+D GENES KO
#
KEGG Orthology (KO) - Legionella longbeachae
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:llo00010]
D LLO_2804 glk; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LLO_0884 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LLO_1234 pfp; putative PPi dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LLO_2717 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LLO_0275 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LLO_3262 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LLO_3263 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LLO_2692 gpmI; putative phosphoglycerate mutase proteins K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LLO_2520 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LLO_3264 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LLO_2054 ppsA; putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LLO_1761 aceE; Pyruvate dehydrogenase (decarboxylase component) E1p K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LLO_1760 aceF; Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_1949 putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LLO_1948 putative Simiar to 2-oxoglutarate ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LLO_2480 frmA; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LLO_1570 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LLO_0585 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LLO_3273 acsB; putative acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00020 Citrate cycle (TCA cycle) [PATH:llo00020]
D LLO_1803 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LLO_0452 putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LLO_1698 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LLO_0667 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LLO_2920 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LLO_2043 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LLO_0397 sucA; 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LLO_0398 sucB; dihydrolipoamide succinyltransferase, E2 subunit K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_1949 putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LLO_1948 putative Simiar to 2-oxoglutarate ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LLO_0400 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LLO_0399 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LLO_0664 sdhA-2; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LLO_0395 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LLO_0661 sdhB-2; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LLO_0396 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LLO_0662 sdhC-2; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LLO_0393 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LLO_0663 sdhD-2; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LLO_0394 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LLO_0080 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LLO_2851 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LLO_1761 aceE; Pyruvate dehydrogenase (decarboxylase component) E1p K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LLO_1760 aceF; Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:llo00030]
D LLO_0884 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LLO_2807 zwf; putative Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LLO_2806 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D LLO_0610 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LLO_3261 tkt; putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LLO_3323 rpiA; ribose 5-phosphate isomerase, constitutive K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D LLO_1562 putative ribose/galactose isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LLO_1786 deoC; 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D LLO_2570 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D LLO_2199 putative ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LLO_0407 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LLO_2805 edd; putative 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D LLO_2803 eda; putative 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LLO_1955 putative keto-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LLO_1657 putative short-chain dehydrogenases/reductases family protein K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D LLO_2717 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LLO_1234 pfp; putative PPi dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:llo00040]
D LLO_1162 glycoside hydrolase family 28 protein / polygalacturonase family protein K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15]
D LLO_1410 Hypothetical protein, similar to eukaryotic polygalacturonase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15]
D LLO_3155 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LLO_0885 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_3171 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_0610 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:llo00051]
D LLO_0199 cpsB; mannose-1-phosphate guanyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LLO_3061 algC; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LLO_3148 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LLO_3167 gmd; GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LLO_3173 fcl; bifunctional GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LLO_1234 pfp; putative PPi dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LLO_2717 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LLO_0275 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LLO_1562 putative ribose/galactose isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:llo00052]
D LLO_3166 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_3172 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_0382 putative NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_0885 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_3171 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_2804 glk; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LLO_1234 pfp; putative PPi dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:llo00053]
D LLO_3155 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LLO_3180 capI; Protein capI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:llo00500]
D LLO_0885 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_3171 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_0220 rfbF; Glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase) K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LLO_2801 putative glucoamylase precursor (Glucan 1,4-alpha-glucosidase) K01178 SGA1; glucoamylase [EC:3.2.1.3]
D LLO_3440 treF; Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D LLO_2804 glk; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LLO_0884 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:llo00520]
D LLO_0050 putative glycosyl hydrolases family 18 protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D LLO_1023 putative N-acetyl-beta-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LLO_0330 nagZ; beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LLO_2462 putative glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LLO_1006 Hypothetical N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D LLO_0211 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LLO_0274 msrA; putative phosphoglucomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D LLO_0190 glmU; Bifunctional GlmU protein, UDP-N-acetylglucosamine pyrophosphorylase and Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LLO_1491 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D LLO_0466 putative conserved hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D LLO_0465 putative nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D LLO_2016 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LLO_2755 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LLO_0217 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LLO_1795 putative polysaccharide biosynthesis protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D LLO_0383 capL; Protein capL K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D LLO_0236 putative NAD dependent epimerase/dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D LLO_2804 glk; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LLO_0885 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_3171 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_3155 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LLO_3166 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_3172 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_0382 putative NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_3180 capI; Protein capI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D LLO_0884 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LLO_3061 algC; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LLO_3148 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LLO_0199 cpsB; mannose-1-phosphate guanyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LLO_3167 gmd; GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LLO_3173 fcl; bifunctional GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LLO_0220 rfbF; Glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase) K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LLO_0219 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D LLO_0085 putative C-terminal part of NAD(P)H-flavin reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:llo00620]
D LLO_3273 acsB; putative acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LLO_1949 putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LLO_1948 putative Simiar to 2-oxoglutarate ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LLO_1761 aceE; Pyruvate dehydrogenase (decarboxylase component) E1p K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LLO_1760 aceF; Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_1570 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LLO_2480 frmA; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LLO_0585 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LLO_2360 ackA; Acetate kinase (Acetokinase) K00925 ackA; acetate kinase [EC:2.7.2.1]
D LLO_2361 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LLO_3264 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LLO_2068 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LLO_2724 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LLO_2725 accC; Biotin carboxylase (A subunit of acetyl-CoA carboxylase) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LLO_2342 accD; putative acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LLO_1028 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LLO_1357 poxB; pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D LLO_3427 putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LLO_1163 gloB; putative hydroxyacylglutathione hydrolase (glyoxalase II) K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D LLO_0659 putative NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LLO_1147 sfcA; malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LLO_0429 sfcA; malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LLO_2561 putative NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LLO_2851 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LLO_0080 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LLO_2986 capP; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LLO_2054 ppsA; putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:llo00630]
D LLO_3273 acsB; putative acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LLO_2851 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LLO_1803 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LLO_0452 putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LLO_1698 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LLO_0667 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LLO_2920 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_0418 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LLO_0419 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LLO_p0045 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LLO_1355 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D LLO_1420 putative 2-hydroxyacid dehydrogenase, D-isomer specific K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D LLO_0589 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LLO_2367 HAD-superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LLO_1111 putative glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1450 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_0824 glyA; putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_1614 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_3295 gcsA; putative glycine dehydrogenase [decarboxylating] subunit 1 (glycine decarboxylase) (glycine cleavage system P-protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LLO_3297 gcsB; putative glycine dehydrogenase [decarboxylating] subunit 2 (glycine decarboxylase) (glycine cleavage system P-protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LLO_3293 gcvT; putative glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_3294 gcvH; putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LLO_2803 eda; putative 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LLO_1955 putative keto-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LLO_1668 putative NAD+-dependent formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D LLO_3000 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:llo00640]
D LLO_3273 acsB; putative acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LLO_2360 ackA; Acetate kinase (Acetokinase) K00925 ackA; acetate kinase [EC:2.7.2.1]
D LLO_2361 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LLO_1519 odpA; pyruvate dehydrogenase E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LLO_1518 putative pyruvate dehydrogenase E1 (beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LLO_0636 putative pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LLO_1517 odp; branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_2068 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LLO_2724 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LLO_2725 accC; Biotin carboxylase (A subunit of acetyl-CoA carboxylase) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LLO_2342 accD; putative acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LLO_0399 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LLO_0400 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LLO_3271 mmsA; methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH), oxidoreductase protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LLO_1556 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D LLO_1557 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D LLO_1555 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:llo00650]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_2331 fadB; 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_0892 paaF; enoyl-CoA hydratase-isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D LLO_2729 putative poly-beta-hydroxybutyrate synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LLO_2383 phbC; PHA synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LLO_2080 phbC; PHA synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LLO_2416 putative poly(3-hydroxybutyrate) depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D LLO_0418 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LLO_0419 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LLO_p0045 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LLO_0664 sdhA-2; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LLO_0395 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LLO_0661 sdhB-2; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LLO_0396 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LLO_0662 sdhC-2; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LLO_0393 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LLO_0663 sdhD-2; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LLO_0394 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LLO_2994 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LLO_1805 yneI; putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LLO_1949 putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LLO_1948 putative Simiar to 2-oxoglutarate ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LLO_1073 mvaB; Hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase) K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LLO_1072 acsA; acetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D LLO_0620 putative 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D LLO_1749 putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D LLO_0619 putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D LLO_3139 budB; putative acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:llo00660]
D LLO_3139 budB; putative acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LLO_3024 cat; 4-hydroxybutyrate coenzyme A transferase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D LLO_0399 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LLO_0400 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LLO_3026 putative MaoC-like dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D LLO_3025 putative citrate lyase beta subunit K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
C 00562 Inositol phosphate metabolism [PATH:llo00562]
D LLO_2306 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LLO_2235 iolG; putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D LLO_2232 iolE; putative myo-inositol catabolism protein iolE K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D LLO_2233 iolD; putative malonic semialdehyde oxidative decarboxylase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D LLO_2234 iolCB; Bifuncional protein similar to IolC (sugar kinase) and IolB K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D LLO_3271 mmsA; methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH), oxidoreductase protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LLO_0275 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:llo00190]
D LLO_0277 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D LLO_0278 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D LLO_0279 nuoC; NADH dehydrogenase I chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D LLO_0280 nuoD; NADH dehydrogenase I chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D LLO_0281 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D LLO_0282 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D LLO_0283 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D LLO_0284 nuoH; NADH-quinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D LLO_0285 nuoI; NADH-quinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D LLO_0286 nuoJ; NADH-quinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D LLO_0287 nuoK; NADH-quinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D LLO_0288 nuoL; NADH-quinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D LLO_0289 nuoM; NADH-quinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D LLO_0290 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D LLO_2303 ndh; respiratory NADH dehydrogenase 2/cupric reductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D LLO_0664 sdhA-2; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LLO_0395 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LLO_0661 sdhB-2; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LLO_0396 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LLO_0662 sdhC-2; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LLO_0393 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LLO_0663 sdhD-2; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LLO_0394 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LLO_0347 petA; putative ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LLO_0348 petB; putative ubiquinol--cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LLO_0349 petC; putative ubiquinol-cytochrome c oxydoreductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LLO_2813 putative Polyprenyltransferase (cytochrome oxidase assembly factor) K02257 COX10; heme o synthase [EC:2.5.1.141]
D LLO_0154 coxC; cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D LLO_0152 coxA; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D LLO_0151 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D LLO_0153 ctaG; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LLO_2814 putative conserved hypothetical proteins, hypothetical cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LLO_2593 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LLO_2120 qxtA; putative cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LLO_2594 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LLO_2119 qxtB; putative cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LLO_3421 atpA; F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LLO_3419 atpD; putative H+-transporting ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LLO_3420 atpG; putative H+-transporting ATP synthase chain gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LLO_3422 atpH; F1 sector of membrane-bound ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LLO_3418 atpC; putative H+-transporting ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LLO_3425 atpB; putative H+-transporting ATP synthase chain a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LLO_3423 atpF; putative H+-transporting ATP synthase chain b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LLO_3424 atpE; putative H+-transporting ATP synthase chain c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LLO_0321 atpA; V-type ATP synthase alpha chain 1 (V-type ATPase subunit A 1) K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D LLO_0315 atpB; V-type ATP synthase beta chain (V-type ATPase subunit B) K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D LLO_0316 putative V-type ATP synthase, subunit d K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D LLO_0317 putative V-type ATP synthase, subunit i K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D LLO_0318 putative V-type ATP synthase, subunit k K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D LLO_0300 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D LLO_0460 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:llo00680]
D LLO_2480 frmA; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LLO_2479 frmC; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D LLO_1668 putative NAD+-dependent formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D LLO_0824 glyA; putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_1614 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_1420 putative 2-hydroxyacid dehydrogenase, D-isomer specific K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D LLO_2520 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LLO_2986 capP; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LLO_2851 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LLO_2717 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LLO_1234 pfp; putative PPi dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LLO_2360 ackA; Acetate kinase (Acetokinase) K00925 ackA; acetate kinase [EC:2.7.2.1]
D LLO_2361 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LLO_3273 acsB; putative acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LLO_2054 ppsA; putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LLO_2692 gpmI; putative phosphoglycerate mutase proteins K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LLO_0726 putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LLO_3163 putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LLO_1801 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LLO_0727 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D LLO_2358 putative pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00910 Nitrogen metabolism [PATH:llo00910]
D LLO_1387 putative nitric oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D LLO_0790 putative 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D LLO_1804 putative NADP-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LLO_0794 putative C-terminal part of conserved hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LLO_1111 putative glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1450 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_0795 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LLO_0804 putative inorganic transporter and to carbonic anhydrase (bi-functional) K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LLO_2551 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LLO_1356 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:llo00920]
D LLO_0076 cysK; putative cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LLO_3181 putative alpha/beta hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:llo00061]
D LLO_2068 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LLO_2724 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LLO_2725 accC; Biotin carboxylase (A subunit of acetyl-CoA carboxylase) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LLO_2342 accD; putative acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LLO_1484 acp; Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D LLO_2612 putative acyl-carrier protein K02078 acpP; acyl carrier protein
D LLO_1482 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LLO_1481 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LLO_0544 putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LLO_2604 putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LLO_2609 fabH; 3-oxoacyl-(acyl carrier protein) synthase III FabH K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LLO_0523 putative 3-oxoacyl-[acyl-carrier-protein] synthase beta chain K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LLO_0522 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_1485 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP synthase II) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_3313 fabF-2; putative 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_1483 fabG; 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LLO_2608 fabG; 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LLO_2685 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein]dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LLO_1044 fabI; putative Enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LLO_0314 fabI; enoyl-[acyl-carrier-protein] reductase, NADH-dependent K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LLO_0519 putative 3-oxoacyl-[acyl-carrier protein] reductase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D LLO_2606 putative acyl CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_1522 lidS; putative acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:llo00071]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_2330 fadA; putative 3-ketoacyl-CoA thiolase (thiolase I, acetyl-CoA transferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_2331 fadB; 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LLO_2258 fadE; acyl coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D LLO_0463 fadE; acyl coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D LLO_0637 gcdH; putative glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LLO_2606 putative acyl CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_1522 lidS; putative acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_2730 aas; fused 2-acylglycerophospho-ethanolamine acyl transferase; acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D LLO_2382 putative alkane monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D LLO_2480 frmA; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LLO_1570 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:llo00100]
D LLO_1320 DWF; 7-dehydrocholesterol reductase (7-DHC reductase) (Sterol Delta(7)-reductase) (Protein DWARF 5) K00213 DHCR7; 7-dehydrocholesterol reductase [EC:1.3.1.21]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:llo00561]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LLO_0585 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LLO_1500 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LLO_1480 plsX; Fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LLO_2853 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LLO_0414 plsC; 1-acyl-sn-glycerol-3-phosphate acetyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LLO_3044 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:llo00564]
D LLO_0575 gpsA; putative glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D LLO_1499 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D LLO_2853 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LLO_0414 plsC; 1-acyl-sn-glycerol-3-phosphate acetyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LLO_3044 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LLO_3378 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LLO_0606 ugpQ; glycerophosphodiester phosphodiesterase, cytosolic K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LLO_2730 aas; fused 2-acylglycerophospho-ethanolamine acyl transferase; acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D LLO_3400 putative methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D LLO_2690 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LLO_1806 lidK; putative phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D LLO_2713 pssA; putative CDP-diacylglycerol-serine O-phosphatidyltransferase (Phosphatidylserine synthase) K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LLO_3404 psd; Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D LLO_0590 pgsA; putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LLO_0828 pgpA; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D LLO_0269 putative phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:llo00592]
D LLO_2330 fadA; putative 3-ketoacyl-CoA thiolase (thiolase I, acetyl-CoA transferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:llo01040]
D LLO_2291 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LLO_0417 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LLO_2117 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LLO_0213 yciA; putative hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:llo00230]
D LLO_2570 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D LLO_2199 putative ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LLO_0407 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LLO_3278 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LLO_3279 purD; Phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D LLO_3280 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LLO_3274 purL; Phosphoribosylformylglycinamidine synthase II (FGAM synthase II) K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D LLO_3276 purQ; Phosphoribosylformylglycinamidine synthase I (FGAM synthase I) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LLO_3275 purM; Phosphoribosylformylglycinamidine cyclo ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D LLO_3281 purE; Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D LLO_3277 purC; Phosphoribosylamidoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D LLO_2055 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LLO_2727 purH; putative phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase (bifunctionnal) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LLO_1149 surE; Acid phosphatase SurE (Stationary phase survival protein) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LLO_1785 xapA; putative xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LLO_2347 putative conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LLO_1593 putative pyrimidine phosphoribosyl transferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D LLO_0205 putative guanosine monophosphate reductase GuaC K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LLO_2252 guaB; putative IMP dehydrogenase/GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LLO_1528 ndk; putative nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LLO_3056 yggV; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D LLO_2251 guaA; putative GMP synthetase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LLO_0906 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D LLO_1440 rir1; putative ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LLO_1439 rir2; putative ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LLO_1271 putative dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D LLO_0908 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LLO_1756 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D LLO_1197 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_1216 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_0181 putative adenylate/guanylate cyclase transmembrane protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_2196 putative adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_1751 putative adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_1669 putative adenylate/guanilate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_0532 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_0753 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_3304 putative guanylate/adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LLO_0671 putative 3',5'-cyclic-nucleotide phosphodiesterase precursor (CpdP) K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D LLO_2700 purA; Adenylosuccinate synthetase (IMP--aspartate ligase) (AdSS) (AMPSase) K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LLO_2699 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D LLO_2743 add; putative adenosine deaminase protein K01488 add; adenosine deaminase [EC:3.5.4.4]
D LLO_3099 add; Adenosine deaminase 2 (Adenosine aminohydrolase 2) K21053 ade; adenine deaminase [EC:3.5.4.2]
D LLO_1497 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LLO_0128 apaH; putative bis(5'-nucleosyl)-tetraphosphatase ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
C 00240 Pyrimidine metabolism [PATH:llo00240]
D LLO_3088 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LLO_2503 carA; carbamoyl-phosphate synthetase, glutamine (small subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LLO_2738 pyrB; putative aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LLO_0064 pyrC; putative dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D LLO_1081 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D LLO_1309 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D LLO_1794 pyrF; orotidine 5`-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D LLO_1718 pyrH; Uridylate kinase (UK) (Uridine monophosphate kinase) K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D LLO_1528 ndk; putative nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LLO_2519 putative septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D LLO_3203 yhdE; putative septum formation protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D LLO_1039 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D LLO_1799 kcy; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D LLO_1045 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D LLO_0005 putative uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D LLO_1149 surE; Acid phosphatase SurE (Stationary phase survival protein) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LLO_2617 upp; putative uracil phosphoribosyltransferase (upp) K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D LLO_0449 indA; Indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D LLO_1784 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D LLO_2521 FCA; Cytosine deaminase (Cytosine aminohydrolase) K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D LLO_0072 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D LLO_1440 rir1; putative ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LLO_1439 rir2; putative ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LLO_1487 tmk; putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D LLO_3062 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP pyrophosphatase) K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LLO_2198 putative thymidine/pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D LLO_0019 tdk; putative thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D LLO_0184 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LLO_0454 ydfG; L-allo-threonine dehydrogenase, NAD(P)-binding K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:llo00250]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_2056 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LLO_3361 putative amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D LLO_0188 asg; putative L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LLO_2535 iaaA; isoaspartyl dipeptidase with L-asparaginase activity K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LLO_0686 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D LLO_1878 putative asparagine synthase, glutamine-hydrolyzing protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LLO_3211 putative asparagine synthetase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LLO_0869 ald; putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LLO_2277 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LLO_2276 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LLO_2700 purA; Adenylosuccinate synthetase (IMP--aspartate ligase) (AdSS) (AMPSase) K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LLO_2055 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LLO_2738 pyrB; putative aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LLO_2994 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LLO_1805 yneI; putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LLO_1804 putative NADP-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LLO_0794 putative C-terminal part of conserved hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LLO_1700 putA; putative bifunctional PutA protein (proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LLO_1111 putative glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1450 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_3088 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LLO_2503 carA; carbamoyl-phosphate synthetase, glutamine (small subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LLO_3142 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LLO_3276 purQ; Phosphoribosylformylglycinamidine synthase I (FGAM synthase I) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LLO_0211 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LLO_3278 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:llo00260]
D LLO_1101 lysAC; putative diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LLO_0582 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LLO_0824 glyA; putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_1614 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_1420 putative 2-hydroxyacid dehydrogenase, D-isomer specific K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D LLO_2692 gpmI; putative phosphoglycerate mutase proteins K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LLO_0726 putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LLO_3163 putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LLO_1801 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LLO_0727 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D LLO_0454 ydfG; L-allo-threonine dehydrogenase, NAD(P)-binding K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D LLO_0808 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LLO_0809 tdh; threonine dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D LLO_3295 gcsA; putative glycine dehydrogenase [decarboxylating] subunit 1 (glycine decarboxylase) (glycine cleavage system P-protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LLO_3297 gcsB; putative glycine dehydrogenase [decarboxylating] subunit 2 (glycine decarboxylase) (glycine cleavage system P-protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LLO_3293 gcvT; putative glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_3294 gcvH; putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LLO_2713 pssA; putative CDP-diacylglycerol-serine O-phosphatidyltransferase (Phosphatidylserine synthase) K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LLO_2065 sdhL; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LLO_1174 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LLO_1173 trpB; tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:llo00270]
D LLO_0076 cysK; putative cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LLO_0841 metB; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LLO_2502 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LLO_2347 putative conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LLO_1088 putative adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LLO_2501 sahH; Adenosylhomocysteinase (S-adenosyl-L-homocysteinehydrolase) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LLO_1453 putative 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D LLO_1101 lysAC; putative diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LLO_0582 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LLO_3181 putative alpha/beta hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LLO_1050 gshA; Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LLO_1051 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_2851 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LLO_2065 sdhL; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LLO_0726 putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LLO_3163 putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LLO_1801 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LLO_2374 putative ParB-like nuclease K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226]
C 00280 Valine, leucine and isoleucine degradation [PATH:llo00280]
D LLO_0604 putative leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D LLO_1519 odpA; pyruvate dehydrogenase E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LLO_1518 putative pyruvate dehydrogenase E1 (beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LLO_0636 putative pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LLO_1517 odp; branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_1079 putative acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_2330 fadA; putative 3-ketoacyl-CoA thiolase (thiolase I, acetyl-CoA transferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LLO_3272 putative 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D LLO_3271 mmsA; methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH), oxidoreductase protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LLO_1074 mccA; acyl CoA carboxylase subunit alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D LLO_1076 putative Acetyl/propionyl-CoA carboxylase, beta subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D LLO_1075 putative enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D LLO_1073 mvaB; Hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase) K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LLO_1072 acsA; acetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:llo00290]
D LLO_3139 budB; putative acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LLO_0604 putative leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:llo00300]
D LLO_1101 lysAC; putative diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LLO_0582 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LLO_0622 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LLO_3269 dapB; putative dihydrodipicolinate reductase proteins K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D LLO_0840 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D LLO_0059 argD; putative ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LLO_0839 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LLO_0526 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LLO_0858 murE; putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LLO_2760 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LLO_2162 putative alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:llo00310]
D LLO_2332 putative aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D LLO_0398 sucB; dihydrolipoamide succinyltransferase, E2 subunit K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_0637 gcdH; putative glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1805 yneI; putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LLO_3108 putative FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:llo00220]
D LLO_3018 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D LLO_2277 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LLO_2276 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LLO_3142 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LLO_3276 purQ; Phosphoribosylformylglycinamidine synthase I (FGAM synthase I) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LLO_1111 putative glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1450 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1804 putative NADP-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LLO_0794 putative C-terminal part of conserved hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_0059 argD; putative ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LLO_2402 putative acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:llo00330]
D LLO_2521 FCA; Cytosine deaminase (Cytosine aminohydrolase) K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D LLO_0013 speA; putative biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D LLO_0012 putative peptidylarginine deiminase and related enzymes K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D LLO_0014 putative carbon-nitrogen hydrolase family protein K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LLO_1671 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_1667 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_1709 astA; arginine N-succinyltransferase, beta chain K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D LLO_1711 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D LLO_1710 astD; Succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D LLO_0883 putative pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D LLO_1700 putA; putative bifunctional PutA protein (proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LLO_3193 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LLO_3194 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D LLO_1054 putative proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:llo00340]
D LLO_1304 hisG; ATP phosphoribosyltransferase HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D LLO_1297 hisI; phosphoribosyl-AMP cyclohydrolase (PRA-CH) / phosphoribosyl-ATP pyrophosphatase (PRA-PH) K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D LLO_1299 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D LLO_1300 hisH; Imidazole glycerol phosphate synthase subunit HisH (IGP synthase glutamine amidotransferase subunit) K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D LLO_1298 hisF; Imidazole glycerol phosphate synthase subunit HisF (IGP synthase cyclase subunit) K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D LLO_1301 hisB; histidinol-phosphatase/imisazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D LLO_1342 hisC-2; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_1302 hisC; Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase) K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_1303 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D LLO_1470 hutH; putative histidine ammonia-lyase (Histidase) K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D LLO_1469 hutU; putative urocanate hydratase (urocanase) (imidazolonepropionate hydrolase) K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D LLO_0815 hutI; putative imidazolone-5-propionate hydrolase HutI K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D LLO_0813 hutG; putative formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:llo00350]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1342 hisC-2; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_1302 hisC; Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase) K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_0602 lly; 4-hydroxyphenylpyruvate dioxygenase (legiolysin) K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LLO_1153 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D LLO_0600 putative glutathione S-transferase (maleylacetoacetate isomerase) K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D LLO_0601 putative unknown protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D LLO_2358 putative pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D LLO_2480 frmA; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LLO_1570 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LLO_1805 yneI; putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:llo00360]
D LLO_2654 phhA; putative phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1342 hisC-2; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_1302 hisC; Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase) K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_0602 lly; 4-hydroxyphenylpyruvate dioxygenase (legiolysin) K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LLO_1671 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_1667 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_0366 putative 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:llo00380]
D LLO_3034 putative kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D LLO_1994 putative kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D LLO_0398 sucB; dihydrolipoamide succinyltransferase, E2 subunit K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_0637 gcdH; putative glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LLO_1671 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_1667 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_1355 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:llo00400]
D LLO_1327 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LLO_2507 putative 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LLO_0880 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D LLO_2723 aroQ; 3-dehydroquinate dehydratase type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D LLO_0262 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D LLO_0879 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D LLO_1636 putative shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D LLO_1800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D LLO_0581 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D LLO_2028 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LLO_2266 trpE; Anthranilate synthase K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D LLO_2029 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D LLO_1172 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D LLO_2030 trpC; indole-3-glycerol phosphate synthases K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D LLO_1174 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LLO_1173 trpB; tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LLO_1325 putative chorismate mutase (C-terminal part) K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D LLO_1326 putative chorismate mutase (N-terminal part) K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1342 hisC-2; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_1302 hisC; Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase) K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_2654 phhA; putative phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:llo00410]
D LLO_0125 panD; putative aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LLO_2358 putative pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D LLO_2994 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LLO_0385 panC; putative pantothenate synthetases K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_3271 mmsA; methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH), oxidoreductase protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:llo00430]
D LLO_2994 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LLO_0410 putative Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LLO_0869 ald; putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LLO_1804 putative NADP-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LLO_0794 putative C-terminal part of conserved hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LLO_2361 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LLO_2360 ackA; Acetate kinase (Acetokinase) K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:llo00450]
D LLO_0841 metB; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LLO_3069 sufS; selenocysteine lyase, PLP-dependent K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D LLO_1993 putative aminotransferase class-V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D LLO_2325 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LLO_0196 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:llo00460]
D LLO_0410 putative Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LLO_0188 asg; putative L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LLO_2535 iaaA; isoaspartyl dipeptidase with L-asparaginase activity K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LLO_0686 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D LLO_0824 glyA; putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_1614 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:llo00470]
D LLO_0836 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D LLO_2162 putative alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D LLO_2754 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LLO_3142 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LLO_3276 purQ; Phosphoribosylformylglycinamidine synthase I (FGAM synthase I) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LLO_0572 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LLO_2758 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LLO_3361 putative amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D LLO_0526 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LLO_1101 lysAC; putative diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
C 00480 Glutathione metabolism [PATH:llo00480]
D LLO_0410 putative Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LLO_1875 ybdK; gamma-glutamyl:cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LLO_3209 putative glutamate-cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LLO_2171 putative carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LLO_0336 putative glutamate-cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LLO_3201 conserved hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LLO_1050 gshA; Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LLO_1051 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LLO_2635 pepA; putative leucine aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LLO_2639 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LLO_0259 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LLO_1598 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LLO_1239 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LLO_2625 gor; Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D LLO_2043 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LLO_2807 zwf; putative Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LLO_0440 btuE; putative glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:llo00540]
D LLO_2684 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LLO_2750 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LLO_2686 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LLO_3315 lpxD; putative UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LLO_1524 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LLO_1461 lpxB; putative lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LLO_1085 lpxK; putative tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LLO_2023 kdsD; putative arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LLO_1040 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LLO_2024 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LLO_3306 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LLO_0556 kdtA; 3-Deoxy-D-manno-oct-2-ulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LLO_0524 waaM; putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LLO_2242 putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LLO_0052 putative Rcp protein, confers resistance to cationic antimicrobial peptides and promotes intracellular infection K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D LLO_3434 yraO; DnaA initiator-associating factor for replication initiation K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LLO_2039 putative O-antigen biosynthesis protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:llo00541]
D LLO_0885 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_3171 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LLO_3166 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_3172 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_0382 putative NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LLO_3155 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LLO_3180 capI; Protein capI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D LLO_0235 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LLO_0220 rfbF; Glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase) K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LLO_0219 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D LLO_0085 putative C-terminal part of NAD(P)H-flavin reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D LLO_0199 cpsB; mannose-1-phosphate guanyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LLO_3061 algC; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LLO_3148 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D LLO_3167 gmd; GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LLO_3173 fcl; bifunctional GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LLO_0190 glmU; Bifunctional GlmU protein, UDP-N-acetylglucosamine pyrophosphorylase and Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LLO_0217 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LLO_0236 putative NAD dependent epimerase/dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D LLO_0383 capL; Protein capL K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D LLO_1795 putative polysaccharide biosynthesis protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:llo00550]
D LLO_2016 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LLO_2755 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LLO_2756 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LLO_2758 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LLO_0858 murE; putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LLO_2754 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LLO_2760 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LLO_2162 putative alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D LLO_2691 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LLO_2759 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LLO_2051 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LLO_0872 mrcA; putative peptidoglycan synthetase; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LLO_1606 pbpC; penicillin binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LLO_1465 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LLO_0857 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LLO_1766 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LLO_1564 putative D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LLO_2621 putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:llo00552]
D LLO_2455 LicD family protein (phosphorylcholine metabolism) K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:llo00543]
D LLO_0412 putative glycosyltransferase, family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:llo00730]
D LLO_2038 thiD; bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D LLO_0924 thiDE; putative phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D LLO_2308 IscS; putative similar cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LLO_0921 thiO; putative thiamine biosynthesis oxidoreductase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D LLO_0923 thiG; putative thiamine biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D LLO_1024 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LLO_0827 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D LLO_0309 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LLO_3112 putative thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D LLO_1497 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:llo00740]
D LLO_1038 ribA; Riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LLO_1037 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LLO_1262 putative 6,7-dimethyl-8-ribityllumazine synthase (Riboflavinsynthase) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LLO_1263 putative 6,7-dimethyl-8-ribityllumazine synthase (Riboflavinsynthase) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LLO_0215 ribE; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D LLO_1960 ribF; Riboflavin biosynthesis protein RibF (Riboflavin kinase/FMN adenylyltransferase) K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D LLO_1024 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LLO_3128 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:llo00750]
D LLO_2674 putative pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D LLO_0401 pdxH; putative pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D LLO_0860 pdxB; putative erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D LLO_1801 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LLO_0469 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D LLO_1950 pdxJ; Pyridoxal phosphate biosynthetic protein pdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:llo00760]
D LLO_2056 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LLO_2057 nadA; putative quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D LLO_2052 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D LLO_0782 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D LLO_1785 xapA; putative xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LLO_1149 surE; Acid phosphatase SurE (Stationary phase survival protein) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LLO_2338 nadD; nicotinate-nucleotide adenylyltransferase NadD K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D LLO_3037 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D LLO_0832 nadE; glutamine dependent NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D LLO_1116 cinA; Competence-damage inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D LLO_0781 pncA; nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D LLO_0250 putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LLO_2472 pntA; pyridine nucleotide transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LLO_2473 pnaB; NAD(P) transhydrogenase subunit beta (Pyridine nucleotide transhydrogenase subunit alpha II) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LLO_3197 putative NAD(P) transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LLO_2474 pntB; NAD(P) transhydrogenase subunit beta (Pyridine nucleotide transhydrogenase subunit beta) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D LLO_1805 yneI; putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:llo00770]
D LLO_3139 budB; putative acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LLO_0386 panB; putative 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D LLO_0385 panC; putative pantothenate synthetases K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LLO_0853 coaX; pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D LLO_3063 dfp; putative DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D LLO_0409 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D LLO_1736 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D LLO_2069 putative phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D LLO_0125 panD; putative aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LLO_2358 putative pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:llo00780]
D LLO_0564 bioC; biotin synthase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D LLO_0523 putative 3-oxoacyl-[acyl-carrier-protein] synthase beta chain K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LLO_0522 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_1485 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP synthase II) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_3313 fabF-2; putative 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_1483 fabG; 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LLO_2608 fabG; 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LLO_2685 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein]dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LLO_1044 fabI; putative Enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LLO_0314 fabI; enoyl-[acyl-carrier-protein] reductase, NADH-dependent K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LLO_1730 bioH; Biotin biosynthesis protein BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D LLO_1731 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LLO_3178 putative aminotransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LLO_1733 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LLO_1729 bioD; Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D LLO_1732 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D LLO_2070 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:llo00785]
D LLO_1768 lssX; Legionella secretion system protein X K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D LLO_2076 lipA; Lipoic acid synthetase LipA K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_1761 aceE; Pyruvate dehydrogenase (decarboxylase component) E1p K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LLO_1760 aceF; Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LLO_0397 sucA; 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LLO_0398 sucB; dihydrolipoamide succinyltransferase, E2 subunit K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LLO_1519 odpA; pyruvate dehydrogenase E1 alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LLO_1518 putative pyruvate dehydrogenase E1 (beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LLO_0636 putative pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LLO_1517 odp; branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LLO_3295 gcsA; putative glycine dehydrogenase [decarboxylating] subunit 1 (glycine decarboxylase) (glycine cleavage system P-protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LLO_3297 gcsB; putative glycine dehydrogenase [decarboxylating] subunit 2 (glycine decarboxylase) (glycine cleavage system P-protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LLO_3293 gcvT; putative glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LLO_3294 gcvH; putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:llo00790]
D LLO_0298 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D LLO_2512 putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D LLO_1547 folK; putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D LLO_0273 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D LLO_0470 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LLO_2341 folC; putative dihydrofolate:folylpolyglutamate synthetase FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D LLO_1038 ribA; Riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LLO_1520 pabB; putative para-aminobenzoate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D LLO_2731 putative aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D LLO_0174 putative unknown protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LLO_1341 putative pterin-4-alpha-carbinolamine dehydratase phhB K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LLO_2654 phhA; putative phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LLO_0172 phaB; pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D LLO_0725 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LLO_0198 putative transcriptional regulator ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LLO_0515 putative GTP cyclohydrolase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:llo00670]
D LLO_0470 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LLO_1166 FolD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LLO_0824 glyA; putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_1614 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LLO_3280 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LLO_2727 purH; putative phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase (bifunctionnal) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LLO_0629 fmt; putative methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LLO_3293 gcvT; putative glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LLO_0184 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LLO_3000 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D LLO_2733 fthC; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:llo00860]
D LLO_1236 gltX; Glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LLO_0560 hemA; glutamyl tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D LLO_1552 hemL; putative glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LLO_1105 hemB; putative delta-aminolevulinic acid dehydratases (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LLO_0325 hemC; Porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D LLO_0324 hemD; Uroporphyrinogen-III synthetase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D LLO_2510 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D LLO_1316 hemF; oxygen-dependent coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D LLO_1550 putative conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D LLO_2798 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D LLO_0323 hemX; uroporphyrinogen III methylase HemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D LLO_2813 putative Polyprenyltransferase (cytochrome oxidase assembly factor) K02257 COX10; heme o synthase [EC:2.5.1.141]
D LLO_2814 putative conserved hypothetical proteins, hypothetical cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LLO_1003 putative bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:llo00130]
D LLO_1788 ubiA; putative 4-hydroxybenzoate-octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LLO_0084 ubiD; putative 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D LLO_3128 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LLO_3336 visC; putative oxidoreductase with FAD/NAD(P)-binding domain K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D LLO_1704 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D LLO_3337 ubiH; putative 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D LLO_0145 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D LLO_0058 putative ubiquinone biosynthesis protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D LLO_1027 ydiI; putative esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D LLO_2566 wrbA; putative flavoprotein WrbA (Trp repressor binding protein) K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LLO_0602 lly; 4-hydroxyphenylpyruvate dioxygenase (legiolysin) K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:llo00900]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_2093 mvaA; hydroxymethylglutaryl CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D LLO_2084 putative mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D LLO_2085 putative diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D LLO_3128 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LLO_0238 fni; isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D LLO_0566 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LLO_2666 ispB; putative octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LLO_3345 ispB-2; putative octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LLO_2691 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:llo00907]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_1073 mvaB; Hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase) K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LLO_2330 fadA; putative 3-ketoacyl-CoA thiolase (thiolase I, acetyl-CoA transferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D LLO_3261 tkt; putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
D LLO_3253 protein containing FG-GAP repeats (motif found in alpha integrins) K21162 sgcE4; enediyne biosynthesis protein E4
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D LLO_0235 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:llo01054]
D LLO_3361 putative amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D LLO_3101 putative beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:llo00332]
D LLO_3193 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LLO_3194 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:llo00261]
D LLO_1101 lysAC; putative diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LLO_0582 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LLO_0622 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LLO_3269 dapB; putative dihydrodipicolinate reductase proteins K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:llo00521]
D LLO_2804 glk; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LLO_2306 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LLO_2235 iolG; putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D LLO_0235 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D LLO_2804 glk; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:llo00401]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1342 hisC-2; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_1302 hisC; Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase) K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D LLO_2028 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D LLO_1482 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LLO_1483 fabG; 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LLO_2608 fabG; 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LLO_1044 fabI; putative Enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LLO_0314 fabI; enoyl-[acyl-carrier-protein] reductase, NADH-dependent K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:llo00998]
D LLO_1484 acp; Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D LLO_2612 putative acyl-carrier protein K02078 acpP; acyl carrier protein
D LLO_2375 putative cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:llo00999]
D LLO_2502 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LLO_0262 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites [PATH:llo00997]
D LLO_2212 putative pyoverdine biosynthesis protein PvcA K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24]
D LLO_2224 putative pyoverdine biosynthesis protein K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24]
D LLO_2213 putative pyoverdine biosynthesis protein PvcB K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10]
D LLO_2375 putative cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D LLO_3129 FrgA; siderophore biosynthetic enzyme FrgA K23447 sfnaB; staphyloferrin A synthase [EC:6.3.2.57]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:llo00362]
D LLO_2330 fadA; putative 3-ketoacyl-CoA thiolase (thiolase I, acetyl-CoA transferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LLO_0366 putative 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LLO_2331 fadB; 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LLO_0637 gcdH; putative glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:llo00627]
D LLO_1671 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_1667 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_1028 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D LLO_3128 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:llo00625]
D LLO_1570 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LLO_2480 frmA; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LLO_2488 ywdH; putative aldehyde dehydrogenase ywdH K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D LLO_2271 dehII; Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D LLO_1586 haloacid dehalogenase-like hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D LLO_2271 dehII; Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D LLO_1586 haloacid dehalogenase-like hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
D LLO_0366 putative 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation [PATH:llo00633]
D LLO_2142 nemA; N-ethylmaleimide reductase, FMN-linked K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D LLO_2330 fadA; putative 3-ketoacyl-CoA thiolase (thiolase I, acetyl-CoA transferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:llo00643]
D LLO_1153 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D LLO_0600 putative glutathione S-transferase (maleylacetoacetate isomerase) K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D LLO_0601 putative unknown protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D LLO_1671 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LLO_1667 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:llo00930]
D LLO_2382 putative alkane monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D LLO_1816 yfcX; enoyl CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D LLO_0366 putative 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation [PATH:llo00626]
D LLO_1570 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LLO_2480 frmA; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:llo03020]
D LLO_0479 rpoB; RNA polymerase B-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LLO_0480 rpoC; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LLO_0510 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LLO_0907 rpoZ; RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D LLO_1859 putative DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:llo03010]
D LLO_1798 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LLO_1720 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LLO_0492 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LLO_0509 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LLO_0503 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LLO_1812 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LLO_0482 rpsL; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LLO_0500 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LLO_0346 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LLO_0485 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LLO_0508 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LLO_0481 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LLO_0507 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LLO_0499 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LLO_0296 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LLO_2842 rpsP; putative 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LLO_0495 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LLO_1811 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LLO_0490 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LLO_2642 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LLO_2855 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LLO_0476 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LLO_0489 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LLO_0486 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LLO_0487 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LLO_0498 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LLO_0501 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LLO_0478 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LLO_1809 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LLO_0477 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LLO_0475 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LLO_0345 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LLO_0496 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LLO_0505 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LLO_0493 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LLO_0511 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LLO_0502 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LLO_2839 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LLO_0340 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LLO_2662 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LLO_0491 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LLO_0488 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LLO_0497 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LLO_2663 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D LLO_2661 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LLO_2707 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LLO_0494 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LLO_0504 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LLO_2562 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LLO_1479 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LLO_2708 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LLO_3451 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LLO_0339 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LLO_4006 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LLO_r0004 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0007 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0012 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0001 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0002 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0011 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0005 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0008 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0003 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0010 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0009 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0006 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:llo00970]
D LLO_t0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LLO_t0042 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LLO_t0016 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LLO_t0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LLO_t0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LLO_t0021 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LLO_t0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LLO_t0040 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LLO_t0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LLO_t0027 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LLO_t0046 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LLO_t0019 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LLO_t0039 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LLO_t0022 tRNA-His K14226 tRNA-His; tRNA His
D LLO_t0003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LLO_t0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LLO_t0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LLO_t0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LLO_t0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LLO_t0043 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LLO_t0032 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LLO_t0033 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LLO_t0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D LLO_t0002 tRNA-Met K14230 tRNA-Met; tRNA Met
D LLO_t0038 tRNA-Met K14230 tRNA-Met; tRNA Met
D LLO_t0030 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LLO_t0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LLO_t0014 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LLO_t0036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LLO_t0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LLO_t0009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LLO_t0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LLO_t0015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LLO_t0010 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LLO_t0004 tRNA-Val K14237 tRNA-Val; tRNA Val
D LLO_t0024 tRNA-Val K14237 tRNA-Val; tRNA Val
D LLO_t0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D LLO_1236 gltX; Glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LLO_2296 gatA; Glutamyl-tRNA(Gln) amidotransferase (subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LLO_2297 gatB; Glutamyl-tRNA(Gln) amidotransferase (subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LLO_2295 putative glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LLO_1175 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LLO_1119 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LLO_1688 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LLO_0596 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LLO_1057 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LLO_1058 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LLO_0337 thrS; Threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LLO_2683 serS; putative Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LLO_1176 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LLO_0196 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LLO_0629 fmt; putative methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LLO_0818 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LLO_2335 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LLO_1959 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LLO_1131 lysS; putative lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LLO_2515 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LLO_0803 proS; Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LLO_1532 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LLO_0341 pheS; Phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LLO_0342 pheT; Phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LLO_2629 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LLO_1775 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:llo03060]
D LLO_0506 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D LLO_0473 secE; Preprotein translocase secE subunit K03073 secE; preprotein translocase subunit SecE
D LLO_0276 secG; Protein-export membrane protein secG (Preprotein translocase subunit) K03075 secG; preprotein translocase subunit SecG
D LLO_0932 secD; putative protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D LLO_0933 secF; putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LLO_0931 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D LLO_3448 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LLO_1739 secA; Preprotein translocase, secretion protein SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LLO_0576 secB; putative protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LLO_2843 ffh; putative signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LLO_mr0002 SRP_bact K01983 ffs; SRP RNA
D LLO_0373 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor
D LLO_0142 tatA; putative TatA protein(twin arginine translocation) K03116 tatA; sec-independent protein translocase protein TatA
D LLO_0141 tatB; putative TatB protein (twin arginine translocation) K03117 tatB; sec-independent protein translocase protein TatB
D LLO_0124 tatC; putative Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D LLO_1277 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LLO_1958 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:llo04122]
D LLO_2308 IscS; putative similar cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LLO_1477 trmU; putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LLO_p0008 putative molybdopterin converting factor 2 (subunit 1) K03636 moaD; sulfur-carrier protein
D LLO_2916 ThiF/MoeB/HesA family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D LLO_0929 ThiF family protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D LLO_p0009 putative molybdenum cofactor synthesis protein 3 K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D LLO_0922 thiS; putative thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:llo03018]
D LLO_0187 nudH; nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LLO_0586 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D LLO_2520 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LLO_0297 pnp; Polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LLO_1328 rhlE; putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LLO_3325 lidP; putative exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LLO_2818 deaD; putative ATP-dependent RNA helicase deaD (cold-shock DEAD-box protein A) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LLO_0889 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LLO_0083 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LLO_2505 dnaK; Chaperone protein DnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D LLO_0617 htpB; 60 kDa chaperonin (Protein Cpn60)(groEL protein)(Heat shock protein B). K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LLO_0016 hfq; protein Hfq K03666 hfq; host factor-I protein
D LLO_0460 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LLO_1548 pcnB; Poly(A) polymerase (PAP) (Plasmid copy number protein) K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:llo03030]
D LLO_1472 dnaQ; putative DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_1860 putative excinuclease abc, subunit c K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_p0061 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_1335 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LLO_0307 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LLO_1488 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LLO_2337 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LLO_2636 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LLO_0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LLO_0835 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LLO_2857 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LLO_0514 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D LLO_1471 rnhA; putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LLO_1463 rnhB; putative ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LLO_3316 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LLO_1933 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:llo03410]
D LLO_0194 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LLO_1705 putative Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LLO_0845 mutY; putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LLO_0890 putative methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D LLO_0415 mutM; putative formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LLO_0665 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LLO_2478 tag; putative 3-methyladenine-DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LLO_2454 putative C-terminal part of DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LLO_2564 xthA; putative exodeoxyribonuclease III XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LLO_2565 exoA; putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LLO_3316 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LLO_1744 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LLO_1933 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:llo03420]
D LLO_1943 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LLO_0551 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D LLO_3347 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D LLO_2652 uvrC; putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D LLO_1055 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LLO_3316 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LLO_1933 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LLO_1859 putative DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:llo03430]
D LLO_1108 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LLO_0355 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D LLO_1686 mutH; putative DNA mismatch repair protein mutH K03573 mutH; DNA mismatch repair protein MutH
D LLO_1055 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LLO_2035 xseA; Exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LLO_0567 xseB; putative exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LLO_1744 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LLO_0514 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D LLO_1335 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LLO_0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LLO_0307 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LLO_2337 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LLO_1488 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LLO_1472 dnaQ; putative DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_1860 putative excinuclease abc, subunit c K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_p0061 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_2636 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LLO_1933 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LLO_2557 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LLO_2937 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:llo03440]
D LLO_1744 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LLO_0514 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D LLO_0003 recF; RecF recombinational DNA repair ATPase K03629 recF; DNA replication and repair protein RecF
D LLO_1951 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D LLO_0305 recR; Recombination and repair protein recR K06187 recR; recombination protein RecR
D LLO_1117 recA; RecA protein K03553 recA; recombination protein RecA
D LLO_3316 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LLO_1156 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D LLO_1508 ruvB; putative Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LLO_1155 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LLO_0652 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LLO_2516 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LLO_1335 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LLO_0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LLO_0307 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LLO_2337 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LLO_1488 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LLO_1472 dnaQ; putative DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_1860 putative excinuclease abc, subunit c K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_p0061 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_2636 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LLO_0175 priA; Primosomal protein N' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D LLO_1004 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:llo02010]
D LLO_2583 potD; putative spermidine/putrescine-binding periplasmic protein precursor potD (SPBP) K11069 potD; spermidine/putrescine transport system substrate-binding protein
D LLO_2584 potC; putative spermidine/putrescine transport system permease protein potC. K11070 potC; spermidine/putrescine transport system permease protein
D LLO_2585 potB; putative spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D LLO_2586 potA; putative spermidine/putrescine transport system ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D LLO_2019 putative unknown protein K07323 mlaC; phospholipid transport system substrate-binding protein
D LLO_2089 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LLO_2020 yrbD; toluene transporter subunit: membrane component of ABC superfamily K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LLO_2091 putative ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LLO_2021 yrbE; toluene transporter subunit: membrane component of ABC superfamily K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LLO_2018 putative anti-anti-sigma factor K07122 mlaB; phospholipid transport system transporter-binding protein
D LLO_2090 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LLO_2022 yrbF; toluene transporter subunit: ATP-binding component of ABC superfamily K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LLO_0607 ugpB; putative glycerol-3-phosphate-binding periplasmic protein precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D LLO_2263 ugpA; glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D LLO_2262 ugpE; glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D LLO_2261 ugpC; glycerol-3-phosphate transporter subunit; ATP-binding component of ABC superfamily K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D LLO_1069 metQ; DL-methionine transporter subunit; periplasmic-binding component of ABC superfamily K02073 metQ; D-methionine transport system substrate-binding protein
D LLO_1070 metI; DL-methionine transporter subunit; membrane component protein of ABC superfamily K02072 metI; D-methionine transport system permease protein
D LLO_1071 metN; DL-methionine transporter subunit; ATP-binding component of ABC superfamily K02071 metN; D-methionine transport system ATP-binding protein
D LLO_2970 putative ABC transporter, permease component K09816 znuB; zinc transport system permease protein
D LLO_2971 putative ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D LLO_3152 ctrB; Capsule polysaccharide export inner-membrane protein ctrB K10107 kpsE; capsular polysaccharide transport system permease protein
D LLO_3151 ctrC; Capsule polysaccharide export inner-membrane protein ctrC K09688 kpsM; capsular polysaccharide transport system permease protein
D LLO_3150 ctrD; Capsule polysaccharide export ATP-binding protein ctrD (Capsular-polysaccharide-transporting ATPase) K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D LLO_0593 lolE; outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily K09808 lolC_E; lipoprotein-releasing system permease protein
D LLO_0594 lolD; outer membrane-specific lipoprotein transporter subunit; ATP-binding component of ABC superfamily K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LLO_1967 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D LLO_1968 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D LLO_1969 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D LLO_1970 ccmA; heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D LLO_0422 Predicted membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D LLO_0423 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D LLO_2027 lptB; putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LLO_0375 ftsX; putative cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D LLO_0374 ftsE; putative cell division ABC transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D LLO_1084 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LLO_2900 putative ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D LLO_1018 putative ABC transporter K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:llo02060]
D LLO_0186 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D LLO_2712 npr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) K08485 ptsO; phosphocarrier protein NPr
C 03070 Bacterial secretion system [PATH:llo03070]
D LLO_0806 tolC; putative outer membrane protein TolC K12340 tolC; outer membrane protein
D LLO_0129 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D LLO_1186 lspD; type II protein secretion LspD K02453 gspD; general secretion pathway protein D
D LLO_1449 lspF; type II secretory pathway protein LspF K02455 gspF; general secretion pathway protein F
D LLO_1448 lspG; type II secretory pathway protein LspG K02456 gspG; general secretion pathway protein G
D LLO_0380 Homologous to type II secretory pathway protein LspG K02456 gspG; general secretion pathway protein G
D LLO_1447 lspH; type II secretory pathway protein LspH K02457 gspH; general secretion pathway protein H
D LLO_1446 lspI; type II secretory pathway protein LspI K02458 gspI; general secretion pathway protein I
D LLO_1445 lspJ; type II secretory pathway protein LspJ K02459 gspJ; general secretion pathway protein J
D LLO_1444 lspK; type II secretory pathway protein LspK K02460 gspK; general secretion pathway protein K
D LLO_1274 putative general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D LLO_1273 putative general secretion pathway protein K02462 gspM; general secretion pathway protein M
D LLO_1185 lspE; type II protein secretion ATPase LspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LLO_0932 secD; putative protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D LLO_0933 secF; putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LLO_0473 secE; Preprotein translocase secE subunit K03073 secE; preprotein translocase subunit SecE
D LLO_0276 secG; Protein-export membrane protein secG (Preprotein translocase subunit) K03075 secG; preprotein translocase subunit SecG
D LLO_0506 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D LLO_0931 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D LLO_3448 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LLO_1739 secA; Preprotein translocase, secretion protein SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LLO_0373 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor
D LLO_0576 secB; putative protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LLO_2843 ffh; putative signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LLO_0142 tatA; putative TatA protein(twin arginine translocation) K03116 tatA; sec-independent protein translocase protein TatA
D LLO_0141 tatB; putative TatB protein (twin arginine translocation) K03117 tatB; sec-independent protein translocase protein TatB
D LLO_0124 tatC; putative Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D LLO_2887 traG; Conjugal transfer protein traG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:llo02020]
D LLO_1782 cpxA; Sensor histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D LLO_1781 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LLO_2348 htrA; periplasmic serine protease Do; heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D LLO_1256 mdtA; multidrug efflux system, subunit A K07799 mdtA; membrane fusion protein, multidrug efflux system
D LLO_1257 mdtB; multidrug efflux system, subunit B K07788 mdtB; multidrug efflux pump
D LLO_1258 mdtC; multidrug efflux system, subunit C K07789 mdtC; multidrug efflux pump
D LLO_1158 qseC; sensory histidine kinase in two-component regulatory system with QseB K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LLO_1159 qseB; DNA-binding response regulator in two-component regulatory system with QseC K07666 qseB; two-component system, OmpR family, response regulator QseB
D LLO_1128 fliA; sigma factor 28 K02405 fliA; RNA polymerase sigma factor FliA
D LLO_2471 putative osmosensitive K+ channel His-kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LLO_2468 kdpA; potassium translocating ATPase, subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D LLO_2469 kdpB; potassium translocating ATPase, subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D LLO_2470 kdpC; potassium translocating ATPase, subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D LLO_2400 putative sensory box sensor histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_3442 putative sensory box histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_2490 putative sensory histidine-kinase / response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_2814 putative conserved hypothetical proteins, hypothetical cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LLO_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LLO_2675 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_2917 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1611 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1639 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_0659 putative NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LLO_1147 sfcA; malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LLO_0429 sfcA; malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LLO_1061 uhpC; membrane protein regulates uhpT expression K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D LLO_1235 letS; Legionella transmission sensor LetS K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D LLO_2653 letA; Legionella transmission activator LetA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LLO_1813 Hypothetical protein, similar to carbon storage regulator K03563 csrA; carbon storage regulator
D LLO_2071 csrA; global regulator CsrA K03563 csrA; carbon storage regulator
D LLO_2874 csrA; global regulator K03563 csrA; carbon storage regulator
D LLO_1850 csrA; pleiotropic regulatory protein for carbon source metabolism (modular protein) K03563 csrA; carbon storage regulator
D LLO_1421 putative fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D LLO_2246 glnD; putative PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D LLO_1111 putative glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1450 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_0678 dctA; C4-dicarboxylic acid, orotate and citrate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D LLO_2709 rpoN; RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
D LLO_1233 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D LLO_3299 putative methyltransferase involved in chemotaxis (CheR domain) K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LLO_3298 putative chemotaxis signal transduction protein (cheW domain) K03408 cheW; purine-binding chemotaxis protein CheW
D LLO_3300 putative chemotaxis signal transduction protein (cheW domain) K03408 cheW; purine-binding chemotaxis protein CheW
D LLO_3302 putative chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LLO_3303 cheB; fused chemotaxis regulator; protein-glutamat K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LLO_2013 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D LLO_2320 fleS; putative sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D LLO_2319 fleR; putative two-component response regulator K10943 flrC; two-component system, response regulator FlrC
D LLO_1536 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_2387 putative cAMP/cGMP binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_0261 cNMP_binding protein, similar to eukaryotic cGMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_3395 putative cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_3142 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LLO_0347 petA; putative ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LLO_0348 petB; putative ubiquinol--cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LLO_0349 petC; putative ubiquinol-cytochrome c oxydoreductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LLO_2593 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LLO_2120 qxtA; putative cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LLO_2594 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LLO_2119 qxtB; putative cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LLO_0806 tolC; putative outer membrane protein TolC K12340 tolC; outer membrane protein
D LLO_0129 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D LLO_3149 bexD; Capsule polysaccharide export protein bexD precursor K01991 wza; polysaccharide biosynthesis/export protein
D LLO_0217 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D LLO_0850 Homologous to negative regulator of flagellin synthesis FlgM (Anti-sigma-28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D LLO_0347 petA; putative ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:llo02024]
D LLO_0016 hfq; protein Hfq K03666 hfq; host factor-I protein
D LLO_2028 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LLO_2721 proA; zinc metalloproteinase precursor K01399 lasB; pseudolysin [EC:3.4.24.26]
D LLO_2670 putative thermolysin metallopeptidase K01399 lasB; pseudolysin [EC:3.4.24.26]
D LLO_1327 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LLO_2507 putative 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LLO_1158 qseC; sensory histidine kinase in two-component regulatory system with QseB K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LLO_1159 qseB; DNA-binding response regulator in two-component regulatory system with QseC K07666 qseB; two-component system, OmpR family, response regulator QseB
D LLO_2994 gadB; glutamate decarboxylase B, PLP-dependent K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D LLO_1699 putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D LLO_2844 putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D LLO_1231 putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D LLO_2875 virB; LvhB11 K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D LLO_2877 putative conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D LLO_2878 trbD; Conjugal transfer protein trbD K20529 trbD; type IV secretion system protein TrbD
D LLO_2879 trbE; Conjugal transfer protein trbE precursor K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D LLO_2884 trbJ; Conjugal transfer protein trbJ precursor K20266 trbJ; type IV secretion system protein TrbJ
D LLO_2886 trbL; putative conjugal transfer protein trbL K07344 trbL; type IV secretion system protein TrbL
D LLO_2880 trbF; Conjugal transfer protein trbF K20531 trbF; type IV secretion system protein TrbF
D LLO_2881 trbG; Conjugal transfer protein trbG precursor K20532 trbG; type IV secretion system protein TrbG
D LLO_2882 putative conjugal transfer TrbH protein K20267 trbH; type IV secretion system protein TrbH
D LLO_2883 trbI; Conjugal transfer protein trbI K20533 trbI; type IV secretion system protein TrbI
D LLO_2606 putative acyl CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_1522 lidS; putative acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_1536 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_2387 putative cAMP/cGMP binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_0261 cNMP_binding protein, similar to eukaryotic cGMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_3395 putative cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_0711 putative Fe2+/Zn2+ uptake regulation proteins K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D LLO_1037 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LLO_2364 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_2411 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_0441 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_3190 oprM; outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_1932 hbpA; bacterial extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LLO_1931 putative ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LLO_1930 putative ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LLO_0764 yliA; putative peptide transport fused subunits of ABC superfamily: ATP-binding components K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LLO_3448 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LLO_0156 putative serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-]
D LLO_2500 putative serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D LLO_0473 secE; Preprotein translocase secE subunit K03073 secE; preprotein translocase subunit SecE
D LLO_0276 secG; Protein-export membrane protein secG (Preprotein translocase subunit) K03075 secG; preprotein translocase subunit SecG
D LLO_0506 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D LLO_0931 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D LLO_1739 secA; Preprotein translocase, secretion protein SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LLO_0373 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor
D LLO_0576 secB; putative protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LLO_2843 ffh; putative signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:llo02030]
D LLO_3302 putative chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LLO_3298 putative chemotaxis signal transduction protein (cheW domain) K03408 cheW; purine-binding chemotaxis protein CheW
D LLO_3300 putative chemotaxis signal transduction protein (cheW domain) K03408 cheW; purine-binding chemotaxis protein CheW
D LLO_3303 cheB; fused chemotaxis regulator; protein-glutamat K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LLO_3299 putative methyltransferase involved in chemotaxis (CheR domain) K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
C 02040 Flagellar assembly [PATH:llo02040]
D LLO_1317 flgD; Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D LLO_0850 Homologous to negative regulator of flagellin synthesis FlgM (Anti-sigma-28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
D LLO_2858 rpoD; RNA polymerase sigma factor rpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor
D LLO_2013 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D LLO_2709 rpoN; RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
D LLO_2319 fleR; putative two-component response regulator K10943 flrC; two-component system, response regulator FlrC
D LLO_1128 fliA; sigma factor 28 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D LLO_2520 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis [PATH:llo05134]
D LLO_2649 enhC; enhanced entry protein EnhC K15474 enhC; enhanced entry protein EnhC
D LLO_0617 htpB; 60 kDa chaperonin (Protein Cpn60)(groEL protein)(Heat shock protein B). K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LLO_2824 vipA; substrate of the Dot/Icm secretion system K15476 vipA; VPS inhibitor protein A
D LLO_3207 putative patatin-like phospholipase K15477 vipD; VPS inhibitor protein D
D LLO_1971 vipE; conserved protein of unknown function K15478 vipE; VPS inhibitor protein E
D LLO_1397 ralF; RalF protein, translocated into host cells by the Dot/Icm system K15479 ralF; guanine nucleotide exchange protein RalF
D LLO_2329 Hypothetical protein, contains eukaryotic Ras-family GTPase and Miro-like domains K07874 RAB1A; Ras-related protein Rab-1A
D LLO_3288 putative Ras family GTPase K07874 RAB1A; Ras-related protein Rab-1A
D LLO_1954 Coiled coil protein, some similarities with LidA K15481 lidA; effector protein LidA
D LLO_3098 sidC; SidC protein K15482 sidC; effector protein SidC
D LLO_0664 sdhA-2; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LLO_0395 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LLO_1682 putative serine/threonine-protein kinase K15486 legK1; serine/threonine-protein kinase LegK1 [EC:2.7.1.-]
D LLO_1721 hypothetical protein K15490 lgt1_2_3; glucosyltransferase Lgt1/2/3
D LLO_1578 hypothetical protein K15490 lgt1_2_3; glucosyltransferase Lgt1/2/3
D LLO_2525 hypothetical protein K15491 sidI; effector protein SidI
D LLO_1276 lepA; GTP-binding membrane protein K03596 lepA; GTP-binding protein LepA
D LLO_0796 putative substrate of the Dot/Icm secretion system, LepB-like K15492 K15492; effector protein B
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:llo01501]
D LLO_2063 putative AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LLO_1023 putative N-acetyl-beta-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LLO_0330 nagZ; beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LLO_2462 putative glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LLO_1199 putative transcriptional regulators K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LLO_3101 putative beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LLO_0546 putative HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_0820 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_2799 putative efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_0819 putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LLO_0547 putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LLO_2800 putative integral membrane protein, AcrB/AcrD/AcrF family K18138 acrB; multidrug efflux pump
D LLO_2364 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_2411 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_0441 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_3190 oprM; outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_0806 tolC; putative outer membrane protein TolC K12340 tolC; outer membrane protein
D LLO_0129 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D LLO_0872 mrcA; putative peptidoglycan synthetase; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LLO_1465 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LLO_0857 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LLO_1201 putative class-D beta-lactamase K22352 blaOXA-29; beta-lactamase class D OXA-29 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:llo01502]
D LLO_2675 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_2917 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1611 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1639 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_2754 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LLO_0836 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D LLO_2162 putative alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D LLO_2760 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LLO_2759 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LLO_2051 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:llo01503]
D LLO_0052 putative Rcp protein, confers resistance to cationic antimicrobial peptides and promotes intracellular infection K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D LLO_2242 putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LLO_2721 proA; zinc metalloproteinase precursor K01399 lasB; pseudolysin [EC:3.4.24.26]
D LLO_2670 putative thermolysin metallopeptidase K01399 lasB; pseudolysin [EC:3.4.24.26]
D LLO_1782 cpxA; Sensor histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D LLO_1781 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LLO_0354 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LLO_2348 htrA; periplasmic serine protease Do; heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D LLO_3286 dsbA; thiol:disulfide interchange protein precursor DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LLO_0546 putative HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_0820 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_2799 putative efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_0819 putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LLO_0547 putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LLO_2800 putative integral membrane protein, AcrB/AcrD/AcrF family K18138 acrB; multidrug efflux pump
D LLO_0806 tolC; putative outer membrane protein TolC K12340 tolC; outer membrane protein
D LLO_0129 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D LLO_2684 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:llo01000]
C 01001 Protein kinases [BR:llo01001]
D LLO_1682 putative serine/threonine-protein kinase K15486 legK1; serine/threonine-protein kinase LegK1 [EC:2.7.1.-]
D LLO_1782 cpxA; Sensor histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D LLO_1158 qseC; sensory histidine kinase in two-component regulatory system with QseB K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LLO_2471 putative osmosensitive K+ channel His-kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LLO_2400 putative sensory box sensor histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_3442 putative sensory box histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_2490 putative sensory histidine-kinase / response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_1235 letS; Legionella transmission sensor LetS K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D LLO_0752 putative signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D LLO_3302 putative chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LLO_2320 fleS; putative sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:llo01009]
D LLO_1088 putative adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LLO_2501 sahH; Adenosylhomocysteinase (S-adenosyl-L-homocysteinehydrolase) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LLO_1455 htpG; Class III heat-shock protein HtpG(molecular chaperone) K04079 HSP90A; molecular chaperone HtpG
D LLO_0727 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:llo01002]
D LLO_1958 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LLO_1587 pilD; Type 4 prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LLO_1714 putative plasminogen activator protein K08566 pla; plasminogen activator [EC:3.4.23.48]
D LLO_2452 vhtD; hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D LLO_2251 guaA; putative GMP synthetase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LLO_2900 putative ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D LLO_3278 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LLO_0211 glmS; Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LLO_1878 putative asparagine synthase, glutamine-hydrolyzing protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LLO_3211 putative asparagine synthetase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LLO_1815 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D LLO_1897 Hypothetical Protein similar to CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D LLO_0963 hypothetical protein K07052 K07052; CAAX protease family protein
D LLO_0259 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LLO_1598 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LLO_1982 putative zinc-dependent metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D LLO_3259 prlC; Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D LLO_0045 putative zinc metalloproteinase precursor K08604 hap; vibriolysin [EC:3.4.24.25]
D LLO_2721 proA; zinc metalloproteinase precursor K01399 lasB; pseudolysin [EC:3.4.24.26]
D LLO_2670 putative thermolysin metallopeptidase K01399 lasB; pseudolysin [EC:3.4.24.26]
D LLO_2749 pepO; metallopeptidase PepO, peptidase, M13 family K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D LLO_2675 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_2917 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1611 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1639 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_0372 putative zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D LLO_0371 putative zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D LLO_2635 pepA; putative leucine aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LLO_2639 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LLO_1708 putative carboxypeptidase G2 and to acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D LLO_0839 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LLO_2245 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LLO_3338 pepP; putative proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D LLO_0255 putative aminopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D LLO_1017 putative thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D LLO_0731 ftsH; protease, ATP-dependent zinc-metallo K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LLO_0272 ftsH; Cell division protease ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LLO_2695 htpX; putative protease heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LLO_0554 putative heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LLO_1036 putative protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D LLO_0562 putative membrane-associated metalloprotease proteins K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D LLO_2689 ecfE; putative membrane-associated Zn-dependent protease EcfE K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D LLO_1264 hypothetical protein K09933 mtfA; MtfA peptidase
D LLO_2348 htrA; periplasmic serine protease Do; heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D LLO_0156 putative serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-]
D LLO_2500 putative serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D LLO_2221 putative subtilisin-like serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D LLO_1893 Hypothetical Protein similar to Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D LLO_1766 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LLO_1564 putative D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LLO_2621 putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LLO_1283 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LLO_1285 lon; putative ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LLO_3110 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LLO_2659 Peptidase S24 family protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LLO_1863 putative SOS (Error prone) mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LLO_1987 putative UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LLO_p0066 Peptidase S24 family protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LLO_1277 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LLO_1054 putative proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LLO_2694 ctpA; carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D LLO_2311 sppA; signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D LLO_2011 sohB; putative inner membrane peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D LLO_2536 putative cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D LLO_0747 putative muramoyl-tetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LLO_0459 putative LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LLO_2569 hslV; Peptidase component of the HslUV protease (Heat shock protein) K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D LLO_2535 iaaA; isoaspartyl dipeptidase with L-asparaginase activity K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LLO_0410 putative Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LLO_1442 pmbA; Hypothetical protein of unknown function K03592 pmbA; PmbA protein
D LLO_1944 tldD; TldD protein K03568 tldD; TldD protein
D LLO_1605 putative membrane protein K06894 yfhM; alpha-2-macroglobulin
D LLO_2701 hflC; membrane protease subunit HflC K04087 hflC; modulator of FtsH protease HflC
D LLO_2702 hflK; protease subunit HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:llo01003]
D LLO_0772 putative glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D LLO_2737 putative integral membrane protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D LLO_1606 pbpC; penicillin binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LLO_0872 mrcA; putative peptidoglycan synthetase; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LLO_0412 putative glycosyltransferase, family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:llo01005]
D LLO_2684 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LLO_1461 lpxB; putative lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LLO_2750 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LLO_2686 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LLO_3315 lpxD; putative UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LLO_1524 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LLO_1085 lpxK; putative tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LLO_0524 waaM; putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LLO_0556 kdtA; 3-Deoxy-D-manno-oct-2-ulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LLO_0052 putative Rcp protein, confers resistance to cationic antimicrobial peptides and promotes intracellular infection K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D LLO_2242 putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LLO_1040 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LLO_3306 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LLO_2024 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LLO_2023 kdsD; putative arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LLO_2039 putative O-antigen biosynthesis protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D LLO_0359 putative glycosyltransferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D LLO_3434 yraO; DnaA initiator-associating factor for replication initiation K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LLO_3050 yfdH; bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D LLO_0223 putative glycosyl transferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:llo01011]
D LLO_2016 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LLO_2755 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LLO_2756 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LLO_2758 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LLO_0858 murE; putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LLO_2162 putative alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D LLO_2754 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LLO_0836 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D LLO_0572 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LLO_0747 putative muramoyl-tetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LLO_0459 putative LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LLO_2759 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LLO_2051 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LLO_2640 mviN; Virulence factor mviN homolog K03980 murJ; putative peptidoglycan lipid II flippase
D LLO_0994 Virulence factor mviN homolog K03980 murJ; putative peptidoglycan lipid II flippase
D LLO_0872 mrcA; putative peptidoglycan synthetase; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LLO_1606 pbpC; penicillin binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LLO_1465 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LLO_0857 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LLO_1766 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LLO_1564 putative D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LLO_2621 putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LLO_1815 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D LLO_2675 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_2917 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1611 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1639 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_0609 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LLO_1346 mltA; putative membrane-bound lytic murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D LLO_3123 putative membrane-bound lytic murein transglycosylase (MltA) family protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D LLO_0136 mltB; lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D LLO_1275 mltB; membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D LLO_1161 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D LLO_1486 yceG; putative conserved membrane associated protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D LLO_1765 putative rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LLO_1645 putative rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LLO_0354 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:llo01004]
D LLO_1482 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LLO_1481 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LLO_0544 putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LLO_2604 putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LLO_2609 fabH; 3-oxoacyl-(acyl carrier protein) synthase III FabH K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LLO_0523 putative 3-oxoacyl-[acyl-carrier-protein] synthase beta chain K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LLO_0522 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_1485 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP synthase II) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_3313 fabF-2; putative 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LLO_1483 fabG; 3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LLO_2608 fabG; 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LLO_2685 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein]dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LLO_1044 fabI; putative Enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LLO_0314 fabI; enoyl-[acyl-carrier-protein] reductase, NADH-dependent K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LLO_0519 putative 3-oxoacyl-[acyl-carrier protein] reductase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D LLO_0213 yciA; putative hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D LLO_2291 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LLO_0417 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LLO_2117 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LLO_1421 putative fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D LLO_3273 acsB; putative acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LLO_1072 acsA; acetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D LLO_2606 putative acyl CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_1522 lidS; putative acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_2965 putative acetyltransferase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D LLO_1480 plsX; Fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LLO_2853 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LLO_0414 plsC; 1-acyl-sn-glycerol-3-phosphate acetyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:llo01008]
D LLO_3253 protein containing FG-GAP repeats (motif found in alpha integrins) K21162 sgcE4; enediyne biosynthesis protein E4
D LLO_3361 putative amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:llo01006]
D LLO_0566 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LLO_2666 ispB; putative octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LLO_3345 ispB-2; putative octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LLO_2691 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LLO_0356 miaA; putative tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LLO_1788 ubiA; putative 4-hydroxybenzoate-octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LLO_2813 putative Polyprenyltransferase (cytochrome oxidase assembly factor) K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:llo01007]
D LLO_1236 gltX; Glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LLO_1175 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LLO_2629 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LLO_1775 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LLO_1176 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LLO_2515 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LLO_0196 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LLO_1959 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LLO_0818 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LLO_2335 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LLO_1131 lysS; putative lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LLO_1688 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LLO_0596 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LLO_1532 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LLO_1057 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LLO_1058 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LLO_2683 serS; putative Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LLO_0803 proS; Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LLO_0337 thrS; Threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LLO_1119 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LLO_0341 pheS; Phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LLO_0342 pheT; Phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LLO_3348 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1324 aspB; putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LLO_1746 yfdZ; putative aminotransferase, PLP-dependent K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D LLO_1342 hisC-2; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_1302 hisC; Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase) K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LLO_0808 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LLO_1731 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LLO_3178 putative aminotransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LLO_0059 argD; putative ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LLO_1733 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LLO_1552 hemL; putative glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LLO_1801 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LLO_1795 putative polysaccharide biosynthesis protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:llo00194]
D LLO_3418 atpC; putative H+-transporting ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LLO_3419 atpD; putative H+-transporting ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LLO_3420 atpG; putative H+-transporting ATP synthase chain gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LLO_3421 atpA; F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LLO_3422 atpH; F1 sector of membrane-bound ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LLO_3423 atpF; putative H+-transporting ATP synthase chain b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LLO_3424 atpE; putative H+-transporting ATP synthase chain c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LLO_3425 atpB; putative H+-transporting ATP synthase chain a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LLO_3426 atpI; putative ATP synthase subunit i K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:llo03000]
D LLO_2588 putative Ada protein (O6-methylguanine-DNA methyltransferase) K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LLO_2772 putative transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D LLO_2696 putative transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D LLO_p0054 putative transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D LLO_0685 asnC; DNA-binding transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D LLO_2410 ybaO; putative DNA-binding transcriptional regulator with homology to Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LLO_2523 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LLO_2139 putative transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D LLO_2182 putative transcriptional regulator, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D LLO_0531 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LLO_0711 putative Fe2+/Zn2+ uptake regulation proteins K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D LLO_1536 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_2387 putative cAMP/cGMP binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_0261 cNMP_binding protein, similar to eukaryotic cGMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_3395 putative cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LLO_1422 putative transcriptional regulator, crp family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D LLO_2992 nsrR; DNA-binding transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D LLO_1416 putative transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D LLO_0970 ydcN; putative DNA-binding transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D LLO_1199 putative transcriptional regulators K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LLO_2070 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LLO_1460 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_2305 putative DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_0406 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_2013 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D LLO_0147 putative transcriptional regulator (XRE-family) K07727 K07727; putative transcriptional regulator
D LLO_1700 putA; putative bifunctional PutA protein (proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LLO_1232 bolA; regulator of penicillin binding proteins and beta lactamase transcription (morphogene) K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D LLO_0157 parB; putative chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LLO_2620 parB; putative partition protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LLO_2281 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D LLO_2767 putative phage shock protein C, PspC K03973 pspC; phage shock protein C
D LLO_2740 putative conserved hypothetical protein K07735 algH; putative transcriptional regulator
D LLO_0557 dksA; putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D LLO_0825 nrdR; transcriptional repressor of nrd genes K07738 nrdR; transcriptional repressor NrdR
D LLO_0854 mraZ; conserved protein of unknown function K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:llo03021]
D LLO_1859 putative DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D LLO_0510 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LLO_0479 rpoB; RNA polymerase B-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LLO_0480 rpoC; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LLO_0907 rpoZ; RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LLO_2858 rpoD; RNA polymerase sigma factor rpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor
D LLO_1151 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D LLO_0376 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D LLO_2709 rpoN; RNA polymerase sigma-54 factor (sigma-L) K03092 rpoN; RNA polymerase sigma-54 factor
D LLO_1128 fliA; sigma factor 28 K02405 fliA; RNA polymerase sigma factor FliA
D LLO_3385 hepA; RNA polymerase-associated protein HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D LLO_0292 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D LLO_0826 nusB; putative N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D LLO_0474 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LLO_0350 sspA; putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D LLO_0351 sspB; putative stringent starvation protein B K03600 sspB; stringent starvation protein B
D LLO_0557 dksA; putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D LLO_3087 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D LLO_0088 greB; transcription elongation factor K04760 greB; transcription elongation factor GreB
D LLO_0083 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:llo03019]
D LLO_0586 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D LLO_1279 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LLO_3325 lidP; putative exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LLO_0311 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LLO_1328 rhlE; putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LLO_2818 deaD; putative ATP-dependent RNA helicase deaD (cold-shock DEAD-box protein A) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LLO_0889 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LLO_2520 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LLO_0297 pnp; Polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LLO_0083 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LLO_2505 dnaK; Chaperone protein DnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D LLO_0617 htpB; 60 kDa chaperonin (Protein Cpn60)(groEL protein)(Heat shock protein B). K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LLO_0016 hfq; protein Hfq K03666 hfq; host factor-I protein
D LLO_0460 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LLO_1548 pcnB; Poly(A) polymerase (PAP) (Plasmid copy number protein) K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D LLO_0187 nudH; nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LLO_1813 Hypothetical protein, similar to carbon storage regulator K03563 csrA; carbon storage regulator
D LLO_2071 csrA; global regulator CsrA K03563 csrA; carbon storage regulator
D LLO_2874 csrA; global regulator K03563 csrA; carbon storage regulator
D LLO_1850 csrA; pleiotropic regulatory protein for carbon source metabolism (modular protein) K03563 csrA; carbon storage regulator
D LLO_0029 hrpB; Helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:llo03011]
D LLO_1798 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LLO_1720 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LLO_0492 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LLO_0509 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LLO_0503 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LLO_1812 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LLO_0482 rpsL; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LLO_0500 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LLO_0346 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LLO_0485 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LLO_0508 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LLO_0481 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LLO_0507 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LLO_0499 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LLO_0296 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LLO_2842 rpsP; putative 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LLO_0495 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LLO_1811 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LLO_0490 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LLO_2642 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LLO_2855 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LLO_0476 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LLO_0489 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LLO_0486 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LLO_0487 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LLO_0498 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LLO_0501 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LLO_1809 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LLO_0477 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LLO_0475 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LLO_0478 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LLO_0345 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LLO_0496 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LLO_0505 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LLO_0493 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LLO_0511 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LLO_0502 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LLO_2839 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LLO_0340 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LLO_2662 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LLO_0491 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LLO_0488 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LLO_0497 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LLO_2661 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LLO_2707 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LLO_0494 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LLO_0504 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LLO_2562 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LLO_1479 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LLO_2708 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LLO_3451 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LLO_0339 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LLO_4006 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LLO_2663 rplY; 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D LLO_r0003 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0010 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0009 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0006 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0004 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0007 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0012 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0001 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0002 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0011 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0005 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0008 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:llo03009]
D LLO_1279 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LLO_0311 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LLO_1952 era; membrane-associated, 16S rRNA-binding GTPase K03595 era; GTPase
D LLO_2660 obgL; putative essential GTPase K03979 obgE; GTPase [EC:3.6.5.-]
D LLO_0557 dksA; putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D LLO_0292 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D LLO_0826 nusB; putative N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D LLO_0474 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LLO_0126 ksgA; putative dimethyladenosine transferase (16S rRNA dimethylase) K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D LLO_0628 rsmB; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D LLO_0370 yhhF; putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D LLO_0081 rsmE; Ribosomal RNA small subunit methyltransferase E (16S rRNA m3U1498 methyltransferase) K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D LLO_0159 gidB; putative glucose inhibited division protein B GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LLO_0855 mraW; S-adenosyl-dependent methyltransferase activity on membrane-located substrates K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D LLO_3437 yraL; putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LLO_1059 putative conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D LLO_3324 rlmB; putative enzyme K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D LLO_0271 rrmJ; Ribosomal RNA large subunit methyltransferase (Cell division protein FtsJ) K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D LLO_1466 putative conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D LLO_1296 putative unknown protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D LLO_1164 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D LLO_0048 ycbY; putative conserved AdoMet-dependent methyltransferase with RNA interaction domain K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D LLO_1581 putative methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D LLO_1529 yfgB; putative Fe-S containing enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D LLO_1757 rumA; 23S rRNA (Uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D LLO_1772 rluB; putative ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase) K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LLO_0588 rluC; Ribosomal large subunit pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D LLO_2346 rluD; Ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase) K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LLO_2045 ymfC; 23S rRNA pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D LLO_1758 rimI; GCN5-related N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D LLO_2978 putative acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D LLO_2811 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D LLO_2841 rimM; putative 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D LLO_0613 putative conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D LLO_p0010 putative conserved hypothetical proteins K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D LLO_2726 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D LLO_0580 prmB; N5-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D LLO_1249 putative conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D LLO_0586 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D LLO_2739 yqgF; Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D LLO_3238 dbpA; putative ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D LLO_2818 deaD; putative ATP-dependent RNA helicase deaD (cold-shock DEAD-box protein A) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LLO_0309 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LLO_1535 der; GTPase involved in ribosome synthesis and maintenance K03977 engA; GTPase
D LLO_0017 hflX; putative GTPase K03665 hflX; GTPase
D LLO_3377 putative translation initiation protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LLO_0908 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LLO_0294 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D LLO_0291 putative conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D LLO_0101 ybcJ; putative RNA-binding protein K14761 rlbA; ribosome-associated protein
D LLO_p0036 ybcJ; putative RNA-binding protein K14761 rlbA; ribosome-associated protein
D LLO_1467 putative conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D LLO_1779 ybeY; putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D LLO_0270 yhbY; putative RNA-binding protein K07574 yhbY; RNA-binding protein
D LLO_0047 putative conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D LLO_2710 yhbH; ribosome-associated, sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D LLO_2665 ychF; putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D LLO_1478 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:llo03016]
D LLO_0201 putative ribonuclease T2 family K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D LLO_0310 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D LLO_3217 cca; multifunctional tRNA nucleotidy K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D LLO_0715 putative unknown proteins K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D LLO_0716 hypothetical protein K24956 ZBTB8OS; protein archease
D LLO_1236 gltX; Glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LLO_0803 proS; Prolyl-tRNA synthetase (Proline--tRNA ligase)(ProRS)(Global RNA synthesis factor) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LLO_1959 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LLO_2335 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LLO_0196 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LLO_1175 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LLO_2515 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LLO_1131 lysS; putative lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LLO_1688 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LLO_1119 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LLO_0596 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LLO_0337 thrS; Threonyl tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LLO_2683 serS; putative Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LLO_1176 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LLO_0818 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LLO_1532 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LLO_0341 pheS; Phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LLO_0342 pheT; Phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LLO_2629 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LLO_1775 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LLO_1053 dtd; D-tyr-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LLO_0299 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LLO_0438 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LLO_2706 yggH; tRNA (m7G46) methyltransferase, SAM-dependent K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LLO_1171 truA; tRNA-pseudouridine synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LLO_0295 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D LLO_0886 putative conserved hypothetical proteins K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D LLO_2308 IscS; putative similar cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LLO_3377 putative translation initiation protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LLO_0356 miaA; putative tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LLO_3447 trmE; GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LLO_0160 gidA; putative glucose-inhibited division protein A GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LLO_3450 rnpA; putative ribonuclease P protein component (RNase P) K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LLO_0063 rnsT; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D LLO_0904 rph; Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) K00989 rph; ribonuclease PH [EC:2.7.7.56]
D LLO_0436 putative 2',5' RNA ligase family protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D LLO_0810 yjjK; putative fused transporter subunits of ABC superfamily: ATP-binding components K06020 ettA; energy-dependent translational throttle protein EttA
D LLO_1057 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LLO_1058 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LLO_3388 Conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D LLO_2250 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D LLO_1740 yjbN; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D LLO_0170 putative tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D LLO_2345 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D LLO_2840 trmD; putative tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LLO_2307 yfhQ; putative methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D LLO_2365 yibK; putative rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LLO_1505 hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D LLO_1477 trmU; putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LLO_0805 ydaO; putative C32 tRNA thiolase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D LLO_2310 sufA; Fe-S cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D LLO_1501 Hypothetical protein similar to glycine cleavage T protein K06980 ygfZ; tRNA-modifying protein YgfZ
D LLO_1526 miaE; tRNA-(ms(2)io(6)a)-hydrolase(tRNA hydroxylase) K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D LLO_1554 putative FAD dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D LLO_0913 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D LLO_0198 putative transcriptional regulator ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LLO_0174 putative unknown protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LLO_0725 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LLO_0515 putative GTP cyclohydrolase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LLO_0312 putative conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D LLO_0914 putative queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LLO_0331 tgt; putative queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LLO_2067 mesJ; cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LLO_1228 putative glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LLO_2854 gcp; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LLO_0353 yjeE; ATPase with strong ADP affinity K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LLO_3325 lidP; putative exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LLO_0297 pnp; Polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:llo03012]
D LLO_0293 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LLO_0338 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LLO_1280 yheS; putative fused transporter subunits of ABC superfamily: ATP-binding components K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D LLO_1719 tsf; Elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D LLO_0472 tufA-2; elongation factor Tu K02358 tuf; elongation factor Tu
D LLO_0484 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D LLO_0483 fusA; translation elongation factor G K02355 fusA; elongation factor G
D LLO_1912 fusA; protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D LLO_0559 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D LLO_1717 rrf; Ribosome recycling factor K02838 frr; ribosome recycling factor
D LLO_0558 hemK; putative methyltransferase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LLO_2664 pth; putative peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D LLO_2328 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LLO_0457 efp; putative elongation factor P K02356 efp; elongation factor P
D LLO_3066 poxA; lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D LLO_0458 yjeK; putative lysine aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D LLO_1245 putative conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D LLO_1130 prfB; putative peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D LLO_2477 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:llo03110]
D LLO_2041 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D LLO_2312 clpB; endopeptidase Clp ATP-binding chain B (ClpB) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D LLO_1284 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D LLO_2568 hslU; ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D LLO_1455 htpG; Class III heat-shock protein HtpG(molecular chaperone) K04079 HSP90A; molecular chaperone HtpG
D LLO_2505 dnaK; Chaperone protein DnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D LLO_0617 htpB; 60 kDa chaperonin (Protein Cpn60)(groEL protein)(Heat shock protein B). K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LLO_2504 dnaJ; chaperone protein DnaJ (heat shock protein) K03686 dnaJ; molecular chaperone DnaJ
D LLO_2081 cbpA; putative curved DNA-binding protein (sequence similarity to chaperone protein dnaJ) K05516 cbpA; curved DNA-binding protein
D LLO_0555 djlA; Dna-J like chaperone protein K05801 djlA; DnaJ like chaperone protein
D LLO_0244 yrfI; heat shock protein 33 K04083 hslO; molecular chaperone Hsp33
D LLO_2506 grpE; Heat-shock protein GrpE(HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D LLO_1571 putative heat shock protein K13993 HSP20; HSP20 family protein
D LLO_2974 putative small heat shock protein K13993 HSP20; HSP20 family protein
D LLO_2550 putative heat shock protein, Hsp20 family K13993 HSP20; HSP20 family protein
D LLO_0616 groES; 10 kDa chaperonin (Protein Cpn10) (groES protein) (Heat shock protein A) K04078 groES; chaperonin GroES
D LLO_2348 htrA; periplasmic serine protease Do; heat shock protein HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D LLO_0731 ftsH; protease, ATP-dependent zinc-metallo K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LLO_0272 ftsH; Cell division protease ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LLO_3425 atpB; putative H+-transporting ATP synthase chain a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LLO_0576 secB; putative protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LLO_1670 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D LLO_1722 spy; envelope stress induced periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy
D LLO_2442 hypA; Hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D LLO_2443 hypB; Hydrogenase expression/formation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D LLO_0156 putative serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-]
D LLO_2500 putative serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D LLO_0332 ppiB; Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D LLO_1288 putative peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D LLO_2064 mip; macrophage infectivity potentiator K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D LLO_0468 surA; putative peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D LLO_0082 trxA; putative thioredoxin K03671 TXN; thioredoxin
D LLO_1498 putative thioredoxin proteins K03671 TXN; thioredoxin
D LLO_0577 grx; putative glutaredoxin Grx K03676 grxC; glutaredoxin 3
D LLO_0061 grlA; glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D LLO_3286 dsbA; thiol:disulfide interchange protein precursor DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LLO_0329 putative disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D LLO_0615 lidC; putative thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D LLO_1964 ccmG; cytochrome C biogenesis protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:llo04131]
D LLO_1528 ndk; putative nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LLO_2329 Hypothetical protein, contains eukaryotic Ras-family GTPase and Miro-like domains K07874 RAB1A; Ras-related protein Rab-1A
D LLO_3288 putative Ras family GTPase K07874 RAB1A; Ras-related protein Rab-1A
D LLO_2717 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LLO_3262 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LLO_3264 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LLO_1455 htpG; Class III heat-shock protein HtpG(molecular chaperone) K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:llo04121]
C 03051 Proteasome [BR:llo03051]
D LLO_1455 htpG; Class III heat-shock protein HtpG(molecular chaperone) K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:llo03032]
D LLO_1471 rnhA; putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LLO_1286 hubB; putative DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D LLO_p0051 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D LLO_0343 himA; putative integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D LLO_0073 himD; putative integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D LLO_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LLO_0835 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LLO_2857 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LLO_0514 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D LLO_1335 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LLO_0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LLO_2636 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LLO_2337 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LLO_1488 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LLO_1472 dnaQ; putative DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_1860 putative excinuclease abc, subunit c K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_p0061 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_0307 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LLO_1463 rnhB; putative ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LLO_3316 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LLO_1933 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LLO_2557 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LLO_2937 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LLO_0268 hda; ATPase regulatory factor involved in DnaA inactivation K10763 hda; DnaA-homolog protein
D LLO_1802 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LLO_0004 gyrB; DNA gyrase, subunit B (type II topoisomerase) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LLO_3413 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LLO_0763 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LLO_0634 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:llo03036]
D LLO_1279 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LLO_2717 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LLO_1286 hubB; putative DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D LLO_p0051 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D LLO_0343 himA; putative integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D LLO_0073 himD; putative integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D LLO_2081 cbpA; putative curved DNA-binding protein (sequence similarity to chaperone protein dnaJ) K05516 cbpA; curved DNA-binding protein
D LLO_2082 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D LLO_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LLO_0091 putative conserved hypothetical protein K11940 hspQ; heat shock protein HspQ
D LLO_0618 putative DNA-binding ferritin-like protein (oxidative damage protectant) K04047 dps; starvation-inducible DNA-binding protein
D LLO_2563 putative ferritin, Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D LLO_1460 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_2305 putative DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_0406 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_0016 hfq; protein Hfq K03666 hfq; host factor-I protein
D LLO_2410 ybaO; putative DNA-binding transcriptional regulator with homology to Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LLO_2523 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LLO_2762 smc; putative chromosome partition protein smc K03529 smc; chromosome segregation protein
D LLO_1774 scpA; putative segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D LLO_1773 scpB; putative segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D LLO_2752 ftsA; ATP-binding cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LLO_2083 putative cell division protein ftsB homolog K05589 ftsB; cell division protein FtsB
D LLO_0374 ftsE; putative cell division ABC transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D LLO_0857 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LLO_2324 ftsK; putative cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LLO_0856 ftsL; cell division transmembrane protein FtsL K03586 ftsL; cell division protein FtsL
D LLO_2514 hypothetical protein K03591 ftsN; cell division protein FtsN
D LLO_2753 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D LLO_2757 ftsW; Cell division protein ftsW K03588 ftsW; cell division protein FtsW
D LLO_0375 ftsX; putative cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D LLO_2751 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LLO_2761 putative cell division protein K03528 zipA; cell division protein ZipA
D LLO_3340 zapA; Cell division protein ZapA K09888 zapA; cell division protein ZapA
D LLO_0388 putative predicted ATPase K06916 zapE; cell division protein ZapE
D LLO_0354 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LLO_0546 putative HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_0820 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_2799 putative efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_1523 putative cell division inhibitor MinC (septum placement) K03610 minC; septum site-determining protein MinC
D LLO_2253 minD; Septum site-determining protein (Cell division inhibitor) K03609 minD; septum site-determining protein MinD
D LLO_2254 minE; Septum formation topological specificity factor K03608 minE; cell division topological specificity factor
D LLO_2048 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D LLO_2047 mreC; Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D LLO_2046 mreD; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D LLO_1464 rodA; Rod shape-determining protein rodA K05837 rodA; rod shape determining protein RodA
D LLO_0158 parA; putative chromosome partitioning protein ParA family K03496 parA; chromosome partitioning protein
D LLO_p0001 putative chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D LLO_0157 parB; putative chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LLO_2620 parB; putative partition protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LLO_3413 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LLO_0763 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LLO_0160 gidA; putative glucose-inhibited division protein A GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LLO_0159 gidB; putative glucose inhibited division protein B GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LLO_1099 putative unknown protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LLO_3282 putative Fic protein family K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D LLO_3284 yihA; GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:llo03400]
D LLO_2002 putative deoxyribodipyrimidine photolyase phrB K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LLO_1705 putative Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LLO_0890 putative methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D LLO_0845 mutY; putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LLO_0194 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LLO_1859 putative DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D LLO_1738 mutT; Mutator protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LLO_3062 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP pyrophosphatase) K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LLO_2588 putative Ada protein (O6-methylguanine-DNA methyltransferase) K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LLO_2122 Deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D LLO_2454 putative C-terminal part of DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LLO_0665 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LLO_2478 tag; putative 3-methyladenine-DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LLO_0415 mutM; putative formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LLO_2564 xthA; putative exodeoxyribonuclease III XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LLO_2565 exoA; putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LLO_1744 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LLO_1933 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LLO_3316 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LLO_0551 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D LLO_3347 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D LLO_2652 uvrC; putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D LLO_1055 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LLO_0479 rpoB; RNA polymerase B-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LLO_0480 rpoC; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LLO_0510 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LLO_0907 rpoZ; RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LLO_1943 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LLO_1108 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LLO_0355 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D LLO_1686 mutH; putative DNA mismatch repair protein mutH K03573 mutH; DNA mismatch repair protein MutH
D LLO_2035 xseA; Exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LLO_0567 xseB; putative exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LLO_1335 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LLO_0002 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LLO_2636 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LLO_2337 putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LLO_1488 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LLO_1472 dnaQ; putative DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_1860 putative excinuclease abc, subunit c K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_p0061 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LLO_0307 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LLO_0514 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D LLO_2557 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LLO_2937 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LLO_1117 recA; RecA protein K03553 recA; recombination protein RecA
D LLO_1156 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D LLO_1508 ruvB; putative Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LLO_1155 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LLO_0175 priA; Primosomal protein N' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LLO_0568 radA; putative DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D LLO_0003 recF; RecF recombinational DNA repair ATPase K03629 recF; DNA replication and repair protein RecF
D LLO_0652 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LLO_2516 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LLO_1951 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D LLO_0305 recR; Recombination and repair protein recR K06187 recR; recombination protein RecR
D LLO_0251 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D LLO_1294 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D LLO_1001 yjgR; putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D LLO_1004 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D LLO_1802 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LLO_0004 gyrB; DNA gyrase, subunit B (type II topoisomerase) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LLO_0634 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LLO_1286 hubB; putative DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D LLO_p0051 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D LLO_1460 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_2305 putative DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_0406 fis; global DNA-binding transcriptional dual regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LLO_0343 himA; putative integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D LLO_0073 himD; putative integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D LLO_0889 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LLO_2658 dinP; putative DNA damage inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LLO_1861 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LLO_p0064 dinP; putative DNA damage inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LLO_1862 umuC; DNA polymerase V, subunit C K03502 umuC; DNA polymerase V
D LLO_1986 umuC; DNA polymerase V, subunit C K03502 umuC; DNA polymerase V
D LLO_p0065 umuC; DNA polymerase V, subunit C K03502 umuC; DNA polymerase V
D LLO_2659 Peptidase S24 family protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LLO_1863 putative SOS (Error prone) mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LLO_1987 putative UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LLO_p0066 Peptidase S24 family protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LLO_1118 recX; Regulatory protein RecX K03565 recX; regulatory protein
D LLO_0242 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D LLO_1227 yoaA; putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D LLO_0778 putative helicase, DEAD/DEAH box family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D LLO_1440 rir1; putative ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LLO_1439 rir2; putative ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:llo03029]
D LLO_0348 petB; putative ubiquinol--cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LLO_0293 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LLO_0338 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LLO_1719 tsf; Elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D LLO_0472 tufA-2; elongation factor Tu K02358 tuf; elongation factor Tu
D LLO_0484 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D LLO_0483 fusA; translation elongation factor G K02355 fusA; elongation factor G
D LLO_1912 fusA; protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D LLO_1952 era; membrane-associated, 16S rRNA-binding GTPase K03595 era; GTPase
D LLO_2629 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LLO_2335 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LLO_1688 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LLO_2515 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LLO_2296 gatA; Glutamyl-tRNA(Gln) amidotransferase (subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LLO_2297 gatB; Glutamyl-tRNA(Gln) amidotransferase (subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LLO_2295 putative glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LLO_2370 putative unknown proteins K23498 COXPD7; peptide chain release factor
D LLO_0514 ssb; Single-strand binding protein (SSB) (Helix-destabilizing protein) K03111 ssb; single-strand DNA-binding protein
D LLO_2688 yaeT; outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D LLO_2505 dnaK; Chaperone protein DnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D LLO_2506 grpE; Heat-shock protein GrpE(HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D LLO_0617 htpB; 60 kDa chaperonin (Protein Cpn60)(groEL protein)(Heat shock protein B). K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LLO_0616 groES; 10 kDa chaperonin (Protein Cpn10) (groES protein) (Heat shock protein A) K04078 groES; chaperonin GroES
D LLO_2504 dnaJ; chaperone protein DnaJ (heat shock protein) K03686 dnaJ; molecular chaperone DnaJ
D LLO_2308 IscS; putative similar cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LLO_0061 grlA; glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D LLO_1099 putative unknown protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LLO_2813 putative Polyprenyltransferase (cytochrome oxidase assembly factor) K02257 COX10; heme o synthase [EC:2.5.1.141]
D LLO_0153 ctaG; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LLO_2814 putative conserved hypothetical proteins, hypothetical cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LLO_3448 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LLO_2816 Hypothetical protein, SURF1 family K14998 SURF1; surfeit locus 1 family protein
D LLO_2812 putative hypothetical proteins K07152 SCO1; protein SCO1
D LLO_1455 htpG; Class III heat-shock protein HtpG(molecular chaperone) K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:llo02000]
D LLO_1084 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LLO_2900 putative ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D LLO_1419 abcT; ABC transporter, ATP binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LLO_1207 putative multidrug resistance ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LLO_1434 mdlB; ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LLO_1018 putative ABC transporter K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D LLO_0910 uup; fused ATP-binding subunits of ABC superfamily protein involved in precise excision of transposons K15738 uup; ABC transport system ATP-binding/permease protein
D LLO_2583 potD; putative spermidine/putrescine-binding periplasmic protein precursor potD (SPBP) K11069 potD; spermidine/putrescine transport system substrate-binding protein
D LLO_2584 potC; putative spermidine/putrescine transport system permease protein potC. K11070 potC; spermidine/putrescine transport system permease protein
D LLO_2585 potB; putative spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D LLO_2586 potA; putative spermidine/putrescine transport system ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D LLO_3290 putative ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LLO_3289 putative ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LLO_0607 ugpB; putative glycerol-3-phosphate-binding periplasmic protein precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D LLO_2263 ugpA; glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D LLO_2262 ugpE; glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D LLO_2261 ugpC; glycerol-3-phosphate transporter subunit; ATP-binding component of ABC superfamily K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D LLO_2089 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LLO_2020 yrbD; toluene transporter subunit: membrane component of ABC superfamily K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LLO_2091 putative ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LLO_2021 yrbE; toluene transporter subunit: membrane component of ABC superfamily K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LLO_2090 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LLO_2022 yrbF; toluene transporter subunit: ATP-binding component of ABC superfamily K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LLO_2088 Conserved hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D LLO_2019 putative unknown protein K07323 mlaC; phospholipid transport system substrate-binding protein
D LLO_2018 putative anti-anti-sigma factor K07122 mlaB; phospholipid transport system transporter-binding protein
D LLO_1069 metQ; DL-methionine transporter subunit; periplasmic-binding component of ABC superfamily K02073 metQ; D-methionine transport system substrate-binding protein
D LLO_1070 metI; DL-methionine transporter subunit; membrane component protein of ABC superfamily K02072 metI; D-methionine transport system permease protein
D LLO_1071 metN; DL-methionine transporter subunit; ATP-binding component of ABC superfamily K02071 metN; D-methionine transport system ATP-binding protein
D LLO_3019 putative glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LLO_3374 putative amino acid ABC transporter, periplasmic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LLO_2280 yqiX; amino acid (glutamine) ABC transporter, periplasmic amino acid binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LLO_1221 putative arginine-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LLO_2279 yecS; putative transporter subunit: permease component of ABC superfamily transporter K02029 ABC.PA.P; polar amino acid transport system permease protein
D LLO_2278 putative ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D LLO_1932 hbpA; bacterial extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LLO_1931 putative ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LLO_1930 putative ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LLO_0764 yliA; putative peptide transport fused subunits of ABC superfamily: ATP-binding components K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LLO_2373 putative periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LLO_2377 FecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D LLO_2376 FecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D LLO_2378 fhuC; Ferrichrome transport ATP-binding protein fhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D LLO_2970 putative ABC transporter, permease component K09816 znuB; zinc transport system permease protein
D LLO_2971 putative ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D LLO_3151 ctrC; Capsule polysaccharide export inner-membrane protein ctrC K09688 kpsM; capsular polysaccharide transport system permease protein
D LLO_3152 ctrB; Capsule polysaccharide export inner-membrane protein ctrB K10107 kpsE; capsular polysaccharide transport system permease protein
D LLO_3150 ctrD; Capsule polysaccharide export ATP-binding protein ctrD (Capsular-polysaccharide-transporting ATPase) K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D LLO_0422 Predicted membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D LLO_0423 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D LLO_2027 lptB; putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LLO_0593 lolE; outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily K09808 lolC_E; lipoprotein-releasing system permease protein
D LLO_0594 lolD; outer membrane-specific lipoprotein transporter subunit; ATP-binding component of ABC superfamily K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LLO_1967 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D LLO_1968 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D LLO_1969 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D LLO_1970 ccmA; heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D LLO_0375 ftsX; putative cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D LLO_0374 ftsE; putative cell division ABC transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D LLO_2821 yadH; putative transporter subunit: membrane component of ABC superfamily K01992 ABC-2.P; ABC-2 type transport system permease protein
D LLO_0442 putative ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LLO_2283 putative ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D LLO_2286 putative ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D LLO_0981 putative ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D LLO_2284 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LLO_0443 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LLO_0980 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LLO_2822 yadG; putative transporter subunit: ATP-binding component of ABC superfamily K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LLO_0132 putative ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LLO_2149 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LLO_0131 putative ATP-binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LLO_2150 putative ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LLO_3071 sufC; component of SufBCD complex, ATP-binding component of ABC superfamily K09013 sufC; Fe-S cluster assembly ATP-binding protein
D LLO_3082 Similar to eukaryotic proteins, contains 2 mitochondrial carrier protein domains K15109 SLC25A20_29; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
D LLO_1370 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D LLO_2236 putative sugar-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D LLO_2802 ywtG; D-xylose (galactose, arabinose)-proton symporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D LLO_1823 tphB; proline/glycine betaine transporter-like protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LLO_2553 putative major facilitator family transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LLO_1408 shiA; shikimate transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D LLO_1061 uhpC; membrane protein regulates uhpT expression K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D LLO_2063 putative AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LLO_2389 sflR; putative florfenicol efflux pump-like protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LLO_1684 putative major facilitator superfamily (MFS) transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LLO_1030 putative major facilitator superfamily (MFS) transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LLO_2613 putative multidrug resistance protein K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D LLO_2722 putative multidrug resistance protein, MFS superfamily K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D LLO_1493 cmr; multidrug efflux system protein K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D LLO_0538 emrB; multidrug efflux system protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D LLO_1177 putative multidrug resistance protein, MFS superfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D LLO_0186 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D LLO_2712 npr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) K08485 ptsO; phosphocarrier protein NPr
D LLO_1239 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LLO_0350 sspA; putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D LLO_0163 putative hypothetical tetratricopeptide repeat protein K07114 yfbK; Ca-activated chloride channel homolog
D LLO_0164 putative unknwon proteins K07114 yfbK; Ca-activated chloride channel homolog
D LLO_0165 putative unknown protein K07114 yfbK; Ca-activated chloride channel homolog
D LLO_1946 yccA; Inner membrane protein yccA K19416 yccA; modulator of FtsH protease
D LLO_1120 mscL; mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D LLO_1687 putative mechanosensitive channel protein K05802 mscK; potassium-dependent mechanosensitive channel
D LLO_1409 putative mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D LLO_1885 putative small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein
D LLO_1510 tolQ; putative TolQ, involved in the tonB-independent uptake of proteins K03562 tolQ; biopolymer transport protein TolQ
D LLO_1511 tolR; membrane spanning protein in TolA-TolQ-TolR complex K03560 tolR; biopolymer transport protein TolR
D LLO_3053 crcB; Protein crcB homolog K06199 crcB; fluoride exporter
D LLO_2436 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D LLO_2003 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D LLO_0301 putative Mg2+ and Co2+ transporter CorB, hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LLO_1654 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LLO_1102 putative long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein
D LLO_3417 helC; HelC protein K15725 czcC; outer membrane protein, heavy metal efflux system
D LLO_0806 tolC; putative outer membrane protein TolC K12340 tolC; outer membrane protein
D LLO_0129 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D LLO_2364 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_2411 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_0441 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_3190 oprM; outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_3149 bexD; Capsule polysaccharide export protein bexD precursor K01991 wza; polysaccharide biosynthesis/export protein
D LLO_0010 Hypothetical protein, carbohydrate-selective porin OprB domain K07267 oprB; porin
D LLO_2688 yaeT; outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D LLO_1534 PQQ (pyrrolo-quinoline quinone) enzyme repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D LLO_1293 putative competence lipoprotein comL precursor K05807 bamD; outer membrane protein assembly factor BamD
D LLO_0530 smpA; small protein A, tmRNA-binding K06186 bamE; outer membrane protein assembly factor BamE
D LLO_1107 putative surface antigen K07278 tamA; translocation and assembly module TamA
D LLO_1106 hypothetical protein K09800 tamB; translocation and assembly module TamB
D LLO_0712 Protein with a bacterial immunoglobulin-like domain K21449 ata; trimeric autotransporter adhesin
D LLO_2026 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D LLO_2025 Conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D LLO_0467 ostA; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D LLO_2336 rlpB; Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D LLO_1780 ybeX; putative protein involved in divalent ion export K06189 corC; hemolysin (HlyC) family protein
D LLO_3235 Predicted membrane protein K06518 cidA; holin-like protein
D LLO_1699 putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D LLO_2844 putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D LLO_1231 putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D LLO_0313 czcD; cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D LLO_3415 helA; HelA protein K15726 czcA; heavy metal efflux system protein
D LLO_3380 putative multidrug efflux pump K15726 czcA; heavy metal efflux system protein
D LLO_0819 putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LLO_0547 putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LLO_2800 putative integral membrane protein, AcrB/AcrD/AcrF family K18138 acrB; multidrug efflux pump
D LLO_1257 mdtB; multidrug efflux system, subunit B K07788 mdtB; multidrug efflux pump
D LLO_1258 mdtC; multidrug efflux system, subunit C K07789 mdtC; multidrug efflux pump
D LLO_3147 sugE; multidrug efflux system protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D LLO_3055 eamA; cysteine and O-acetyl-L-serine efflux system K15268 eamA; O-acetylserine/cysteine efflux transporter
D LLO_3240 putative Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter
D LLO_0678 dctA; C4-dicarboxylic acid, orotate and citrate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D LLO_p0046 nhaA; sodium-proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D LLO_3113 yjcE; putative cation/proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D LLO_3195 putative sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter
D LLO_1250 kefC; potassium:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D LLO_0958 ybaL; putative monovalent cation:proton antiporter (CPA2 family) K26735 KEA4_5_6; K+:H+ antiporter
D LLO_2930 ybaL; putative monovalent cation:proton antiporter (CPA2 family) K26735 KEA4_5_6; K+:H+ antiporter
D LLO_3060 ybaL; putative monovalent cation:proton antiporter (CPA2 family) K26735 KEA4_5_6; K+:H+ antiporter
D LLO_2053 putative Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter
D LLO_1189 yicO; xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D LLO_2532 putative tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D LLO_2533 putative tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D LLO_2618 sdaC; putative serine transporter K03837 sdaC; serine transporter
D LLO_1886 clcA; putative voltage-gated chloride channel protein (ClC-type) K03281 clcA; chloride channel protein, CIC family
D LLO_2265 clcA; chloride channel, voltage-gated K03281 clcA; chloride channel protein, CIC family
D LLO_0216 putative chloride channel protein K03281 clcA; chloride channel protein, CIC family
D LLO_2208 putative chromate transporter K07240 chrA; chromate transporter
D LLO_0461 putative chromate transport protein K07240 chrA; chromate transporter
D LLO_2441 putative high-affinity nickel-transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D LLO_2647 ychM; putative transporter K03321 TC.SULP; sulfate permease, SulP family
D LLO_2467 putative sulfate permease with a cNMP binding motif K03321 TC.SULP; sulfate permease, SulP family
D LLO_0728 Sulfate permease and related transporters K03321 TC.SULP; sulfate permease, SulP family
D LLO_1597 Hypothetical protein (cNMP-domain) K03321 TC.SULP; sulfate permease, SulP family
D LLO_3283 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D LLO_2640 mviN; Virulence factor mviN homolog K03980 murJ; putative peptidoglycan lipid II flippase
D LLO_0994 Virulence factor mviN homolog K03980 murJ; putative peptidoglycan lipid II flippase
D LLO_1295 putative low affinity potassium transport system protein Kup K03549 kup; KUP system potassium uptake protein
D LLO_2388 putative potassium uptake protein K03549 kup; KUP system potassium uptake protein
D LLO_0149 putative transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D LLO_2704 putative LysE type translocator K05835 rhtC; threonine efflux protein
D LLO_3043 putative lysE family transporter protein K05835 rhtC; threonine efflux protein
D LLO_3094 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D LLO_2915 Conserved hypothetical membrane protein K09125 yhhQ; queuosine precursor transporter
D LLO_2102 putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D LLO_2995 Multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D LLO_2757 ftsW; Cell division protein ftsW K03588 ftsW; cell division protein FtsW
D LLO_2167 putative membrane protein K23242 mntP; manganese efflux pump family protein
D LLO_3111 putative conserved hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D LLO_2087 pal; Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL) K03640 pal; peptidoglycan-associated lipoprotein
D LLO_1512 tolA; TolA colicin import membrane protein K03646 tolA; colicin import membrane protein
D LLO_1513 tolB; TolB protein K03641 tolB; TolB protein
D LLO_1678 putative acylaminoacyl-peptidase protein K03641 tolB; TolB protein
D LLO_2547 mdcA; malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D LLO_0539 emrA; multidrug efflux system K03543 emrA; membrane fusion protein, multidrug efflux system
D LLO_1178 emrA; multidrug efflux system K03543 emrA; membrane fusion protein, multidrug efflux system
D LLO_0695 putative HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D LLO_2362 putative HlyD family secretion protein K15549 mdtN; membrane fusion protein, multidrug efflux system
D LLO_3416 helB; HelB protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D LLO_3381 putative cation efflux system protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D LLO_2901 putative HlyD family secretion protein K13408 cvaA; membrane fusion protein
D LLO_0546 putative HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_0820 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_2799 putative efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_1256 mdtA; multidrug efflux system, subunit A K07799 mdtA; membrane fusion protein, multidrug efflux system
D LLO_0389 feoA; ferrous iron transporter A K04758 feoA; ferrous iron transport protein A
D LLO_0390 feoB; ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D LLO_2000 putative tryptophan-rich sensory protein K05770 TSPO; translocator protein
D LLO_4007 ecnA; entericidin A membrane lipoprotein, antidote entericidin B K16347 ecnA; entericidin A
D LLO_1965 ccmF; cytochrome C-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:llo02044]
D LLO_0806 tolC; putative outer membrane protein TolC K12340 tolC; outer membrane protein
D LLO_0129 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D LLO_2901 putative HlyD family secretion protein K13408 cvaA; membrane fusion protein
D LLO_2900 putative ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D LLO_1186 lspD; type II protein secretion LspD K02453 gspD; general secretion pathway protein D
D LLO_1185 lspE; type II protein secretion ATPase LspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LLO_1449 lspF; type II secretory pathway protein LspF K02455 gspF; general secretion pathway protein F
D LLO_1448 lspG; type II secretory pathway protein LspG K02456 gspG; general secretion pathway protein G
D LLO_0380 Homologous to type II secretory pathway protein LspG K02456 gspG; general secretion pathway protein G
D LLO_1447 lspH; type II secretory pathway protein LspH K02457 gspH; general secretion pathway protein H
D LLO_1446 lspI; type II secretory pathway protein LspI K02458 gspI; general secretion pathway protein I
D LLO_1445 lspJ; type II secretory pathway protein LspJ K02459 gspJ; general secretion pathway protein J
D LLO_1444 lspK; type II secretory pathway protein LspK K02460 gspK; general secretion pathway protein K
D LLO_1274 putative general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D LLO_1273 putative general secretion pathway protein K02462 gspM; general secretion pathway protein M
D LLO_1587 pilD; Type 4 prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LLO_1233 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D LLO_1589 pilB; pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D LLO_1588 pilC; pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D LLO_2581 pilE; Type-IV pilin K02655 pilE; type IV pilus assembly protein PilE
D LLO_1530 pilF; fimbrial biogenesis and twitching motility protein PilF K02656 pilF; type IV pilus assembly protein PilF
D LLO_0874 pilM; Tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM
D LLO_0875 pilN; Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D LLO_0876 pilO; Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D LLO_0877 pilP; Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D LLO_0878 pilQ; type IV pilus (Tfp) assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D LLO_0899 yggR; transporter K02669 pilT; twitching motility protein PilT
D LLO_0569 uptC; type II secretion system protein K02670 pilU; twitching motility protein PilU
D LLO_2577 putative pre-pilin leader sequence (pilV) K02671 pilV; type IV pilus assembly protein PilV
D LLO_2578 putative Tfp pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D LLO_2579 putative Tfp pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D LLO_2580 putative type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D LLO_1489 pilZ; putative type 4 fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D LLO_2576 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D LLO_1167 fimV; FimV protein K08086 fimV; pilus assembly protein FimV
D LLO_0897 putative integral membrane protein K02221 yggT; YggT family protein
D LLO_2049 hypothetical protein K02237 comEA; competence protein ComEA
D LLO_2587 putative DNA uptake/competence proteins K02238 comEC; competence protein ComEC
D LLO_2887 traG; Conjugal transfer protein traG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D LLO_1834 traG; mating contact stabilization protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D LLO_p0028 putative sex pilus assembly and mating pair protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D LLO_1837 putative conjugative transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D LLO_p0025 putative conjugative transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D LLO_1838 putative conjugative transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D LLO_p0024 putative conjugative transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D LLO_1839 putative conjugative transfer protein K12059 trbC; conjugal transfer pilus assembly protein TrbC
D LLO_p0023 putative conjugative transfer protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D LLO_1840 putative conjugative transfer protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D LLO_p0022 putative conjugative transfer protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D LLO_1841 traW; Type-F conjugative transfer system protein K12061 traW; conjugal transfer pilus assembly protein TraW
D LLO_p0021 putative conjugative transfer protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D LLO_p0020 putative TrbI protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D LLO_1842 trbI; F pilus extension/retraction protein TrbI Inner membrane protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D LLO_1843 traC; F pilus assembly protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D LLO_p0019 putative conjugative transfer protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D LLO_1844 putative conjugative transfer protein K12064 traV; conjugal transfer pilus assembly protein TraV
D LLO_1845 putative conjugative transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D LLO_p0017 putative conjugative transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D LLO_1846 putative conjugative transfer protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D LLO_p0016 putative conjugative transfer protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D LLO_1847 traE; Type IV conjugative transfer system protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D LLO_p0015 putative conjugative transfer protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D LLO_1848 traL; Type IV conjugative transfer system protein TraL, proteobacteria K12068 traL; conjugal transfer pilus assembly protein TraL
D LLO_1835 traH; TraH pilus assembly protein K12072 traH; conjugative transfer pilus assembly protein TraH
D LLO_p0027 putative conjugative transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D LLO_0364 dotA; defect in organelle trafficking protein DotA K12202 dotA; defect in organelle trafficking protein DotA
D LLO_0367 dotB; defect in organelle trafficking protein DotB (ATPase) K12203 dotB; defect in organelle trafficking protein DotB [EC:7.2.4.8]
D LLO_0368 dotC; defect in organelle trafficking lipoprotein DotC K12204 dotC; defect in organelle trafficking protein DotC
D LLO_0369 dotD; lipoprotein DotD K12205 dotD; defect in organelle trafficking protein DotD
D LLO_2780 dotO; Hypothetical protein of unknown function K12206 icmB; intracellular multiplication protein IcmB [EC:7.2.4.8]
D LLO_2783 dotE; Hypothetical protein of unknown function K12207 icmC; intracellular multiplication protein IcmC
D LLO_2782 dotP; Hypothetical protein of unknown function K12208 icmD; intracellular multiplication protein IcmD
D LLO_1060 icmD; IcmD (DotP) K12208 icmD; intracellular multiplication protein IcmD
D LLO_2785 dotG; putative IcmE/DotG protein K12209 icmE; intracellular multiplication protein IcmE
D LLO_3075 icmF; Hypothetical protein of unknown function K12210 icmF; intracellular multiplication protein IcmF
D LLO_2784 dotF; Component of the Dot/Icm secretion system K12211 icmG; intracellular multiplication protein IcmG
D LLO_2781 dotN; Hypothetical protein of unknown function K12212 icmJ; intracellular multiplication protein IcmJ
D LLO_2786 icmK; Hypothetical protein of unknown function K12213 icmK; intracellular multiplication protein IcmK
D LLO_2787 dotI; Hypothetical protein of unknown function K12214 icmL; intracellular multiplication protein IcmL
D LLO_2788 dotJ; Component of the Dot/Icm secretion system. Predicted inner membrane protein K12215 icmM; intracellular multiplication protein IcmM
D LLO_2789 lphA; Hypothetical protein of unknown function K12216 icmN; intracellular multiplication protein IcmN
D LLO_2790 dotL; Hypothetical protein of unknown function K12217 icmO; intracellular multiplication protein IcmO [EC:7.2.4.8]
D LLO_2791 dotM; Hypothetical protein of unknown function K12218 icmP; intracellular multiplication protein IcmP
D LLO_2792 icmQ; Hypothetical protein of unknown function K12219 icmQ; intracellular multiplication protein IcmQ
D LLO_2794 icmS; Hypothetical protein of unknown function K12221 icmS; intracellular multiplication protein IcmS
D LLO_2795 icmT; Hypothetical protein of unknown function K12222 icmT; intracellular multiplication protein IcmT
D LLO_0363 icmV; intracellular multiplication protein IcmV K12223 icmV; intracellular multiplication protein IcmV
D LLO_0362 icmW; Intracellular multiplication protein IcmW K12224 icmW; intracellular multiplication protein IcmW
D LLO_0361 icmX; Intracellular multiplication protein IcmX K12225 icmX; intracellular multiplication protein IcmX
D LLO_3192 tphA; proline/betaine transport protein homolog K12226 tphA; proline/betaine transport protein TphA
D LLO_2875 virB; LvhB11 K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D LLO_2877 putative conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D LLO_2878 trbD; Conjugal transfer protein trbD K20529 trbD; type IV secretion system protein TrbD
D LLO_2879 trbE; Conjugal transfer protein trbE precursor K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D LLO_2880 trbF; Conjugal transfer protein trbF K20531 trbF; type IV secretion system protein TrbF
D LLO_2881 trbG; Conjugal transfer protein trbG precursor K20532 trbG; type IV secretion system protein TrbG
D LLO_2882 putative conjugal transfer TrbH protein K20267 trbH; type IV secretion system protein TrbH
D LLO_2883 trbI; Conjugal transfer protein trbI K20533 trbI; type IV secretion system protein TrbI
D LLO_2884 trbJ; Conjugal transfer protein trbJ precursor K20266 trbJ; type IV secretion system protein TrbJ
D LLO_2886 trbL; putative conjugal transfer protein trbL K07344 trbL; type IV secretion system protein TrbL
D LLO_1739 secA; Preprotein translocase, secretion protein SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LLO_0576 secB; putative protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LLO_0932 secD; putative protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D LLO_0473 secE; Preprotein translocase secE subunit K03073 secE; preprotein translocase subunit SecE
D LLO_0933 secF; putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LLO_0276 secG; Protein-export membrane protein secG (Preprotein translocase subunit) K03075 secG; preprotein translocase subunit SecG
D LLO_0506 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D LLO_2843 ffh; putative signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LLO_0373 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor
D LLO_0931 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D LLO_3448 yidC; cytoplasmic insertase into membrane protein, Sec system K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LLO_0142 tatA; putative TatA protein(twin arginine translocation) K03116 tatA; sec-independent protein translocase protein TatA
D LLO_0141 tatB; putative TatB protein (twin arginine translocation) K03117 tatB; sec-independent protein translocase protein TatB
D LLO_0124 tatC; putative Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:llo02042]
D LLO_0301 putative Mg2+ and Co2+ transporter CorB, hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LLO_1654 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LLO_0100 yqfA; putative hemolysin, inner membrane subunit K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:llo02022]
D LLO_1782 cpxA; Sensor histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D LLO_1781 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LLO_1158 qseC; sensory histidine kinase in two-component regulatory system with QseB K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LLO_1159 qseB; DNA-binding response regulator in two-component regulatory system with QseC K07666 qseB; two-component system, OmpR family, response regulator QseB
D LLO_2471 putative osmosensitive K+ channel His-kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LLO_2400 putative sensory box sensor histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_3442 putative sensory box histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_2490 putative sensory histidine-kinase / response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LLO_2778 ompR; DNA-binding response regulator in two-component regulatory system with EnvZ K02483 K02483; two-component system, OmpR family, response regulator
D LLO_0302 putative response regulator K02483 K02483; two-component system, OmpR family, response regulator
D LLO_1235 letS; Legionella transmission sensor LetS K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D LLO_2653 letA; Legionella transmission activator LetA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LLO_0752 putative signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D LLO_3302 putative chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LLO_3303 cheB; fused chemotaxis regulator; protein-glutamat K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LLO_2320 fleS; putative sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D LLO_2319 fleR; putative two-component response regulator K10943 flrC; two-component system, response regulator FlrC
C 02035 Bacterial motility proteins [BR:llo02035]
D LLO_3302 putative chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LLO_3298 putative chemotaxis signal transduction protein (cheW domain) K03408 cheW; purine-binding chemotaxis protein CheW
D LLO_3300 putative chemotaxis signal transduction protein (cheW domain) K03408 cheW; purine-binding chemotaxis protein CheW
D LLO_3299 putative methyltransferase involved in chemotaxis (CheR domain) K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LLO_3303 cheB; fused chemotaxis regulator; protein-glutamat K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LLO_1317 flgD; Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D LLO_1128 fliA; sigma factor 28 K02405 fliA; RNA polymerase sigma factor FliA
D LLO_2013 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D LLO_2320 fleS; putative sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D LLO_2319 fleR; putative two-component response regulator K10943 flrC; two-component system, response regulator FlrC
D LLO_0850 Homologous to negative regulator of flagellin synthesis FlgM (Anti-sigma-28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
D LLO_1127 fleN; putative flagellar synthesis regulator K04562 flhG; flagellar biosynthesis protein FlhG
D LLO_0899 yggR; transporter K02669 pilT; twitching motility protein PilT
D LLO_0569 uptC; type II secretion system protein K02670 pilU; twitching motility protein PilU
D LLO_1233 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D LLO_1589 pilB; pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D LLO_1588 pilC; pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D LLO_1587 pilD; Type 4 prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LLO_1530 pilF; fimbrial biogenesis and twitching motility protein PilF K02656 pilF; type IV pilus assembly protein PilF
D LLO_0878 pilQ; type IV pilus (Tfp) assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D LLO_0877 pilP; Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D LLO_0876 pilO; Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D LLO_0875 pilN; Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D LLO_0874 pilM; Tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM
D LLO_1489 pilZ; putative type 4 fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D LLO_2577 putative pre-pilin leader sequence (pilV) K02671 pilV; type IV pilus assembly protein PilV
D LLO_2578 putative Tfp pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D LLO_2579 putative Tfp pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D LLO_2580 putative type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D LLO_2581 pilE; Type-IV pilin K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:llo04812]
D LLO_2048 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D LLO_2751 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LLO_2752 ftsA; ATP-binding cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LLO_1523 putative cell division inhibitor MinC (septum placement) K03610 minC; septum site-determining protein MinC
D LLO_2253 minD; Septum site-determining protein (Cell division inhibitor) K03609 minD; septum site-determining protein MinD
D LLO_2254 minE; Septum formation topological specificity factor K03608 minE; cell division topological specificity factor
D LLO_0158 parA; putative chromosome partitioning protein ParA family K03496 parA; chromosome partitioning protein
D LLO_p0001 putative chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D LLO_0157 parB; putative chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LLO_2620 parB; putative partition protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:llo04147]
D LLO_1455 htpG; Class III heat-shock protein HtpG(molecular chaperone) K04079 HSP90A; molecular chaperone HtpG
D LLO_2717 putative fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LLO_2520 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LLO_3262 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LLO_3263 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LLO_3264 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LLO_0062 ahpC; alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D LLO_0617 htpB; 60 kDa chaperonin (Protein Cpn60)(groEL protein)(Heat shock protein B). K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LLO_2505 dnaK; Chaperone protein DnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) K04043 dnaK; molecular chaperone DnaK
D LLO_0884 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LLO_0205 putative guanosine monophosphate reductase GuaC K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LLO_2252 guaB; putative IMP dehydrogenase/GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LLO_0472 tufA-2; elongation factor Tu K02358 tuf; elongation factor Tu
D LLO_0484 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D LLO_2329 Hypothetical protein, contains eukaryotic Ras-family GTPase and Miro-like domains K07874 RAB1A; Ras-related protein Rab-1A
D LLO_3288 putative Ras family GTPase K07874 RAB1A; Ras-related protein Rab-1A
D LLO_0299 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LLO_0438 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LLO_2606 putative acyl CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_1522 lidS; putative acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LLO_1078 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1817 yfcY; beta-ketoacyl-CoA thiolase, anaerobic, subunit K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LLO_1982 putative zinc-dependent metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D LLO_1088 putative adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LLO_2501 sahH; Adenosylhomocysteinase (S-adenosyl-L-homocysteinehydrolase) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LLO_1497 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LLO_2276 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LLO_2277 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LLO_1500 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LLO_1111 putative glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1450 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LLO_1105 hemB; putative delta-aminolevulinic acid dehydratases (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LLO_0602 lly; 4-hydroxyphenylpyruvate dioxygenase (legiolysin) K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LLO_1341 putative pterin-4-alpha-carbinolamine dehydratase phhB K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LLO_0726 putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LLO_3163 putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LLO_2727 purH; putative phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase (bifunctionnal) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LLO_1759 lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LLO_0868 etfA; Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D LLO_2807 zwf; putative Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LLO_0275 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:llo02048]
D LLO_2867 putative type-1 restriction system, restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LLO_2866 putative type I restriction-modification system (methylase_S) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LLO_2865 putative type I restriction-modification system (N6 DNA methylase) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LLO_2557 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LLO_2937 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LLO_0944 hypothetical protein K19159 yefM; antitoxin YefM
D LLO_2767 putative phage shock protein C, PspC K03973 pspC; phage shock protein C
D LLO_0943 putative prophage maintenance system killer protein K07341 doc; death on curing protein
D LLO_1633 putative plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D LLO_1622 hypothetical protein K07334 higB-1; toxin HigB-1
D LLO_0654 Hypothetical Protein with putative Helix-turn-helix motif K21498 higA-1; antitoxin HigA-1
D LLO_1634 putative plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D LLO_2751 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LLO_2048 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D LLO_3413 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LLO_0763 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LLO_1236 gltX; Glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LLO_1502 hypothetical protein K09159 cptB; antitoxin CptB
D LLO_2308 IscS; putative similar cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors [BR:llo04054]
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins [BR:llo04031]
D LLO_2329 Hypothetical protein, contains eukaryotic Ras-family GTPase and Miro-like domains K07874 RAB1A; Ras-related protein Rab-1A
D LLO_3288 putative Ras family GTPase K07874 RAB1A; Ras-related protein Rab-1A
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:llo04090]
D LLO_1982 putative zinc-dependent metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:llo01504]
D LLO_1201 putative class-D beta-lactamase K22352 blaOXA-29; beta-lactamase class D OXA-29 [EC:3.5.2.6]
D LLO_2680 putative acetyltransferase, GNAT family K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D LLO_3145 putative aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D LLO_0983 aph; spectinomycin phosphotransferase K18844 aph; spectinomycin phosphotransferase
D LLO_1493 cmr; multidrug efflux system protein K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D LLO_0708 hypothetical protein K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-]
D LLO_1199 putative transcriptional regulators K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LLO_3101 putative beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LLO_2675 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_2917 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1611 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_1639 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LLO_0546 putative HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_0820 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_2799 putative efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LLO_0819 putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LLO_0547 putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LLO_2800 putative integral membrane protein, AcrB/AcrD/AcrF family K18138 acrB; multidrug efflux pump
D LLO_2364 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_2411 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_0441 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_3190 oprM; outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LLO_0806 tolC; putative outer membrane protein TolC K12340 tolC; outer membrane protein
D LLO_0129 putative outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:llo00537]
D LLO_3440 treF; Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:llo03100]
D LLO_t0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LLO_t0042 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LLO_t0016 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LLO_t0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LLO_t0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LLO_t0021 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LLO_t0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LLO_t0040 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LLO_t0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LLO_t0027 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LLO_t0046 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LLO_t0019 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LLO_t0039 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LLO_t0022 tRNA-His K14226 tRNA-His; tRNA His
D LLO_t0003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LLO_t0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LLO_t0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LLO_t0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LLO_t0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LLO_t0043 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LLO_t0032 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LLO_t0033 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LLO_t0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D LLO_t0002 tRNA-Met K14230 tRNA-Met; tRNA Met
D LLO_t0038 tRNA-Met K14230 tRNA-Met; tRNA Met
D LLO_t0030 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LLO_t0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LLO_t0014 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LLO_t0036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LLO_t0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LLO_t0009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LLO_t0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LLO_t0015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LLO_t0010 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LLO_t0004 tRNA-Val K14237 tRNA-Val; tRNA Val
D LLO_t0024 tRNA-Val K14237 tRNA-Val; tRNA Val
D LLO_t0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D LLO_r0004 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0007 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0012 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0001 ribosomal RNA 16S K01977 16SrRNA; 16S ribosomal RNA
D LLO_r0002 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0011 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0005 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0008 ribosomal RNA 23S K01980 23SrRNA; 23S ribosomal RNA
D LLO_r0003 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0010 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0009 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_r0006 ribosomal RNA 5S K01985 5SrRNA; 5S ribosomal RNA
D LLO_mr0002 SRP_bact K01983 ffs; SRP RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D LLO_0814 yueD; sepiapterin reductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D LLO_1125 putative oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D LLO_2848 fadH; putative 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D LLO_2372 putative NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D LLO_1145 etfD; electron transfer flavoprotein-ubiquinon K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D LLO_0789 qor; Quinone oxidoreductase (NADPH:quinone reductase) K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D LLO_2264 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D LLO_0137 msrA; bifunctional methionine sulfoxide reductase B/A protein K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D LLO_3382 yfcG; putative S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D LLO_0451 yqjG; S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D LLO_2928 yqjG; S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D LLO_1385 putative alternative oxidase (eukaryotic-like) K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11]
D LLO_0207 putative bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LLO_2623 putative organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LLO_2770 putative alkyl hydroperoxide reductase D, carboxymuconolactonedecarboxylase K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D LLO_2771 ahpC; alkyl hydroperoxide reductase, peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D LLO_0039 putative hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D LLO_3359 hypothetical protein K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39]
D LLO_3115 yfgD; putative oxidoreductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D LLO_0807 pcm; protein-L-isoaspartate-O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D LLO_3372 cfa; cyclopropane fatty acyl phospholipid synthase (Cyclopropane fatty acid synthase) (CFA synthase) K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LLO_2113 putative cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LLO_1407 tam; trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D LLO_1386 putative tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D LLO_2334 putative apolipoprotein N-acyltransferase (ALP N-acyltransferase) (copper homeostasis protein CutE) K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D LLO_p0063 putative transcriptional regulator, MarR family K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D LLO_2326 aat; putative leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D LLO_2543 putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D LLO_0185 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D LLO_1559 putative conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D LLO_0612 glnE; putative glutamine synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D LLO_1103 putative reverse transcriptase (RNA-directed DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D LLO_1873 Hypothetical Protein, reverse transcriptase domain K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D LLO_2544 hypothetical protein K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D LLO_0203 putative lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D LLO_0176 putative unknown protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LLO_1509 ybgC; acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LLO_1777 putative TrpH protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D LLO_1141 putative Acid sphingomyelinase-like phosphodiesterase K01128 SMPDL3; sphingomyelin phosphodiesterase acid-like 3 [EC:3.1.4.-]
D LLO_1999 Hypothetical protein, similar to sphingomyelin phosphodiesterase K01128 SMPDL3; sphingomyelin phosphodiesterase acid-like 3 [EC:3.1.4.-]
D LLO_p0068 putative endonuclease-1 K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D LLO_1490 lidH; putative deoxyribonuclease belonging to the TatD DNAse family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LLO_1237 putative D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D LLO_3200 putative D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D LLO_0630 def; putative polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LLO_0750 putative polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LLO_1347 putative polysaccharide deacetylase-related protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LLO_2575 putative peptidoglycan GlcNAc deacetylase proteins K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LLO_0770 putative polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LLO_1945 putative hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D LLO_1905 putative thiocyanate hydrolase alpha subunit K20760 scnA; thiocyanate hydrolase subunit alpha [EC:3.5.5.8]
D LLO_0168 putative MoxR-like ATPases, putative regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LLO_2546 putative malonate decarboxylase, delta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D LLO_2545 mdcE; Malonate decarboxylase gamma-subunit, MdcE K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D LLO_0352 yjeF; putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D LLO_2537 cphA; Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D LLO_2316 mpl; putative UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D LLO_0195 rnfB; Electron transport complex protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D LLO_0710 putative cation transport ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D LLO_0360 putative cation transport ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D LLO_0022 putative cation transport ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D LLO_2392 putative calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D LLO_0434 mgtA; magnesium transporter K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D LLO_1226 putative ferredoxin K05524 fdxA; ferredoxin
D LLO_3068 putative NifU protein family, possibly involved in the formation or repair of [Fe-S] clusters K04488 iscU; nitrogen fixation protein NifU and related proteins
D LLO_2309 putative iron-sulpher cluster proteins NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D LLO_0867 etfB; Electron transfer flavoprotein beta-subunit (Beta-ETF) K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D LLO_1313 fabD; Malonyl CoA-acyl carrier protein transacylase (MCT) K15355 K15355; malonyl CoA-acyl carrier protein transacylase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D LLO_0788 putative membrane protein K06203 cysZ; CysZ protein
D LLO_0898 yggS; putative enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D LLO_1797 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D LLO_1796 TPR repeat protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D LLO_0322 hemY; protoporphyrinogen IX and coproporphyrinogen III oxidase HemY K02498 hemY; HemY protein
D LLO_0143 ubiB; putative P.aeruginosa probable ubiquinone biosynthesis protein ubiB K03688 ubiB; ubiquinone biosynthesis protein
D LLO_0144 putative conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D LLO_2735 putative conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
D LLO_0239 yieF; chromate reductase, Class I, flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D LLO_0527 putative phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D LLO_0240 cspC; stress protein, member of the CspA-family K03704 cspA; cold shock protein
D LLO_1310 cspI; cold shock protein; Qin prophage K03704 cspA; cold shock protein
D LLO_0099 cspE; DNA-binding transcriptional repressor K03704 cspA; cold shock protein
D LLO_2157 cspE; DNA-binding transcriptional repressor K03704 cspA; cold shock protein
D LLO_2797 cspD; putative Cold shock-like protein CspD K03704 cspA; cold shock protein
D LLO_0956 cspC; stress protein, member of the CspA-family K03704 cspA; cold shock protein
D LLO_2734 glnB; Nitrogen regulatory protein K04752 glnK; nitrogen regulatory protein P-II 2
D LLO_0212 yhgF; transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D LLO_2197 putative metallo-beta-lactamase family protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D LLO_2042 clpS; regulatory protein for ClpA substrate specificity K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D LLO_1282 tig; peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 tig; trigger factor
D LLO_0208 smpB; trans-translation protein K03664 smpB; SsrA-binding protein
D LLO_2445 hypC; Hydrogenase expression/formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D LLO_2446 hypD; Hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D LLO_2447 hypE; Hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D LLO_2444 hypF; Hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D LLO_2736 yifB; putative bifunctional enzyme and transcriptional regulator K07391 comM; magnesium chelatase family protein
D LLO_2829 putative 2OG-Fe(II) oxygenase superfamily protein K07394 K07394; SM-20-related protein
D LLO_0069 nfeD; membrane bound peptidase; NefD homolog K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D LLO_3064 radC; DNA repair protein RadC (start is missing) K03630 radC; DNA repair protein RadC
D LLO_1936 rmuC; RmuC family protein K09760 rmuC; DNA recombination protein RmuC
D LLO_0948 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D LLO_3435 hypothetical protein K07460 yraN; putative endonuclease
D LLO_0573 putative endo/excinuclease K07461 K07461; putative endonuclease
D LLO_1384 putative nuclease K07461 K07461; putative endonuclease
D LLO_1181 putative conserved hypothetical protein K07461 K07461; putative endonuclease
D LLO_1246 hypothetical protein K07461 K07461; putative endonuclease
D LLO_1752 hypothetical protein K07461 K07461; putative endonuclease
D LLO_1603 hypothetical protein K07461 K07461; putative endonuclease
D LLO_0692 hypothetical protein K07461 K07461; putative endonuclease
D LLO_0792 hypothetical protein K07461 K07461; putative endonuclease
D LLO_0632 smf; Protein smf K04096 smf; DNA processing protein
D LLO_2322 ycaJ; recombination protein K07478 ycaJ; putative ATPase
D LLO_0946 hypothetical protein K06919 K06919; putative DNA primase/helicase
D LLO_2890 traC; DNA primase traC K06919 K06919; putative DNA primase/helicase
D LLO_2942 hypothetical protein K06919 K06919; putative DNA primase/helicase
D LLO_1495 putative conserved hypothetical proteins K07501 K07501; 3'-5' exonuclease
D LLO_1413 putative transposase and inactivated derivatives K07480 insB; insertion element IS1 protein InsB
D LLO_0106 putative transposase K18320 IS15; transposase, IS6 family
D LLO_1973 insE; IS3 element protein InsE; DLP12 prophage K07483 K07483; transposase
D LLO_2192 putative transposase K07484 K07484; transposase
D LLO_2876 putative transposase K07486 K07486; transposase
D LLO_2905 putative transposase K07486 K07486; transposase
D LLO_2911 putative transposase K07486 K07486; transposase
D LLO_1974 insF; IS3 element protein InsF K07497 K07497; putative transposase
D LLO_1674 putative transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D LLO_0306 putative hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D LLO_0939 putative amino acid (lysine) permease K03293 TC.AAT; amino acid transporter, AAT family
D LLO_0053 putative amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LLO_1553 ydgR; peptide transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LLO_0264 yhiP; transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LLO_1468 Proton-dependent oligopeptide transporter (POT family) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LLO_2075 iraB; di/tripeptide transporter homolog IraB K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LLO_2862 putative proton-dependent oligopeptide transporter (POT family) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LLO_p0004 putative proton-dependent oligopeptide transporter, POT family K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LLO_2742 putative phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D LLO_0057 pit; low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D LLO_1160 yciB; putative intracellular septation protein involved in cell division K06190 ispZ; intracellular septation protein
D LLO_2633 putative spore maturation protein A K06373 spmA; spore maturation protein A
D LLO_2632 putative uncharacterized membrane protein, similar to Bacillus subtilis spore maturation protein B K06374 spmB; spore maturation protein B
D LLO_2693 putative peptidase, M23 family K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D LLO_1763 putative membrane protein K03807 ampE; AmpE protein
D LLO_3267 putative N-terminal part of ProQ, activator of ProP osmoprotectant transporter (truncated?) K03607 proQ; ProP effector
D LLO_1702 putative activator of osmoprotectant transporter ProP (N-terminal part) K03607 proQ; ProP effector
D LLO_1961 UspA; Universal stress protein A K06149 uspA; universal stress protein A
D LLO_0959 putative universal stress family protein K14055 uspE; universal stress protein E
D LLO_2929 putative universal stress protein family K14055 uspE; universal stress protein E
D LLO_p0044 putative conserved hypothetical protein, some similarity with stress proteins K14055 uspE; universal stress protein E
D LLO_0249 typA; putative GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D LLO_1778 putative phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D LLO_0206 putative PhoH protein K07175 phoH2; PhoH-like ATPase
D LLO_0258 putative conserved hypothetical protein K07180 prkA; serine protein kinase
D LLO_1035 putative conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D LLO_2323 lolA; Outer-membrane lipoprotein carrier protein precursor K03634 lolA; outer membrane lipoprotein carrier protein
D LLO_0408 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D LLO_1052 putative conserved lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D LLO_2687 putative outer membrane proteins K06142 hlpA; outer membrane protein
D LLO_1150 nlpD; novel lipoprotein homolog NlpD K06194 nlpD; lipoprotein NlpD
D LLO_1537 hypothetical protein K02022 ABC.MR.TX; HlyD family secretion protein
D LLO_0979 putative HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D LLO_2287 putative HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D LLO_0444 putative HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D LLO_2148 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D LLO_0130 putative conserved lipoprotein K02005 ABC.CD.TX; HlyD family secretion protein
D LLO_0777 putative transporter K11744 tqsA; AI-2 transport protein TqsA
D LLO_1966 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D LLO_1963 ccmH; Cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D LLO_1531 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D LLO_2339 dedE; colicin V K03558 cvpA; membrane protein required for colicin V production
D LLO_2678 chaB; putative conserved cation transport regulator K06197 chaB; cation transport regulator
D LLO_2079 putative phospholipid binding protein K04065 osmY; hyperosmotically inducible periplasmic protein
D LLO_0937 csaA; chaperonin CsaA K06878 K06878; tRNA-binding protein
D LLO_2592 hypothetical protein K06886 glbN; hemoglobin
D LLO_2991 putative hemoglobin (protozoan/cyanobacterial globin family) K06886 glbN; hemoglobin
D LLO_1244 putative integral membrane protein K06994 K06994; putative drug exporter of the RND superfamily
D LLO_0263 putative patatin-like phospholipase K07001 K07001; NTE family protein
D LLO_0751 putative patatin-like phospholipase K07001 K07001; NTE family protein
D LLO_1748 putative phospholipase, patatin family K07001 K07001; NTE family protein
D LLO_1791 putative phospholipase, patatin family K07001 K07001; NTE family protein
D LLO_2395 putative patatin-like phospholipase K07001 K07001; NTE family protein
D LLO_2301 putative patatin-like phospholipase K07001 K07001; NTE family protein
D LLO_1476 yadR; putative chaperone involved in Fe-S cluster assembly and activation; hesB-like K15724 erpA; iron-sulfur cluster insertion protein
D LLO_3072 sufB; component of SufBCD complex K09014 sufB; Fe-S cluster assembly protein SufB
D LLO_3070 sufD; component of SufBCD complex K09015 sufD; Fe-S cluster assembly protein SufD
D LLO_0677 hypothetical protein K07038 K07038; inner membrane protein
D LLO_0453 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D LLO_0209 putative unknown protein K07146 K07146; UPF0176 protein
D LLO_0553 putative LemA from Coxiella burnetii K03744 lemA; LemA protein
D LLO_2340 Conserved hypothetical protein K03749 dedD; DedD protein
D LLO_0757 dedA; transmembrane protein DedA family protein K03975 dedA; membrane-associated protein
D LLO_1002 hypothetical protein K08995 K08995; putative membrane protein
D LLO_1251 Hypothetical protein with a SEC-C domain (potential nucleic acid binding domain) K09858 K09858; SEC-C motif domain protein
D LLO_1323 phnA; alkylphosphonate uptake protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D LLO_1142 Ankyrin repeat protein K06867 K06867; uncharacterized protein
D LLO_1168 Ankyrin repeat protein K06867 K06867; uncharacterized protein
D LLO_0246 putative ankyrin repeat protein K06867 K06867; uncharacterized protein
D LLO_0037 putative ankyrin repeat protein K06867 K06867; uncharacterized protein
D LLO_0732 Conserved hypothetical protein K06889 K06889; uncharacterized protein
D LLO_0110 hypothetical protein K06893 K06893; uncharacterized protein
D LLO_3225 hypothetical protein K06934 K06934; uncharacterized protein
D LLO_2111 putative flavin containing amine oxidoreductase K06954 K06954; uncharacterized protein
D LLO_3399 putative succinylglutamate desuccinylase / aspartoacylase family K06987 K06987; uncharacterized protein
D LLO_1879 putative succinylglutamate desuccinylase/Aspartoacylase family protein K06987 K06987; uncharacterized protein
D LLO_0758 Glyoxalase/Bleomycin resistance family protein K06991 K06991; uncharacterized protein
D LLO_1140 putative glyoxalase/bleomycin resistance protein K06996 K06996; uncharacterized protein
D LLO_0776 putative glyoxalase/bleomycin resistance protein K06996 K06996; uncharacterized protein
D LLO_0387 hypothetical protein K07018 K07018; uncharacterized protein
D LLO_2481 putative alpha/beta hydrolase K07019 K07019; uncharacterized protein
D LLO_3402 Conserved hypothetical protein K07071 K07071; uncharacterized protein
D LLO_0801 putative transmembrane protein K07090 K07090; uncharacterized protein
D LLO_0121 Hypothetical protein similar to Xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D LLO_0734 putative transmembrane protein K07112 K07112; uncharacterized protein
D LLO_0735 putative transmembrane protein K07112 K07112; uncharacterized protein
D LLO_3436 putative lipoprotein K07121 K07121; uncharacterized protein
D LLO_1443 putative Sel1 repeat protein K07126 K07126; uncharacterized protein
D LLO_2944 hypothetical protein K07133 K07133; uncharacterized protein
D LLO_3449 putative conserved hypothetical protein K08998 K08998; uncharacterized protein
D LLO_2856 lporfX; putative conserved hypothetical protein K09117 K09117; uncharacterized protein
D LLO_0767 hypothetical protein K09131 K09131; uncharacterized protein
D LLO_0694 hypothetical protein K09137 K09137; uncharacterized protein
D LLO_3052 hypothetical protein K09137 K09137; uncharacterized protein
D LLO_1767 hypothetical protein K09158 K09158; uncharacterized protein
D LLO_2112 hypothetical protein K09701 K09701; uncharacterized protein
D LLO_2225 hypothetical protein K09768 K09768; uncharacterized protein
D LLO_1925 yciI; putative enzyme K09780 K09780; uncharacterized protein
D LLO_0257 putative conserved hypothetical protein K09786 K09786; uncharacterized protein
D LLO_1229 putative hypothetical protein K09791 K09791; uncharacterized protein
D LLO_0529 Conserved hypothetical protein K09801 K09801; uncharacterized protein
D LLO_2677 putative RNA-binding protein K00243 K00243; uncharacterized protein
D LLO_2128 hypothetical protein K09822 K09822; uncharacterized protein
D LLO_1380 hypothetical protein K09857 K09857; uncharacterized protein
D LLO_1452 putative conserved hypothetical protein K09861 K09861; uncharacterized protein
D LLO_3339 putative conserved hypothetical protein K09895 K09895; uncharacterized protein
D LLO_p0062 hypothetical protein K09898 K09898; uncharacterized protein
D LLO_0755 putative conserved hypothetical protein K09930 K09930; uncharacterized protein
D LLO_1754 putative conserved hypothetical protein K09930 K09930; uncharacterized protein
D LLO_2741 putative conserved hypothetical protein K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024