+D
#
Transfer RNA Biogenesis - Momordica charantia (bitter melon)
%
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D 111008472 ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 111004973 uncharacterized protein LOC111004973 isoform X1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 111014938 uncharacterized protein LOC111014938 isoform X1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 111012044 probable ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 111015544 uncharacterized protein LOC111015544 isoform X1 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 111014501 proteinaceous RNase P 1, chloroplastic/mitochondrial-like K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
D 111013873 proteinaceous RNase P 2 K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
D 111025808 proteinaceous RNase P 1, chloroplastic/mitochondrial-like K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D 111016700 tRNase Z TRZ3, mitochondrial isoform X1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 111016736 tRNase Z TRZ2, chloroplastic K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 111005940 tRNase Z TRZ1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 111022224 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111018138 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111011504 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111011505 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111011506 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111013123 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111019173 ribonuclease 3-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111023418 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025626 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111013421 ribonuclease 2 isoform X1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111020337 ribonuclease MC K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111013449 ribonuclease 1-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111024276 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025371 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025745 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025771 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111006533 ribonuclease 1-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111012440 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111024988 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025393 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025395 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111019062 extracellular ribonuclease LE-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111011746 pentatricopeptide repeat-containing protein At5g25630 isoform X1 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 111014569 pentatricopeptide repeat-containing protein At5g21222-like K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 111015641 putative pentatricopeptide repeat-containing protein At2g02150 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 111015970 pentatricopeptide repeat-containing protein At2g01740 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 111020876 pentatricopeptide repeat-containing protein At2g18940, chloroplastic K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonuclease complex
D 111015540 tRNA-splicing endonuclease subunit Sen2-1 K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 111023660 uncharacterized protein LOC111023660 K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
C tRNA splicing ligase complex
C Other tRNA splicing factors
D 111016108 tRNA 2'-phosphotransferase 1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
D 36165197 matK; maturase K K20000 MATK; maturase K
B tRNA transport factors
C tRNA export factors
D 111004645 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
D 111004646 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
D 111014403 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
D 111014404 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
D 111017550 exportin-T K14288 XPOT; exportin-T
D 111011464 protein EXPORTIN 1A K14290 XPO1; exportin-1
D 111013022 protein HASTY 1 K14289 XPO5; exportin-5
D 111009637 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 111011110 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 111006339 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 111018177 probable inactive serine/threonine-protein kinase scy1 isoform X1 K08876 SCYL1; SCY1-like protein 1
C tRNA import factors
D 111016896 transportin-3 isoform X1 K15436 TRPO3; transportin-3
D 111007010 transportin MOS14 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 111007681 glutamate--tRNA ligase, chloroplastic/mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 111024262 glutamate--tRNA ligase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 111015580 proline--tRNA ligase, cytoplasmic K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 111008350 proline--tRNA ligase, chloroplastic/mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 111024543 isoleucine--tRNA ligase, cytoplasmic isoform X1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111009237 isoleucine--tRNA ligase, chloroplastic/mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111005504 leucine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 111023537 leucine--tRNA ligase, cytoplasmic K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 111009713 probable methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111017803 methionine--tRNA ligase, cytoplasmic-like K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111006379 methionine--tRNA ligase, chloroplastic/mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111006940 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 111014599 arginine--tRNA ligase, cytoplasmic isoform X1 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 111020831 lysine--tRNA ligase, cytoplasmic K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 111021239 lysine--tRNA ligase, chloroplastic/mitochondrial K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 111009525 aspartate--tRNA ligase 2, cytoplasmic K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 111017747 aspartate--tRNA ligase, chloroplastic/mitochondrial K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 111015946 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
C Other AARSs
D 111011165 alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111020722 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111020723 alanine--tRNA ligase-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111021381 asparagine--tRNA ligase, chloroplastic/mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 111022537 asparagine--tRNA ligase, cytoplasmic 1-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 111023596 asparagine--tRNA ligase, cytoplasmic 2 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 111017072 glycine--tRNA ligase, mitochondrial 1-like K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 111023566 threonine--tRNA ligase, mitochondrial 1-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111007557 threonine--tRNA ligase, chloroplastic/mitochondrial 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111020133 threonine--tRNA ligase, mitochondrial 1-like isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111015292 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 111006001 serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 111020061 cysteine--tRNA ligase 2, cytoplasmic K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 111008869 cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 111013225 valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 111023228 valine--tRNA ligase, mitochondrial 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 111013661 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 111020184 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 111022634 phenylalanine--tRNA ligase alpha subunit, cytoplasmic K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111015788 phenylalanine--tRNA ligase, chloroplastic/mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111007062 phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 111011519 tyrosine--tRNA ligase, chloroplastic/mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 111026078 tyrosine--tRNA ligase 1, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 111005020 tryptophan--tRNA ligase, chloroplastic/mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111015924 tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D 111010928 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 111005213 D-aminoacyl-tRNA deacylase isoform X1 K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
B tRNA modification factors
C Deaminases
D 111023070 tRNA-specific adenosine deaminase 1 isoform X1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 111007321 tRNA-specific adenosine deaminase 2 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 111012110 probable inactive tRNA-specific adenosine deaminase-like protein 3 K15442 TAD3; tRNA-specific adenosine deaminase 3
C Dihydorouridine synthases
D 111017278 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 111005266 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D 111007837 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
C Methylthiotransferase
D 111022375 threonylcarbamoyladenosine tRNA methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
C Methyltransferases
D 111015931 tRNA (guanine(26)-N(2))-dimethyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 111006460 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 111011085 zinc finger CCCH domain-containing protein 24 K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 111022655 uncharacterized protein LOC111022655 isoform X1 K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
D 111005554 tRNA (cytosine(34)-C(5))-methyltransferase-like K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202]
D 111007377 putative methyltransferase NSUN6 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 111010505 tRNA (guanine(37)-N1)-methyltransferase 1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 111024249 tRNA (guanine(37)-N1)-methyltransferase 2 isoform X1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 111024670 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 111014079 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 111015042 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X1 K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 111005201 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 111015991 uncharacterized protein LOC111015991 K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 111012843 uncharacterized protein LOC111012843 isoform X1 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 111013116 methyltransferase-like protein 6 isoform X1 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 111008031 alkylated DNA repair protein alkB homolog 8 isoform X1 K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 111020230 alkylated DNA repair protein alkB homolog 8 isoform X1 K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 111025766 tRNA (guanine(9)-N1)-methyltransferase-like K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 111025770 tRNA (guanine(9)-N1)-methyltransferase-like K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 111017553 tRNA (guanine(10)-N2)-methyltransferase homolog K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 111014027 tRNA:m(4)X modification enzyme TRM13 homolog K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D 111018494 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 111004691 multifunctional methyltransferase subunit TRM112-like protein At1g22270 K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 111005184 DNA (cytosine-5)-methyltransferase isoform X1 K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 111006924 uncharacterized protein LOC111006924 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 111014045 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D 111012371 tRNA wybutosine-synthesizing protein 2/3/4 K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D 111020748 tRNA wybutosine-synthesizing protein 4 K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
C Psudouridine synthases
D 111009557 uncharacterized protein LOC111009557 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111025167 uncharacterized protein LOC111025167 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111017539 uncharacterized protein LOC111017539 isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111005637 tRNA pseudouridine synthase A, mitochondrial-like K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111022025 putative tRNA pseudouridine synthase isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111019726 uncharacterized protein LOC111019726 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111006132 tRNA pseudouridine(38/39) synthase K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D 111006617 uncharacterized protein LOC111006617 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 111025594 pseudouridylate synthase 7 homolog K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 111006876 RNA pseudouridine synthase 7 isoform X1 K15454 PUS9; tRNA pseudouridine32 synthase [EC:5.4.99.28]
D 111012116 putative tRNA pseudouridine synthase Pus10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
C Thiolation factors
D 111017390 uncharacterized protein LOC111017390 K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 111014001 cytoplasmic tRNA 2-thiolation protein 1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 111019863 cytoplasmic tRNA 2-thiolation protein 2 K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
D 111005592 cysteine desulfurase, mitochondrial K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 111014914 ubiquitin-related modifier 1 homolog 2 isoform X1 K12161 URM1; ubiquitin related modifier 1
D 111025340 adenylyltransferase and sulfurtransferase MOCS3 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D 111021824 EKC/KEOPS complex subunit bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 111016118 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 111008475 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 111017625 EKC/KEOPS complex subunit TPRKB K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 111011564 uncharacterized protein LOC111011564 K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
C Elongator complex
D 111006239 elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 111018693 elongator complex protein 2 K11374 ELP2; elongator complex protein 2
D 111007041 elongator complex protein 3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D 111005258 elongator complex protein 4 K11375 ELP4; elongator complex protein 4
D 111013317 elongator complex protein 5 isoform X1 K11376 ELP5; elongator complex protein 5
D 111010200 elongator complex protein 6 K11377 ELP6; elongator complex protein 6
C Elongator related proteins
D 111007992 diphthamide biosynthesis protein 3-like K15455 DPH3; diphthamide biosynthesis protein 3
D 111005080 protein KTI12 homolog isoform X1 K15456 KTI12; protein KTI12
C Other tRNA modification factors
D 111023535 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 111012742 tRNA dimethylallyltransferase 2 isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 111012909 tRNA dimethylallyltransferase 9 isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 111011948 uncharacterized protein LOC111011948 K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 111005412 uncharacterized protein LOC111005412 K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 111023258 queuine tRNA-ribosyltransferase catalytic subunit 1-like K00777 QTRT1; queuine tRNA-ribosyltransferase catalytic subunit [EC:2.4.2.64]
D 111020219 queuine tRNA-ribosyltransferase accessory subunit 2-like K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 111024971 uncharacterized protein C3F10.06c isoform X1 K15463 RIT1; tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]
D 111021869 uncharacterized protein LOC111021869 K15463 RIT1; tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]
D 111021610 THUMP domain-containing protein 1 K06963 TAN1; tRNA acetyltransferase TAN1
D 111005370 tRNA(His) guanylyltransferase 1-like K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D 111006235 arginyl-tRNA--protein transferase 2 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
B tRNA degradation factors
C TRAMP complex
D 111010551 non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 111018196 DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 111016207 DExH-box ATP-dependent RNA helicase DExH9 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C Rapid tRNA decay (RTD) pathway factors
D 111013945 5'-3' exoribonuclease 3-like K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 111010569 PAP-specific phosphatase HAL2-like K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 111010968 PAP-specific phosphatase HAL2-like isoform X1 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 111012385 putative PAP-specific phosphatase, mitochondrial K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D 111016700 tRNase Z TRZ3, mitochondrial isoform X1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 111016736 tRNase Z TRZ2, chloroplastic K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 111005940 tRNase Z TRZ1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 111013644 ribonuclease II, chloroplastic/mitochondrial K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D 111022224 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111018138 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111011504 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111011505 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111011506 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111013123 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111019173 ribonuclease 3-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111023418 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025626 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111013421 ribonuclease 2 isoform X1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111020337 ribonuclease MC K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111013449 ribonuclease 1-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111024276 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025371 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025745 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025771 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111006533 ribonuclease 1-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111012440 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111024988 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025393 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111025395 ribonuclease MC-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 111019062 extracellular ribonuclease LE-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 111005504 leucine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 111023537 leucine--tRNA ligase, cytoplasmic K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 111015580 proline--tRNA ligase, cytoplasmic K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 111008350 proline--tRNA ligase, chloroplastic/mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D 111011519 tyrosine--tRNA ligase, chloroplastic/mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 111026078 tyrosine--tRNA ligase 1, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 111005020 tryptophan--tRNA ligase, chloroplastic/mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111015924 tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 111023566 threonine--tRNA ligase, mitochondrial 1-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111007557 threonine--tRNA ligase, chloroplastic/mitochondrial 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111020133 threonine--tRNA ligase, mitochondrial 1-like isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 111024543 isoleucine--tRNA ligase, cytoplasmic isoform X1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111009237 isoleucine--tRNA ligase, chloroplastic/mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 111020831 lysine--tRNA ligase, cytoplasmic K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 111021239 lysine--tRNA ligase, chloroplastic/mitochondrial K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 111011165 alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111020722 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111020723 alanine--tRNA ligase-like K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 111013225 valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 111023228 valine--tRNA ligase, mitochondrial 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 111009713 probable methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111017803 methionine--tRNA ligase, cytoplasmic-like K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111006379 methionine--tRNA ligase, chloroplastic/mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 111015292 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 111006001 serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 111017747 aspartate--tRNA ligase, chloroplastic/mitochondrial K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 111023800 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 111020061 cysteine--tRNA ligase 2, cytoplasmic K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 111008869 cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 111007681 glutamate--tRNA ligase, chloroplastic/mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 111024262 glutamate--tRNA ligase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 111006940 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 111014599 arginine--tRNA ligase, cytoplasmic isoform X1 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 111022634 phenylalanine--tRNA ligase alpha subunit, cytoplasmic K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111015788 phenylalanine--tRNA ligase, chloroplastic/mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 111007062 phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 111013661 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 111020184 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 111021381 asparagine--tRNA ligase, chloroplastic/mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 111022537 asparagine--tRNA ligase, cytoplasmic 1-like K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 111023596 asparagine--tRNA ligase, cytoplasmic 2 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D 111010928 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 111005213 D-aminoacyl-tRNA deacylase isoform X1 K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
B tRNA modification factors
C Deaminases
D 111017576 tRNA(adenine(34)) deaminase, chloroplastic K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D 111020285 uncharacterized protein LOC111020285 isoform X1 K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
C Methylthiotransferases
C Methyltransferases
D 111005201 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 111015991 uncharacterized protein LOC111015991 K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 111011948 uncharacterized protein LOC111011948 K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 111015191 uncharacterized protein LOC111015191 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D 111006924 uncharacterized protein LOC111006924 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 111008099 uncharacterized protein LOC111008099 K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D 111009557 uncharacterized protein LOC111009557 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111025167 uncharacterized protein LOC111025167 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111017539 uncharacterized protein LOC111017539 isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111005637 tRNA pseudouridine synthase A, mitochondrial-like K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111022025 putative tRNA pseudouridine synthase isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111019726 uncharacterized protein LOC111019726 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 111006617 uncharacterized protein LOC111006617 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 111025594 pseudouridylate synthase 7 homolog K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D 111005592 cysteine desulfurase, mitochondrial K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D 111021824 EKC/KEOPS complex subunit bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 111016118 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 111008475 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D 111005412 uncharacterized protein LOC111005412 K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 111012742 tRNA dimethylallyltransferase 2 isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 111012909 tRNA dimethylallyltransferase 9 isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 111023535 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 111016101 tRNA threonylcarbamoyladenosine dehydratase isoform X1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
B tRNA degradation factors
C 111019948 polyribonucleotide nucleotidyltransferase 2, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 111016614 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024