+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Listeria monocytogenes HCC23 (serotype 4a)

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E LMHCC_1026 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] E LMHCC_0753 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E LMHCC_1594 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-] E LMHCC_1134 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-] E LMHCC_1170 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] E LMHCC_0151 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] E LMHCC_0322 3-5 exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Helicases E LMHCC_1762 cold-shock deAd box protein a (atp-dependent rna helicasedead) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E LMHCC_1329 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E LMHCC_1119 dead/deah box ATP dependent helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] E LMHCC_0614 ATP-dependent DNA helicase, recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] E LMHCC_2768 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E LMHCC_0145 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E LMHCC_1239 polyribonucleotide nucleotidyltransferase (Polynucleotidephosphorylase) (PNPase) (Vegetative protein 15) (VEG15) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E LMHCC_0047 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho E LMHCC_0998 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E LMHCC_1097 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK E LMHCC_0490 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E LMHCC_1277 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D Others E LMHCC_0126 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024