (membrane protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D opuCC similar to glycine betaine/carnitine/choline ABC transporter (osmoprotectant-binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D opuCD similar to betaine/carnitine/choline ABC transporter (membrane p) K05846 opuBD; osmoprotectant transport system permease protein
D opuCB similar to glycine betaine/carnitine/choline ABC transporter (membrane protein) K05846 opuBD; osmoprotectant transport system permease protein
D opuCA similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D lin1460 similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D lin0304 similar to sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D lin2230 similar to maltose/maltodextrin ABC-transporter (binding protein) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D lin2229 similar to maltodextrin ABC-transport system (permease) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D lin2228 similar to maltodextrin ABC-transport system (permease) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D lin2115 weakly similar to putative sugar-binding lipoproteins K17318 lplA; putative aldouronate transport system substrate-binding protein
D lin2117 similar to putative transport system integral membrane protein K17319 lplB; putative aldouronate transport system permease protein
D lin2116 similar to putative ABC transporter, permease protein K17320 lplC; putative aldouronate transport system permease protein
D tcsA CD4+ T cell-stimulating antigen, lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D lin1427 similar to ABC transporter (permease proteins) K23535 nupB; general nucleoside transport system permease protein
D lin1428 similar to sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D lin1426 similar to sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D lin0852 similar to putative sugar ABC transporter, periplasmic sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D lin2972 similar to sugar binding protein (ABC transporter) K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D lin0762 similar to sugar ABC transporter, periplasmic sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D lin0220 similar to sugar ABC transporter, sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D lin1841 similar to sugar ABC transporter binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D lin0853 similar to sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D lin2971 similar to sugar ABC transporter permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D lin0760 similar to putative sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D lin0218 similar to sugar ABC transporters, permease proteins K02025 ABC.MS.P; multiple sugar transport system permease protein
D lin1842 similar to sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D lin0854 similar to sugar ABC transporter, permease protein - K02026 ABC.MS.P1; multiple sugar transport system permease protein
D lin2970 similar to sugar ABC transporter permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D lin0761 similar to ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D lin1843 similar to sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D lin0219 similar to sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D lin2642 similar to phosphate ABC transporter (binding protein) K02040 pstS; phosphate transport system substrate-binding protein
D lin2641 similar to phosphate ABC transporter (permease protein) K02037 pstC; phosphate transport system permease protein
D lin2640 similar to phosphate ABC transporter (permease protein) K02038 pstA; phosphate transport system permease protein
D lin2638 similar to phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D lin2639 similar to phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D lin0840 similar to Glutamine ABC transporter (binding and transport protein) K10036 glnH; glutamine transport system substrate-binding protein
D lin0841 similar to amino acid ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D lin2443 similar to amino acid ABC transporter (binding protein) K16957 tcyK; L-cystine transport system substrate-binding protein
D lin2442 similar to amino acid ABC-transporter (permease) K16958 tcyL; L-cystine transport system permease protein
D lin2441 similar to amino acid ABC transporter (permease) K16959 tcyM; L-cystine transport system permease protein
D lin2440 similar to amino acid ABC-transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D lin2352 similar to amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D lin2353 similar to amino acid ABC transporter (ATP-binding protein) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D lin0313 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D lin2512 conserved lipoprotein (putative ABC transporter binding protein) K02073 metQ; D-methionine transport system substrate-binding protein
D lin0311 similar to ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D lin2513 similar to ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D lin0312 similar to ABC transporter (ATP-binding protein) K02071 metN; D-methionine transport system ATP-binding protein
D lin2514 similar to ABC transporter (ATP-binding protein) K02071 metN; D-methionine transport system ATP-binding protein
D lin1849 similar to amino acid ABC transporter (binding protein) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D lin1851 similar to amino acid (glutamine) ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D lin1850 similar to amino acid (glutamine) ABC transporter (ATP-binding protein) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D lin0200 similar to ABC transporter oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D lin2300 similar to pheromone ABC transporter (binding protein) K15580 oppA; oligopeptide transport system substrate-binding protein
D lin2299 similar to oligopeptide ABC transporter (permease) K15581 oppB; oligopeptide transport system permease protein
D lin2298 similar to oligopeptide ABC transporter (permease) K15582 oppC; oligopeptide transport system permease protein
D lin2297 similar to oligopeptide ABC transporter (ATP-binding protein) K15583 oppD; oligopeptide transport system ATP-binding protein
D lin2296 similar to oligopeptide ABC transporter (ATP-binding protein) K10823 oppF; oligopeptide transport system ATP-binding protein
D lin0182 similar to oligopeptide ABC transport system substrate-binding proteins K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D lin0190 similar to oligopeptide ABC transporter-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D lin2714 similar to dipeptide ABC transporter (dipeptide-binding protein) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D lin0183 similar to oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D lin0184 similar to oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D lin0294 similar to transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D lin2073 similar to ferrichrome binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D fhuB similar to ferrichrome ABC transporter (permease) K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D fhuG similar to ferrichrome ABC transporter (permease) K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D fhuC similar to ferrichrome ABC transporter (ATP-binding protein) K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D lin2288 similar to ferrichrome ABC transporter (binding protein) K25113 htsA; heme transport system substrate-binding protein
D lin2287 similar to ferrichrome ABC transporter (permease) K25114 htsB; heme transport system permease protein
D lin2286 similar to ferrichrome ABC transporter (ATP-binding protein) K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D lin2290 lin2290 K25118 isdC; iron-regulated surface determinant protein C
D lin1061 similar to metal binding protein (ABC transporter) K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D lin2525 similar to B. subtilis ferrichrome ABC transporter fhuD precursor (ferrichrome-binding protein) K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D lin0545 similar to ABC transporter (binding protein) K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D lin2524 similar to B. subtilis ferrichrome ABC transporter (permease) FhuG K02015 ABC.FEV.P; iron complex transport system permease protein
D lin2523 similar to B. subtilis ferrichrome ABC transporter (ATP-binding protein) FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D lin1890 similar to ABC transporter (ATP-binding protein) K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D lin1961 similar to adhesion binding proteins and lipoproteins with multiple specificity for metal cations (ABC transporter) K19975 mntC; manganese transport system substrate-binding protein
D lin1962 similar metal cations ABC transporter (permease protein) K19976 mntB; manganese transport system permease protein
D lin1963 similar to metal cations ABC transporter, ATP-binding proteins K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D lin0191 similar to a probable high-affinity zinc ABC transporter (Zn(II)-binding lipoprotein) K09815 znuA; zinc transport system substrate-binding protein
D lin1779 similar to ABC transporter and adhesion proteins K09815 znuA; zinc transport system substrate-binding protein
D lin0193 similar to high-affinity zinc ABC transporter (membrane protein) K09816 znuB; zinc transport system permease protein
D zurM metal (zinc) transport protein (ABC transporter, permease protein) K09816 znuB; zinc transport system permease protein
D lin0192 similar to high-affinity zinc ABC transporter (ATP-binding protein) K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D zurA metal (zinc) transport protein(ABC transporter, ATP-binding protein) K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D lin1168 similar to putative cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D cbiQ similar to cobalt transport protein Q K02008 cbiQ; cobalt/nickel transport system permease protein
D lin1167 similar to cobalamin biosynthesis protein M K02007 cbiM; cobalt/nickel transport system permease protein
D lin1170 similar to cobalt transport ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D lin0607 similar to proteins involved in biotin metabolism (BioY) K03523 bioY; biotin transport system substrate-specific component
D lin2748 highly similar to B. subtilis YbaF protein K16785 ecfT; energy-coupling factor transport system permease protein
D lin2783 similar to B. subtilis YbaF protein K16785 ecfT; energy-coupling factor transport system permease protein
D lin2750 similar to ABC transporter (ATP-binding protein) K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D lin2749 similar to ABC transporter (ATP-binding protein) K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D lin0986 similar to Streptococcus agalactiae CylB protein K11051 cylB; multidrug/hemolysin transport system permease protein
D lin0985 similar to antibiotic ABC transporter, ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D lin1062 highly similar to teichoic acid translocation permease protein TagG K09692 tagG; teichoic acid transport system permease protein
D lin1063 similar to teichoic acid translocation ATP-binding protein TagH (ABC transporter) K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D lin2470 similar to putative ABC-transporter transmembrane subunit K09813 hrtB; hemin transport system permease protein
D lin2726 conserved hypothetical protein K09813 hrtB; hemin transport system permease protein
D lin2471 similar to ABC-transporter ATP binding proteins K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D lin2725 similar to ABC transporter, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D lin2220 similar to ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D lin1857 similar to ABC transporter (permease) K11632 bceB; bacitracin transport system permease protein
D lin1859 similar to ABC transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D lin2219 similar to ABC transporter (ATP-binding protein) K11631 bceA; bacitracin transport system ATP-binding protein
D lin2077 similar to unknown proteins K25147 berB; beta-exotoxin I transport system permease protein
D lin2078 similar to ABC transporter, ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D lin2341 lin2341 K16919 ytrC_D; acetoin utilization transport system permease protein
D lin2911 hypothetical membrane protein K16919 ytrC_D; acetoin utilization transport system permease protein
D lin2342 similar to ABC transporter (ATP-binding protein) K16921 ytrB; acetoin utilization transport system ATP-binding protein
D lin2912 similar to ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D ftsX highly similar to cell-division protein FtsX K09811 ftsX; cell division transport system permease protein
D ftsE highly similar to the cell-division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D lin2317 similar to ABC transporter (membrane protein) K25157 ecsB; ABC-2 type transport system permease protein
D lin2318 similar to ABC transporter (ATP-binding protein) K25158 ecsA; ABC-2 type transport system ATP-binding protein
D lin2245 similar to ABC transporter (membrane protein) K01992 ABC-2.P; ABC-2 type transport system permease protein
D lin0308 similar to hypothetical proteins K01992 ABC-2.P; ABC-2 type transport system permease protein
D lin0751 similar to hypothetical proteins K01992 ABC-2.P; ABC-2 type transport system permease protein
D lin0673 similar to putative ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D lin0979 similar to ABC transporter transmembrane component K01992 ABC-2.P; ABC-2 type transport system permease protein
D lin0925 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D lin1678 similar to membrane proteins K01992 ABC-2.P; ABC-2 type transport system permease protein
D lin1835 similar to ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin2330 similar to ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D pli0041 similar to ABC transporter ATP-binding protein; hypothetical start K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin0744 similar to ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin2244 similar to ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin0307 similar to ABC transporters (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin0672 similar to ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin0978 similar to daunorubicin resistance ATP-binding proteins K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin0750 Similar to ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin0924 similar to ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin1677 similar to similar to ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D lin0234 similar to membrane protein (putative ABC transporter component) K02004 ABC.CD.P; putative ABC transport system permease protein
D lin1187 similar to different proteins K02004 ABC.CD.P; putative ABC transport system permease protein
D lin1541 similar to transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D lin0419 similar to ABC transporter, ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D lin2915 hypothetical membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D lin0418 similar to ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D lin1186 similar to ABC transporter, ATP-binding proteins K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D lin1540 similar to ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D lin2914 similar to ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D lin0746 similar to ABC transporter, ATP-binding protein (truncated, N-terminal part) K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D lin0233 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D lin2510 similar to ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D lin0989 conserved hypothetical protein K18908 mepA; MATE family, multidrug efflux pump
D lin1960 similar to conserved hypothetical proteins K26939 norM; MATE family, multidrug efflux pump
D lin0003 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D lin0614 conserved hypothetical membrane protein K26937 dinF; MATE family, multidrug efflux pump
D lin2192 similar to unknown proteins K26937 dinF; MATE family, multidrug efflux pump
D lin2873 conserved hypothetical proteins K26937 dinF; MATE family, multidrug efflux pump
D lin2982 similar to sugar transport proteins K06610 iolF; MFS transporter, SP family, inositol transporter
D lin2274 similar to antiporter proteins K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D lin2340 similar to transport system permease protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D lin2339 similar to transport system permease protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D lin0946 hypothetical transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D lin0830 similar to Tetracycline resistance protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D lin2884 similar to drug-efflux transporters K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D lin2476 similar to multi-drug resistance efflux pump K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D lin0870 similar to antibiotic resistance protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D lin2149 similar to integral membrane proteins K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D lin1824 similar to multidrug resistance protein, integral membrane protein K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D lin2951 similar to transmembrane efflux protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D lin0519 similar to multidrug resistance protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D lin1446 similar to multidrug-efflux transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D lin1456 highly similar to B. subtilis YxiO protein K06902 UMF1; MFS transporter, UMF1 family
D lin1002 phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D ptsH PTS phosphocarrier protein Hpr (histidine containing protein) K02784 ptsH; phosphocarrier protein HPr
D lin1016 similar to phosphotransferase system glucose-specific enzyme IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D lin0026 similar to PTS system, beta-glucosides specific enzyme IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D lin1223 similar to PTS system trehalose specific enzyme IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D lin0446 similar to PTS fructose-specific enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin2242 similar to PTS system, fructose-specific enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin0376 similar to PTS system, enzyme IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin0421 similar to phosphotransferase system enzyme IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D lin0423 similar to fructose-specific phosphotransferase enzyme IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin0448 similar to PTS fructose-specific enzyme IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D fruA highly similar to phosphotransferase system (PTS) fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin2240 similar to PTS system, fructose-specific enzyme IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin0377 similar to PTS system, fructose-specific enzyme IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D lin0422 similar to fructose-specific phosphotransferase enzyme IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D lin2241 similar to PTS system, fructose-specific enzyme IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D lin2929 similar to phosphotransferase system mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D lin2931 similar to phosphotransferase system mannitol-specific enzyme IIBC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D lin2457 similar to PTS system, cellobiose-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2360 similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0329 similar to PTS beta-glucoside-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0872 similar to PTS system enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin0917 similar to phosphotransferase system enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin1830 similar to phosphotransferase system (PTS) lichenan-specific enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2908 similar to PTS cellobiose-specific enzyme IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2833 similar to cellobiose phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D lin2472 similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2458 similar to PTS system, cellobiose-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0327 similar to PTS beta-glucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0393 similar to PTS betaglucoside-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0873 similar to PTS system, beta-glucoside enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0914 similar to PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin1080 similar to PTS system, cellobiose-specific IIB component (cel A) K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin1831 similar to phosphotransferase system (PTS) lichenan-specific enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2905 similar to PTS cellobiose-specific enzyme IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin2831 similar to cellobiose phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D lin0326 similar to PTS beta-glucoside-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0392 similar to PTS betaglucoside-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0874 similar to PTS system, Lichenan-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0900 similar to PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0915 similar to phosphotransferase system enzyme IIC (truncated, N-terminal end) K02761 celB; cellobiose PTS system EIIC component
D lin2459 similar to PTS system, cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin2832 similar to cellobiose phosphotransferase enzyme IIC component K02761 celB; cellobiose PTS system EIIC component
D lin2856 similar to PTS system, cellobiose-specific enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D lin2906 similar to PTS cellobiose-specific enzyme IIC K02761 celB; cellobiose PTS system EIIC component
D lin0033 similar to PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D lin0546 similar to PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D lin0547 similar to PTS system, glucitol/sorbitol-specific enzyme IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D lin0548 similar to PTS system, glucitol/sorbitol-specific enzyme II CII component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D lin2202 similar to PTS system galactitol-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin2816 similar to PTS system galactitol-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin0503 similar to PTS fructose-specific enzyme IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D lin2815 similar to PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin0507 similar to PTS system, Galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin2201 similar to PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D lin2814 similar to PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D lin0508 similar to PTS system, Galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D lin2200 similar to PTS system galactitol-specific enzyme IIC component K02775 gatC; galactitol PTS system EIIC component
D lin0143 similar to PTS system mannose-specific, factor IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D lin2105 similar to PTS mannose-specific enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0777 similar to mannose-specific phosphotransferase system (PTS) component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0020 similar to PTS system, fructose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D lin0775 similar to mannose-specific phosphotransferase system (PTS) component IIC K02795 manY; mannose PTS system EIIC component
D lin0144 similar to PTS system mannose-specific, factor IIC K02795 manY; mannose PTS system EIIC component
D lin0022 similar to PTS system, fructose-specific IIC component K02795 manY; mannose PTS system EIIC component
D lin0774 similar to mannose-specific phosphotransferase system (PTS) component IID K02796 manZ; mannose PTS system EIID component
D lin0145 similar to PTS system mannose-specific, factor IID K02796 manZ; mannose PTS system EIID component
D lin0023 similar to PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D lin2110 similar to PTS mannose-specific enzyme IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D lin2109 similar to PTS mannose-specific enzyme IIC component K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D lin2108 similar to PTS mannose-specific enzyme IID component K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D lin2800 similar to mannitol-specific PTS enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D lin2799 similar to hypothetical PTS enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D lin2798 similar to hypothetical PTS enzyme IIC component K03475 ulaA; ascorbate PTS system EIIC component
D lin0369 similar to unknown proteins K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D lin2845 lin2845 K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D glpF similar to glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D lin1574 similar to glycerol uptake facilitator K02440 glpF; glycerol uptake facilitator
D lin2165 similar to potassium channel subunit K10716 kch; voltage-gated potassium channel
D lin1551 similar to ammonium transporter NrgA K03320 amt; ammonium transporter, Amt family
D lin0912 similar to transporters (formate) K21993 fdhC; formate transporter
D lin2170 similar to large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D lin1012 similar to conserved hypothetical proteins like to B. subtilis YkuT protein K22044 ybiO; moderate conductance mechanosensitive channel
D lin0693 similar to motility protein (flagellar motor rotation) MotA K02556 motA; chemotaxis protein MotA
D motB similar to motility protein (flagellar motor rotation) MotB K02557 motB; chemotaxis protein MotB
D lin1052 similar to membrane and transport proteins K03284 corA; magnesium transporter
D lin0651 similar to membrane proteins K03284 corA; magnesium transporter
D lin2187 similar to unknown protein K06199 crcB; fluoride exporter
D lin2188 similar to unknown proetin K06199 crcB; fluoride exporter
D lin2881 conserved hypothetical protein similar to hypothetical hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D lin2498 similar to conserved hypothetical proteins K03699 tlyC; magnesium and cobalt exporter, CNNM family
D lin2334 similar to unknown proteins K03699 tlyC; magnesium and cobalt exporter, CNNM family
D lin1115 similar to Salmonella typhimurium PduA protein K27260 pduA; bacterial microcompartment shell protein
D lin1144 similar to putative carboxysome structural protein K04027 eutM; ethanolamine utilization protein EutM
D lin0791 similar to lysine-specific permease K11733 lysP; lysine-specific permease
D lin0780 similar to amino acid transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D lin2462 similar to amino acid antiporter (acid resistance) K20265 gadC; glutamate:GABA antiporter
D lin2720 similar to cation transport protein (efflux) K16264 czcD; cobalt-zinc-cadmium efflux system protein
D lin0435 conserved membrane protein K07238 TC.ZIP; zinc transporter, ZIP family
D lin0846 similar to E. coli SugE protein (transmembrane chaperone) K11741 sugE; quaternary ammonium compound-resistance protein SugE
D lin0847 similar to E. coli SugE protein (transmembrane chaperone) K11741 sugE; quaternary ammonium compound-resistance protein SugE
D lin0212 similar to a glucose uptake protein K05340 glcU; glucose uptake protein
D lin0444 similar to Staphylococcus xylosus glucose uptake protein K05340 glcU; glucose uptake protein
D lin0788 conserved hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D lin1174 similar to unknown proteins K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D lin1173 similar to unknown proteins K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D betL glycine betaine transporter BetL K05020 opuD; glycine betaine transporter
D lin2447 similar to putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D lin0795 similar to putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D pli0079 similar to Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D lin0992 similar to Na+-transporting ATP synthase subunit J K03498 trkH; trk/ktr system potassium uptake protein
D lin1022 similar to a bacterial K(+)-uptake system K03499 trkA; trk/ktr system potassium uptake protein
D lin0473 similar to permeases K10974 codB; cytosine permease
D pyrP highly similar to uracil permease K02824 uraA; uracil permease
D lin1997 similar to xanthine permeases K16169 pbuX; xanthine permease
D lin0582 conserved hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D lin1959 similar to conserved hypothetical proteins K06901 pbuG; adenine/guanine/hypoxanthine permease
D lin2356 similar to unknown proteins K06901 pbuG; adenine/guanine/hypoxanthine permease
D lin0896 similar to transport proteins K03321 TC.SULP; sulfate permease, SulP family
D lin1463 similar to manganese transport proteins NRAMP K03322 mntH; manganese transport protein
D lin0823 similar to transport protein (truncated, C-terminal part) K03324 yjbB; phosphate:Na+ symporter
D lin0822 similar to transport protein (Truncated, N-terminal part) K03324 yjbB; phosphate:Na+ symporter
D pli0037 similar to arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D lin1338 similar to arsenic efflux pump protein K03893 arsB; arsenical pump membrane protein
D pli0039 similar to heavy metal membrane efflux protein K03325 ACR3; arsenite transporter
D pli0038 similar to possible arsenic resistance membrane protein ArsB K03325 ACR3; arsenite transporter
D lin2477 similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D lin2478 similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D lin2479 similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D lin2480 similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D lin2481 similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D lin2482 similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D lin2483 similar to proteins involved in resistance to cholate and to NA(+) and in pH homeostasis K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D lin0826 lin0826 K24180 mleP; malate permease and related proteins
D lin1480 similar to transport proteins K26605 azlC; branched chain amino acid efflux pump
D lin1481 lin1481 K26606 azlD; branched chain amino acid efflux pump
D lin2059 similar to unknown protein K23675 fmnP; riboflavin transporter
D lin1468 similar to unknown proteins K16789 thiT; thiamine transporter
D lin1059 similar to cell-division protein RodA and FtsW K03588 ftsW; cell division protein FtsW
D lin0384 similar to conserved hypothetical protein K07243 FTR; high-affinity iron transporter
D lin0385 conserved hypothetical protein, putative lipoprotein K07224 efeO; iron uptake system component EfeO
D lin0386 conserved hypothetical protein similar to B. subtilis YwbN protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D lin2208 lin2208 K04758 feoA; ferrous iron transport protein A
D lin2209 similar to ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D lin2751 conserved hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D lin2168 similar to copper export proteins K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:lin02044]
D lin2135 similar to unknown proteins K02221 yggT; YggT family protein
D comEA similar to integral membrane protein ComEA K02237 comEA; competence protein ComEA
D comEB similar to B. subtilis ComEB protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D comEC similar to putative integral membrane protein ComEC specifically required for DNA uptake but not for binding K02238 comEC; competence protein ComEC
D comFA similar to late competence protein comFA K02240 comFA; competence protein ComFA
D comFC similar to late competence protein comFC K02242 comFC; competence protein ComFC
D comGA similar to B. subtilis comG operon protein 1 K02243 comGA; competence protein ComGA
D comGB similar to B. subtilis comG operon protein 2 K02244 comGB; competence protein ComGB
D lin1382 similar to B. subtilis comG operon protein 3 K02245 comGC; competence protein ComGC
D lin1381 similar to comG operon protein 4 (comGD) K02246 comGD; competence protein ComGD
D lin1380 similar to comG operon protein 5 (comGE) K02247 comGE; competence protein ComGE
D lin1379 similar to B. subtilis comG operon protein 6 K02248 comGF; competence protein ComGF
D lin1378 weakly similar to B. subtilis comG operon protein 7 (comGG) K02249 comGG; competence protein ComGG
D comC similar to B. subtilis late competence protein ComC (type IV prepilin peptidase) K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D comK.1 competence transcription factor (C-terminal part) K02250 comK; competence protein ComK
D comK similar to competence transcription factor ComK, N terminal part K02250 comK; competence protein ComK
D lin0688 similar to flagella-associated protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D lin0687 similar to flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D lin0721 similar to flagellar basal-body M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D lin0723 lin0723 K02411 fliH; flagellar assembly protein FliH
D lin0724 similar to H+-transporting ATP synthase alpha chain FliI, flagellar-specific, - K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D lin0701 similar to flagellar motor switch protein fliY C-terminal part K02417 fliN; flagellar motor switch protein FliN
D lin0708 similar to flagellar motor switch protein fliY K02417 fliN; flagellar motor switch protein FliN
D lin0706 weakly similar to flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D lin0684 similar to flagellar biosynthesic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D lin0685 similar to flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D lin0686 similar to flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D lin0592 similar to preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D secA translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D lin1562 similar to protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D secE highly similar to preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE
D lin2545 similar to preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D secY highly similar to preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D ffh similar to signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D lin1917 similar to FtsY of E. coli and SRP receptor alpha-subunit K03110 ftsY; fused signal recognition particle receptor
D lin1564 similar to unknown proteins K03210 yajC; preprotein translocase subunit YajC
D lin2986 highly similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin1416 similar to B. subtilis SpoIIIJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D lin0381 similar to conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D lin0380 similar to conserved hypothetical integral membrane protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:lin02042]
D lin2881 conserved hypothetical protein similar to hypothetical hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D lin2498 similar to conserved hypothetical proteins K03699 tlyC; magnesium and cobalt exporter, CNNM family
D lin2334 similar to unknown proteins K03699 tlyC; magnesium and cobalt exporter, CNNM family
D lin1978 similar to hemolysinIII proteins, putative integral membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lin02022]
D phoR two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D phoP two-component response phosphate regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D lin2827 similar to the two components sensor protein kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D pli0050 similar to the two components sensor protein kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D lin2826 similar to two components response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D pli0051 similar to the two components response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D resE similar to two-component sensor histidine kinase (ResE) K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D resD similar to two-component response regulator (ResD) K07775 resD; two-component system, OmpR family, response regulator ResD
D lin0316 similar to two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D lin0315 similar to two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D lin1852 similar to two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D lin1856 similar to two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D lisK two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D lisR two-component response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D lin1542 similar to two-component response regulators K02483 K02483; two-component system, OmpR family, response regulator
D lin2728 similar to two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D lin2659 similar to B. subtilis two-component response regulator DegU K07692 degU; two-component system, NarL family, response regulator DegU
D lin1020 similar to two-component sensor histidine kinase in particular B. subtilis YvqE protein K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D lin1021 similar to two-component response regulator, in particular B. subtilis YvqC protein K11618 liaR; two-component system, NarL family, response regulator LiaR
D lin0043 similar to sensor histidine kinase (AgrC from Staphylococcus) K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D lin0044 similar to 2-components response regulator protein (AgrA from Staphylococcus) K07707 agrA; two-component system, LytTR family, response regulator AgrA
D cheA two-component sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D cheY Chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D lin0697 similar to CheA activity-modulating chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D lin2119 similar to two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D lin2118 similar to two-component response regulator K07720 yesN; two-component system, response regulator YesN
D lin1137 similar to two-component sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D lin1136 similar to similar to two-component response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:lin02035]
D cheA two-component sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D lin0691 similar to chemotactic methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D cheY Chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D lin0697 similar to CheA activity-modulating chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D lin0731 similar to metyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D lin0723 lin0723 K02411 fliH; flagellar assembly protein FliH
D lin0724 similar to H+-transporting ATP synthase alpha chain FliI, flagellar-specific, - K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D lin0684 similar to flagellar biosynthesic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D lin0685 similar to flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D lin0686 similar to flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D lin0688 similar to flagella-associated protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D lin0687 similar to flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D lin0722 similar to flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D lin0707 similar to flagellar switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D lin0701 similar to flagellar motor switch protein fliY C-terminal part K02417 fliN; flagellar motor switch protein FliN
D lin0708 similar to flagellar motor switch protein fliY K02417 fliN; flagellar motor switch protein FliN
D lin0706 weakly similar to flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D lin0721 similar to flagellar basal-body M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D lin0720 similar to flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D lin0718 similar to flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB
D lin0719 similar to flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D lin0704 similar to flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D lin0690 similar to flagellar hook-basal body protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D lin0705 similar to flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D lin0713 similar to flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D lin0714 similar to flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D flaA flagellin protein K02406 fliC; flagellin
D lin0715 similar to flagellar hook-associated protein 2 FliD K02407 fliD; flagellar hook-associated protein 2
D lin0716 similar to hypothetical flagellar protein K02422 fliS; flagellar secretion chaperone FliS
D lin0693 similar to motility protein (flagellar motor rotation) MotA K02556 motA; chemotaxis protein MotA
D motB similar to motility protein (flagellar motor rotation) MotB K02557 motB; chemotaxis protein MotB
D lin0689 similar to flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lin04812]
D mreB similar to cell-shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D lin1825 similar to cell-shape determining proteins K03569 mreB; rod shape-determining protein MreB and related proteins
D mbl similar to MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D ftsZ highly similar to cell-division initiation protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ftsA highly similar to cell-division protein FtsA K03590 ftsA; cell division protein FtsA
D minC similar to cell-division inhibition (septum placement) protein MinC K03610 minC; septum site-determining protein MinC
D minD highly similar to cell division inhibitor (septum placement) protein MinD K03609 minD; septum site-determining protein MinD
D parA Partition protein, ParA homolog K03496 parA; chromosome partitioning protein
D parB Partition protein ParB homolg K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D lin2926 highly similar to B. subtilis DNA-binding protein Spo0J-like homolog YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lin04147]
D lin0941 similar to heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D eno highly similar to enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D gap highly similar to glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D pgk highly similar to phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D pykA highly similar to pyruvate kinases K00873 PK; pyruvate kinase [EC:2.7.1.40]
D lin2556 similar to dipeptidases K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D groEL class I heat-shock protein (chaperonin) GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D dnaK class I heat-shock protein (molecular chaperone) DnaK K04043 dnaK; molecular chaperone DnaK
D pgi glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D lin0179 similar to inosine monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D guaB similar to inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D tufA highly similar to translation elongation factor EF-Tu K02358 tuf; elongation factor Tu
D lin2319 similar to histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D ldh similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1775 similar to L-lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1569 similar to L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D lin1453 similar to Acetyl-CoA:acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D adk highly similar to adenylate kinases K00939 adk; adenylate kinase [EC:2.7.4.3]
D apt similar to adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D argH similar to argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D argG similar to argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D lin1573 similar to glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D glnA highly similar to glutamine synthetases K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D hemB highly similar to delta-aminolevulinic acid dehydratases (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D lin2956 similar to D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D purH Bifunctional phosphoribosylaminoimidazole carboxy formyl formyltransferase and inosine-monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PdhD highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin1408 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D lin2085 similar to glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D lin0364 similar to triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D tpi highly similar to triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D lin2308 similar to phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lin02048]
D lin2744 similar to hypothetical proteins K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D lin2742 lin2742 K19137 csn2; CRISPR-associated protein Csn2
D lin0521 similar to HsdR type IC restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D lin0525 similar to specificity determinant HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D lin0523 similar to specificity determinant HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D lin0522 similar to HsdM type IC modification subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D lin0088 similar to site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D lin1617 weakly similar to site specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D lin0887 similar to B. subtilis YdcE protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D lin0886 similar to B. subtilis YdcD protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D lin2628 similar to B. subtilis yvlC protein K03973 pspC; phage shock protein C
D ftsZ highly similar to cell-division initiation protein FtsZ K03531 ftsZ; cell division protein FtsZ
D mreB similar to cell-shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D lin1825 similar to cell-shape determining proteins K03569 mreB; rod shape-determining protein MreB and related proteins
D mbl similar to MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D parC highly similar to DNA gyrase-like protein (subunit A) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D parE highly similar to DNA gyrase-like protein (subunit B) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D lin2130 similar to a NifS-like protein required for NAD biosynthesis K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1635 similar to iron-sulfur cofactor synthesis protein nifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lin1548 similar to iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:lin04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:lin04090]
C 01504 Antimicrobial resistance genes [BR:lin01504]
D lin1820 similar to aminoglycoside N3'-acetyltransferases K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D lin0830 similar to Tetracycline resistance protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D lin0920 similar to ABC transporter ATP-binding protein (antibiotic resistance) K18231 msr; macrolide transport system ATP-binding/permease protein
D lin1810 similar to glutathione transferase - fosfomycin resistance protein K21252 fosX; fosfomycin resistance protein FosX
D lin0199 some similarities to probable beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D lin1969 similar to similar to D-alanyl-D-alanine carboxypeptidases K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D dltA D-alanine-activating enzyme (dae), D-alanine-D-alanyl carrier protein ligase (dcl) K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D dltB DltB protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid K03739 dltB; membrane protein involved in D-alanine export
D dltC D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D dltD DltD protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid K03740 dltD; D-alanine transfer protein
D lin1803 similar to putative membrane proteins K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D lin2888 similar to ABC transporter (ATP-binding protein) K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D lin2951 similar to transmembrane efflux protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D lin0988 similar to regulatory proteins (MarR family) K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D lin0989 conserved hypothetical protein K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lin00537]
D lin2556 similar to dipeptidases K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:lin03200]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lin03100]
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-4 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His-2 tRNA-His K14226 tRNA-His; tRNA His
D tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D rRNA-16s-2 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-1 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-3 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-4 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-5 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-16s-6 rRNA-16s K01977 16SrRNA; 16S ribosomal RNA
D rRNA-23s-1 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-2 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-3 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-4 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-5 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-23s-6 rRNA-23s K01980 23SrRNA; 23S ribosomal RNA
D rRNA-5s-1 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-2 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-3 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-4 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-5 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
D rRNA-5s-6 rRNA-5s K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D lin1848 similar to glycerol dehydrogenase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D lin2113 similar to oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D lin2614 similar to NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D lin0779 similar to acyl-carrier protein phosphodiesterase and to NAD(P)H dehydrogenase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D lin0620 similar to acyl-carrier protein phosphodiesterase and NAD(P)H dehydrogenase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D lin1974 similar to peptidyl methionine sulfoxide reductases K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D lin1973 similar to transcriptional regulator (PilB family) K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D lin1625 similar to thiol peroxidases K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D lin2302 similar to unknown protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D lin2489 similar to hypothetical thioredoxine reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D lin2075 similar to oxidoreductases K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D lin0306 highly similar to anaerobic ribonucleotide reductase activator protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D pflC pyruvate-formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D lin2000 similar to conserved hypothetical proteins K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D lin0812 similar to B. subtilis regulatory protein PaiA K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D lin0669 similar to acetyl transferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D lin2444 similar to B. subtilis YtmI protein K00680 ytmI; uncharacterized N-acetyltransferase [EC:2.3.1.-]
D lin1847 similar to unknown proteins K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D lin1092 similar to E. coli YjaB protein K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D lin2966 similar to a maltose phosphorylase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D lin1839 some similarities to cellobiose-phosphorylase K21298 E2.4.1.333; 1,2-beta-oligoglucan phosphorylase [EC:2.4.1.333]
D lin0857 lin0857 K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D lin2973 similar to Sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D lgt highly similar to prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D lin1128 hyghly similar to Salmonella enterica PduO protein K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D lin2907 similar to xylose operon regulatory protein and to glucose kinase K18673 bglK; beta-glucoside kinase [EC:2.7.1.85]
D lin2785 conserved hypothetical lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D lin1928 similar to unknown proteins K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D lin0599 similar to a fusion of two types of conserved hypothetical proteinconserved hypothetical K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D lin1980 similar to conserved hypothetical proteins K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D lin1494 similar to unknown protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D lin2277 similar to unknown proteins K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D lin2225 similar to unknown proteins K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D lin0432 similar to phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D lin2626 HPr-P(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D lin0263 similar to arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D lin2544 similar to carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D lin0544 similar to penicillin-binding protein K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D lin2797 similar to Phosphotriesterase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D lin2902 similar to unknown protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D lin2527 similar to acetylesterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D lin1320 similar to B. subtilis YneP protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D lin1914 similar to protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D lin2049 similar to protein-tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D lin1527 similar to unknown proteins K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D lin0045 highly similar to B. subtilis YybT protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D lin1503 similar to unknown proteins K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D lin0224 similar to conserved hypothetical proteins K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D lin0226 similar to B. subtilis YabF protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D lin0424 highly similar to E. col YbgG protein, a putative sugar hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D lin0449 similar to sugar hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D lin1700 similar to N-acetylmuramoyl-L-alanine amidase (N-terminal part) and to L-alanoyl-D-glutamate peptidase (C-terminal part) K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D lin2374 similar to N-acetylmuramoyl-L-alanine amidase (N-terminal part) and to L-alanoyl-D-glutamate peptidase (C-terminal part) K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D lin2563 similar to N-acetylmuramoyl-L-alanine amidase (N-terminal part) and to L-alanoyl-D-glutamate peptidase (C-terminal part) K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D lin1043 similar to formylmethionine deformylase and to B. subtilis YkrB protein K01462 PDF; peptide deformylase [EC:3.5.1.88]
D lin0436 similar to endo-1,4-beta-xylanase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D lin0837 conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D lin0471 conserved hypothetical protein similar to B. subtilis YeaC K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D lin2684 similar to phosphatases K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D lin0483 similar to unknown proteins K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D lin1663 similar to unknown proteins K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D lin2978 highly similar to B. subtilis YulD protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D lin0832 similar to cation (calcium) transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D lin0814 similar to cation transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D pli0061 similar to cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D lin0644 similar to heavy metal-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D pli0048 similar to heavy metal-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D lin2836 highly similar to Mg2+ transport ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D lin2107 weakly similar to glucosamine-fructose-6-phosphate aminotransferase K19504 gfrE; glucoselysine-6-phosphate deglycase
D lin0034 similar to Glucosamine--fructose-6-phosphate aminotransferase (C-terminal domain) K19504 gfrE; glucoselysine-6-phosphate deglycase
D lin2106 similar to opine catabolism protein K19510 gfrF; fructoselysine-6-phosphate deglycase
D lin1120 similar to diol dehydratase-reactivating factor large subunit K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D lin1121 similar to diol dehydratase-reactivating factor small chain K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D lin2729 similar to formate dehydrogenase associated protein K02379 fdhD; FdhD protein
D lin2058 similar to ferredoxin K05337 fer; ferredoxin
D lin2507 similar to conserved hypothetical proteins K04488 iscU; nitrogen fixation protein NifU and related proteins
D lin1822 similar to putative flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
D lin1977 similar to hypothetical proteins K25232 fakB; fatty acid kinase fatty acid binding subunit
D lin2658 similar to B. subtilis YviA (DegV) protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D lin1150 similar to ethanolamine utilization protein EutH - Escherichia coli K04023 eutH; ethanolamine transporter
D lin1125 similar to ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D lin1141 similar to putative carboxysome structural protein (eutL) K04026 eutL; ethanolamine utilization protein EutL
D lin1109 similar to Salmonella enterica PduV protein K04029 eutP; ethanolamine utilization protein EutP
D lin1151 similar to ethanolamine utilization protein EutQ K04030 eutQ; ethanolamine utilization protein EutQ
D lin1108 similar to Salmonelle enterica PduU protein K04031 eutS; ethanolamine utilization protein EutS
D lin2137 similar to unknown proteins K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D lin2698 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D lin1035 similar to molybdopterin-guanine dinucleotide biosynthesis MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D lin1106 similar to Salmonella enterica PduS protein K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
D lin0753 lin0753 K15975 K15975; glyoxalase family protein
D lin0292 similar to other proteins K15975 K15975; glyoxalase family protein
D lin0589 weakly similar to carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D lin0754 lin0754 K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D cspL similar to cold shock protein K03704 cspA; cold shock protein
D cspD similar to cold shock protein K03704 cspA; cold shock protein
D cspB similar to major cold-shock protein K03704 cspA; cold shock protein
D lin2418 similar to anti-repressor K07741 antB; anti-repressor protein
D lin0080 similar to similar to anti-repressor [Bacteriophage A118] K07741 antB; anti-repressor protein
D lin2295 similar to unknown proteins K16509 spxA; regulatory protein spx
D lin0897 conserved hypothetical protein K06959 tex; protein Tex
C 99974 Translation
D lin2468 similar to B. subtilis general stress protein 13 containing a ribosomal S1 protein domain K07570 GSP13; general stress protein 13
D lin0250 polyribonucleotide nucleotidyltransferase domain present K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D lin0262 similar to B. subtilis YacH protein K19411 mcsA; protein arginine kinase activator
D tig trigger factor (prolyl isomerase) K03545 tig; trigger factor
D lin2542 conserved hypothetical protein K03664 smpB; SsrA-binding protein
D lin1816 similar to conserved hypothetical proteins K07397 yhfA; putative redox protein
D mecA competence negative regulator mecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D lin0580 similar to methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D lin1584 similar to DNA repair protein RadC K03630 radC; DNA repair protein RadC
D lin0662 conserved hypothetical protein K07457 K07457; endonuclease III related protein
D lin0209 similar to B. subtilis YazA protein K07461 K07461; putative endonuclease
D lin1313 similar to polypeptide deformylase, similar to B. subtilis Smf protein K04096 smf; DNA processing protein
D dnaD similar to chromosome replication initiation protein K02086 dnaD; DNA replication protein
D lin0104 highly similar to putative terminase small subunit [Bacteriophage A118] K07474 xtmA; phage terminase small subunit
D lin0105 putative terminase large subunit from Bacteriophage A118 K06909 xtmB; phage terminase large subunit
D lin1267 similar to a B. subtilis PBSX phage protein K06909 xtmB; phage terminase large subunit
D lin1549 similar to unknown protein K07478 ycaJ; putative ATPase
D lin2587 similar to bacteriophage protein K06919 K06919; putative DNA primase/helicase
D lin0664 similar to transposases K07483 K07483; transposase
D lin0827 similar to transposase K07483 K07483; transposase
D pli0025 similar to transposase K07483 K07483; transposase
D pli0077 similar to transposase N-terminal part K07483 K07483; transposase
D pli0058 similar to transposase K07497 K07497; putative transposase
D pli0072 similar to transposase K07497 K07497; putative transposase
D pli0076 Transposase K07497 K07497; putative transposase
D pli0012 Transposase K07498 K07498; putative transposase
D pli0020 similar to transposase K07498 K07498; putative transposase
D pli0024 similar to transposase K07498 K07498; putative transposase
D pli0028 Transposase K07498 K07498; putative transposase
D pli0032 Transposase K07498 K07498; putative transposase
D pli0042 Similar to transposase, N-terminal part K07498 K07498; putative transposase
D pli0043 Transposase K07498 K07498; putative transposase
D pli0049 Transposase K07498 K07498; putative transposase
D pli0063 similar to transposase K07498 K07498; putative transposase
D pli0071 similar to transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D lin1828 similar to hypothetical proteins K07504 K07504; predicted type IV restriction endonuclease
D lin2851 highly similar to B. subtilis YaaK protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D lin0648 similar to amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D lin2613 similar to amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D lin0564 similar to di-tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D lin2351 similar to low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D lin0428 similar to phosphate transport protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D lin1873 similar to putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D lin0247 conserved membrane-spanning protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D lin2985 highly similar to B. subtilis Jag protein K06346 jag; spoIIIJ-associated protein
D int putative integrase [Bacteriophage A118] K06400 spoIVCA; site-specific DNA recombinase
D lin0236 similar to B. subtilis SpoVG protein K06412 spoVG; stage V sporulation protein G
D lin0235 similar to B. subtilis SpoVG protein K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
D lin2889 lin2889 K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D lin1055 similar to GTP-binding elongation factor K06207 typA; GTP-binding protein
D lin0537 similar to unknown proteins K07166 K07166; ACT domain-containing protein
D lin1504 similar to phosphate starvation induced protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D lin0232 lin0232 K02005 ABC.CD.TX; HlyD family secretion protein
D lin2451 similar to unknown protein K21908 hdeD; membrane protein HdeD
D lin1116 similar to Salmonella typhimurium PduB protein K27263 pduB; bacterial microcompartment shell protein
D lin1123 similar to carboxysome structural protein K27266 pduJ; bacterial microcompartment shell protein
D lin1122 similar to Salmonella enterica PduK protein K27267 pduK; bacterial microcompartment shell protein
D lin1126 lin1126 K27268 pduM; bacterial microcompartment assembly protein
D lin1127 similar to carbon dioxide concentrating mechanism protein K27269 pduN; bacterial microcompartment shell vertex protein
D lin1107 similar to Salmonella enterica PduT protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D lin2637 similar to negative regulator of phosphate regulon K02039 phoU; phosphate transport system protein
D lin1017 similar to E. coli copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D lin0025 similar to E. coli copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D lin2529 similar to B. subtilis YfhL protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D lin1972 similar to dehydogenases and hypothetical proteins K03810 mviM; virulence factor
D lin2293 similar to a putative competence protein from streptococcus pneumoniae K06198 coiA; competence protein CoiA
D pheT.2 similar phenylalanyl-tRNA synthetase (beta subunit) K06878 K06878; tRNA-binding protein
D lin1189 similar to transporter, (to B. subtilis YdgH protein) K06994 K06994; putative drug exporter of the RND superfamily
D lin2557 similar to transport protein K06994 K06994; putative drug exporter of the RND superfamily
D lin0287 similar to unknown proteins K07025 K07025; putative hydrolase of the HAD superfamily
D lin0639 lin0639 K07025 K07025; putative hydrolase of the HAD superfamily
D lin2506 similar to conserved hypothetical proteins K09014 sufB; Fe-S cluster assembly protein SufB
D lin2509 similar to aminotransferase K09015 sufD; Fe-S cluster assembly protein SufD
D lin1798 similar to hypothetical proteins K07038 K07038; inner membrane protein
D lin1818 similar to transport proteins K07058 K07058; membrane protein
D lin1604 similar to unknown proteins K07113 fxsA; UPF0716 protein FxsA
D lin1421 similar to unknown protein K07146 K07146; UPF0176 protein
D lin2872 similar to unknown proteins K04750 phnB; PhnB protein
D lin1207 lin1207 K04750 phnB; PhnB protein
D lemA Listeria epitope LemA K03744 lemA; LemA protein
D lin0898 similar to B. subtilis YdcK protein K03095 sprL; SprT-like protein
D lin0035 similar to E. coli DedA protein K03975 dedA; membrane-associated protein
D lin2460 transmembrane protein K01421 yhgE; putative membrane protein
D lin0653 conserved membrane protein K01421 yhgE; putative membrane protein
D lin2627 similar to B. subtilis YvlD protein K08972 K08972; putative membrane protein
D lin0659 conserved hypothetical protein K08976 K08976; putative membrane protein
D lin0882 similar to B. subtilis YbtB protein K08981 K08981; putative membrane protein
D lin0922 similar to B. subtilis YcgQ protein K08986 ycgQ; putative membrane protein
D lin0518 similar to unknown protein K08987 K08987; putative membrane protein
D lin0828 similar to B. subtilis YrkR protein K13256 psiE; protein PsiE
D lin0389 conserved hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D lin2710 conserved hypothetical protein K06885 K06885; uncharacterized protein
D lin1094 lin1094 K06889 K06889; uncharacterized protein
D lin2180 similar to unknown proteins K06889 K06889; uncharacterized protein
D lin2363 similar to unknown proteins K06889 K06889; uncharacterized protein
D lin2310 similar to unknown protein K06890 K06890; uncharacterized protein
D lin1324 conserved hypothetical protein, similar to B. subtilis YneT protein K06929 K06929; uncharacterized protein
D lin1889 similar to unknown protein K06950 K06950; uncharacterized protein
D lin1910 similar to unknown protein K06960 K06960; uncharacterized protein
D lin0274 similar to B. subtilis Yacp protein K06962 K06962; uncharacterized protein
D lin2033 similar to unknown proteins K06973 K06973; uncharacterized protein
D lin0181 similar to E. coli YjdJ protein K06975 K06975; uncharacterized protein
D lin2312 lin2312 K06976 K06976; uncharacterized protein
D lin2898 similar to acylase and diesterase K06978 K06978; uncharacterized protein
D lin2531 lin2531 K07032 K07032; uncharacterized protein
D lin2249 similar to unknown protein K07035 K07035; uncharacterized protein
D lin0862 lin0862 K07045 K07045; uncharacterized protein
D lin1802 similar to CDP-abequose synthase K07071 K07071; uncharacterized protein
D lin2962 similar to yeast protein Frm2p involved in fatty acid signaling K07078 K07078; uncharacterized protein
D lin0921 similar to B. subtilis YcgR protein K07089 K07089; uncharacterized protein
D lin0630 conserved hypothetical protein K07090 K07090; uncharacterized protein
D lin2503 similar to conserved hypothetical proteins K07090 K07090; uncharacterized protein
D lin1203 conserved hypothetical protein, similar to B. subtilis YsnB protein K07095 K07095; uncharacterized protein
D lin0757 similar to unknown proteins K07098 K07098; uncharacterized protein
D lin2211 similar to unknown proteins K07098 K07098; uncharacterized protein
D lin2129 similar to unknown protein K07105 K07105; uncharacterized protein
D lin0787 similar to B. subtilis YwnB protein K07118 K07118; uncharacterized protein
D lin0805 similar to oxidoreductase K07124 K07124; uncharacterized protein
D lin1621 similar to ketoacyl reductases K07124 K07124; uncharacterized protein
D lin2083 similar to oxidoreductase K07124 K07124; uncharacterized protein
D lin0154 similar to unknown protein K07133 K07133; uncharacterized protein
D lin1770 similar to conserved hypothetical proteins K07139 K07139; uncharacterized protein
D lin0786 similar to conserved hypothetical protein K07150 K07150; uncharacterized protein
D lin1778 similar to conserved hypothetical proteins K08998 K08998; uncharacterized protein
D lin1505 similar to unknown proteins K09117 K09117; uncharacterized protein
D lin0538 similar to unknown proteins K09157 K09157; uncharacterized protein
D lin0881 similar to B. subtilis YdbS protein K09167 K09167; uncharacterized protein
D lin0474 similar to unknown proteins K09703 K09703; uncharacterized protein
D lin0759 lin0759 K09704 K09704; uncharacterized protein
D lin2121 similar to unknown proteins K09704 K09704; uncharacterized protein
D lin1363 conserved hypothetical protein similar to B. subtilis YlxP protein K09764 K09764; uncharacterized protein
D lin1493 similar to unknown proteins K09768 K09768; uncharacterized protein
D lin0711 lin0711 K09770 K09770; uncharacterized protein
D lin2485 similar to B. subtilis YuiD protein K09775 K09775; uncharacterized protein
D lin1916 similar to unknown proteins K09787 K09787; uncharacterized protein
D lin1018 similar to B. subtilis YitL protein K00243 K00243; uncharacterized protein
D lin1728 similar to hypothetical proteins K09960 K09960; uncharacterized protein
D lin1731 some similarities to conserved hypothetical proteins K09961 K09961; uncharacterized protein
D lin1829 similar to putative outer surface protein K09963 K09963; uncharacterized protein
D lin1344 highly similar to B. subtilis YneF protein K09976 K09976; uncharacterized protein
D lin0405 similar to B. subtilis YhdG protein K05937 K05937; uncharacterized protein
D lin1576 similar to unknown protein K07584 ysxB; uncharacterized protein
D lin2350 similar to unknown proteins K07220 K07220; uncharacterized protein
D lin1795 similar to hypothetical proteins K07586 ygaC; uncharacterized protein
D lin1360 similar to B. subtilis YlxR protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 24, 2024