+D GENES KO #

  KEGG Orthology (KO) - Limosilactobacillus reuteri subsp. reuteri JCM 1112

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:lrf00010] D LAR_1139 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LAR_0415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LAR_0229 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LAR_0383 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0162 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0228 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0381 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LAR_0382 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LAR_0140 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LAR_0279 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LAR_0384 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LAR_0722 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LAR_0608 pyruvate dehydrogenase complex E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D LAR_0609 pyruvate dehydrogenase complex E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D LAR_0610 pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_0688 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0185 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1206 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0853 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1785 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1313 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0310 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LAR_1406 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1444 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1489 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D LAR_1448 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LAR_0369 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:lrf00020] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_1440 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LAR_0608 pyruvate dehydrogenase complex E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D LAR_0609 pyruvate dehydrogenase complex E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D LAR_0610 pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:lrf00030] D LAR_0415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LAR_1653 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LAR_0562 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D LAR_1654 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LAR_1100 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LAR_0286 ribose 5-phosphate epimerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D LAR_1574 xylulose 5-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D LAR_0105 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D LAR_0399 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D LAR_1218 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D LAR_0106 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D LAR_0172 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D LAR_0369 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LAR_0589 phosphoribosyl pyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LAR_0212 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LAR_0810 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12] D LAR_0763 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12] D LAR_0229 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00040 Pentose and glucuronate interconversions [PATH:lrf00040] D LAR_0361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LAR_0469 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D LAR_1100 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LAR_0470 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] C 00051 Fructose and mannose metabolism [PATH:lrf00051] D LAR_0854 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LAR_0855 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LAR_0229 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LAR_0383 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0162 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0228 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:lrf00052] D LAR_1448 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LAR_1662 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LAR_1661 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D LAR_0328 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LAR_0361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LAR_0369 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LAR_1139 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LAR_0276 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LAR_0277 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LAR_1032 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D LAR_1293 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LAR_0857 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D LAR_1559 PTS system galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D LAR_0972 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D LAR_0078 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism D LAR_0469 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:lrf00500] D LAR_0972 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D LAR_1452 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D LAR_0361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LAR_0225 PTS cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component D LAR_1507 neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D LAR_0078 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D LAR_0052 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8] D LAR_0053 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D LAR_0369 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LAR_1139 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LAR_0415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LAR_0854 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LAR_0855 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lrf00520] D LAR_0980 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D LAR_0854 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LAR_0855 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LAR_0405 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LAR_0404 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D LAR_0211 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LAR_0459 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LAR_0223 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LAR_0398 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LAR_0301 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LAR_1308 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LAR_1139 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LAR_0369 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LAR_0361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LAR_1662 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LAR_1661 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D LAR_0328 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LAR_1293 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LAR_0415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00620 Pyruvate metabolism [PATH:lrf00620] D LAR_0608 pyruvate dehydrogenase complex E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D LAR_0609 pyruvate dehydrogenase complex E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D LAR_0610 pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_0310 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LAR_1406 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1444 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1489 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D LAR_1621 acetate kinase PduW K00925 ackA; acetate kinase [EC:2.7.2.1] D LAR_0543 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LAR_0393 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LAR_0722 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LAR_0918 acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LAR_0922 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LAR_0920 biotin/pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LAR_0919 acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LAR_1155 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D LAR_0688 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0185 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1206 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0853 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1785 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1313 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0040 UDP-glucose 4-epimerase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LAR_1580 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LAR_1523 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LAR_0656 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LAR_0478 conserved hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D LAR_1440 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LAR_1441 malolactic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lrf00630] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_1135 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LAR_0445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_0601 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LAR_0481 conserved hypothetical protein K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] C 00640 Propanoate metabolism [PATH:lrf00640] D LAR_1621 acetate kinase PduW K00925 ackA; acetate kinase [EC:2.7.2.1] D LAR_0543 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LAR_0393 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LAR_1628 propanediol utilization protein PduL K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_0918 acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LAR_0922 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LAR_0920 biotin/pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LAR_0919 acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LAR_0189 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LAR_0688 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0185 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1206 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0853 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1785 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1313 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1724 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D LAR_1635 glycerol dehydratase large subunit PduC K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28] D LAR_1634 glycerol dehydratase medium subunit PduD K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28] D LAR_1633 glycerol dehydratase small subunit PduE K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28] D LAR_0029 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] D LAR_1622 propanol dehydrogenase PduQ K13921 pduQ; 1-propanol dehydrogenase D LAR_1623 propanediol utilization protein PduP K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87] C 00650 Butanoate metabolism [PATH:lrf00650] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_0097 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LAR_0310 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LAR_0189 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LAR_0033 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LAR_0649 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D LAR_0126 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LAR_0127 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D LAR_1360 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D LAR_0155 conserved hypothetical protein K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:lrf00660] D LAR_0126 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LAR_0127 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00562 Inositol phosphate metabolism [PATH:lrf00562] D LAR_0613 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LAR_0383 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0162 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0228 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:lrf00190] D LAR_0495 putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D LAR_0491 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LAR_0492 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LAR_0455 ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LAR_0457 ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LAR_0456 ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LAR_0454 ATP synthase delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LAR_0458 ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LAR_0451 ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LAR_0453 ATP synthase B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LAR_0452 ATP synthase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LAR_0755 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D LAR_0326 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:lrf00680] D LAR_0445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LAR_0384 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LAR_0229 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LAR_1621 acetate kinase PduW K00925 ackA; acetate kinase [EC:2.7.2.1] D LAR_0543 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LAR_0393 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LAR_0140 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LAR_0279 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:lrf00910] D LAR_0951 nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LAR_0939 nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LAR_0938 nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LAR_0936 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LAR_1135 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LAR_0420 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:lrf00920] D LAR_0517 exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D LAR_0782 hypothetical protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D LAR_1676 homoserine O-succinyltransferase K23304 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LAR_1677 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D LAR_1459 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:lrf00061] D LAR_0918 acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LAR_0922 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LAR_0920 biotin/pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LAR_0919 acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LAR_0926 acyl carrier protein K02078 acpP; acyl carrier protein D LAR_1093 acyl carrier protein K02078 acpP; acyl carrier protein D LAR_0925 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LAR_0927 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LAR_0923 3-oxoacyl-[acyl-carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LAR_0924 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LAR_0921 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LAR_0929 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LAR_0917 enoyl-[acyl-carrier protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:lrf00071] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_0310 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LAR_1406 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1444 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1489 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:lrf00121] D LAR_0701 conjugated bile salt hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:lrf00561] D LAR_0601 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LAR_1724 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D LAR_1012 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D LAR_1094 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LAR_0751 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LAR_0653 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LAR_1350 transcription regulator K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LAR_1254 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LAR_0300 glycosyltransferase K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D LAR_1513 phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LAR_1723 alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LAR_0857 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D LAR_0029 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] C 00564 Glycerophospholipid metabolism [PATH:lrf00564] D LAR_0360 glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D LAR_0751 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LAR_0653 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LAR_1350 transcription regulator K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LAR_0062 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D LAR_0664 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D LAR_0507 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D LAR_0046 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D LAR_1678 cardiolipinsynthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:lrf00600] D LAR_0276 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LAR_0277 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LAR_0857 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:lrf00230] D LAR_0580 conserved hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LAR_0106 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D LAR_0172 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D LAR_0369 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LAR_0589 phosphoribosyl pyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LAR_0212 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LAR_0135 phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D LAR_0139 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D LAR_0137 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D LAR_0134 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D LAR_0132 phosphoribosylformylglycinamidine synthase PurS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D LAR_0133 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D LAR_0136 phosphoribosylaminoimidazole synthase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D LAR_1357 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D LAR_0129 phosphoribosylaminoimidazole carboxylase II K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D LAR_0128 phosphoribosylaminoimidazole carboxylase I K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D LAR_0131 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D LAR_0130 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LAR_0138 phosphoribosylaminoimidazolecarboxamide/formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LAR_0983 translation initiation factor IF-2 K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D LAR_0108 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D LAR_1802 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LAR_0256 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LAR_0110 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LAR_0192 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LAR_0528 xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D LAR_1209 xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D LAR_1358 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D LAR_1530 conserved hypothetical protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D LAR_1510 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LAR_0065 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D LAR_1529 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LAR_1109 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LAR_0312 ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LAR_0311 ribonucleotide diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LAR_1249 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D LAR_0692 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LAR_0195 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D LAR_0327 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D LAR_0325 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D LAR_0556 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D LAR_0054 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D LAR_0066 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LAR_1373 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LAR_0420 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:lrf00240] D LAR_0877 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LAR_0080 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LAR_0876 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LAR_0081 carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LAR_0117 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LAR_0118 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D LAR_0119 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D LAR_0121 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D LAR_0120 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D LAR_0659 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D LAR_0192 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LAR_1530 conserved hypothetical protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D LAR_0221 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D LAR_0732 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D LAR_1148 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D LAR_0983 translation initiation factor IF-2 K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D LAR_0446 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D LAR_0068 pyrimidine operon regulator K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D LAR_0823 putative inosine-uridine nucleoside N-ribohydrolase K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D LAR_0107 pyrimidine nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D LAR_0248 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D LAR_1249 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D LAR_0312 ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LAR_0311 ribonucleotide diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LAR_0621 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D LAR_0319 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D LAR_0288 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LAR_0441 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D LAR_0739 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LAR_1242 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D LAR_1241 putative oxidoreductase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:lrf00250] D LAR_0270 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D LAR_1782 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LAR_1767 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D LAR_1814 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D LAR_0336 conserved hypothetical protein K13566 NIT2; omega-amidase [EC:3.5.1.3] D LAR_0702 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LAR_0703 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LAR_0066 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LAR_0130 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LAR_0117 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LAR_0189 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LAR_0033 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LAR_1135 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LAR_0877 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LAR_0080 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LAR_0876 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LAR_0081 carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LAR_1188 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LAR_0237 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LAR_0133 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D LAR_0405 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LAR_0135 phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:lrf00260] D LAR_0591 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LAR_0598 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LAR_0445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LAR_0601 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LAR_0140 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LAR_0279 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_1020 L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LAR_1021 L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00270 Cysteine and methionine metabolism [PATH:lrf00270] D LAR_1676 homoserine O-succinyltransferase K23304 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LAR_1677 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D LAR_1459 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D LAR_0281 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LAR_1793 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LAR_0993 homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D LAR_1229 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D LAR_0582 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D LAR_0337 aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D LAR_1486 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LAR_0591 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LAR_0598 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LAR_0058 gamma-glutamylcysteine synthase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LAR_1314 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LAR_0688 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0185 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1206 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0853 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1785 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1313 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1020 L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LAR_1021 L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:lrf00280] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_0649 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lrf00290] D LAR_0126 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00300 Lysine biosynthesis [PATH:lrf00300] D LAR_0591 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LAR_0598 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LAR_0595 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LAR_0596 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D LAR_0366 peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LAR_0181 peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LAR_1454 putative Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LAR_0590 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LAR_0592 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D LAR_0593 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89] D LAR_1133 aromatic amino acid aminotransferas K00841 patA; aminotransferase [EC:2.6.1.-] D LAR_0041 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LAR_0715 amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LAR_0597 aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LAR_0594 amino acid amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D LAR_0299 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D LAR_1784 putative aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D LAR_0234 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:lrf00310] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_0033 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:lrf00220] D LAR_0419 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D LAR_0702 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LAR_0703 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LAR_0435 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D LAR_1188 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LAR_0237 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LAR_0133 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D LAR_1135 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LAR_0420 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00330 Arginine and proline metabolism [PATH:lrf00330] D LAR_0248 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D LAR_0813 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LAR_0032 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D LAR_0333 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D LAR_0335 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D LAR_1539 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism D LAR_1717 histidine decarboxylase K01590 hdc; histidine decarboxylase [EC:4.1.1.22] C 00350 Tyrosine metabolism [PATH:lrf00350] D LAR_0310 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LAR_1406 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1444 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1489 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D LAR_0249 2-oxo-hepta-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D LAR_0033 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LAR_1480 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00360 Phenylalanine metabolism [PATH:lrf00360] D LAR_0097 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LAR_1480 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D LAR_0813 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LAR_1786 2-oxo-hept-3-ene-1,7-dioate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:lrf00380] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_0813 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:lrf00410] D LAR_0189 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LAR_1242 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D LAR_1241 putative oxidoreductase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] C 00430 Taurine and hypotaurine metabolism [PATH:lrf00430] D LAR_0393 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LAR_1621 acetate kinase PduW K00925 ackA; acetate kinase [EC:2.7.2.1] D LAR_0543 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:lrf00450] D LAR_0281 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LAR_1793 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LAR_0839 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D LAR_0365 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D LAR_1018 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D LAR_0201 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:lrf00460] D LAR_1782 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LAR_1767 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D LAR_0445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:lrf00470] D LAR_0245 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LAR_0465 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LAR_0243 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LAR_0241 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LAR_1188 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LAR_0237 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LAR_0133 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D LAR_0527 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LAR_0570 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LAR_0270 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D LAR_0590 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LAR_0592 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:lrf00480] D LAR_0058 gamma-glutamylcysteine synthase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LAR_1314 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LAR_1765 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LAR_1327 conserved hypothetical protein K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D LAR_1654 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LAR_1653 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:lrf00511] D LAR_0276 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LAR_0277 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis D LAR_1289 lipopolysaccharide 1,6-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lrf00541] D LAR_0361 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LAR_0328 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LAR_1293 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LAR_1003 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LAR_1002 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D LAR_0211 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LAR_0301 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LAR_1308 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:lrf00550] D LAR_0459 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LAR_0223 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LAR_0398 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LAR_1184 ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LAR_0570 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LAR_0465 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LAR_0234 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LAR_0708 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D LAR_0663 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LAR_0569 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LAR_0571 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LAR_0867 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LAR_1203 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LAR_0568 cell division protein FtsI/penicillin-binding protein 2 K08724 pbpB; penicillin-binding protein 2B D LAR_1144 penicillin binding protein 2B K21465 pbpA; penicillin-binding protein A D LAR_1450 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LAR_0440 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D LAR_0439 putative cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:lrf00552] D LAR_0075 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LAR_1190 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LAR_0076 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LAR_0243 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LAR_0241 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LAR_0242 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export D LAR_0240 D-alanyl transfer protein DltD K03740 dltD; D-alanine transfer protein D LAR_1004 transcription regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D LAR_1273 putative transcription regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D LAR_1513 phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LAR_1723 alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LAR_1254 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LAR_1253 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:lrf00543] D LAR_1772 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:lrf00730] D LAR_0969 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LAR_1205 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LAR_0583 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_0488 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_0489 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D LAR_0902 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LAR_0968 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D LAR_0970 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D LAR_1101 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LAR_1099 conserved hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D LAR_1373 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:lrf00740] D LAR_0826 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LAR_0824 riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LAR_1795 conserved hypothetical protein K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D LAR_0846 putative hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D LAR_0827 riboflavin synthase beta subunit K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D LAR_0825 riboflavin synthase alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D LAR_0675 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D LAR_0968 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D LAR_0580 conserved hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:lrf00760] D LAR_0272 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D LAR_0148 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D LAR_0108 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D LAR_0983 translation initiation factor IF-2 K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D LAR_1169 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D LAR_0273 NAD synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D LAR_0198 transcription regulator K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D LAR_0557 conserved hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D LAR_0033 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:lrf00770] D LAR_0126 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LAR_1750 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D LAR_0338 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D LAR_1512 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D LAR_1107 pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D LAR_0618 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D LAR_1179 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D LAR_0244 holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D LAR_1242 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D LAR_1241 putative oxidoreductase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] C 00780 Biotin metabolism [PATH:lrf00780] D LAR_0923 3-oxoacyl-[acyl-carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LAR_0924 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LAR_0921 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LAR_0929 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LAR_0917 enoyl-[acyl-carrier protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D LAR_0705 biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:lrf00785] D LAR_0216 conserved hypothetical protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204] D LAR_1565 lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_0608 pyruvate dehydrogenase complex E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D LAR_0609 pyruvate dehydrogenase complex E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D LAR_0610 pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00790 Folate biosynthesis [PATH:lrf00790] D LAR_1213 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D LAR_1212 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D LAR_1208 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D LAR_0740 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LAR_0496 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D LAR_1210 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D LAR_0826 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LAR_0953 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D LAR_0941 molybdopterin biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D LAR_0942 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D LAR_0944 molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:lrf00670] D LAR_0740 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LAR_0125 formyltetrahydrofolate synthase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D LAR_1116 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LAR_0445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LAR_0137 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D LAR_0138 phosphoribosylaminoimidazolecarboxamide/formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LAR_1105 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LAR_0739 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LAR_1142 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:lrf00860] D LAR_1591 glutamyl-tRNA reductase HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D LAR_1588 glutamate-1-semialdehyde 2,1-aminotransferase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D LAR_1589 delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D LAR_1590 porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D LAR_1460 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D LAR_1600 uroporphyrinogen-III C-methyltransferase CobA K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D LAR_1592 putative siroheme synthase CysG K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D LAR_1599 cobalt chelatase CbiK K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D LAR_1598 precorrin-2 C20-methyltransferase CbiL K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D LAR_1602 precorrin-3B C17-methyltransferase CbiH K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D LAR_1604 precorrin-4 C11-methyltransferase CbiF K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D LAR_1603 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D LAR_1601 precorrin-6X reductase CbiJ K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D LAR_1607 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D LAR_1605 precorrin-8W decarboxylase CbiT K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D LAR_1606 precorrin-6Y C5,15-methyltransferase CbiE K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D LAR_1608 precorrin-8X methylmutase CbiC K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D LAR_1610 cobyrinic acid A,C-diamide synthase CbiA K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D LAR_1613 putative ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D LAR_1625 propanediol utilization protein PduO K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D LAR_1593 cobyric acid synthase CbiP K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D LAR_1609 cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D LAR_1587 cobinamide kinase/cobinamide phosphate guanylyltransferase CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D LAR_1586 cobalamin 5'-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D LAR_1583 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase CobT K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D LAR_1585 alpha-ribazole-5'-phosphate phosphatase CobC K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lrf00130] D LAR_1027 menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D LAR_1462 hypothetical protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D LAR_0834 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D LAR_0833 dihydroxynapthoic acid synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D LAR_0832 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D LAR_1030 conserved hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D LAR_0173 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:lrf00900] D LAR_0902 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LAR_0206 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_0649 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D LAR_0196 hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D LAR_0862 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D LAR_0860 mevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D LAR_0861 mevalonate diphosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D LAR_0859 isopentenyl diphosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D LAR_1113 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D LAR_0663 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:lrf00523] D LAR_1003 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LAR_1002 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:lrf01054] D LAR_0270 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D LAR_1003 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D LAR_1451 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis D LAR_0335 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] C 00261 Monobactam biosynthesis [PATH:lrf00261] D LAR_0591 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LAR_0598 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LAR_0595 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LAR_0596 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:lrf00521] D LAR_1139 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LAR_0369 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LAR_0613 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LAR_1003 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LAR_1002 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D LAR_1139 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D LAR_1003 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D LAR_0925 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LAR_0924 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LAR_0917 enoyl-[acyl-carrier protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D LAR_0926 acyl carrier protein K02078 acpP; acyl carrier protein D LAR_1093 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D LAR_1229 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:lrf00362] D LAR_1786 2-oxo-hept-3-ene-1,7-dioate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LAR_1013 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LAR_1791 conserved hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D LAR_0097 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:lrf00627] D LAR_0813 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LAR_1155 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:lrf00625] D LAR_1406 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1444 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1489 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D LAR_0310 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation D LAR_1480 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00622 Xylene degradation [PATH:lrf00622] D LAR_1480 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D LAR_1013 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LAR_1786 2-oxo-hept-3-ene-1,7-dioate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:lrf00643] D LAR_0813 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:lrf00621] D LAR_1013 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LAR_1786 2-oxo-hept-3-ene-1,7-dioate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation [PATH:lrf00626] D LAR_1406 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1444 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LAR_1489 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D LAR_0310 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:lrf03020] D LAR_1402 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LAR_1401 DNA-directed RNA polymerase beta-prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LAR_1368 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LAR_1108 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LAR_0220 DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:lrf03010] D LAR_0733 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LAR_0657 30S Ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LAR_1388 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LAR_0486 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LAR_1377 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LAR_0007 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LAR_1397 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LAR_1380 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LAR_1361 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LAR_1395 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LAR_1369 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LAR_1398 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LAR_1370 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LAR_1381 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LAR_1024 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LAR_0625 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LAR_1087 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LAR_1385 50S ribosomal protein L17 K02961 RP-S17; small subunit ribosomal protein S17 D LAR_0009 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LAR_1390 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LAR_0624 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LAR_0699 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LAR_0298 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LAR_1391 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LAR_1394 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LAR_1393 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LAR_1382 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LAR_1379 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LAR_0303 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LAR_0011 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LAR_0302 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LAR_0297 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LAR_1362 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LAR_1384 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LAR_1375 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LAR_1387 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LAR_1367 50S Ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LAR_1378 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LAR_1082 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LAR_1173 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LAR_1124 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LAR_1389 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LAR_1392 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LAR_1383 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LAR_1122 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LAR_1098 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LAR_1386 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LAR_1376 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LAR_0224 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LAR_1162 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LAR_0294 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LAR_1143 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LAR_1820 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LAR_1174 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LAR_1371 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LAR_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA05 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA06 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA05 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:lrf00970] D LAR_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LAR_tRNA19 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA40 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA35 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA33 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA42 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA61 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA06 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LAR_tRNA08 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LAR_tRNA25 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LAR_tRNA32 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LAR_tRNA36 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LAR_tRNA49 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LAR_tRNA12 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LAR_tRNA10 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LAR_tRNA60 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LAR_tRNA13 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA53 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA58 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA43 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA30 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA27 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA57 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA17 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA39 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA54 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA52 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA04 tRNA-His K14226 tRNA-His; tRNA His D LAR_tRNA48 tRNA-His K14226 tRNA-His; tRNA His D LAR_tRNA01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LAR_tRNA28 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LAR_tRNA18 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA55 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA50 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA51 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA38 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA62 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LAR_tRNA63 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LAR_tRNA15 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LAR_tRNA21 tRNA-Met K14230 tRNA-Met; tRNA Met D LAR_tRNA24 tRNA-Met K14230 tRNA-Met; tRNA Met D LAR_tRNA31 tRNA-Met K14230 tRNA-Met; tRNA Met D LAR_tRNA22 tRNA-Met K14230 tRNA-Met; tRNA Met D LAR_tRNA26 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LAR_tRNA45 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LAR_tRNA20 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LAR_tRNA56 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LAR_tRNA34 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LAR_tRNA41 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LAR_tRNA23 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LAR_tRNA29 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LAR_tRNA07 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LAR_tRNA05 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LAR_tRNA03 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LAR_tRNA16 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LAR_tRNA47 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LAR_tRNA09 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LAR_tRNA46 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LAR_tRNA37 tRNA-Val K14237 tRNA-Val; tRNA Val D LAR_tRNA59 tRNA-Val K14237 tRNA-Val; tRNA Val D LAR_tRNA44 tRNA-Val K14237 tRNA-Val; tRNA Val D LAR_tRNA14 tRNA-Val K14237 tRNA-Val; tRNA Val D LAR_1134 glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LAR_1352 glutamyl-tRNA amidotransferase A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LAR_1351 glutamyl-tRNA amidotransferase B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LAR_1353 glutamyl-tRNA amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LAR_0519 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LAR_0695 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LAR_1768 asparaginyl-tRNA synthase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LAR_0711 glycyl-tRNA synthase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LAR_0712 glycyl-tRNA synthase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LAR_1745 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LAR_0091 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LAR_0291 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LAR_0201 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LAR_1105 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LAR_0490 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LAR_1228 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LAR_0578 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LAR_0260 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LAR_1204 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LAR_0666 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LAR_1731 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LAR_1715 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LAR_1151 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LAR_1150 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LAR_0142 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LAR_0194 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:lrf03060] D LAR_1374 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D LAR_0295 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LAR_0516 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D LAR_1818 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LAR_1156 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LAR_0354 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LAR_1088 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LAR_1090 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D LAR_1811 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LAR_0874 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:lrf04122] D LAR_0583 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_0488 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_0585 tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LAR_0953 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D LAR_0952 molybdenum cofactor biosynthesis protein D K03636 moaD; sulfur-carrier protein D LAR_0940 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D LAR_0941 molybdopterin biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D LAR_0489 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:lrf03018] D LAR_0384 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LAR_0389 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LAR_0235 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LAR_0730 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LAR_0510 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D LAR_1425 putative metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LAR_0626 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LAR_0679 heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LAR_0343 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LAR_0326 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:lrf03030] D LAR_0397 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LAR_0721 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LAR_0667 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LAR_0315 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LAR_0321 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LAR_0623 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LAR_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LAR_0012 replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LAR_0713 DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D LAR_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LAR_0873 putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LAR_0648 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LAR_0747 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LAR_1181 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LAR_1355 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:lrf03410] D LAR_0187 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LAR_0392 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LAR_1686 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D LAR_1180 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LAR_1230 3-methyladenine-DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LAR_1435 putative uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LAR_1037 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LAR_1243 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LAR_1181 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LAR_1355 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:lrf03420] D LAR_0252 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LAR_0899 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LAR_0373 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LAR_0372 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LAR_0634 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D LAR_1356 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_1517 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_0191 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_1181 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LAR_1355 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:lrf03430] D LAR_0511 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LAR_0524 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D LAR_0512 DNA mismatch repair protein HexB K03572 mutL; DNA mismatch repair protein MutL D LAR_1356 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_1517 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_0191 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_1115 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LAR_1114 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LAR_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LAR_0721 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LAR_0667 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LAR_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LAR_0315 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LAR_0623 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LAR_0321 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LAR_0397 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LAR_1355 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:lrf03440] D LAR_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LAR_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D LAR_0710 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LAR_0317 recombination protein RecR K06187 recR; recombination protein RecR D LAR_0509 recombinase RecA K03553 recA; recombination protein RecA D LAR_1181 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LAR_0513 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LAR_0514 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LAR_1095 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LAR_0588 exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LAR_0721 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LAR_0667 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LAR_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LAR_0315 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LAR_0623 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LAR_0321 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LAR_0397 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LAR_1106 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:lrf02010] D LAR_1534 spermidine/putrescine ABC transporter substrate-binding component K11069 potD; spermidine/putrescine transport system substrate-binding protein D LAR_1535 spermidine/putrescine ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein D LAR_1536 spermidine/putrescine ABC transporter permease component K11071 potB; spermidine/putrescine transport system permease protein D LAR_1537 spermidine/putrescine ABC transporter ATP-binding component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D LAR_0175 glycine betaine/choline ABC transporter substrate bindingcomponent K05845 opuC; osmoprotectant transport system substrate-binding protein D LAR_0176 glycine betaine/choline ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein D LAR_0178 glycine betaine/choline ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein D LAR_0177 glycine betaine/choline ABC transporter ATP-binding component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D LAR_0400 ribose transport protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D LAR_1474 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D LAR_1473 phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D LAR_1472 phosphate ABC transporter permease component K02038 pstA; phosphate transport system permease protein D LAR_1471 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LAR_0092 glutamine ABC transporter substrate binding and permease components K10036 glnH; glutamine transport system substrate-binding protein D LAR_0093 glutamine ABC transporter ATP-binding component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D LAR_1421 glutamine ABC transporter substrate binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D LAR_1423 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LAR_1422 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LAR_1420 glutamine ABC transporter ATP-binding component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D LAR_0284 ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D LAR_0282 ABC transporter permease component K10009 tcyB; L-cystine transport system permease protein D LAR_0283 ABC transporter ATP-binding component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D LAR_0698 amino acid ABC transporter substrate binding and permease components K17077 artQ; arginine/lysine/histidine transport system permease protein D LAR_0697 amino acid ABC transporter ATP-binding component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D LAR_1132 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D LAR_1485 ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D LAR_0184 conserved hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D LAR_0182 ABC transporter permease component K02072 metI; D-methionine transport system permease protein D LAR_0183 ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D LAR_1596 cobalt ABC transporter permease component CbiN K02009 cbiN; cobalt/nickel transport protein D LAR_1597 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D LAR_1595 cobalt ABC transporter permease component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D LAR_1594 cobalt ABC transporter ATP-binding component CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D LAR_0704 putative biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component D LAR_1364 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LAR_1552 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LAR_1366 cobalt ABC transporter ATP-binding component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LAR_1365 cobalt ABC transporter ATP-binding component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LAR_1332 conserved hypothetical protein K11051 cylB; multidrug/hemolysin transport system permease protein D LAR_1331 ABC transporter ATP-binding component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D LAR_1675 ABC transporter permease and substrate binding components K19084 braE; bacitracin transport system permease protein D LAR_1674 ABC transporter ATP-binding component K19083 braD; bacitracin transport system ATP-binding protein D LAR_0017 multidrug ABC transporter ATP-binding and permease components K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LAR_1579 multidrug ABC transporter ATP-binding and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D LAR_1578 multidrug ABC transporter ATP-binding and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D LAR_0494 cytochrome D ABC transporter ATP-binding and permease components K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D LAR_0493 cytochrome D ABC transporter ATP-binding and permease components K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:lrf02060] D LAR_1255 phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LAR_0447 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LAR_1256 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D LAR_0225 PTS cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component D LAR_1559 PTS system galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component C 03070 Bacterial secretion system [PATH:lrf03070] D LAR_0295 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LAR_1374 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D LAR_0516 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D LAR_1818 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LAR_1156 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LAR_0354 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LAR_1090 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D LAR_1088 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:lrf02020] D LAR_1475 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D LAR_1474 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D LAR_0023 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D LAR_0019 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LAR_0018 two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D LAR_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LAR_1675 ABC transporter permease and substrate binding components K19084 braE; bacitracin transport system permease protein D LAR_1674 ABC transporter ATP-binding component K19083 braD; bacitracin transport system ATP-binding protein D LAR_1673 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D LAR_1672 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D LAR_0243 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LAR_0242 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export D LAR_0241 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LAR_0240 D-alanyl transfer protein DltD K03740 dltD; D-alanine transfer protein D LAR_1431 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D LAR_1160 two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LAR_1161 two-component response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D LAR_0849 two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D LAR_0850 two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT D LAR_0851 conserved hypothetical protein K05338 lrgA; holin-like protein D LAR_0852 conserved hypothetical protein K05339 lrgB; holin-like protein LrgB D LAR_0939 nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LAR_0938 nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LAR_0936 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LAR_0937 nitrate reductase delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D LAR_0946 two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D LAR_0844 hypothetical phage protein K07696 nreC; two-component system, NarL family, response regulator NreC D LAR_0947 two component response regulator K07696 nreC; two-component system, NarL family, response regulator NreC D LAR_1135 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_0418 two-component response regulator K07719 glnL; two-component system, response regulator GlnL D LAR_1188 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LAR_0237 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LAR_1638 transcriptional regulator PocR K07720 yesN; two-component system, response regulator YesN D LAR_0491 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LAR_0492 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LAR_0231 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D LAR_1481 phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D LAR_0301 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LAR_1308 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:lrf02024] D LAR_1486 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LAR_0824 riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LAR_1818 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LAR_1156 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LAR_0295 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LAR_1374 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D LAR_0516 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D LAR_0354 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LAR_1090 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D LAR_1088 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:lrf02040] D LAR_0284 ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D LAR_0714 RNA polymerase sigma-43 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D LAR_0384 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D LAR_1613 putative ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D LAR_1625 propanediol utilization protein PduO K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:lrf01501] D LAR_1451 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LAR_0017 multidrug ABC transporter ATP-binding and permease components K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LAR_0867 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LAR_1203 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:lrf01502] D LAR_0465 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LAR_0245 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LAR_0234 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LAR_0569 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LAR_0571 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lrf01503] D LAR_0023 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D LAR_0243 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LAR_0242 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export D LAR_0241 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LAR_0240 D-alanyl transfer protein DltD K03740 dltD; D-alanine transfer protein D LAR_1431 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:lrf01000] C 01001 Protein kinases [BR:lrf01001] D LAR_1102 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D LAR_0019 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LAR_1673 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D LAR_1160 two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LAR_0946 two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D LAR_0849 two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:lrf01009] D LAR_1103 protein kinase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:lrf01002] D LAR_0874 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D LAR_0285 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LAR_1763 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LAR_1510 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LAR_0060 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D LAR_0071 conserved hypothetical protein K07010 K07010; putative glutamine amidotransferase D LAR_1283 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_1269 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_1286 muramidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_0603 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_1701 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_0135 phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D LAR_0405 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LAR_1814 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D LAR_1432 putative 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D LAR_0701 conjugated bile salt hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D LAR_0227 sortase K07284 srtA; sortase A [EC:3.4.22.70] D LAR_0686 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LAR_0554 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LAR_1577 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LAR_1712 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LAR_1015 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LAR_1216 conserved hypothetical protein K07052 K07052; CAAX protease family protein D LAR_1424 conserved hypothetical protein K07052 K07052; CAAX protease family protein D LAR_1765 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LAR_1682 endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-] D LAR_1224 dipeptidase K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-] D LAR_0366 peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LAR_0181 peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LAR_1454 putative Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LAR_0719 tripeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D LAR_0594 amino acid amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D LAR_1304 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D LAR_0535 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D LAR_1120 Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D LAR_0257 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LAR_0233 heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D LAR_0665 conserved hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D LAR_0023 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D LAR_1450 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LAR_0379 endopeptidase Clp proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D LAR_1538 Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11] D LAR_0619 endopeptidase K07177 K07177; Lon-like protease D LAR_0650 SOS-response transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D LAR_1811 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LAR_1539 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D LAR_1141 conserved hypothetical protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D LAR_0646 phage capsid protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease C 01003 Glycosyltransferases [BR:lrf01003] D LAR_1254 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LAR_0300 glycosyltransferase K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D LAR_1253 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] D LAR_0867 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LAR_1203 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LAR_0075 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LAR_1190 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LAR_0076 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LAR_1772 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:lrf01005] D LAR_1289 lipopolysaccharide 1,6-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] D LAR_1295 glycosyltransferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lrf01011] D LAR_0459 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LAR_0223 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LAR_0398 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LAR_1184 ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LAR_0570 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LAR_0465 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LAR_0245 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LAR_0527 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LAR_0569 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LAR_0571 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LAR_0867 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LAR_1203 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LAR_0568 cell division protein FtsI/penicillin-binding protein 2 K08724 pbpB; penicillin-binding protein 2B D LAR_1144 penicillin binding protein 2B K21465 pbpA; penicillin-binding protein A D LAR_1450 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LAR_1283 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_1269 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_1286 muramidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_0603 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_1701 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LAR_0227 sortase K07284 srtA; sortase A [EC:3.4.22.70] C 01004 Lipid biosynthesis proteins [BR:lrf01004] D LAR_0925 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LAR_0927 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LAR_0923 3-oxoacyl-[acyl-carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LAR_0924 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LAR_0921 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LAR_0929 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LAR_0917 enoyl-[acyl-carrier protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D LAR_1094 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LAR_0751 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LAR_0653 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:lrf01008] D LAR_0270 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:lrf01006] D LAR_1113 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D LAR_0663 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LAR_1136 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LAR_1030 conserved hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:lrf01007] D LAR_1134 glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LAR_0142 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LAR_0194 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LAR_0291 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LAR_1204 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LAR_0201 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LAR_0578 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LAR_0490 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LAR_1228 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LAR_0260 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LAR_0695 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LAR_1768 asparaginyl-tRNA synthase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LAR_1731 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LAR_1715 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LAR_0711 glycyl-tRNA synthase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LAR_0712 glycyl-tRNA synthase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LAR_0091 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LAR_0666 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LAR_1745 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LAR_0519 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LAR_1151 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LAR_1150 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LAR_0337 aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D LAR_1133 aromatic amino acid aminotransferas K00841 patA; aminotransferase [EC:2.6.1.-] D LAR_0041 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LAR_0715 amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LAR_0597 aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LAR_1793 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LAR_0189 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LAR_1588 glutamate-1-semialdehyde 2,1-aminotransferase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:lrf00194] D LAR_0458 ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LAR_0457 ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LAR_0456 ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LAR_0455 ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LAR_0454 ATP synthase delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LAR_0453 ATP synthase B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LAR_0452 ATP synthase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LAR_0451 ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:lrf03000] D LAR_0536 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LAR_1660 galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LAR_1219 ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LAR_0049 transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LAR_1034 lactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LAR_0083 transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LAR_0856 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LAR_0764 transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D LAR_1735 sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D LAR_0473 arabinose operon repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D LAR_1575 transcription regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D LAR_0271 transcription regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D LAR_1657 transcription regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LAR_0016 conserved hypothetical protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA D LAR_1528 transcriptional regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D LAR_1232 ferric uptake regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D LAR_1338 conserved hypothetical protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D LAR_0962 conserved hypothetical protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D LAR_1706 transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D LAR_0307 putative transcription regulator K10947 K10947; PadR family transcriptional regulator D LAR_1415 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D LAR_0705 biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D LAR_0210 purine biosynthesis operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D LAR_0599 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D LAR_0341 conserved hypothetical protein K01926 rex; redox-sensing transcriptional repressor D LAR_0771 putative phage repressor K07729 K07729; putative transcriptional regulator D LAR_0099 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LAR_0101 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LAR_0436 putative arginine transcriptional repressor K03402 argR; transcriptional regulator of arginine metabolism D LAR_1111 arginine catabolic regulator K03402 argR; transcriptional regulator of arginine metabolism D LAR_0677 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D LAR_1405 transcription regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D LAR_0356 putative stress-responsive transcription regulator K03973 pspC; phage shock protein C D LAR_0109 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D LAR_0068 pyrimidine operon regulator K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D LAR_1178 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D LAR_0566 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:lrf03021] D LAR_1368 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LAR_1402 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LAR_1401 DNA-directed RNA polymerase beta-prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LAR_0220 DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta D LAR_1108 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LAR_0714 RNA polymerase sigma-43 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D LAR_0831 hypothetical protein K27000 sigH; RNA polymerase sigma-H factor D LAR_0669 transcription termination-antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D LAR_1117 transcription termination factor K03625 nusB; transcription antitermination protein NusB D LAR_0296 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D LAR_1669 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D LAR_1147 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:lrf03019] D LAR_1092 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LAR_1425 putative metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LAR_0626 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LAR_0510 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D LAR_0389 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LAR_0235 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LAR_0518 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D LAR_0730 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LAR_0384 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LAR_0679 heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LAR_0343 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LAR_0326 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D LAR_0375 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:lrf03011] D LAR_0733 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LAR_0657 30S Ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LAR_1388 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LAR_0486 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LAR_1377 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LAR_0007 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LAR_1397 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LAR_1380 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LAR_1361 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LAR_1395 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LAR_1369 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LAR_1398 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LAR_1370 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LAR_1381 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LAR_1024 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LAR_0625 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LAR_1087 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LAR_1385 50S ribosomal protein L17 K02961 RP-S17; small subunit ribosomal protein S17 D LAR_0009 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LAR_1390 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LAR_0624 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LAR_0699 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LAR_0298 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LAR_1391 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LAR_1394 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LAR_1393 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LAR_1382 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LAR_1379 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LAR_0011 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LAR_0302 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LAR_0297 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LAR_0303 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LAR_1362 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LAR_1384 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LAR_1375 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LAR_1387 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LAR_1367 50S Ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LAR_1378 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LAR_1082 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LAR_1173 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LAR_1124 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LAR_1389 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LAR_1392 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LAR_1383 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LAR_1122 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LAR_1098 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LAR_1386 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LAR_1376 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LAR_0224 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LAR_1162 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LAR_0294 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LAR_1143 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LAR_1820 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LAR_1174 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LAR_1371 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LAR_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA05 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA05 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA06 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:lrf03009] D LAR_1092 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LAR_0709 GTP-binding protein K03595 era; GTPase D LAR_0635 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D LAR_0669 transcription termination-antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D LAR_1117 transcription termination factor K03625 nusB; transcription antitermination protein NusB D LAR_0296 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D LAR_0204 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D LAR_1104 rRNA methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LAR_0617 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D LAR_0691 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D LAR_0098 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LAR_0567 conserved hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D LAR_0323 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LAR_1112 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D LAR_0563 rRNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D LAR_0293 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D LAR_0026 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D LAR_1349 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D LAR_0728 putative pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D LAR_0558 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LAR_0875 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LAR_1710 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LAR_1430 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LAR_0331 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D LAR_1085 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D LAR_0690 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D LAR_0521 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D LAR_0292 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D LAR_0235 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LAR_0518 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D LAR_1101 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LAR_0734 GTP-binding protein K03977 engA; GTPase D LAR_0746 GTPase K14540 rbgA; ribosome biogenesis GTPase A D LAR_1520 GTPases K03665 hflX; GTPase D LAR_1171 GTPase K06948 yqeH; 30S ribosome assembly GTPase D LAR_0444 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LAR_0692 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LAR_0673 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D LAR_0668 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP D LAR_0003 conserved hypothetical protein K14761 rlbA; ribosome-associated protein D LAR_1167 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D LAR_0707 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D LAR_1170 conserved hypothetical protein K07574 yhbY; RNA-binding protein D LAR_0353 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D LAR_0103 GTP-binding protein K06942 ychF; ribosome-binding ATPase D LAR_1163 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:lrf03016] D LAR_0636 metal-dependent hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D LAR_0737 polyA polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D LAR_0666 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LAR_0578 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LAR_1228 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LAR_0201 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LAR_1204 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LAR_0260 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LAR_0695 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LAR_0519 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LAR_1768 asparaginyl-tRNA synthase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LAR_1745 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LAR_0091 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LAR_0291 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LAR_0490 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LAR_1731 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LAR_1715 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LAR_1151 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LAR_1150 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LAR_0142 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LAR_0194 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LAR_0693 conserved hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D LAR_1197 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LAR_1194 putative methyl transferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D LAR_1363 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D LAR_0674 pseudouridylate synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D LAR_0583 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_0488 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_0444 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LAR_1136 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LAR_1816 thiophene and furan oxidation protein ThdF K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D LAR_1815 cell division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LAR_1819 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D LAR_0711 glycyl-tRNA synthase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LAR_0712 glycyl-tRNA synthase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LAR_1134 glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LAR_1576 putative transcription regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D LAR_0344 putative DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D LAR_1799 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D LAR_0314 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D LAR_0259 transcription regulator K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D LAR_1084 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D LAR_0717 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D LAR_0564 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D LAR_1154 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D LAR_0585 tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LAR_0515 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D LAR_0489 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D LAR_0255 cell cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D LAR_0330 glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D LAR_0332 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D LAR_0394 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D LAR_1164 conserved hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D LAR_0389 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C 03012 Translation factors [BR:lrf03012] D LAR_0672 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LAR_1175 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LAR_0340 ABC transporter ATP-binding component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D LAR_0658 translation elongation factor Ts K02357 tsf; elongation factor Ts D LAR_0628 elongation factor Tu K02358 tuf; elongation factor Tu D LAR_1396 translation elongation factor G K02355 fusA; elongation factor G D LAR_0442 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D LAR_0660 ribosome recycling factor K02838 frr; ribosome recycling factor D LAR_0443 putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D LAR_0251 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D LAR_1372 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D LAR_1483 translation elongation factor P K02356 efp; elongation factor P D LAR_0355 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D LAR_1272 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:lrf03110] D LAR_1404 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D LAR_1257 ATP-dependent Clp protease ATP-binding subunit ClpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D LAR_0043 ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL D LAR_0630 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D LAR_0679 heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LAR_0343 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LAR_0680 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D LAR_0258 heat shock protein K04083 hslO; molecular chaperone Hsp33 D LAR_0678 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D LAR_1239 small heat shock protein K13993 HSP20; HSP20 family protein D LAR_0342 chaperonin GroES K04078 groES; chaperonin GroES D LAR_0023 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D LAR_0257 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LAR_0451 ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LAR_1443 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D LAR_1199 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D LAR_1708 thioredoxin K03671 TXN; thioredoxin D LAR_0525 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:lrf04131] D LAR_0192 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LAR_0381 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LAR_0140 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LAR_0279 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LAR_0722 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LAR_1746 putative transport protein K06902 UMF1; MFS transporter, UMF1 family D LAR_1747 putative transport protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:lrf04121] C 03051 Proteasome C 03032 DNA replication proteins [BR:lrf03032] D LAR_0873 putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LAR_0648 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LAR_0735 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LAR_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LAR_0012 replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LAR_0713 DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D LAR_1177 DNA replication protein DnaB K03346 dnaB; replication initiation and membrane attachment protein D LAR_1176 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI D LAR_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LAR_0721 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LAR_0667 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LAR_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LAR_0623 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LAR_0321 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LAR_0397 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LAR_0315 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LAR_0747 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LAR_1181 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LAR_1355 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LAR_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LAR_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D LAR_0753 topoisomerase IV A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LAR_0752 topoisomerase IV B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LAR_0749 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:lrf03036] D LAR_1092 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LAR_0735 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LAR_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LAR_1541 conserved hypothetical protein K04047 dps; starvation-inducible DNA-binding protein D LAR_1657 transcription regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LAR_1091 cell division protein K03529 smc; chromosome segregation protein D LAR_0726 conserved hypothetical protein K05896 scpA; segregation and condensation protein A D LAR_0727 conserved hypothetical protein K06024 scpB; segregation and condensation protein B D LAR_0573 cell division protein FtsA K03590 ftsA; cell division protein FtsA D LAR_0565 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LAR_0572 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D LAR_0615 cell division protein K03588 ftsW; cell division protein FtsW D LAR_0574 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LAR_0487 cell division regulatory protein K06286 ezrA; septation ring formation regulator D LAR_0577 cell division initiation protein K04074 divIVA; cell division initiation protein D LAR_0575 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF D LAR_0498 cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LAR_0460 cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LAR_0499 cell shape determining protein MreC K03570 mreC; rod shape-determining protein MreC D LAR_0500 cell shape determining protein MreD K03571 mreD; rod shape-determining protein MreD D LAR_0462 cell division membrane protein K05837 rodA; rod shape determining protein RodA D LAR_0100 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D LAR_0099 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LAR_0101 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LAR_0753 topoisomerase IV A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LAR_0752 topoisomerase IV B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LAR_1815 cell division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LAR_0098 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LAR_0724 integrase/recombinase K04763 xerD; integrase/recombinase XerD D LAR_1345 integrase K04763 xerD; integrase/recombinase XerD D LAR_0817 integrase K04763 xerD; integrase/recombinase XerD D LAR_0981 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D LAR_0631 GTP-binding protein K03978 engB; GTP-binding protein D LAR_0377 conserved hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:lrf03400] D LAR_1323 putative K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D LAR_0392 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LAR_1686 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D LAR_0187 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LAR_0147 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D LAR_0288 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LAR_1435 putative uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LAR_1230 3-methyladenine-DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LAR_1180 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LAR_1037 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LAR_1243 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LAR_1355 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LAR_1181 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LAR_0899 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LAR_0373 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LAR_0372 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LAR_0634 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D LAR_1356 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_1517 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_0191 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LAR_1402 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LAR_1401 DNA-directed RNA polymerase beta-prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LAR_1368 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LAR_0220 DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta D LAR_1108 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LAR_0252 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LAR_0511 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LAR_0524 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D LAR_0512 DNA mismatch repair protein HexB K03572 mutL; DNA mismatch repair protein MutL D LAR_1115 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LAR_1114 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LAR_0721 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LAR_0667 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LAR_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LAR_0623 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LAR_0321 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LAR_0397 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LAR_0315 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LAR_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LAR_0588 exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LAR_0509 recombinase RecA K03553 recA; recombination protein RecA D LAR_0513 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LAR_0514 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LAR_1106 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D LAR_0985 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D LAR_0986 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D LAR_0289 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D LAR_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D LAR_1095 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LAR_0710 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LAR_0317 recombination protein RecR K06187 recR; recombination protein RecR D LAR_1110 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D LAR_0868 recombination protein RecU K03700 recU; recombination protein U D LAR_0048 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D LAR_0047 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D LAR_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LAR_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D LAR_0749 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D LAR_0735 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LAR_0775 hypothetical phage protein K07455 recT; recombination protein RecT D LAR_1075 hypothetical phage protein K07455 recT; recombination protein RecT D LAR_0730 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LAR_1238 DNA-damage repair protein K03502 umuC; DNA polymerase V D LAR_0650 SOS-response transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D LAR_1297 conserved hypothetical protein K03565 recX; regulatory protein D LAR_0863 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D LAR_0312 ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LAR_0311 ribonucleotide diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LAR_0517 exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:lrf03029] D LAR_0672 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LAR_1175 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LAR_0658 translation elongation factor Ts K02357 tsf; elongation factor Ts D LAR_0628 elongation factor Tu K02358 tuf; elongation factor Tu D LAR_1396 translation elongation factor G K02355 fusA; elongation factor G D LAR_0709 GTP-binding protein K03595 era; GTPase D LAR_0142 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LAR_1228 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LAR_0695 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LAR_1204 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LAR_1352 glutamyl-tRNA amidotransferase A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LAR_1351 glutamyl-tRNA amidotransferase B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LAR_1353 glutamyl-tRNA amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LAR_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LAR_0679 heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LAR_0678 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D LAR_0343 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LAR_0342 chaperonin GroES K04078 groES; chaperonin GroES D LAR_0680 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D LAR_0583 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_0488 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_1818 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LAR_1156 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:lrf02000] D LAR_0017 multidrug ABC transporter ATP-binding and permease components K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LAR_1579 multidrug ABC transporter ATP-binding and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D LAR_1578 multidrug ABC transporter ATP-binding and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D LAR_0494 cytochrome D ABC transporter ATP-binding and permease components K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D LAR_0493 cytochrome D ABC transporter ATP-binding and permease components K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D LAR_0738 ABC transporter ATP-binding component K15738 uup; ABC transport system ATP-binding/permease protein D LAR_1534 spermidine/putrescine ABC transporter substrate-binding component K11069 potD; spermidine/putrescine transport system substrate-binding protein D LAR_1535 spermidine/putrescine ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein D LAR_1536 spermidine/putrescine ABC transporter permease component K11071 potB; spermidine/putrescine transport system permease protein D LAR_1537 spermidine/putrescine ABC transporter ATP-binding component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D LAR_0175 glycine betaine/choline ABC transporter substrate bindingcomponent K05845 opuC; osmoprotectant transport system substrate-binding protein D LAR_0176 glycine betaine/choline ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein D LAR_0178 glycine betaine/choline ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein D LAR_0177 glycine betaine/choline ABC transporter ATP-binding component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D LAR_1474 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D LAR_1473 phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D LAR_1472 phosphate ABC transporter permease component K02038 pstA; phosphate transport system permease protein D LAR_1471 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LAR_0092 glutamine ABC transporter substrate binding and permease components K10036 glnH; glutamine transport system substrate-binding protein D LAR_0093 glutamine ABC transporter ATP-binding component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D LAR_1421 glutamine ABC transporter substrate binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D LAR_1423 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LAR_1422 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LAR_1420 glutamine ABC transporter ATP-binding component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D LAR_0284 ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D LAR_0282 ABC transporter permease component K10009 tcyB; L-cystine transport system permease protein D LAR_0283 ABC transporter ATP-binding component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D LAR_0698 amino acid ABC transporter substrate binding and permease components K17077 artQ; arginine/lysine/histidine transport system permease protein D LAR_0697 amino acid ABC transporter ATP-binding component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D LAR_1132 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D LAR_1485 ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D LAR_0184 conserved hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D LAR_0182 ABC transporter permease component K02072 metI; D-methionine transport system permease protein D LAR_0183 ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D LAR_0025 conserved hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D LAR_1702 ABC transporter substrate binding component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D LAR_1703 ABC transporter permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein D LAR_1704 ABC transporter ATP-binding component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D LAR_0503 glutamine ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LAR_0367 amino acid ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LAR_0501 glutamine ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D LAR_0502 glutamine ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D LAR_0956 iron(III) ABC transporter substrate binding component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D LAR_0954 iron(III) ABC transporter permease component K02015 ABC.FEV.P; iron complex transport system permease protein D LAR_0955 iron(III) ABC transporter ATP-binding component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D LAR_1596 cobalt ABC transporter permease component CbiN K02009 cbiN; cobalt/nickel transport protein D LAR_1595 cobalt ABC transporter permease component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D LAR_1597 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D LAR_1594 cobalt ABC transporter ATP-binding component CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D LAR_0704 putative biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component D LAR_1581 conserved hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D LAR_1364 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LAR_1552 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LAR_1366 cobalt ABC transporter ATP-binding component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LAR_1365 cobalt ABC transporter ATP-binding component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LAR_1551 cobalt ABC transporter ATP-binding component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LAR_1550 conserved hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D LAR_0207 zinc/iron ABC transporter substrate binding component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D LAR_0209 zinc/iron ABC transporter permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D LAR_0208 zinc/iron ABC transporter ATP-binding component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D LAR_1332 conserved hypothetical protein K11051 cylB; multidrug/hemolysin transport system permease protein D LAR_1331 ABC transporter ATP-binding component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D LAR_1675 ABC transporter permease and substrate binding components K19084 braE; bacitracin transport system permease protein D LAR_1674 ABC transporter ATP-binding component K19083 braD; bacitracin transport system ATP-binding protein D LAR_1195 ABC transporter permease component K25157 ecsB; ABC-2 type transport system permease protein D LAR_1196 ABC transporter ATP-binding component K25158 ecsA; ABC-2 type transport system ATP-binding protein D LAR_1562 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D LAR_1261 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LAR_1561 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LAR_1648 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LAR_1740 peptide ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D LAR_0036 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D LAR_1738 peptide ABC transporter permease and ATP-binding components K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LAR_0035 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LAR_1739 peptide ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LAR_0837 ABC transporter ATP-binding component K09013 sufC; Fe-S cluster assembly ATP-binding protein D LAR_1707 multidrug transport protein K26937 dinF; MATE family, multidrug efflux pump D LAR_1158 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D LAR_0401 fucose transport protein K02429 fucP; MFS transporter, FHS family, L-fucose permease D LAR_1501 oxalate-formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D LAR_1652 putative transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D LAR_0951 nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LAR_0186 multidrug transport protein K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein D LAR_1026 multidrug transport protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D LAR_1560 putative drug efflux protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D LAR_1250 multidrug transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D LAR_0349 transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D LAR_1231 multidrug transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D LAR_0893 multidrug transport protein K18936 mdeA; MFS transporter, DHA2 family, multidrug resistance protein D LAR_1746 putative transport protein K06902 UMF1; MFS transporter, UMF1 family D LAR_1747 putative transport protein K06902 UMF1; MFS transporter, UMF1 family D LAR_1532 putative transport protein K08368 yaaU; MFS transporter, putative metabolite transport protein D LAR_1255 phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LAR_0447 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LAR_1256 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D LAR_0225 PTS cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component D LAR_1559 PTS system galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D LAR_1640 glycerol uptake facilitator protein PduF K02440 glpF; glycerol uptake facilitator D LAR_0828 conserved hypothetical protein K10716 kch; voltage-gated potassium channel D LAR_1328 ammonium transport protein K03320 amt; ammonium transporter, Amt family D LAR_0306 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D LAR_0532 conserved hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D LAR_1711 magnesium transport protein K03284 corA; magnesium transporter D LAR_1649 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LAR_0895 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LAR_0800 hypothetical protein K21449 ata; trimeric autotransporter adhesin D LAR_1051 hypothetical phage protein K21449 ata; trimeric autotransporter adhesin D LAR_0851 conserved hypothetical protein K05338 lrgA; holin-like protein D LAR_1637 propanediol utilization protein PduA K27260 pduA; bacterial microcompartment shell protein D LAR_1655 sugar transport protein K16209 lacS; lactose/raffinose/galactose permease D LAR_1033 lactose transport protein K16209 lacS; lactose/raffinose/galactose permease D LAR_0051 sugar transport protein K16211 malY; maltose/moltooligosaccharide transporter D LAR_0079 sugar transport protein K16211 malY; maltose/moltooligosaccharide transporter D LAR_0082 sugar transport protein K16211 malY; maltose/moltooligosaccharide transporter D LAR_1508 putative sugar transport protein K16211 malY; maltose/moltooligosaccharide transporter D LAR_1410 lysine transport protein K11733 lysP; lysine-specific permease D LAR_0992 amino acid transport protein K16235 mmuP; S-methylmethionine transporter D LAR_1302 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LAR_1718 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LAR_0438 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LAR_0437 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LAR_1416 cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D LAR_0413 sugar transport protein K05340 glcU; glucose uptake protein D LAR_0030 putative sugar uptake protein K05340 glcU; glucose uptake protein D LAR_0765 gluconate transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D LAR_0600 putative gluconate transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D LAR_1658 proton/sodium-glutamate symport protein K11102 gltP; proton glutamate symport protein D LAR_1714 Na-H antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D LAR_0159 Na-H antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D LAR_1553 Na-H antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D LAR_0428 Na-H antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D LAR_0190 Na-H antiporter K26730 napA; Na+:H+ antiporter D LAR_1464 potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D LAR_1463 potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D LAR_0450 uracil transport protein K02824 uraA; uracil permease D LAR_1713 xanthine-uracil transport protein K16169 pbuX; xanthine permease D LAR_0485 putative transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease D LAR_0095 nucleoside transport protein K16323 yxjA; purine nucleoside transport protein D LAR_0387 chloride channel protein K03281 clcA; chloride channel protein, CIC family D LAR_0971 conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family D LAR_0180 conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family D LAR_0057 conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family D LAR_1743 manganese transport protein K03322 mntH; manganese transport protein D LAR_1461 cation transport protein K03322 mntH; manganese transport protein D LAR_1794 putative transport protein K24180 mleP; malate permease and related proteins D LAR_1806 conserved hypothetical protein K26605 azlC; branched chain amino acid efflux pump D LAR_0113 branched-chain amino acid transport protein K26605 azlC; branched chain amino acid efflux pump D LAR_0114 conserved hypothetical protein K26606 azlD; branched chain amino acid efflux pump D LAR_1418 conserved hypothetical protein K22736 VIT; vacuolar iron transporter family protein D LAR_1417 conserved hypothetical protein K22736 VIT; vacuolar iron transporter family protein D LAR_0615 cell division protein K03588 ftsW; cell division protein FtsW D LAR_0939 nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LAR_0938 nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LAR_0936 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LAR_1670 conserved hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter D LAR_0836 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D LAR_1803 conserved hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:lrf02044] D LAR_0620 DNA internalization-related competence protein ComEA K02237 comEA; competence protein ComEA D LAR_0621 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D LAR_0622 DNA internalization-related competence protein ComEC K02238 comEC; competence protein ComEC D LAR_0351 competence protein K02240 comFA; competence protein ComFA D LAR_0352 competence protein K02242 comFC; competence protein ComFC D LAR_0539 competence protein K02243 comGA; competence protein ComGA D LAR_0540 conserved hypothetical protein K02244 comGB; competence protein ComGB D LAR_0541 conserved hypothetical protein K02245 comGC; competence protein ComGC D LAR_1399 putative prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LAR_0354 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LAR_0295 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LAR_1374 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY D LAR_1088 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LAR_1090 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D LAR_0516 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D LAR_1818 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LAR_1156 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:lrf02042] D LAR_1649 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LAR_0895 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LAR_0741 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:lrf02022] D LAR_1475 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D LAR_0019 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LAR_0018 two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D LAR_1673 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D LAR_1672 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D LAR_1160 two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LAR_1161 two-component response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D LAR_0411 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D LAR_0946 two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D LAR_0844 hypothetical phage protein K07696 nreC; two-component system, NarL family, response regulator NreC D LAR_0947 two component response regulator K07696 nreC; two-component system, NarL family, response regulator NreC D LAR_0849 two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D LAR_0850 two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT D LAR_0418 two-component response regulator K07719 glnL; two-component system, response regulator GlnL D LAR_1638 transcriptional regulator PocR K07720 yesN; two-component system, response regulator YesN C 02035 Bacterial motility proteins [BR:lrf02035] D LAR_0284 ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:lrf04812] D LAR_0498 cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LAR_0460 cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LAR_0574 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LAR_0573 cell division protein FtsA K03590 ftsA; cell division protein FtsA D LAR_0100 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D LAR_0099 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LAR_0101 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:lrf04147] D LAR_0384 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LAR_0381 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LAR_0382 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LAR_0722 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LAR_0343 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LAR_0679 heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LAR_0415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LAR_0110 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LAR_0628 elongation factor Tu K02358 tuf; elongation factor Tu D LAR_1197 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LAR_0688 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0185 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1206 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0853 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1785 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_1313 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LAR_0050 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LAR_1373 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LAR_0703 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LAR_0702 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LAR_1662 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LAR_1012 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D LAR_1135 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LAR_1589 delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D LAR_0138 phosphoribosylaminoimidazolecarboxamide/formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LAR_0611 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LAR_1653 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LAR_0383 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0162 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0228 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LAR_0140 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LAR_0279 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:lrf02048] D LAR_0334 gamma-glutamyl phosphate reductase K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D LAR_0819 type I restriction-modification system restriction subnit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D LAR_1343 type I restriction-modification system R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D LAR_0818 conserved hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D LAR_1346 type I restriction-modification system S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D LAR_1344 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D LAR_0816 type I restriction system DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D LAR_1347 type I restriction-modification system M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D LAR_0542 putative modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D LAR_0193 hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D LAR_1065 hypothetical phage protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D LAR_0246 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D LAR_1227 hypothetical protein K18843 hicB; antitoxin HicB D LAR_0356 putative stress-responsive transcription regulator K03973 pspC; phage shock protein C D LAR_0820 conserved hypothetical protein K21498 higA-1; antitoxin HigA-1 D LAR_0574 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LAR_0498 cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LAR_0460 cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LAR_0753 topoisomerase IV A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LAR_0752 topoisomerase IV B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LAR_0583 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LAR_0488 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:lrf04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:lrf04090] C 01504 Antimicrobial resistance genes [BR:lrf01504] D LAR_1567 elongation factor G K18220 tetM; ribosomal protection tetracycline resistance protein D LAR_1451 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LAR_0243 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LAR_0242 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export D LAR_0241 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LAR_0240 D-alanyl transfer protein DltD K03740 dltD; D-alanine transfer protein D LAR_1431 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D LAR_0017 multidrug ABC transporter ATP-binding and permease components K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LAR_0016 conserved hypothetical protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lrf00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:lrf03100] D LAR_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LAR_tRNA19 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA40 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA35 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA33 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA42 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA61 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LAR_tRNA06 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LAR_tRNA08 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LAR_tRNA25 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LAR_tRNA32 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LAR_tRNA36 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LAR_tRNA49 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LAR_tRNA12 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LAR_tRNA10 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LAR_tRNA60 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LAR_tRNA13 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA53 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA58 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA43 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA30 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LAR_tRNA27 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA57 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA17 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA39 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA54 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA52 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LAR_tRNA04 tRNA-His K14226 tRNA-His; tRNA His D LAR_tRNA48 tRNA-His K14226 tRNA-His; tRNA His D LAR_tRNA01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LAR_tRNA28 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LAR_tRNA18 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA55 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA50 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA51 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA38 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LAR_tRNA62 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LAR_tRNA63 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LAR_tRNA15 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LAR_tRNA21 tRNA-Met K14230 tRNA-Met; tRNA Met D LAR_tRNA24 tRNA-Met K14230 tRNA-Met; tRNA Met D LAR_tRNA31 tRNA-Met K14230 tRNA-Met; tRNA Met D LAR_tRNA22 tRNA-Met K14230 tRNA-Met; tRNA Met D LAR_tRNA26 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LAR_tRNA45 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LAR_tRNA20 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LAR_tRNA56 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LAR_tRNA34 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LAR_tRNA41 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LAR_tRNA23 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LAR_tRNA29 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LAR_tRNA07 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LAR_tRNA05 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LAR_tRNA03 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LAR_tRNA16 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LAR_tRNA47 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LAR_tRNA09 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LAR_tRNA46 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LAR_tRNA37 tRNA-Val K14237 tRNA-Val; tRNA Val D LAR_tRNA59 tRNA-Val K14237 tRNA-Val; tRNA Val D LAR_tRNA44 tRNA-Val K14237 tRNA-Val; tRNA Val D LAR_tRNA14 tRNA-Val K14237 tRNA-Val; tRNA Val D LAR_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA05 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_16SrRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LAR_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA06 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_23SrRNA04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LAR_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA05 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LAR_5SrRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D LAR_1780 aldo-keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D LAR_1189 putative oxidoreductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-] D LAR_1558 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D LAR_1131 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D LAR_0179 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D LAR_1019 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D LAR_1456 conserved hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D LAR_1546 thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D LAR_1248 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D LAR_0123 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D LAR_0872 conserved hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D LAR_0414 galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D LAR_0471 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D LAR_0911 conserved hypothetical protein K08728 E2.4.2.6; nucleoside deoxyribosyltransferase [EC:2.4.2.6] D LAR_0359 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D LAR_0087 putative thiamin biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D LAR_1096 conserved hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D LAR_0088 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_0222 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_0239 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_0885 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_0484 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_0907 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_0957 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_1191 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_1341 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_1270 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_0661 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_1036 reverse transcriptase/maturase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LAR_0402 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D LAR_0358 HPr-P(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D LAR_0482 conserved hypothetical protein K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D LAR_0388 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D LAR_1801 putative penicillin-binding protein class C K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103] D LAR_1680 conserved hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D LAR_1664 putative protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LAR_0988 exopolysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LAR_1619 conserved hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LAR_1172 hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D LAR_0010 conserved hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D LAR_0202 DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LAR_0203 conserved hypothetical protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D LAR_1264 conserved hypothetical protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D LAR_1726 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D LAR_1322 putative autolysin K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LAR_0809 pantothenate metabolism flavoprotein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LAR_1041 hypothetical phage protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LAR_0607 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LAR_1157 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LAR_0160 conserved hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D LAR_1465 conserved hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53] D LAR_1225 conserved hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D LAR_1729 putative sugar kinase K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6] D LAR_1812 conserved hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] C 99981 Carbohydrate metabolism D LAR_0364 oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE D LAR_0363 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D LAR_0362 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG D LAR_1632 propanediol dehydratase reactivation protein PduG K27264 pduG; propanediol dehydratase-reactivating factor large subunit D LAR_1631 propanediol dehydratase reactivation protein PduH K27265 pduH; propanediol dehydratase-reactivating factor small subunit C 99982 Energy metabolism D LAR_0840 nitrogen fixation protein K04488 iscU; nitrogen fixation protein NifU and related proteins D LAR_0167 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D LAR_0879 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit D LAR_0742 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D LAR_1650 ribonucleotide reductase protein K03647 nrdI; protein involved in ribonucleotide reduction D LAR_0871 ribonucleotide reductase-like protein K03647 nrdI; protein involved in ribonucleotide reduction D LAR_0905 putative DNA-entry nuclease K15051 endA; DNA-entry nuclease C 99985 Amino acid metabolism D LAR_1639 ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ D LAR_1616 propanediol utilization protein PduV K04029 eutP; ethanolamine utilization protein EutP D LAR_1620 propanediol utilization protein PduU K04031 eutS; ethanolamine utilization protein EutS D LAR_1121 conserved hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D LAR_1252 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D LAR_0725 conserved hypothetical protein K02859 ribT; riboflavin biosynthesis RibT protein D LAR_0896 conserved hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein D LAR_0943 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D LAR_1614 conserved hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D LAR_0579 cold shock protein K03704 cspA; cold shock protein D LAR_1414 cold shock protein K03704 cspA; cold shock protein D LAR_1077 putative phage antirepressor K07741 antB; anti-repressor protein D LAR_0772 putative phage antirepressor K07741 antB; anti-repressor protein D LAR_0551 conserved hypothetical protein K16509 spxA; regulatory protein spx D LAR_0274 transcription accessory protein K06959 tex; protein Tex C 99974 Translation D LAR_0254 conserved hypothetical protein K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D LAR_0629 trigger factor K03545 tig; trigger factor D LAR_0390 SsrA-binding protein K03664 smpB; SsrA-binding protein D LAR_0313 putative glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D LAR_0039 conserved hypothetical protein K07397 yhfA; putative redox protein D LAR_0552 competence negative regulator K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D LAR_0497 putative DNA repair protein K03630 radC; DNA repair protein RadC D LAR_0999 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D LAR_0655 conserved hypothetical protein K07461 K07461; putative endonuclease D LAR_0748 DNA processing protein K04096 smf; DNA processing protein D LAR_0865 DNA replication protein DnaD K02086 dnaD; DNA replication protein D LAR_0786 putative phage terminase K06909 xtmB; phage terminase large subunit D LAR_0475 conserved hypothetical protein K07478 ycaJ; putative ATPase D LAR_0641 phage DNA primase K06919 K06919; putative DNA primase/helicase D LAR_0146 transposase K07482 K07482; transposase, IS30 family D LAR_0236 conserved hypothetical protein K07482 K07482; transposase, IS30 family D LAR_0994 transposase K07482 K07482; transposase, IS30 family D LAR_1266 transposase K07482 K07482; transposase, IS30 family D LAR_0756 transposase K07482 K07482; transposase, IS30 family D LAR_1796 transposase K07482 K07482; transposase, IS30 family D LAR_1612 transposase K07482 K07482; transposase, IS30 family D LAR_1267 putative transposase K07483 K07483; transposase D LAR_1016 putative transposase K07483 K07483; transposase D LAR_0931 putative transposase K07483 K07483; transposase D LAR_0964 transposase K07484 K07484; transposase D LAR_0144 transposase K07484 K07484; transposase D LAR_0975 transposase K07484 K07484; transposase D LAR_0560 transposase K07484 K07484; transposase D LAR_0262 transposase K07484 K07484; transposase D LAR_0145 putative transposase K07484 K07484; transposase D LAR_0263 putative transposase K07484 K07484; transposase D LAR_0965 hypothetical protein K07484 K07484; transposase D LAR_0976 conserved hypothetical protein K07484 K07484; transposase D LAR_0549 transposase K07485 K07485; transposase D LAR_1491 transposase K07485 K07485; transposase D LAR_0070 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1570 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0059 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0217 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1008 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1516 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1774 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1409 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1285 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1271 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1067 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1040 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0959 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0696 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0662 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0483 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0238 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0417 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_0913 transposase K07491 rayT; REP-associated tyrosine transposase D LAR_1515 transposase K07496 K07496; putative transposase D LAR_1007 transposase K07496 K07496; putative transposase D LAR_0218 transposase K07496 K07496; putative transposase D LAR_1571 transposase K07496 K07496; putative transposase D LAR_0069 transposase K07496 K07496; putative transposase D LAR_0329 putative transposase K07497 K07497; putative transposase D LAR_1017 putative transposase K07497 K07497; putative transposase D LAR_1490 transposase K07497 K07497; putative transposase D LAR_1545 zinc/iron ABC transporter ATP-binding component K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D LAR_0316 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D LAR_0386 conserved hypothetical protein K03293 TC.AAT; amino acid transporter, AAT family D LAR_0904 conserved hypothetical protein K03293 TC.AAT; amino acid transporter, AAT family D LAR_0094 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D LAR_1233 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D LAR_1083 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LAR_0188 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LAR_1749 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LAR_0374 conserved hypothetical protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LAR_1531 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LAR_0265 di-/tripeptide transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D LAR_1696 branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D LAR_1569 branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D LAR_0151 putative purine-cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D LAR_0247 cytosine transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D LAR_1438 2-oxoglutarate/malate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D LAR_0269 putative transport protein K07085 K07085; putative transport protein C 99978 Cell growth D LAR_1817 conserved hypothetical protein K06346 jag; spoIIIJ-associated protein D LAR_0766 phage integrase K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D LAR_0614 GTP-binding protein K06207 typA; GTP-binding protein D LAR_0887 conserved hypothetical protein K07166 K07166; ACT domain-containing protein D LAR_0706 phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D LAR_0034 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein D LAR_1636 propanediol utilization protein PduB K27263 pduB; bacterial microcompartment shell protein D LAR_1629 propanediol utilization protein PduJ K27266 pduJ; bacterial microcompartment shell protein D LAR_1630 propanediol utilization protein PduK K27267 pduK; bacterial microcompartment shell protein D LAR_1627 propanediol utilization protein PduM K27268 pduM; bacterial microcompartment assembly protein D LAR_1626 propanediol utilization protein PduN K27269 pduN; bacterial microcompartment shell vertex protein C 99994 Others D LAR_1470 phosphate uptake regulator K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D LAR_1316 putative acetyltransferase K02348 elaA; ElaA protein D LAR_1756 putative acetyltransferase K02348 elaA; ElaA protein D LAR_0553 competence protein K06198 coiA; competence protein CoiA D LAR_1185 conserved hypothetical protein K06878 K06878; tRNA-binding protein D LAR_0841 conserved hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB D LAR_0838 conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D LAR_1300 conserved hypothetical protein K07058 K07058; membrane protein D LAR_1651 conserved hypothetical protein K04750 phnB; PhnB protein D LAR_0232 conserved hypothetical protein K03744 lemA; LemA protein D LAR_0275 conserved hypothetical protein K03095 sprL; SprT-like protein D LAR_0548 conserved hypothetical protein K03975 dedA; membrane-associated protein D LAR_1518 conserved hypothetical protein K03975 dedA; membrane-associated protein D LAR_1524 conserved hypothetical protein K01421 yhgE; putative membrane protein D LAR_0357 conserved hypothetical protein K08972 K08972; putative membrane protein D LAR_1554 conserved hypothetical protein K08987 K08987; putative membrane protein D LAR_0858 conserved hypothetical protein K08996 yagU; putative membrane protein D LAR_0161 conserved hypothetical protein K13256 psiE; protein PsiE C 99997 Function unknown D LAR_0215 conserved hypothetical protein K06885 K06885; uncharacterized protein D LAR_1572 conserved hypothetical protein K06889 K06889; uncharacterized protein D LAR_1407 conserved hypothetical protein K06889 K06889; uncharacterized protein D LAR_1555 conserved hypothetical protein K06889 K06889; uncharacterized protein D LAR_1317 conserved hypothetical protein K06890 K06890; uncharacterized protein D LAR_1183 conserved hypothetical protein K06890 K06890; uncharacterized protein D LAR_0881 conserved hypothetical protein K06950 K06950; uncharacterized protein D LAR_1153 conserved hypothetical protein K06950 K06950; uncharacterized protein D LAR_1086 conserved hypothetical protein K06960 K06960; uncharacterized protein D LAR_0287 hypothetical protein K06975 K06975; uncharacterized protein D LAR_1484 conserved hypothetical protein K07035 K07035; uncharacterized protein D LAR_1759 conserved hypothetical protein K07078 K07078; uncharacterized protein D LAR_1549 transport protein K07090 K07090; uncharacterized protein D LAR_0529 putative phosphoesterase K07095 K07095; uncharacterized protein D LAR_1694 conserved hypothetical protein K07097 K07097; uncharacterized protein D LAR_0157 conserved hypothetical protein K07118 K07118; uncharacterized protein D LAR_0637 oxidoreductase K07124 K07124; uncharacterized protein D LAR_1511 conserved hypothetical protein K07133 K07133; uncharacterized protein D LAR_1488 conserved hypothetical protein K07149 K07149; uncharacterized protein D LAR_0700 conserved hypothetical protein K09117 K09117; uncharacterized protein D LAR_0886 conserved hypothetical protein K09157 K09157; uncharacterized protein D LAR_0901 conserved hypothetical protein K09384 K09384; uncharacterized protein D LAR_1089 conserved hypothetical protein K09787 K09787; uncharacterized protein D LAR_0723 conserved hypothetical protein K00243 K00243; uncharacterized protein D LAR_0480 conserved hypothetical protein K09861 K09861; uncharacterized protein D LAR_0652 conserved hypothetical protein K09976 K09976; uncharacterized protein D LAR_1123 conserved hypothetical protein K07584 ysxB; uncharacterized protein D LAR_0670 conserved hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 1, 2024