+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Mycobacterium avium subsp. paratuberculosis MAP4

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D MAP4_0807 ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D MAP4_1503 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C MAP4_1677 GTP-binding protein Era K03595 era; GTPase C MAP4_1560 GTP1obg-family GTP-binding protein obg K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C MAP4_0896 Transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C MAP4_2756 N utilization substance protein B nusB K03625 nusB; transcription antitermination protein NusB C MAP4_4236 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D MAP4_2884 dimethyladenosine transferase KsgA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D MAP4_2719 putative Fmu protein (SUN protein), ribosomal RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D MAP4_0799 methyltransferasemethylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D MAP4_1661 16S ribosomal RNA small subunitmethyl transferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D MAP4_4471 glucose-inhibited division protein B Gid K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D MAP4_1923 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D MAP4_2916 putative methylase, tetrapyrrole methylase domain-containing protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D MAP4_2444 cytotoxinhemolysin TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D MAP4_3388 tRNArRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D MAP4_0862 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D MAP4_2444 cytotoxinhemolysin TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D MAP4_0357 putative RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D MAP4_2432 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D MAP4_2600 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C MAP4_4387 ribosomal-protein-alanine acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C MAP4_2934 ribosomal-protein-alanine acetyltransferase rimJ K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C MAP4_0827 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM B rRNA processing factors C MAP4_0807 ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3] C MAP4_1557 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C MAP4_2776 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C MAP4_1301 cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C MAP4_1677 GTP-binding protein Era K03595 era; GTPase C MAP4_0449 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C MAP4_2430 GTP-binding protein EngA K03977 engA; GTPase C MAP4_1560 GTP1obg-family GTP-binding protein obg K03979 obgE; GTPase [EC:3.6.5.-] C MAP4_0970 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C MAP4_1363 hypothetical protein, YrdCSua5 family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C MAP4_2809 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C MAP4_0899 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C MAP4_0895 hypothetical protein K09748 rimP; ribosome maturation factor RimP C MAP4_1581 hypothetical protein K09710 ybeB; ribosome-associated protein C MAP4_1663 putative metalloprotease K07042 ybeY; probable rRNA maturation factor C MAP4_1134 GTP-dependent nucleic acid-binding protein K06942 ychF; ribosome-binding ATPase C MAP4_0806 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024