+D GENES KO #

  KEGG Orthology (KO) - Limosilactobacillus reuteri I5007

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:lrt00010] D LRI_0764 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LRI_1494 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LRI_1719 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LRI_1791 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1720 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1545 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1547 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LRI_1546 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LRI_1811 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1648 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1544 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LRI_1158 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LRI_1721 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LRI_1275 pyruvate dehydrogenase complex E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D LRI_1274 pyruvate dehydrogenase complex E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D LRI_1273 pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_0585 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0436 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0694 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1062 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1194 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1766 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1617 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LRI_0478 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_0429 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_2020 alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_0424 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LRI_1560 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:lrt00020] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_0434 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LRI_1275 pyruvate dehydrogenase complex E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D LRI_1274 pyruvate dehydrogenase complex E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D LRI_1273 pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:lrt00030] D LRI_1494 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LRI_0284 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LRI_1333 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D LRI_0283 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LRI_0805 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LRI_1641 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D LRI_0307 xylulose 5-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D LRI_1848 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D LRI_0681 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D LRI_1528 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D LRI_1847 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D LRI_1780 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D LRI_1560 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LRI_1301 phosphoribosyl pyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LRI_1734 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LRI_1112 carbohydrate kinase FGGY K25031 gntK; gluconokinase [EC:2.7.1.12] D LRI_1115 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12] D LRI_1719 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00040 Pentose and glucuronate interconversions [PATH:lrt00040] D LRI_1568 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LRI_0805 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LRI_1435 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D LRI_1490 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] C 00051 Fructose and mannose metabolism [PATH:lrt00051] D LRI_1061 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LRI_1719 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LRI_1791 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1720 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1545 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:lrt00052] D LRI_0424 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LRI_0268 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LRI_0269 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D LRI_0877 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LRI_1599 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LRI_1568 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LRI_1560 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LRI_0764 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LRI_1651 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LRI_1650 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LRI_1682 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LRI_0609 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LRI_1059 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D LRI_0318 PTS system galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D LRI_0935 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D LRI_0091 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:lrt00500] D LRI_0935 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D LRI_0973 inulosucrase K20811 inuJ; inulosucrase [EC:2.4.1.9] D LRI_0418 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D LRI_1568 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LRI_1724 PTS cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component D LRI_0091 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D LRI_0064 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8] D LRI_0065 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D LRI_1560 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LRI_0764 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LRI_1494 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LRI_1061 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lrt00520] D LRI_1061 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LRI_1522 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LRI_1523 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D LRI_1735 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LRI_1449 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LRI_1726 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LRI_1529 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LRI_0590 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LRI_1626 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LRI_0764 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LRI_1560 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LRI_1568 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LRI_0268 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LRI_0269 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D LRI_0877 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LRI_1599 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LRI_0609 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LRI_1494 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00620 Pyruvate metabolism [PATH:lrt00620] D LRI_1275 pyruvate dehydrogenase complex E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D LRI_1274 pyruvate dehydrogenase complex E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D LRI_1273 pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_1617 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LRI_0478 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_0429 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_2020 alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_1356 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LRI_1534 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LRI_1158 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LRI_0987 acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LRI_0983 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LRI_0985 biotin/pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LRI_0986 acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LRI_0748 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D LRI_0585 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0436 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0694 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1062 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1194 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1766 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0051 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LRI_0301 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LRI_0357 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LRI_1225 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LRI_1426 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D LRI_0439 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D LRI_0434 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LRI_0433 malolactic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101] D LRI_1721 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lrt00630] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LRI_0768 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LRI_1463 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_1284 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LRI_1421 oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] C 00640 Propanoate metabolism [PATH:lrt00640] D LRI_1356 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LRI_1534 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_0987 acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LRI_0983 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LRI_0985 biotin/pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LRI_0986 acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LRI_0585 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0436 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0694 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1062 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1194 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1766 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0197 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D LRI_0034 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] C 00650 Butanoate metabolism [PATH:lrt00650] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LRI_1856 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LRI_1617 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LRI_1231 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D LRI_1825 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LRI_1824 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D LRI_0525 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D LRI_1800 short-chain dehydrogenase/reductase SDR K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:lrt00660] D LRI_1825 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LRI_1824 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00562 Inositol phosphate metabolism [PATH:lrt00562] D LRI_1270 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LRI_1791 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1720 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1545 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:lrt00190] D LRI_1408 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D LRI_1412 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LRI_1411 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LRI_1453 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LRI_1451 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LRI_1452 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LRI_1454 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LRI_1450 atpC; ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LRI_1457 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LRI_1455 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LRI_1456 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LRI_1124 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D LRI_1601 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:lrt00680] D LRI_1463 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LRI_1544 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LRI_1719 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LRI_1356 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LRI_1534 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LRI_1721 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LRI_1811 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1648 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1196 malate dehydrogenase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337] C 00910 Nitrogen metabolism [PATH:lrt00910] D LRI_0952 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LRI_0965 respiratory membrane bound nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LRI_0966 respiratory membrane bound nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LRI_0968 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LRI_0768 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LRI_1487 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:lrt00920] D LRI_1385 exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D LRI_0252 homoserine O-succinyltransferase K23304 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LRI_0251 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D LRI_0408 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:lrt00061] D LRI_0987 acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LRI_0983 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LRI_0985 biotin/pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LRI_0986 acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LRI_0979 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D LRI_0812 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D LRI_0980 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LRI_0978 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LRI_0982 3-oxoacyl-[acyl-carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LRI_0003 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LRI_0981 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LRI_0976 beta-hydroxyacyl-(ACP) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LRI_0984 fabZ; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LRI_0988 enoyl-[acyl-carrier protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation [PATH:lrt00062] D LRI_1856 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00071 Fatty acid degradation [PATH:lrt00071] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LRI_1856 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LRI_1617 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LRI_0478 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_0429 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_2020 alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:lrt00121] D LRI_1179 conjugated bile salt hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:lrt00561] D LRI_1284 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LRI_0197 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D LRI_0866 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D LRI_0811 glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LRI_1128 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LRI_1227 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LRI_0535 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LRI_0644 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LRI_1627 glycosyltransferase K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D LRI_0366 phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LRI_0198 alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LRI_1059 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D LRI_0034 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] C 00564 Glycerophospholipid metabolism [PATH:lrt00564] D LRI_1569 gpsA; Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D LRI_1128 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LRI_1227 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LRI_0535 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LRI_0076 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D LRI_1219 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D LRI_1396 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D LRI_0057 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D LRI_0247 cardiolipinsynthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:lrt00600] D LRI_1651 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LRI_1650 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LRI_1682 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LRI_1059 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:lrt00230] D LRI_1310 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LRI_1847 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D LRI_1780 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D LRI_1560 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LRI_1301 phosphoribosyl pyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LRI_1734 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LRI_1816 phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D LRI_1812 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D LRI_1814 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D LRI_1817 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D LRI_1819 phosphoribosylformylglycinamidine synthase PurS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D LRI_1818 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D LRI_1815 phosphoribosylaminoimidazole synthase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D LRI_0528 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D LRI_1822 phosphoribosylaminoimidazole carboxylase II K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D LRI_1823 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D LRI_1820 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D LRI_1821 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LRI_1813 purH; phosphoribosylaminoimidazolecarboxamide/formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LRI_1234 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D LRI_1845 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D LRI_1867 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LRI_1690 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LRI_1843 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LRI_1754 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LRI_1374 xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D LRI_0690 xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D LRI_0527 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D LRI_0349 NUDIX hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D LRI_0369 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LRI_0079 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D LRI_0350 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LRI_0796 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LRI_1615 ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LRI_1616 nrdF; Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LRI_0650 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D LRI_1188 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LRI_1751 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D LRI_1600 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D LRI_1602 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D LRI_1340 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D LRI_0067 GTP-pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D LRI_0080 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LRI_0512 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LRI_1487 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:lrt00240] D LRI_0093 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LRI_1036 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LRI_0094 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LRI_1037 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LRI_1835 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LRI_1834 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D LRI_1833 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D LRI_1831 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D LRI_1832 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D LRI_1222 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D LRI_1754 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LRI_0349 NUDIX hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D LRI_1727 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D LRI_1147 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D LRI_0755 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D LRI_1462 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D LRI_0082 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D LRI_1093 rihA; cytidine/uridine-specific hydrolase K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D LRI_1846 pyrimidine nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D LRI_1699 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D LRI_0650 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D LRI_1615 ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LRI_1616 nrdF; Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LRI_1262 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D LRI_1608 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D LRI_1639 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LRI_1467 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D LRI_1140 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LRI_0657 glutamate synthase subunit beta K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D LRI_0658 dihydroorotate dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:lrt00250] D LRI_1656 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D LRI_0128 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LRI_0146 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D LRI_1885 asparagine synthase 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D LRI_1592 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D LRI_1177 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LRI_1176 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LRI_0080 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LRI_1821 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LRI_1835 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LRI_0768 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LRI_0093 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LRI_1036 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LRI_0094 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LRI_1037 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LRI_0713 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LRI_1709 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LRI_1818 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D LRI_1522 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LRI_1816 phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:lrt00260] D LRI_1295 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LRI_1288 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LRI_1463 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LRI_1284 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LRI_1811 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1648 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_0838 L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LRI_0839 L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00270 Cysteine and methionine metabolism [PATH:lrt00270] D LRI_0252 homoserine O-succinyltransferase K23304 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LRI_0251 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D LRI_0408 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D LRI_1646 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LRI_0916 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D LRI_0670 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D LRI_1308 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D LRI_1591 aminotransferase class I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D LRI_0378 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LRI_1295 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LRI_1288 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LRI_0584 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LRI_1910 glutamate-cysteine ligase/gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LRI_0585 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0436 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0694 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1062 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1194 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1766 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0838 L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LRI_0839 L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:lrt00280] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_1856 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LRI_1231 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lrt00290] D LRI_1825 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00300 Lysine biosynthesis [PATH:lrt00300] D LRI_1295 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LRI_1288 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LRI_1291 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LRI_1290 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D LRI_1770 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LRI_1563 peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LRI_0416 M20/M25/M40 family peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LRI_1296 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LRI_1294 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D LRI_1293 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89] D LRI_0052 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LRI_1289 aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LRI_1164 amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LRI_0770 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LRI_1292 amino acid amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D LRI_1629 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D LRI_1714 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:lrt00310] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_1856 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:lrt00220] D LRI_1488 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D LRI_1177 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LRI_1176 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LRI_1473 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D LRI_0713 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LRI_1709 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LRI_1818 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D LRI_0768 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LRI_1487 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00330 Arginine and proline metabolism [PATH:lrt00330] D LRI_1699 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D LRI_1107 cell wall anchor domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LRI_0037 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D LRI_1595 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D LRI_1593 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D LRI_0340 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism D LRI_1920 histidine decarboxylase, pyruvoyl type K01590 hdc; histidine decarboxylase [EC:4.1.1.22] C 00350 Tyrosine metabolism [PATH:lrt00350] D LRI_1617 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LRI_0478 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_0429 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_2020 alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_1698 hydratase/decarboxylase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] C 00360 Phenylalanine metabolism D LRI_1107 cell wall anchor domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:lrt00380] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_1856 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LRI_1107 cell wall anchor domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D LRI_0657 glutamate synthase subunit beta K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D LRI_0658 dihydroorotate dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] C 00430 Taurine and hypotaurine metabolism [PATH:lrt00430] D LRI_1534 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LRI_1356 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:lrt00450] D LRI_1646 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LRI_1076 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D LRI_0841 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D LRI_1564 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D LRI_1745 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:lrt00460] D LRI_0128 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LRI_0146 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D LRI_1463 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:lrt00470] D LRI_1702 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LRI_1443 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LRI_1705 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LRI_1707 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LRI_0713 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LRI_1709 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LRI_1818 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D LRI_1375 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LRI_1321 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LRI_1656 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D LRI_1296 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LRI_1294 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:lrt00480] D LRI_0584 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LRI_1910 glutamate-cysteine ligase/gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LRI_0148 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LRI_0570 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D LRI_1930 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D LRI_0283 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LRI_0284 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:lrt00511] D LRI_1651 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LRI_1650 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LRI_1682 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lrt00541] D LRI_1568 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LRI_0877 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LRI_1599 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LRI_0609 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LRI_0624 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LRI_0626 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LRI_0890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LRI_0625 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LRI_0627 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D LRI_1735 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LRI_0590 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LRI_1626 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:lrt00550] D LRI_1449 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LRI_1726 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LRI_1529 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LRI_0719 murC; ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LRI_1321 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LRI_1443 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LRI_1714 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LRI_1171 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D LRI_1220 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LRI_1322 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LRI_1320 murG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LRI_1049 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LRI_0697 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LRI_1323 cell division protein FtsI/penicillin-binding protein 2 K08724 pbpB; penicillin-binding protein 2B D LRI_0760 penicillin-binding protein 2B K21465 pbpA; penicillin-binding protein A D LRI_0422 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LRI_1468 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D LRI_1469 glutamine amidotransferase domain-containing protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:lrt00552] D LRI_0088 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LRI_0089 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LRI_0710 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LRI_1705 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LRI_1707 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LRI_1706 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export D LRI_1708 D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein D LRI_0874 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D LRI_0630 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D LRI_0366 phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LRI_0198 alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LRI_0644 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LRI_0645 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:lrt00730] D LRI_0695 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LRI_0938 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LRI_1415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1307 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1414 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D LRI_1008 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LRI_0939 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D LRI_0937 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D LRI_0804 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LRI_0806 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D LRI_0512 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:lrt00740] D LRI_1829 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LRI_1090 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LRI_1092 riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LRI_1069 Cof-like hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D LRI_1089 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D LRI_1091 riboflavin synthase alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D LRI_1208 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D LRI_0400 nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D LRI_0939 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D LRI_1310 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:lrt00760] D LRI_0559 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D LRI_1654 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D LRI_1845 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D LRI_0735 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D LRI_1653 nadE; NAD synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D LRI_1748 transcription regulator K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D LRI_1339 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:lrt00770] D LRI_1825 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LRI_0165 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D LRI_1590 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D LRI_0367 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D LRI_0798 pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D LRI_1265 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D LRI_0724 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D LRI_1703 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D LRI_0657 glutamate synthase subunit beta K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D LRI_0658 dihydroorotate dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] C 00780 Biotin metabolism [PATH:lrt00780] D LRI_0982 3-oxoacyl-[acyl-carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LRI_0003 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LRI_0981 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LRI_0976 beta-hydroxyacyl-(ACP) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LRI_0984 fabZ; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LRI_0988 enoyl-[acyl-carrier protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D LRI_1174 biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:lrt00785] D LRI_1730 lipoate--protein ligase A K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204] D LRI_0314 lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_1275 pyruvate dehydrogenase complex E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D LRI_1274 pyruvate dehydrogenase complex E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D LRI_1273 pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00790 Folate biosynthesis [PATH:lrt00790] D LRI_0686 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D LRI_0687 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D LRI_0691 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D LRI_1139 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LRI_0689 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D LRI_1407 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D LRI_1829 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LRI_1090 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LRI_1807 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D LRI_1805 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D LRI_0950 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D LRI_0963 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D LRI_0962 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D LRI_0960 molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:lrt00670] D LRI_1139 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LRI_1826 formyltetrahydrofolate synthase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D LRI_0788 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LRI_1463 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LRI_1814 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D LRI_1813 purH; phosphoribosylaminoimidazolecarboxamide/formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LRI_0800 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LRI_1140 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LRI_0761 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:lrt00860] D LRI_0407 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lrt00130] D LRI_0832 ubiE; menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D LRI_0405 methyltransferase domain-containing protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D LRI_1082 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D LRI_1083 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D LRI_1084 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D LRI_0831 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D LRI_1778 nucleoside-diphosphate-sugar epimerase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:lrt00900] D LRI_1008 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LRI_1740 ipk; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LRI_1231 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D LRI_1750 hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D LRI_1054 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D LRI_1056 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D LRI_1055 mevalonate diphosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D LRI_1057 isopentenyl diphosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D LRI_0791 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D LRI_1220 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation D LRI_1856 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:lrt00523] D LRI_0624 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LRI_0626 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LRI_0890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LRI_0625 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LRI_0627 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:lrt01054] D LRI_1656 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D LRI_0626 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LRI_0890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D LRI_0419 penicillin-binding protein transpeptidase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis D LRI_1593 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] C 00261 Monobactam biosynthesis [PATH:lrt00261] D LRI_1295 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LRI_1288 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LRI_1291 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LRI_1290 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:lrt00521] D LRI_0764 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D LRI_1560 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LRI_1270 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LRI_0624 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LRI_0626 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LRI_0890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LRI_0625 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LRI_0627 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D LRI_0764 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:lrt00525] D LRI_0624 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LRI_0626 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LRI_0890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D LRI_0980 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LRI_0003 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LRI_0981 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LRI_0988 enoyl-[acyl-carrier protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D LRI_0979 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D LRI_0812 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D LRI_0670 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:lrt00362] D LRI_0865 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LRI_0114 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:lrt00627] D LRI_1107 cell wall anchor domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LRI_0748 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:lrt00625] D LRI_0478 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_0429 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_2020 alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_1617 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D LRI_0865 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:lrt00643] D LRI_1107 cell wall anchor domain-containing protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation D LRI_1856 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00363 Bisphenol degradation C 00621 Dioxin degradation D LRI_0865 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:lrt00626] D LRI_0478 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_0429 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_2020 alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LRI_1617 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:lrt03020] D LRI_0482 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LRI_0483 DNA-directed RNA polymerase beta-prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LRI_0517 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LRI_0797 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LRI_1728 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:lrt03010] D LRI_1146 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LRI_1224 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LRI_0497 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LRI_1417 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LRI_0508 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LRI_0009 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LRI_0487 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LRI_0505 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LRI_0524 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LRI_0490 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LRI_0516 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LRI_0486 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LRI_0515 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LRI_0504 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LRI_0835 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LRI_1258 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LRI_0818 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LRI_0500 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LRI_0011 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LRI_0495 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LRI_1259 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LRI_1182 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LRI_1630 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LRI_0494 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LRI_0491 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LRI_0492 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LRI_0503 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LRI_0506 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LRI_1624 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LRI_0013 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LRI_1625 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LRI_1631 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LRI_0523 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LRI_0501 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LRI_0510 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LRI_0498 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LRI_0518 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LRI_0507 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LRI_0823 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LRI_0730 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LRI_0780 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LRI_0496 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LRI_0493 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LRI_0502 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LRI_0782 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LRI_0807 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LRI_0499 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LRI_0509 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LRI_1725 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LRI_0741 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LRI_1891 rpmH; 50S ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D LRI_0729 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LRI_0514 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LRI_r0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:lrt00970] D LRI_t0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LRI_t0035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LRI_t0056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LRI_t0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0064 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LRI_t0066 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LRI_t0003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LRI_t0044 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LRI_t0037 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LRI_t0019 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LRI_t0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LRI_t0062 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LRI_t0059 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LRI_t0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0058 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0022 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0029 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0026 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0018 tRNA-His K14226 tRNA-His; tRNA His D LRI_t0068 tRNA-His K14226 tRNA-His; tRNA His D LRI_t0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LRI_t0041 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LRI_t0057 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LRI_t0036 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LRI_t0061 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LRI_t0002 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LRI_t0054 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LRI_t0038 tRNA-Met K14230 tRNA-Met; tRNA Met D LRI_t0045 tRNA-Met K14230 tRNA-Met; tRNA Met D LRI_t0047 tRNA-Met K14230 tRNA-Met; tRNA Met D LRI_t0048 tRNA-Met K14230 tRNA-Met; tRNA Met D LRI_t0015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LRI_t0043 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LRI_t0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LRI_t0028 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LRI_t0049 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LRI_t0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LRI_t0046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LRI_t0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LRI_t0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LRI_t0012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LRI_t0053 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LRI_t0067 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LRI_t0069 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LRI_t0065 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LRI_t0017 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LRI_t0063 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LRI_t0016 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LRI_t0004 tRNA-Val K14237 tRNA-Val; tRNA Val D LRI_t0014 tRNA-Val K14237 tRNA-Val; tRNA Val D LRI_t0031 tRNA-Val K14237 tRNA-Val; tRNA Val D LRI_t0055 tRNA-Val K14237 tRNA-Val; tRNA Val D LRI_0769 gltX; glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LRI_0533 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LRI_0534 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LRI_0532 gatC; glutamyl-tRNA amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LRI_1383 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LRI_1185 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LRI_0145 asnC; asparaginyl-tRNA synthase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LRI_1168 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LRI_1167 glyS; glycyl-tRNA synthase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LRI_0172 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LRI_1863 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LRI_1636 cysS; cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LRI_1745 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LRI_0800 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LRI_1413 valS; valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LRI_0671 leuS; leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LRI_1312 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LRI_1686 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LRI_0696 argS; arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LRI_1217 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LRI_0188 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LRI_1922 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LRI_0752 pheS; phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LRI_0753 pheT; phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LRI_1809 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LRI_1752 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:lrt03060] D LRI_0511 protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LRI_0851 secretory protein SecY K03076 secY; preprotein translocase subunit SecY D LRI_1633 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LRI_1540 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LRI_1386 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D LRI_1889 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_0747 membrane protein OxaA 2 K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_0855 preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LRI_1575 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LRI_0817 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LRI_0815 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D LRI_1882 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LRI_1039 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:lrt04122] D LRI_1415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1307 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1305 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LRI_0950 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D LRI_1807 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D LRI_0951 thiamine S protein K03636 moaD; sulfur-carrier protein D LRI_0964 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D LRI_1805 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D LRI_0963 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D LRI_1414 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:lrt03018] D LRI_1544 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LRI_1538 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LRI_1713 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LRI_1149 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LRI_1392 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D LRI_0458 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LRI_1257 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LRI_1200 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LRI_1586 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LRI_1601 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:lrt03030] D LRI_1530 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LRI_1159 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LRI_1216 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LRI_1612 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LRI_1606 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LRI_1260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LRI_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LRI_0014 replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LRI_2046 DnaB-like helicase C-terminal domain protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LRI_1166 DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D LRI_0010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LRI_1041 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LRI_1232 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LRI_1132 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LRI_0722 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LRI_0530 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:lrt03410] D LRI_1759 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LRI_1535 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LRI_0239 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D LRI_0723 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LRI_0669 3-methyladenine-DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LRI_0448 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LRI_0656 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LRI_0827 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LRI_0722 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LRI_1235 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LRI_0530 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:lrt03420] D LRI_1695 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LRI_1011 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LRI_1556 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LRI_1557 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LRI_1239 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D LRI_0529 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_0363 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_1755 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_0722 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LRI_0530 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:lrt03430] D LRI_1391 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LRI_1378 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D LRI_1390 mutL; DNA mismatch repair protein HexB K03572 mutL; DNA mismatch repair protein MutL D LRI_0529 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_0363 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_1755 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_0789 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LRI_0790 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LRI_1235 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LRI_0010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LRI_1159 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LRI_1216 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LRI_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LRI_1612 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LRI_1260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LRI_1606 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LRI_1530 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LRI_0530 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:lrt03440] D LRI_1235 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LRI_0010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LRI_0006 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D LRI_1169 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LRI_1610 recR; recombination protein RecR K06187 recR; recombination protein RecR D LRI_1394 recA; recA protein K03553 recA; recombination protein RecA D LRI_0722 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LRI_1389 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LRI_1388 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LRI_0810 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LRI_1302 exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LRI_1159 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LRI_1216 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LRI_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LRI_1612 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LRI_1260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LRI_1606 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LRI_1530 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LRI_0799 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:lrt02010] D LRI_0345 spermidine/putrescine ABC transporter substrate-binding component K11069 potD; spermidine/putrescine transport system substrate-binding protein D LRI_0344 ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein D LRI_0343 binding-protein-dependent transport system inner membrane protein K11071 potB; spermidine/putrescine transport system permease protein D LRI_0342 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D LRI_1776 glycine betaine/choline ABC transporter substrate bindingcomponent K05845 opuC; osmoprotectant transport system substrate-binding protein D LRI_1773 glycine betaine/choline ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein D LRI_1775 glycine betaine/choline ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein D LRI_1774 glycine betaine/choline ABC transporter ATP-binding component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D LRI_1527 ribose transport protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D LRI_0388 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D LRI_0389 phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D LRI_0390 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D LRI_0391 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LRI_1862 glutamine ABC transporter substrate binding and permease components K10036 glnH; glutamine transport system substrate-binding protein D LRI_1861 ABC transporter related protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D LRI_0462 glutamine ABC transporter substrate binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D LRI_0460 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LRI_0461 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LRI_0463 glutamine ABC transporter ATP-binding component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D LRI_1643 ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D LRI_1645 ABC transporter permease component K10009 tcyB; L-cystine transport system permease protein D LRI_1644 ABC transporter ATP-binding component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D LRI_1183 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D LRI_1184 ABC superfamily ATP binding cassette transporter, ABC protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D LRI_0379 ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D LRI_1767 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D LRI_0772 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D LRI_1769 binding-protein-dependent transport system inner membrane protein K02072 metI; D-methionine transport system permease protein D LRI_1768 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D LRI_1175 BioY protein K03523 bioY; biotin transport system substrate-specific component D LRI_0521 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LRI_0326 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LRI_0519 cobalt ABC transporter ATP-binding component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LRI_0520 cobalt ABC transporter ATP-binding component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LRI_0255 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein D LRI_0256 ABC transporter-like protein K19083 braD; bacitracin transport system ATP-binding protein D LRI_0022 ABC transporter-like protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LRI_0302 ABC transporter-like protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D LRI_0303 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D LRI_1409 cytochrome D ABC transporter ATP-binding and permease components K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D LRI_1410 cytochrome D ABC transporter ATP-binding and permease components K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D LRI_0412 ABC transporter related protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:lrt02060] D LRI_0643 phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LRI_1461 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LRI_0642 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D LRI_1724 PTS cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component D LRI_0318 PTS system galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component C 03070 Bacterial secretion system [PATH:lrt03070] D LRI_1633 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LRI_1540 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LRI_0511 protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LRI_0851 secretory protein SecY K03076 secY; preprotein translocase subunit SecY D LRI_1386 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D LRI_1889 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_0747 membrane protein OxaA 2 K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_0855 preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LRI_1575 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LRI_0815 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D LRI_0817 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:lrt02020] D LRI_0387 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D LRI_0388 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D LRI_0028 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D LRI_0024 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LRI_0023 two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D LRI_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LRI_0255 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein D LRI_0256 ABC transporter-like protein K19083 braD; bacitracin transport system ATP-binding protein D LRI_0257 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D LRI_0258 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D LRI_1705 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LRI_1706 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export D LRI_1707 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LRI_1708 D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein D LRI_0452 Lysyl-tRNA synthetase (class II) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D LRI_0743 two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LRI_0742 two component transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D LRI_0440 Citrate lyase synthetase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D LRI_0441 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D LRI_0442 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D LRI_0443 citrate (pro-3S)-lyase K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D LRI_0444 CitXG protein K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52] D LRI_0439 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D LRI_1066 two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D LRI_1065 two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT D LRI_1064 murein hydrolase regulator LrgA K05338 lrgA; holin-like protein D LRI_1063 holin protein LrgB K05339 lrgB; holin-like protein LrgB D LRI_0965 respiratory membrane bound nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LRI_0966 respiratory membrane bound nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LRI_0968 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LRI_0967 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D LRI_0958 two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D LRI_0956 two component response regulator K07696 nreC; two-component system, NarL family, response regulator NreC D LRI_1071 response regulator K07696 nreC; two-component system, NarL family, response regulator NreC D LRI_0768 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LRI_1489 two-component response regulator K07719 glnL; two-component system, response regulator GlnL D LRI_0713 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LRI_1709 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LRI_1412 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LRI_1411 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LRI_1717 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D LRI_0590 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LRI_1626 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:lrt02024] D LRI_0378 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LRI_1092 riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LRI_1889 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_0747 membrane protein OxaA 2 K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_1633 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LRI_1540 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LRI_0511 protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LRI_0851 secretory protein SecY K03076 secY; preprotein translocase subunit SecY D LRI_1386 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D LRI_0855 preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LRI_1575 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LRI_0815 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D LRI_0817 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:lrt02040] D LRI_1643 ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D LRI_1165 RNA polymerase sigma-43 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D LRI_1544 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:lrt01501] D LRI_0419 penicillin-binding protein transpeptidase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LRI_0022 ABC transporter-like protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LRI_1049 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LRI_0697 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:lrt01502] D LRI_1443 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LRI_1702 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LRI_1714 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LRI_1322 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LRI_1320 murG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lrt01503] D LRI_0028 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D LRI_1705 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LRI_1706 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export D LRI_1707 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LRI_1708 D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein D LRI_0452 Lysyl-tRNA synthetase (class II) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:lrt01000] C 01001 Protein kinases [BR:lrt01001] D LRI_0803 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D LRI_0876 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D LRI_0024 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LRI_0257 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D LRI_0743 two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LRI_0958 two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D LRI_1066 two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:lrt01009] D LRI_0802 protein kinase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:lrt01002] D LRI_1039 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D LRI_1642 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LRI_0150 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LRI_0369 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LRI_0073 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D LRI_0220 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LRI_1281 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LRI_1816 phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D LRI_1522 glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LRI_1885 asparagine synthase 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D LRI_0451 transcriptional regulator K03152 thiJ; protein deglycase [EC:3.5.1.124] D LRI_1179 conjugated bile salt hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D LRI_1722 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D LRI_0207 peptidase U34 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LRI_0304 peptidase U34 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LRI_1197 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LRI_1342 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LRI_0863 peptidase U34, dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LRI_0683 Abortive infection protein K07052 K07052; CAAX protease family protein D LRI_0459 Abortive infection protein K07052 K07052; CAAX protease family protein D LRI_0148 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LRI_0243 endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-] D LRI_0675 dipeptidase K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-] D LRI_1770 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LRI_1563 peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LRI_0416 M20/M25/M40 family peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LRI_1161 tripeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D LRI_1292 amino acid amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D LRI_0594 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D LRI_1367 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D LRI_0784 Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D LRI_1689 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LRI_1715 heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D LRI_1218 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D LRI_0028 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D LRI_0422 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LRI_1548 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D LRI_0341 Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11] D LRI_1264 endopeptidase K07177 K07177; Lon-like protease D LRI_1230 SOS-response transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D LRI_1882 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LRI_0340 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D LRI_0762 Rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D LRI_1512 prophage Lp3 protein 18 K06904 GP4; Escherichia/Staphylococcus phage prohead protease C 01003 Glycosyltransferases [BR:lrt01003] D LRI_0644 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LRI_1627 glycosyltransferase K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D LRI_0645 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] D LRI_1049 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LRI_0697 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LRI_0088 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LRI_0089 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D LRI_0710 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] C 01005 Lipopolysaccharide biosynthesis proteins [BR:lrt01005] D LRI_0620 Ribonuclease III K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D LRI_0603 glycosyl transferase family protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lrt01011] D LRI_1449 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LRI_1726 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LRI_1529 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LRI_0719 murC; ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LRI_1321 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LRI_1443 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LRI_1702 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LRI_1375 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LRI_1322 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LRI_1320 murG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LRI_1049 penicillin binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LRI_0697 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LRI_1323 cell division protein FtsI/penicillin-binding protein 2 K08724 pbpB; penicillin-binding protein 2B D LRI_0760 penicillin-binding protein 2B K21465 pbpA; penicillin-binding protein A D LRI_0422 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LRI_0220 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LRI_1281 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LRI_1722 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] C 01004 Lipid biosynthesis proteins [BR:lrt01004] D LRI_0980 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LRI_0978 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LRI_0982 3-oxoacyl-[acyl-carrier protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LRI_0003 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LRI_0981 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LRI_0976 beta-hydroxyacyl-(ACP) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LRI_0984 fabZ; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LRI_0988 enoyl-[acyl-carrier protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D LRI_0811 glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LRI_1128 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LRI_1227 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:lrt01008] D LRI_1656 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:lrt01006] D LRI_0791 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D LRI_1220 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LRI_0767 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LRI_0831 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:lrt01007] D LRI_0769 gltX; glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LRI_1809 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LRI_1752 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LRI_1636 cysS; cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LRI_0696 argS; arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LRI_1745 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LRI_1312 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LRI_1413 valS; valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LRI_0671 leuS; leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LRI_1686 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LRI_1185 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LRI_0145 asnC; asparaginyl-tRNA synthase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LRI_0188 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LRI_1922 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LRI_1168 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LRI_1167 glyS; glycyl-tRNA synthase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LRI_1863 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LRI_1217 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LRI_0172 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LRI_1383 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LRI_0752 pheS; phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LRI_0753 pheT; phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LRI_1591 aminotransferase class I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D LRI_0052 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LRI_1289 aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LRI_1164 amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LRI_0770 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:lrt00194] D LRI_1450 atpC; ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LRI_1451 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LRI_1452 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LRI_1453 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LRI_1454 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LRI_1455 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LRI_1456 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LRI_1457 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:lrt03000] D LRI_1836 transcription regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D LRI_0270 galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LRI_0096 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LRI_0680 ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LRI_1060 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LRI_1366 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LRI_0060 transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LRI_1114 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D LRI_0184 sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D LRI_1432 arabinose operon repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D LRI_1655 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D LRI_0274 transcription regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LRI_0021 transcriptional regulator, MarR family K18909 mepR; MarR family transcriptional regulator, repressor for mepA D LRI_0249 MerR family transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D LRI_0351 ferric uptake regulator, Fur family K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D LRI_0667 ferric uptake regulator family protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D LRI_0551 CRP/FNR family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D LRI_1942 arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D LRI_1955 arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D LRI_1940 transcriptional regulator CadC K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D LRI_1952 transcriptional regulator CadC K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D LRI_0182 transcriptional regulator, ArsR family K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D LRI_0215 transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D LRI_0125 transcriptional regulator, PadR-like family K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D LRI_1620 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D LRI_0468 iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D LRI_1174 biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D LRI_1736 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor D LRI_1287 sugar diacid utilization regulator K02647 cdaR; carbohydrate diacid regulator D LRI_1588 CoA-binding domain-containing protein K01926 rex; redox-sensing transcriptional repressor D LRI_1852 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LRI_1854 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LRI_1472 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D LRI_0793 arginine catabolic regulator K03402 argR; transcriptional regulator of arginine metabolism D LRI_1202 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D LRI_0479 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D LRI_0354 phage shock protein C, PspC K03973 pspC; phage shock protein C D LRI_1573 PspC domain protein K03973 pspC; phage shock protein C D LRI_1844 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D LRI_0082 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D LRI_0725 nrdR; ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D LRI_1326 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:lrt03021] D LRI_0517 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LRI_0482 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LRI_0483 DNA-directed RNA polymerase beta-prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LRI_1728 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D LRI_0797 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LRI_1165 RNA polymerase sigma-43 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D LRI_1085 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor D LRI_1214 transcription termination-antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D LRI_0787 nusB; NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D LRI_1632 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D LRI_0261 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D LRI_0756 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:lrt03019] D LRI_0813 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LRI_0458 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LRI_1257 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LRI_1392 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D LRI_1538 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LRI_1713 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LRI_1384 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D LRI_1149 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LRI_1544 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LRI_1200 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LRI_1586 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LRI_1601 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D LRI_1554 ATP-binding protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:lrt03011] D LRI_1146 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LRI_1224 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LRI_0497 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LRI_1417 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LRI_0508 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LRI_0009 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LRI_0487 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LRI_0505 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LRI_0524 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LRI_0490 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LRI_0516 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LRI_0486 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LRI_0515 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LRI_0504 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LRI_0835 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LRI_1258 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LRI_0818 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LRI_0500 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LRI_0011 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LRI_0495 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LRI_1259 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LRI_1182 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LRI_1630 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LRI_0494 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LRI_0491 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LRI_0492 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LRI_0503 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LRI_0506 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LRI_0013 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LRI_1625 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LRI_1631 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LRI_1624 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LRI_0523 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LRI_0501 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LRI_0510 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LRI_0498 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LRI_0518 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LRI_0507 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LRI_0823 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LRI_0730 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LRI_0780 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LRI_0496 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LRI_0493 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LRI_0502 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LRI_0782 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LRI_0807 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LRI_0499 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LRI_0509 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LRI_1725 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LRI_0741 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LRI_1891 rpmH; 50S ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D LRI_0729 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LRI_0514 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LRI_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:lrt03009] D LRI_0813 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LRI_1170 GTP-binding protein K03595 era; GTPase D LRI_1238 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D LRI_1214 transcription termination-antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D LRI_0787 nusB; NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D LRI_1632 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D LRI_1742 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D LRI_0801 rRNA methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LRI_1266 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D LRI_1190 RsmE family RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D LRI_1855 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LRI_1325 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D LRI_1604 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LRI_0792 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D LRI_1332 rRNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D LRI_1634 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D LRI_0031 alpha/beta knot family protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D LRI_0536 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D LRI_1152 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D LRI_0210 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LRI_0453 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LRI_1338 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LRI_1038 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LRI_1597 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D LRI_0820 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D LRI_1191 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D LRI_1381 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D LRI_1635 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D LRI_1713 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LRI_1384 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D LRI_0804 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LRI_1145 engA; ribosome-associated GTPase EngA K03977 engA; GTPase D LRI_1133 GTPase K14540 rbgA; ribosome biogenesis GTPase A D LRI_0360 GTPase K03665 hflX; GTPase D LRI_0733 GTPase K06948 yqeH; 30S ribosome assembly GTPase D LRI_1464 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LRI_1188 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LRI_1210 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D LRI_1215 Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP D LRI_0005 S4 domain protein YaaA K14761 rlbA; ribosome-associated protein D LRI_0737 iojap family protein K09710 ybeB; ribosome-associated protein D LRI_1172 metalloprotease K07042 ybeY; probable rRNA maturation factor D LRI_0734 RNA-binding protein K07574 yhbY; RNA-binding protein D LRI_1576 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D LRI_1850 ychF; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase D LRI_0740 nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:lrt03016] D LRI_1237 metal-dependent hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D LRI_1142 polyA polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D LRI_1217 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LRI_1312 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LRI_0671 leuS; leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LRI_1745 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LRI_0696 argS; arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LRI_1686 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LRI_1185 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LRI_1383 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LRI_0145 asnC; asparaginyl-tRNA synthase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LRI_0172 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LRI_1863 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LRI_1636 cysS; cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LRI_1413 valS; valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LRI_0188 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LRI_1922 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LRI_0752 pheS; phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LRI_0753 pheT; phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LRI_1809 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LRI_1752 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LRI_1187 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D LRI_0703 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LRI_0706 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D LRI_0522 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D LRI_1209 truB; pseudouridylate synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D LRI_1415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1307 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1464 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LRI_0767 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LRI_1887 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D LRI_1886 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LRI_1890 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D LRI_1168 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LRI_1167 glyS; glycyl-tRNA synthase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LRI_0769 gltX; glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LRI_0305 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D LRI_1585 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D LRI_1613 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D LRI_1687 transcription regulator K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D LRI_0821 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D LRI_1163 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D LRI_1330 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D LRI_0749 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D LRI_1305 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LRI_1387 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D LRI_1414 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D LRI_1691 cell cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D LRI_1598 glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D LRI_1596 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D LRI_1533 ATP/GTP hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D LRI_0739 Nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D LRI_1538 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C 03012 Translation factors [BR:lrt03012] D LRI_1211 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LRI_0728 translation initiation factor IF3 K02520 infC; translation initiation factor IF-3 D LRI_1589 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D LRI_1223 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D LRI_1255 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LRI_0488 fusA; translation elongation factor G K02355 fusA; elongation factor G D LRI_1466 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D LRI_1221 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D LRI_1465 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D LRI_1696 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D LRI_0513 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D LRI_0385 elongation factor P K02356 efp; elongation factor P D LRI_1574 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D LRI_0632 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:lrt03110] D LRI_0480 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D LRI_0640 ATP-dependent Clp protease ATP-binding subunit ClpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D LRI_0054 ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL D LRI_1243 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D LRI_1200 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LRI_1586 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LRI_1199 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D LRI_1688 hslO; heat shock protein K04083 hslO; molecular chaperone Hsp33 D LRI_1201 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D LRI_0660 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D LRI_1587 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D LRI_0028 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D LRI_1689 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LRI_1457 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LRI_0430 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D LRI_0701 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D LRI_0212 thioredoxin K03671 TXN; thioredoxin D LRI_1377 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:lrt04131] D LRI_1754 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LRI_1547 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LRI_1811 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1648 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1158 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LRI_0168 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:lrt04121] C 03051 Proteasome C 03032 DNA replication proteins [BR:lrt03032] D LRI_1041 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LRI_1232 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LRI_1895 HupB1 K03530 hupB; DNA-binding protein HU-beta D LRI_1144 nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D LRI_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LRI_0014 replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LRI_2046 DnaB-like helicase C-terminal domain protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LRI_1166 DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D LRI_0726 DNA replication protein DnaB K03346 dnaB; replication initiation and membrane attachment protein D LRI_0727 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI D LRI_0010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LRI_1159 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LRI_1216 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LRI_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LRI_1260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LRI_1606 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LRI_1530 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LRI_1612 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LRI_1132 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LRI_0722 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LRI_0530 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LRI_0008 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LRI_0007 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D LRI_1126 topoisomerase IV A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LRI_1127 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LRI_1130 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:lrt03036] D LRI_0813 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LRI_1895 HupB1 K03530 hupB; DNA-binding protein HU-beta D LRI_1144 nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D LRI_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LRI_0338 DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein D LRI_0274 transcription regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LRI_0814 cell division protein K03529 smc; chromosome segregation protein D LRI_1154 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D LRI_1153 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D LRI_1318 cell division protein FtsA K03590 ftsA; cell division protein FtsA D LRI_1693 Septum formation initiator K13052 divIC; cell division protein DivIC D LRI_1329 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LRI_1324 cell division protein FtsL K03586 ftsL; cell division protein FtsL D LRI_1319 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D LRI_1268 cell division protein K03588 ftsW; cell division protein FtsW D LRI_1317 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LRI_1416 cell division regulatory protein K06286 ezrA; septation ring formation regulator D LRI_1313 DivIVA family protein K04074 divIVA; cell division initiation protein D LRI_1316 cell division protein K09772 sepF; cell division inhibitor SepF D LRI_1448 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LRI_1405 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LRI_1404 cell shape determining protein MreC K03570 mreC; rod shape-determining protein MreC D LRI_1403 cell shape determining protein MreD K03571 mreD; rod shape-determining protein MreD D LRI_1445 cell division membrane protein K05837 rodA; rod shape determining protein RodA D LRI_2044 ATPase, para family protein K03496 parA; chromosome partitioning protein D LRI_1853 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D LRI_1899 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D LRI_2032 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D LRI_1852 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LRI_1854 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LRI_1126 topoisomerase IV A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LRI_1127 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LRI_1886 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LRI_1855 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LRI_1156 integrase/recombinase K04763 xerD; integrase/recombinase XerD D LRI_1101 phage integrase family protein K04763 xerD; integrase/recombinase XerD D LRI_2045 phage integrase K04763 xerD; integrase/recombinase XerD D LRI_1242 engB; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein D LRI_1552 Transposase K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:lrt03400] D LRI_0574 methylated-DNA-protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D LRI_1535 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LRI_0239 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D LRI_1759 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LRI_0560 Phosphohydrolase(MutT/nudix family protein) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D LRI_1639 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LRI_0448 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LRI_0669 3-methyladenine-DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LRI_0723 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LRI_0656 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LRI_0827 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LRI_1235 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LRI_0530 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LRI_0722 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LRI_1011 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LRI_1556 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LRI_1557 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LRI_1239 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D LRI_0529 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_0363 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_1755 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LRI_0482 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LRI_0483 DNA-directed RNA polymerase beta-prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LRI_0517 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LRI_1728 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D LRI_0797 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LRI_1695 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LRI_1391 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LRI_1378 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D LRI_1390 mutL; DNA mismatch repair protein HexB K03572 mutL; DNA mismatch repair protein MutL D LRI_0789 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LRI_0790 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LRI_1159 DNA-directed DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LRI_1216 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LRI_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LRI_1260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LRI_1606 DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LRI_1530 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LRI_1612 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LRI_0010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LRI_1302 exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LRI_1394 recA; recA protein K03553 recA; recombination protein RecA D LRI_1389 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LRI_1388 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LRI_0799 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D LRI_0928 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D LRI_0927 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D LRI_1638 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D LRI_0006 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D LRI_0810 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LRI_1169 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LRI_1610 recR; recombination protein RecR K06187 recR; recombination protein RecR D LRI_0794 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D LRI_1048 recU; recombination protein RecU K03700 recU; recombination protein U D LRI_0059 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D LRI_0058 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D LRI_0008 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LRI_0007 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D LRI_1130 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D LRI_1895 HupB1 K03530 hupB; DNA-binding protein HU-beta D LRI_1144 nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D LRI_1149 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LRI_0661 DNA-damage repair protein K03502 umuC; DNA polymerase V D LRI_1230 SOS-response transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D LRI_0601 recX; regulatory protein RecX K03565 recX; regulatory protein D LRI_1053 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D LRI_1615 ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LRI_1616 nrdF; Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LRI_1385 exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:lrt03029] D LRI_1211 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LRI_0728 translation initiation factor IF3 K02520 infC; translation initiation factor IF-3 D LRI_1223 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D LRI_1255 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LRI_0488 fusA; translation elongation factor G K02355 fusA; elongation factor G D LRI_1170 GTP-binding protein K03595 era; GTPase D LRI_1809 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LRI_0671 leuS; leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LRI_1185 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LRI_0696 argS; arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LRI_0533 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LRI_0534 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LRI_0532 gatC; glutamyl-tRNA amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LRI_0010 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LRI_1200 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LRI_1201 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D LRI_1586 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LRI_1587 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D LRI_1199 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D LRI_1415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1307 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1889 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_0747 membrane protein OxaA 2 K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:lrt02000] D LRI_0022 ABC transporter-like protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LRI_0302 ABC transporter-like protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D LRI_0303 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D LRI_1409 cytochrome D ABC transporter ATP-binding and permease components K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D LRI_1410 cytochrome D ABC transporter ATP-binding and permease components K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D LRI_0412 ABC transporter related protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D LRI_1141 ABC transporter ATP-binding component K15738 uup; ABC transport system ATP-binding/permease protein D LRI_0345 spermidine/putrescine ABC transporter substrate-binding component K11069 potD; spermidine/putrescine transport system substrate-binding protein D LRI_0344 ornithine carbamoyltransferase K11070 potC; spermidine/putrescine transport system permease protein D LRI_0343 binding-protein-dependent transport system inner membrane protein K11071 potB; spermidine/putrescine transport system permease protein D LRI_0342 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D LRI_1776 glycine betaine/choline ABC transporter substrate bindingcomponent K05845 opuC; osmoprotectant transport system substrate-binding protein D LRI_1773 glycine betaine/choline ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein D LRI_1775 glycine betaine/choline ABC transporter permease component K05846 opuBD; osmoprotectant transport system permease protein D LRI_1774 glycine betaine/choline ABC transporter ATP-binding component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D LRI_0388 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D LRI_0389 phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D LRI_0390 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D LRI_0391 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LRI_1862 glutamine ABC transporter substrate binding and permease components K10036 glnH; glutamine transport system substrate-binding protein D LRI_1861 ABC transporter related protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D LRI_0462 glutamine ABC transporter substrate binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D LRI_0460 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LRI_0461 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LRI_0463 glutamine ABC transporter ATP-binding component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D LRI_1643 ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D LRI_1645 ABC transporter permease component K10009 tcyB; L-cystine transport system permease protein D LRI_1644 ABC transporter ATP-binding component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D LRI_1183 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D LRI_1184 ABC superfamily ATP binding cassette transporter, ABC protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D LRI_0379 ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D LRI_1767 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D LRI_0772 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D LRI_1769 binding-protein-dependent transport system inner membrane protein K02072 metI; D-methionine transport system permease protein D LRI_1768 ABC transporter related protein K02071 metN; D-methionine transport system ATP-binding protein D LRI_0030 ABC transporter binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D LRI_0219 ABC transporter substrate binding component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D LRI_0218 ABC transporter permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein D LRI_0217 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D LRI_1400 glutamine ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LRI_1562 amino acid ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LRI_1402 glutamine ABC transporter membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein D LRI_1401 glutamine ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D LRI_0945 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D LRI_0948 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D LRI_0947 iron(III) ABC transporter ATP-binding component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D LRI_1175 BioY protein K03523 bioY; biotin transport system substrate-specific component D LRI_0521 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LRI_0326 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LRI_0519 cobalt ABC transporter ATP-binding component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LRI_0520 cobalt ABC transporter ATP-binding component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LRI_0327 cobalt ABC transporter ATP-binding component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LRI_0328 ABC transporter membrane protein K16925 ykoE; energy-coupling factor transport system permease protein D LRI_1739 zinc/iron ABC transporter substrate binding component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D LRI_1737 zinc/iron ABC transporter permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D LRI_1738 zinc/iron ABC transporter ATP-binding component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D LRI_0255 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein D LRI_0256 ABC transporter-like protein K19083 braD; bacitracin transport system ATP-binding protein D LRI_2036 exporter of polyketide antibiotic K25149 narB; polyether ionophore transport system permease protein D LRI_2035 multidrug ABC transporter ATPase K25150 narA; polyether ionophore transport system ATP-binding protein D LRI_0705 ABC transporter permease component K25157 ecsB; ABC-2 type transport system permease protein D LRI_0704 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein D LRI_0636 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LRI_0289 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LRI_0042 ABC superfamily ATP binding cassette transporter, membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D LRI_0178 peptide ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D LRI_0180 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LRI_0041 macrolide export ABC superfamily ATP binding cassette transporter, ABC protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LRI_0179 peptide ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LRI_1078 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D LRI_0213 multidrug transport protein K26937 dinF; MATE family, multidrug efflux pump D LRI_0745 multi anti extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump D LRI_1526 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D LRI_0370 oxalate-formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D LRI_0285 major facilitator superfamily transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D LRI_1549 major facilitator superfamily MFS_1 K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D LRI_0952 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LRI_1761 major facilitator superfamily MFS_1 K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein D LRI_0833 multidrug transport protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D LRI_0317 major facilitator superfamily protein transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D LRI_0649 EmrB/QacA family drug resistance transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D LRI_1580 transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D LRI_0168 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family D LRI_0347 major facilitator superfamily MFS_1 K08368 yaaU; MFS transporter, putative metabolite transport protein D LRI_0643 phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LRI_1461 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LRI_0642 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D LRI_1724 PTS cellobiose-specific enzyme IIC component K02761 celB; cellobiose PTS system EIIC component D LRI_0318 PTS system galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D LRI_0300 major intrinsic protein K02440 glpF; glycerol uptake facilitator D LRI_1088 Ion transport 2 domain-containing protein K10716 kch; voltage-gated potassium channel D LRI_0568 ammonium transport protein K03320 amt; ammonium transporter, Amt family D LRI_1621 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D LRI_1370 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel D LRI_0209 magnesium transport protein K03284 corA; magnesium transporter D LRI_1012 camphor resistance CrcB protein K06199 crcB; fluoride exporter D LRI_1013 Camphor resistance CrcB protein K06199 crcB; fluoride exporter D LRI_0288 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D LRI_1017 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D LRI_0055 hypothetical protein K21449 ata; trimeric autotransporter adhesin D LRI_2002 prophage protein K21449 ata; trimeric autotransporter adhesin D LRI_1064 murein hydrolase regulator LrgA K05338 lrgA; holin-like protein D LRI_0280 sugar transport protein K16209 lacS; lactose/raffinose/galactose permease D LRI_0063 major facilitator family transporter K16211 malY; maltose/moltooligosaccharide transporter D LRI_0092 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter D LRI_0095 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter D LRI_0474 lysine transport protein K11733 lysP; lysine-specific permease D LRI_0917 amino acid transport protein K16235 mmuP; S-methylmethionine transporter D LRI_0596 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LRI_1918 APC family amino acid-polyamine-organocation transporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LRI_1470 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LRI_1471 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LRI_0467 cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D LRI_0035 sugar transport family protein K05340 glcU; glucose uptake protein D LRI_1496 sugar transport protein K05340 glcU; glucose uptake protein D LRI_1285 GntP family gluconate:proton (H+) symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D LRI_1113 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D LRI_0272 proton/sodium-glutamate symport protein K11102 gltP; proton glutamate symport protein D LRI_0205 Na-H antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D LRI_1796 Na-H antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D LRI_0324 Na-H antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D LRI_1756 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter D LRI_0403 potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D LRI_0404 TrkA domain-containing protein K03499 trkA; trk/ktr system potassium uptake protein D LRI_1458 uracil transport protein K02824 uraA; uracil permease D LRI_0206 xanthine-uracil transport protein K16169 pbuX; xanthine permease D LRI_1858 nucleoside transport protein K16323 yxjA; purine nucleoside transport protein D LRI_1541 chloride channel protein K03281 clcA; chloride channel protein, CIC family D LRI_0936 Chloride channel core K03281 clcA; chloride channel protein, CIC family D LRI_1771 chloride channel protein K03281 clcA; chloride channel protein, CIC family D LRI_0070 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family D LRI_0174 manganese transport protein K03322 mntH; manganese transport protein D LRI_0406 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein D LRI_1943 arsenical-resistance protein K03325 ACR3; arsenite transporter D LRI_1954 arsenical-resistance protein K03325 ACR3; arsenite transporter D LRI_1874 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D LRI_1840 branched-chain amino acid transport protein K26605 azlC; branched chain amino acid efflux pump D LRI_1839 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D LRI_1873 branched-chain amino acid transporter K26606 azlD; branched chain amino acid efflux pump D LRI_1151 membrane protein K23675 fmnP; riboflavin transporter D LRI_0465 integral membrane protein K22736 VIT; vacuolar iron transporter family protein D LRI_0466 Integral membrane protein K22736 VIT; vacuolar iron transporter family protein D LRI_1268 cell division protein K03588 ftsW; cell division protein FtsW D LRI_0965 respiratory membrane bound nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LRI_0966 respiratory membrane bound nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LRI_0968 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LRI_0876 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D LRI_0875 exopolysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D LRI_0260 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D LRI_1079 feoA domain-containing protein K04758 feoA; ferrous iron transport protein A D LRI_1080 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D LRI_1868 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:lrt02044] D LRI_1315 cell division membrane protein K02221 yggT; YggT family protein D LRI_1263 DNA internalization-related competence protein ComEA K02237 comEA; competence protein ComEA D LRI_1262 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D LRI_1261 DNA internalization-related competence protein ComEC K02238 comEC; competence protein ComEC D LRI_1578 competence protein K02240 comFA; competence protein ComFA D LRI_1577 amidophosphoribosyltransferase-like protein K02242 comFC; competence protein ComFC D LRI_1363 competence protein K02243 comGA; competence protein ComGA D LRI_1362 competence protein K02244 comGB; competence protein ComGB D LRI_1361 competence protein ComGC K02245 comGC; competence protein ComGC D LRI_1360 prepilin-type N-terminal cleavage/methylation domain-containing protein K02246 comGD; competence protein ComGD D LRI_0485 peptidase A24A domain protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LRI_0855 preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LRI_1575 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LRI_1633 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LRI_1540 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LRI_0511 protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LRI_0851 secretory protein SecY K03076 secY; preprotein translocase subunit SecY D LRI_0817 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LRI_0815 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D LRI_1386 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D LRI_1889 cell division protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_0747 membrane protein OxaA 2 K03217 yidC; YidC/Oxa1 family membrane protein insertase D LRI_0852 accessory secretory protein asp1 K12268 asp1; accessory secretory protein Asp1 D LRI_0853 accessory secretory protein asp2 K12269 asp2; accessory secretory protein Asp2 D LRI_0854 accessory secretory protein asp3 K12270 asp3; accessory secretory protein Asp3 C 02042 Bacterial toxins [BR:lrt02042] D LRI_0288 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D LRI_1017 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D LRI_1138 hemolysin III family channel protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:lrt02022] D LRI_0387 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D LRI_0024 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LRI_0023 two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D LRI_0257 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D LRI_0258 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D LRI_0743 two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LRI_0742 two component transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D LRI_1498 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D LRI_0958 two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D LRI_0956 two component response regulator K07696 nreC; two-component system, NarL family, response regulator NreC D LRI_1071 response regulator K07696 nreC; two-component system, NarL family, response regulator NreC D LRI_1066 two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D LRI_1065 two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT D LRI_1489 two-component response regulator K07719 glnL; two-component system, response regulator GlnL C 02035 Bacterial motility proteins [BR:lrt02035] D LRI_1643 ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:lrt04812] D LRI_1448 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LRI_1405 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LRI_1902 hypothetical protein K18640 parM; plasmid segregation protein ParM D LRI_1317 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LRI_1318 cell division protein FtsA K03590 ftsA; cell division protein FtsA D LRI_2044 ATPase, para family protein K03496 parA; chromosome partitioning protein D LRI_1853 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D LRI_1899 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D LRI_2032 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D LRI_1852 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LRI_1854 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:lrt04147] D LRI_1544 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LRI_1547 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LRI_1546 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LRI_1158 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LRI_1586 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LRI_1200 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK D LRI_1494 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LRI_1843 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LRI_1255 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LRI_0703 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LRI_0585 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0436 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0694 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1062 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1194 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_1766 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LRI_0061 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LRI_0512 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LRI_1234 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D LRI_1176 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LRI_1177 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LRI_0268 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LRI_0866 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D LRI_0768 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LRI_1813 purH; phosphoribosylaminoimidazolecarboxamide/formyltransferase; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LRI_1272 pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LRI_0284 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LRI_1791 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1720 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1545 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LRI_1811 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LRI_1648 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:lrt02048] D LRI_1594 proA; gamma-glutamyl phosphate reductase K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D LRI_1098 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D LRI_1102 ribosomal protein L10 K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D LRI_1103 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D LRI_1753 DNA (cytosine-5-)-methyltransferase domain-containing protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D LRI_1357 adenine-specific methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D LRI_0541 restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D LRI_0540 type III restriction-modification system StyLTI enzyme mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D LRI_2017 HNH endonuclease domain protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D LRI_1701 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D LRI_0717 RelE family toxin-antitoxin system K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D LRI_2027 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J D LRI_0718 prevent-host-death family protein K19159 yefM; antitoxin YefM D LRI_0672 phage protein K18843 hicB; antitoxin HicB D LRI_0354 phage shock protein C, PspC K03973 pspC; phage shock protein C D LRI_1573 PspC domain protein K03973 pspC; phage shock protein C D LRI_1097 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D LRI_1317 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LRI_1448 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LRI_1405 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LRI_1126 topoisomerase IV A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LRI_1127 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LRI_1415 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LRI_1307 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:lrt01504] D LRI_2018 TetW K18220 tetM; ribosomal protection tetracycline resistance protein D LRI_0312 elongation factor G K18220 tetM; ribosomal protection tetracycline resistance protein D LRI_0412 ABC transporter related protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D LRI_2025 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D LRI_0419 penicillin-binding protein transpeptidase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LRI_1705 D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LRI_1706 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export D LRI_1707 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LRI_1708 D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein D LRI_0452 Lysyl-tRNA synthetase (class II) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D LRI_0022 ABC transporter-like protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LRI_0021 transcriptional regulator, MarR family K18909 mepR; MarR family transcriptional regulator, repressor for mepA C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:lrt03100] D LRI_t0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LRI_t0035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LRI_t0056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LRI_t0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LRI_t0064 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LRI_t0066 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LRI_t0003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LRI_t0044 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LRI_t0037 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LRI_t0019 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LRI_t0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LRI_t0062 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LRI_t0059 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LRI_t0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0058 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LRI_t0022 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0029 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0026 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LRI_t0018 tRNA-His K14226 tRNA-His; tRNA His D LRI_t0068 tRNA-His K14226 tRNA-His; tRNA His D LRI_t0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LRI_t0041 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LRI_t0057 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LRI_t0036 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LRI_t0061 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LRI_t0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LRI_t0002 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LRI_t0054 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LRI_t0038 tRNA-Met K14230 tRNA-Met; tRNA Met D LRI_t0045 tRNA-Met K14230 tRNA-Met; tRNA Met D LRI_t0047 tRNA-Met K14230 tRNA-Met; tRNA Met D LRI_t0048 tRNA-Met K14230 tRNA-Met; tRNA Met D LRI_t0015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LRI_t0043 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LRI_t0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LRI_t0028 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LRI_t0049 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LRI_t0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LRI_t0046 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LRI_t0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LRI_t0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LRI_t0012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LRI_t0053 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LRI_t0067 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LRI_t0069 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LRI_t0065 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LRI_t0017 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LRI_t0063 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LRI_t0016 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LRI_t0004 tRNA-Val K14237 tRNA-Val; tRNA Val D LRI_t0014 tRNA-Val K14237 tRNA-Val; tRNA Val D LRI_t0031 tRNA-Val K14237 tRNA-Val; tRNA Val D LRI_t0055 tRNA-Val K14237 tRNA-Val; tRNA Val D LRI_r0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LRI_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LRI_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LRI_r0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D LRI_0118 2,5-didehydrogluconate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D LRI_0131 aldo-keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D LRI_0712 aldo/keto reductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-] D LRI_0319 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D LRI_0773 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D LRI_1772 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D LRI_1668 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LRI_0840 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D LRI_0414 prephenate dehydrogenase TyrA K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D LRI_0332 thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D LRI_1944 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D LRI_1953 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D LRI_0545 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D LRI_0651 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D LRI_1828 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D LRI_1042 site-specific DNA-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D LRI_1946 acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D LRI_1434 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D LRI_1495 galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D LRI_0998 nucleoside deoxyribosyltransferase K08728 E2.4.2.6; nucleoside deoxyribosyltransferase [EC:2.4.2.6] D LRI_1570 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D LRI_0101 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D LRI_0809 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D LRI_0990 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LRI_1933 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LRI_1525 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D LRI_1571 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D LRI_1539 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D LRI_1866 beta-lactamase K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103] D LRI_0245 RNase III regulator YmdB K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D LRI_0266 protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LRI_0925 exopolysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LRI_0732 hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D LRI_0012 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D LRI_1744 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LRI_1743 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D LRI_0906 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D LRI_0195 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D LRI_0576 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LRI_1276 def; N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LRI_0746 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LRI_1793 esterase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D LRI_0124 phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-] D LRI_0402 67 kDa myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53] D LRI_0674 carbohydrate kinase, YjeF related protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D LRI_0190 carbohydrate kinase, YjeF related protein K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6] D LRI_1883 ATP-grasp superfamily protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D LRI_1938 cation transport ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D LRI_0548 P-ATPase superfamily P-type ATPase cadmium transporter K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D LRI_1565 oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE D LRI_1566 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D LRI_1567 YkgG family protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D LRI_1075 NifU family protein K04488 iscU; nitrogen fixation protein NifU and related proteins D LRI_1786 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D LRI_1034 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D LRI_1137 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D LRI_0287 NrdI family protein K03647 nrdI; protein involved in ribonucleotide reduction D LRI_1043 NrdI family protein K03647 nrdI; protein involved in ribonucleotide reduction D LRI_1005 DNA-entry nuclease K15051 endA; DNA-entry nuclease C 99985 Amino acid metabolism D LRI_0783 alanine racemase domain-containing protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D LRI_0646 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D LRI_1155 putative reductase K02859 ribT; riboflavin biosynthesis RibT protein D LRI_1016 ABC transporter K03688 ubiB; ubiquinone biosynthesis protein D LRI_0961 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D LRI_0469 cold-shock DNA-binding protein family protein K03704 cspA; cold shock protein D LRI_1311 major cold shock protein K03704 cspA; cold shock protein D LRI_1346 regulatory protein spx K16509 spxA; regulatory protein spx D LRI_1652 transcription accessory protein K06959 tex; protein Tex C 99974 Translation D LRI_1692 S1-type RNA-binding domain protein K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D LRI_1244 tig; trigger factor K03545 tig; trigger factor D LRI_1537 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D LRI_1614 NrdH family redoxin K06191 nrdH; glutaredoxin-like protein NrdH D LRI_0050 OsmC family protein K07397 yhfA; putative redox protein D LRI_1345 competence negative regulator K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D LRI_1406 DNA repair protein RadC K03630 radC; DNA repair protein RadC D LRI_1131 DNA processing protein K04096 smf; DNA processing protein D LRI_1051 primosome, DnaD subunit K02086 dnaD; DNA replication protein D LRI_1429 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D LRI_1505 prophage P3 protein 8, DNA primase/helicase K06919 K06919; putative DNA primase/helicase D LRI_0039 transposase K07482 K07482; transposase, IS30 family D LRI_0044 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0048 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0140 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_0142 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0160 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0547 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0561 transposase K07482 K07482; transposase, IS30 family D LRI_0567 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_0221 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_0222 transposase K07482 K07482; transposase, IS30 family D LRI_0223 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0248 transposase K07482 K07482; transposase, IS30 family D LRI_0250 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0253 transposase K07482 K07482; transposase, IS30 family D LRI_0273 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_0281 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_0374 transposase K07482 K07482; transposase, IS30 family D LRI_0386 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0401 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_0420 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0432 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_0103 transposase K07482 K07482; transposase, IS30 family D LRI_0105 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0634 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_0888 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_1685 transposase K07482 K07482; transposase, IS30 family D LRI_0908 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_0909 transposase K07482 K07482; transposase, IS30 family D LRI_0942 transposase K07482 K07482; transposase, IS30 family D LRI_1762 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_1764 transposase K07482 K07482; transposase, IS30 family D LRI_0989 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_1785 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_1803 transposase K07482 K07482; transposase, IS30 family D LRI_1808 transposase K07482 K07482; transposase, IS30 family D LRI_1044 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_1878 transposase K07482 K07482; transposase, IS30 family D LRI_1894 transposase K07482 K07482; transposase, IS30 family D LRI_1916 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_1945 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_1180 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_1204 Transposase, IS30 family K07482 K07482; transposase, IS30 family D LRI_1250 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_1253 transposase K07482 K07482; transposase, IS30 family D LRI_1350 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_1442 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_1515 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_1521 integrase catalytic subunit K07482 K07482; transposase, IS30 family D LRI_1913 Transposase ISLasa14 K07483 K07483; transposase D LRI_0170 transposase K07483 K07483; transposase D LRI_0334 transposase ISLasa7, IS3 family K07483 K07483; transposase D LRI_1865 transposase K07483 K07483; transposase D LRI_1948 transposase K07483 K07483; transposase D LRI_1678 IS66 Orf2 family protein K07484 K07484; transposase D LRI_0899 transposase K07484 K07484; transposase D LRI_0892 IS66 Orf2 family protein K07484 K07484; transposase D LRI_1336 IS66 Orf2 family protein K07484 K07484; transposase D LRI_0893 IS66 family element transposase K07484 K07484; transposase D LRI_0894 IS66 family element transposase K07484 K07484; transposase D LRI_1335 IS66 family element transposase K07484 K07484; transposase D LRI_1669 IS66 family element transposase K07484 K07484; transposase D LRI_1674 IS66 family element transposase K07484 K07484; transposase D LRI_0489 transposase K07485 K07485; transposase D LRI_0911 transposase K07485 K07485; transposase D LRI_0914 ISL3 family transposase ISLasa4k K07485 K07485; transposase D LRI_1763 transposase K07485 K07485; transposase D LRI_0969 transposase K07485 K07485; transposase D LRI_1003 transposase K07485 K07485; transposase D LRI_1045 transposase K07485 K07485; transposase D LRI_2038 transposase K07485 K07485; transposase D LRI_1245 transposase K07485 K07485; transposase D LRI_1349 transposase K07485 K07485; transposase D LRI_1543 transposase K07485 K07485; transposase D LRI_0278 transposase K07491 rayT; REP-associated tyrosine transposase D LRI_0396 transposase K07491 rayT; REP-associated tyrosine transposase D LRI_0919 transposase K07491 rayT; REP-associated tyrosine transposase D LRI_1031 IS200-IS605 family transposase ISLasa8a K07491 rayT; REP-associated tyrosine transposase D LRI_1837 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D LRI_0871 transposase K07491 rayT; REP-associated tyrosine transposase D LRI_0757 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D LRI_1675 transposase K07493 K07493; putative transposase D LRI_0279 transposase K07496 K07496; putative transposase D LRI_0397 transposase K07496 K07496; putative transposase D LRI_0427 transposase K07496 K07496; putative transposase D LRI_0872 transposase K07496 K07496; putative transposase D LRI_0920 transposase K07496 K07496; putative transposase D LRI_1030 IS605 family transposase OrfB K07496 K07496; putative transposase D LRI_0171 integrase catalytic subunit K07497 K07497; putative transposase D LRI_0202 integrase catalytic subunit K07497 K07497; putative transposase D LRI_0333 Integrase catalytic region K07497 K07497; putative transposase D LRI_0380 integrase catalytic subunit K07497 K07497; putative transposase D LRI_1712 IS3 family transposase ISLasa5a K07497 K07497; putative transposase D LRI_0896 integrase catalytic subunit K07497 K07497; putative transposase D LRI_0946 Integrase catalytic region K07497 K07497; putative transposase D LRI_1864 integrase catalytic subunit K07497 K07497; putative transposase D LRI_1909 transposase K07497 K07497; putative transposase D LRI_1912 transposase K07497 K07497; putative transposase D LRI_1123 Integrase catalytic region K07497 K07497; putative transposase D LRI_1947 integrase catalytic subunit K07497 K07497; putative transposase D LRI_1964 Integrase catalytic region K07497 K07497; putative transposase D LRI_1298 integrase catalytic subunit K07497 K07497; putative transposase D LRI_1419 IS3 family transposase ISLasa5a K07497 K07497; putative transposase D LRI_1440 integrase catalytic subunit K07497 K07497; putative transposase D LRI_0829 Integrase catalytic region K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D LRI_1611 UPF0133 protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D LRI_0666 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D LRI_1006 amino acid permease-associated region K03293 TC.AAT; amino acid transporter, AAT family D LRI_1542 APC family amino acid transporter K03293 TC.AAT; amino acid transporter, AAT family D LRI_1859 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D LRI_0166 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LRI_0348 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LRI_1758 APC family amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LRI_1555 APC family amino acid-polyamine-organocation transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LRI_0822 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LRI_1661 di-/tripeptide transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D LRI_0227 branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D LRI_0310 branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D LRI_1700 cytosine transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D LRI_0437 cation transport protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D LRI_1657 AAE family aspartate:alanine exchanger K07085 K07085; putative transport protein C 99978 Cell growth D LRI_1888 RNA-binding protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D LRI_1269 GTP-binding protein TypA K06207 typA; GTP-binding protein D LRI_1025 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D LRI_1173 phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D LRI_0040 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D LRI_0392 phosphate uptake regulator K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D LRI_0158 GNAT family acetyltransferase K02348 elaA; ElaA protein D LRI_0582 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein D LRI_1343 competence protein K06198 coiA; competence protein CoiA D LRI_0716 tRNA-binding domain-containing protein K06878 K06878; tRNA-binding protein D LRI_1074 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D LRI_0652 feS assembly protein SufD K09014 sufB; Fe-S cluster assembly protein SufB D LRI_1077 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D LRI_0598 ribonuclease BN K07058 K07058; membrane protein D LRI_0286 3-demethylubiquinone-9 3-methyltransferase K04750 phnB; PhnB protein D LRI_1716 LemA family protein K03744 lemA; LemA protein D LRI_0362 DedA family membrane protein K03975 dedA; membrane-associated protein D LRI_1351 SNARE associated Golg-family protein K03975 dedA; membrane-associated protein D LRI_0356 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein D LRI_1572 integral membrane protein K08972 K08972; putative membrane protein D LRI_0323 membrane protein K08987 K08987; putative membrane protein D LRI_1058 integral membrane protein K08996 yagU; putative membrane protein D LRI_1792 phosphate-starvation-inducible E K13256 psiE; protein PsiE C 99997 Function unknown D LRI_1731 HD domain-containing protein K06885 K06885; uncharacterized protein D LRI_0476 membrane protein K06889 K06889; uncharacterized protein D LRI_0309 alpha/beta fold family hydrolase-like protein K06889 K06889; uncharacterized protein D LRI_0322 alpha/beta hydrolase K06889 K06889; uncharacterized protein D LRI_0581 integral membrane protein K06890 K06890; uncharacterized protein D LRI_0720 integral membrane protein, interacts with FtsH K06890 K06890; uncharacterized protein D LRI_1032 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D LRI_0750 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D LRI_0819 RNA-binding protein K06960 K06960; uncharacterized protein D LRI_1640 acetyltransferase K06975 K06975; uncharacterized protein D LRI_0384 membrane protein K07035 K07035; uncharacterized protein D LRI_0155 nitroreductase-like oxidoreductase K07078 K07078; uncharacterized protein D LRI_0329 transport protein K07090 K07090; uncharacterized protein D LRI_1373 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D LRI_0229 phosphoesterase, DHHA1 K07097 K07097; uncharacterized protein D LRI_1798 FMN reductase K07118 K07118; uncharacterized protein D LRI_1236 oxidoreductase K07124 K07124; uncharacterized protein D LRI_0368 ATPase AAA K07133 K07133; uncharacterized protein D LRI_0375 Sugar specific permease (Putative) K07149 K07149; uncharacterized protein D LRI_1447 alpha-hemolysin-like protein K08998 K08998; uncharacterized protein D LRI_1181 GatB/Yqey family protein K09117 K09117; uncharacterized protein D LRI_1026 UPF0210 protein K09157 K09157; uncharacterized protein D LRI_1009 excinuclease ABC C subunit domain protein K09384 K09384; uncharacterized protein D LRI_0816 helix-turn-helix protein, YlxM/p13 family K09787 K09787; uncharacterized protein D LRI_1157 S1 RNA binding domain-containing protein K00243 K00243; uncharacterized protein D LRI_1422 YaaA like protein K09861 K09861; uncharacterized protein D LRI_1228 UPF0154 protein K09976 K09976; uncharacterized protein D LRI_0781 ribosomal protein K07584 ysxB; uncharacterized protein D LRI_1213 nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 1, 2024