+D GENES KO #

  KEGG Orthology (KO) - Metallosphaera cuprina

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:mcn00010] D Mcup_0425 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Mcup_1834 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Mcup_2006 D-fructose 1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Mcup_0783 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Mcup_0577 glyceraldehyde-3-phosphate dehydrogenase (NADPH) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Mcup_0576 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Mcup_1229 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Mcup_0070 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Mcup_0560 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Mcup_0823 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Mcup_1655 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Mcup_0533 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1759 pyruvate ferredoxin/flavodoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1587 putative pyruvate: ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1758 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1586 putative pyruvate: ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1589 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1761 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1760 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1588 putative pyruvate: ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1569 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Mcup_1570 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Mcup_0880 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1802 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0954 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0836 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Mcup_0746 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Mcup_1849 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Mcup_0943 succinic semialdehyde dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90] D Mcup_0741 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:mcn00020] D Mcup_0716 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Mcup_1787 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Mcup_0752 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Mcup_1421 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1569 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Mcup_1570 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Mcup_0651 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Mcup_0650 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Mcup_1395 succinate dehydrogenase flavoprotein subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Mcup_1394 succinate dehydrogenase iron-sulfur subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Mcup_1393 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Mcup_1392 succinate dehydrogenase subunit D K18859 sdhD; succinate dehydrogenase subunit D D Mcup_0749 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Mcup_1632 malate dehydrogenase(NAD+) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Mcup_0741 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Mcup_1759 pyruvate ferredoxin/flavodoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1587 putative pyruvate: ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1758 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1586 putative pyruvate: ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1589 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1761 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1760 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1588 putative pyruvate: ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:mcn00030] D Mcup_0425 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Mcup_0404 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Mcup_0405 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Mcup_2030 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Mcup_1845 orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D Mcup_1836 hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Mcup_1888 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Mcup_1506 ribokinase-like domain-containing protein K00852 rbsK; ribokinase [EC:2.7.1.15] D Mcup_1849 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Mcup_0443 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Mcup_0949 2-keto-3-deoxygalactonate aldolase K11395 kdpgA; 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase [EC:4.1.2.55] D Mcup_0943 succinic semialdehyde dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90] D Mcup_0902 galactose 1-dehydrogenase / glucose 1-dehydrogenase K18125 ssgdh; aldose 1-dehydrogenase [NAD(P)+] [EC:1.1.1.359] D Mcup_0900 flap endonuclease-1 K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140] D Mcup_0948 2-keto-3-deoxygalactonate kinase K18126 sskdgK; 2-dehydro-3-deoxygluconokinase / 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.178] D Mcup_1770 carbon-monoxide dehydrogenase (acceptor) K18020 cutA; glyceraldehyde dehydrogenase large subunit [EC:1.2.99.8] D Mcup_1768 glyceraldehyde oxidoreductase medium chain K18021 cutB; glyceraldehyde dehydrogenase medium subunit [EC:1.2.99.8] D Mcup_1769 glyceraldehyde oxidoreductase small chain K18022 cutC; glyceraldehyde dehydrogenase small subunit [EC:1.2.99.8] D Mcup_0274 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Mcup_1834 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Mcup_2006 D-fructose 1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] C 00040 Pentose and glucuronate interconversions D Mcup_1877 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] C 00051 Fructose and mannose metabolism [PATH:mcn00051] D Mcup_0425 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Mcup_1849 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Mcup_0394 nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Mcup_1877 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Mcup_1834 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Mcup_2006 D-fructose 1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Mcup_0783 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:mcn00052] D Mcup_0746 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Mcup_1899 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Mcup_1849 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Mcup_0902 galactose 1-dehydrogenase / glucose 1-dehydrogenase K18125 ssgdh; aldose 1-dehydrogenase [NAD(P)+] [EC:1.1.1.359] D Mcup_0900 flap endonuclease-1 K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140] D Mcup_0949 2-keto-3-deoxygalactonate aldolase K11395 kdpgA; 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase [EC:4.1.2.55] D Mcup_0948 2-keto-3-deoxygalactonate kinase K18126 sskdgK; 2-dehydro-3-deoxygluconokinase / 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.178] D Mcup_1213 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:mcn00500] D Mcup_1213 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Mcup_0818 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Mcup_0817 Alpha-amylase K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1] D Mcup_1211 glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D Mcup_1212 TreY K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D Mcup_1210 TreZ K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D Mcup_1929 glycosyl transferase, group 1 K13057 treT; trehalose synthase [EC:2.4.1.245] D Mcup_1849 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Mcup_0425 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mcn00520] D Mcup_0627 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Mcup_1988 nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Mcup_1849 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Mcup_1830 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D Mcup_1899 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Mcup_0425 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Mcup_0394 nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:mcn00620] D Mcup_0880 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1802 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0954 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1759 pyruvate ferredoxin/flavodoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1587 putative pyruvate: ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1758 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1586 putative pyruvate: ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1589 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1761 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1760 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1588 putative pyruvate: ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1569 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Mcup_1570 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0823 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Mcup_0535 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Mcup_0836 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Mcup_0031 malic enzyme (NAD+) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Mcup_1632 malate dehydrogenase(NAD+) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Mcup_0749 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Mcup_1246 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Mcup_0741 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Mcup_1655 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Mcup_0533 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0194 putative alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Mcup_0462 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Mcup_1480 trans-homoaconitate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mcn00630] D Mcup_0880 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1802 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0954 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1632 malate dehydrogenase(NAD+) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Mcup_0716 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Mcup_1787 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Mcup_0752 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1517 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Mcup_1926 acetyl/propionyl-CoA carboxylase K01964 K01964; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3] D Mcup_0858 acetyl/propionyl-CoA carboxylase K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Mcup_1925 acetyl/propionyl-CoA carboxylase K15037 K15037; biotin carboxyl carrier protein D Mcup_0235 methylmalonyl-CoA mutase beta subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Mcup_1516 methylmalonyl-CoA mutase alpha subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Mcup_1651 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Mcup_1538 FAD linked oxidase domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Mcup_1539 conserved hypothetical protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Mcup_1815 glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D Mcup_0158 SPP-like hydrolase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D Mcup_0617 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1501 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_0579 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Mcup_0564 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Mcup_0563 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Mcup_0565 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0566 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D Mcup_0768 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D Mcup_0662 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Mcup_0274 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Mcup_0745 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Mcup_0891 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] C 00640 Propanoate metabolism [PATH:mcn00640] D Mcup_0880 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1802 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0954 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0836 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1759 pyruvate ferredoxin/flavodoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1587 putative pyruvate: ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1758 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1586 putative pyruvate: ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1589 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1761 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1760 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1588 putative pyruvate: ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Mcup_1926 acetyl/propionyl-CoA carboxylase K01964 K01964; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3] D Mcup_0858 acetyl/propionyl-CoA carboxylase K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Mcup_1925 acetyl/propionyl-CoA carboxylase K15037 K15037; biotin carboxyl carrier protein D Mcup_1793 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Mcup_1517 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Mcup_0235 methylmalonyl-CoA mutase beta subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Mcup_1516 methylmalonyl-CoA mutase alpha subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Mcup_0650 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Mcup_0651 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Mcup_1790 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D Mcup_1789 2,3-dimethylmalate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:mcn00650] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1688 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Mcup_0759 coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D Mcup_0758 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D Mcup_0967 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1] D Mcup_1395 succinate dehydrogenase flavoprotein subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Mcup_1394 succinate dehydrogenase iron-sulfur subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Mcup_1393 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Mcup_1392 succinate dehydrogenase subunit D K18859 sdhD; succinate dehydrogenase subunit D D Mcup_1793 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Mcup_0888 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D Mcup_1759 pyruvate ferredoxin/flavodoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1587 putative pyruvate: ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1758 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1586 putative pyruvate: ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1589 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1761 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1760 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1588 putative pyruvate: ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1569 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Mcup_1570 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Mcup_0583 conserved hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D Mcup_1502 alcohol dehydrogenase K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-] D Mcup_0355 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Mcup_1654 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:mcn00660] D Mcup_0355 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Mcup_1654 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Mcup_0650 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Mcup_0651 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Mcup_1308 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Mcup_1307 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Mcup_1970 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:mcn00562] D Mcup_0534 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Mcup_0380 L-myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Mcup_0783 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:mcn00190] D Mcup_0389 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Mcup_0275 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Mcup_0388 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Mcup_0387 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Mcup_0386 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Mcup_0385 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Mcup_0384 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Mcup_0383 NADH-ubiquinone oxidoreductase, chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Mcup_0382 NADH dehydrogenase (quinone) K15863 nuoLM; NADH-quinone oxidoreductase subunit L/M [EC:7.1.1.2] D Mcup_0381 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Mcup_1395 succinate dehydrogenase flavoprotein subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Mcup_1394 succinate dehydrogenase iron-sulfur subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Mcup_1393 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Mcup_1392 succinate dehydrogenase subunit D K18859 sdhD; succinate dehydrogenase subunit D D Mcup_0285 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Mcup_1446 cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Mcup_1752 cytochrome c oxidase, subunit II K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5] D Mcup_1778 cytochrome b/b6 domain-containing protein K24008 soxC; cytochrome aa3-type oxidase subunit III D Mcup_1609 quinol oxidase polypeptide I K24009 soxB; cytochrome aa3-type oxidase subunit I [EC:7.1.1.4] D Mcup_1779 cytochrome-c oxidase K24009 soxB; cytochrome aa3-type oxidase subunit I [EC:7.1.1.4] D Mcup_1608 quinol oxidase polypeptide II K24010 soxA; cytochrome aa3-type oxidase subunit II [EC:7.1.1.4] D Mcup_1780 cytochrome c oxidase, subunit II K24010 soxA; cytochrome aa3-type oxidase subunit II [EC:7.1.1.4] D Mcup_1747 Cyctochrome oxidase, subunit I/III (soxM) K24011 soxM; cytochrome aa3-type oxidase subunit I/III [EC:7.1.1.4] D Mcup_0368 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Mcup_0367 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Mcup_0366 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Mcup_0369 H+-transporting two-sector ATPase, E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Mcup_0370 vacuolar H+-transporting two-sector ATPase, F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Mcup_0078 conserved hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Mcup_0371 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Mcup_0364 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Mcup_1591 plasma-membrane proton-efflux P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D Mcup_1526 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:mcn00720] D Mcup_1759 pyruvate ferredoxin/flavodoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1587 putative pyruvate: ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1758 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1586 putative pyruvate: ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1589 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1761 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1760 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1588 putative pyruvate: ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1655 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Mcup_0533 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Mcup_1246 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Mcup_1632 malate dehydrogenase(NAD+) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Mcup_0749 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Mcup_1395 succinate dehydrogenase flavoprotein subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Mcup_1394 succinate dehydrogenase iron-sulfur subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Mcup_1393 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Mcup_1392 succinate dehydrogenase subunit D K18859 sdhD; succinate dehydrogenase subunit D D Mcup_0651 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Mcup_0650 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Mcup_0811 succinate semialdehyde reductase (NADPH) K14465 K14465; succinate semialdehyde reductase (NADPH) [EC:1.1.1.-] D Mcup_1674 AMP-dependent synthetase and ligase K14466 K14466; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] D Mcup_0813 4-Hydroxybutyryl-CoA synthetase (AMP-forming) K18861 K18861; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] D Mcup_1685 AMP-dependent synthetase and ligase K25774 K25774; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] D Mcup_0888 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D Mcup_1680 crotonyl-CoA hydratase K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35] D Mcup_0812 3-hydroxybutyryl-CoA dehydrogenase K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1569 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Mcup_1570 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Mcup_1421 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Mcup_0752 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Mcup_1926 acetyl/propionyl-CoA carboxylase K01964 K01964; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3] D Mcup_0858 acetyl/propionyl-CoA carboxylase K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Mcup_1925 acetyl/propionyl-CoA carboxylase K15037 K15037; biotin carboxyl carrier protein D Mcup_1427 malonyl-/succinyl-CoA reductase(NADPH) K15017 K15017; malonyl-CoA/succinyl-CoA reductase (NADPH) [EC:1.2.1.75 1.2.1.76] D Mcup_0293 Malonate semialdehyde reductase (NADPH) K15039 K15039; 3-hydroxypropionate dehydrogenase (NADP+) [EC:1.1.1.298] D Mcup_0744 3-Hydroxypropionyl-CoA synthetase (AMP-forming) K15018 K15018; 3-hydroxypropionyl-coenzyme A synthetase [EC:6.2.1.36] D Mcup_0286 3-Hydroxypropionyl-CoA dehydratase K15019 K15019; 3-hydroxypropionyl-coenzyme A dehydratase [EC:4.2.1.116] D Mcup_0809 acryloyl-CoA reductase (NADPH) K15020 K15020; acryloyl-coenzyme A reductase [EC:1.3.1.84] D Mcup_1517 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Mcup_1516 methylmalonyl-CoA mutase alpha subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Mcup_0235 methylmalonyl-CoA mutase beta subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Mcup_0880 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1802 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0954 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:mcn00680] D Mcup_0745 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Mcup_0891 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Mcup_0579 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Mcup_0274 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Mcup_0560 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Mcup_1246 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Mcup_1632 malate dehydrogenase(NAD+) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Mcup_1834 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Mcup_2006 D-fructose 1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Mcup_1836 hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Mcup_1845 orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D Mcup_0686 FAD-dependent pyridine nucleotide-disulfide oxidoreductase (HdrA-like) K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Mcup_0685 conserved hypothetical protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Mcup_0689 CoB-CoM heterodisulfide reductase (HdrB1-like) K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Mcup_0684 heterodisulfide reductase (HdrC2-like protein) K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Mcup_0688 heterodisulfide reductase (HdrC1-like protein) K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Mcup_0880 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1802 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0954 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1759 pyruvate ferredoxin/flavodoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1587 putative pyruvate: ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1758 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1586 putative pyruvate: ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1589 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1761 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1760 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1588 putative pyruvate: ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1655 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Mcup_0533 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Mcup_1229 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Mcup_0070 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Mcup_0553 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00910 Nitrogen metabolism [PATH:mcn00910] D Mcup_0214 Glu/Leu/Phe/Val dehydrogenase, C terminal protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Mcup_0617 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1501 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1687 carbonic anhydrase beta-class K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:mcn00920] D Mcup_0885 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Mcup_0231 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Mcup_1723 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Mcup_1543 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Mcup_1712 TQO small subunit DoxA domain-containing protein K16936 doxA; thiosulfate dehydrogenase (quinone) small subunit [EC:1.8.5.2] D Mcup_1713 TQO small subunit DoxD K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D Mcup_1702 TQO small subunit DoxD K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D Mcup_1720 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Mcup_1391 conserved hypothetical protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:mcn00061] D Mcup_0467 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_0217 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_1181 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_1263 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_0614 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Mcup_1165 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:mcn00071] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Mcup_1795 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Mcup_0614 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Mcup_1165 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Mcup_1613 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:mcn00561] D Mcup_0274 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Mcup_1830 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] C 00564 Glycerophospholipid metabolism [PATH:mcn00564] D Mcup_1773 conserved hypothetical protein K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D Mcup_2002 NAD(P)-dependent glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D Mcup_2034 geranylgeranylglyceryl phosphate synthase-like protein K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D Mcup_0351 (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D Mcup_0242 conserved hypothetical protein K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] D Mcup_1399 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:mcn00230] D Mcup_1374 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Mcup_1849 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Mcup_0443 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Mcup_0303 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Mcup_0304 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Mcup_0302 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Mcup_1561 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D Mcup_0305 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Mcup_0307 conserved hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Mcup_0306 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Mcup_0301 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Mcup_0785 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Mcup_0786 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Mcup_0308 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Mcup_0018 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Mcup_0016 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D Mcup_0017 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D Mcup_0029 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Mcup_1344 conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D Mcup_0082 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Mcup_0869 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Mcup_1873 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Mcup_0512 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Mcup_0892 conserved hypothetical protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Mcup_1197 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Mcup_0006 adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D Mcup_0015 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Mcup_1943 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Mcup_0117 nucleotide kinase-like protein K18532 AK6; adenylate kinase [EC:2.7.4.3] D Mcup_0010 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D Mcup_0917 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Mcup_0918 bifunctional urease subunit gamma/beta K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:mcn00240] D Mcup_0296 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Mcup_0297 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Mcup_0320 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Mcup_0321 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Mcup_0323 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Mcup_0324 dihydroorotate oxidase B, catalytic subunit K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D Mcup_0319 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Mcup_0318 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Mcup_0465 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Mcup_0029 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Mcup_1844 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Mcup_1941 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Mcup_0026 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Mcup_0025 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Mcup_1922 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Mcup_0512 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Mcup_0892 conserved hypothetical protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Mcup_1198 thymidylate kinase / thymidylate synthase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Mcup_1199 thymidylate kinase-like protein K00943 tmk; dTMP kinase [EC:2.7.4.9] D Mcup_0390 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:mcn00250] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Mcup_1403 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Mcup_1564 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Mcup_0299 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Mcup_0298 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Mcup_0015 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Mcup_0018 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Mcup_0320 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Mcup_0321 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Mcup_1793 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Mcup_0214 Glu/Leu/Phe/Val dehydrogenase, C terminal protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Mcup_1708 succinic semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Mcup_0617 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1501 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_0296 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Mcup_0297 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Mcup_0306 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Mcup_0627 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Mcup_0303 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Mcup_0304 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:mcn00260] D Mcup_0528 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Mcup_0527 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Mcup_0284 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Mcup_1390 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Mcup_0529 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Mcup_0835 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Mcup_0579 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Mcup_0274 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Mcup_1229 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Mcup_0070 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Mcup_0553 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Mcup_0564 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Mcup_0563 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Mcup_0565 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0566 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D Mcup_0768 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D Mcup_0662 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Mcup_0011 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Mcup_0538 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Mcup_0537 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:mcn00270] D Mcup_0060 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Mcup_0061 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Mcup_1841 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Mcup_0584 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Mcup_0348 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Mcup_1998 spermine synthase / spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Mcup_1407 5'-methylthioadenosine phosphorylase II K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Mcup_0654 purine phosphorylase family 1 K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Mcup_0262 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Mcup_2026 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Mcup_2004 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Mcup_0528 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Mcup_0527 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Mcup_0284 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Mcup_1391 conserved hypothetical protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Mcup_1720 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Mcup_1632 malate dehydrogenase(NAD+) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Mcup_0553 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Mcup_0176 nuclease K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226] C 00280 Valine, leucine and isoleucine degradation [PATH:mcn00280] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1795 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Mcup_1926 acetyl/propionyl-CoA carboxylase K01964 K01964; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3] D Mcup_0858 acetyl/propionyl-CoA carboxylase K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Mcup_1925 acetyl/propionyl-CoA carboxylase K15037 K15037; biotin carboxyl carrier protein D Mcup_1517 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Mcup_0235 methylmalonyl-CoA mutase beta subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Mcup_1516 methylmalonyl-CoA mutase alpha subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Mcup_0469 6-phosphogluconate dehydrogenase, NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Mcup_1442 crotonyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0583 conserved hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:mcn00290] D Mcup_0011 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Mcup_1308 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Mcup_1307 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Mcup_1970 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Mcup_0355 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Mcup_1654 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Mcup_0357 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Mcup_1429 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Mcup_0194 putative alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Mcup_0462 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Mcup_1480 trans-homoaconitate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:mcn00300] D Mcup_0284 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Mcup_0528 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Mcup_0527 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Mcup_0227 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Mcup_1343 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Mcup_0168 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Mcup_1906 conserved hypothetical protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D Mcup_1905 L-2-aminoadipate N-acetyltransferase K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43] D Mcup_1908 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D Mcup_1909 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D Mcup_1904 N2-acetyl-L-lysine aminotransferase / acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Mcup_1903 acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00310 Lysine degradation [PATH:mcn00310] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:mcn00220] D Mcup_0524 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Mcup_0299 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Mcup_0298 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Mcup_0917 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Mcup_0918 bifunctional urease subunit gamma/beta K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D Mcup_0306 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Mcup_0617 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1501 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_0214 Glu/Leu/Phe/Val dehydrogenase, C terminal protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Mcup_1906 conserved hypothetical protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D Mcup_0295 L-2-aminoadipate N-acetyltransferase K19412 argX; glutamate---[amino group carrier protein] ligase [EC:6.3.2.60] D Mcup_1908 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D Mcup_1909 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D Mcup_1904 N2-acetyl-L-lysine aminotransferase / acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Mcup_1903 acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:mcn00330] D Mcup_0829 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D Mcup_1598 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Mcup_0094 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Mcup_1998 spermine synthase / spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Mcup_0584 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Mcup_0348 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Mcup_1201 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Mcup_1708 succinic semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:mcn00340] D Mcup_0341 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Mcup_0336 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Mcup_0334 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Mcup_0335 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Mcup_0338 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Mcup_0339 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Mcup_0342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Mcup_0337 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:mcn00350] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Mcup_0342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Mcup_1186 4-hydroxyphenylacetate 3-hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D Mcup_0455 4-hydroxyphenylacetate 3-hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] C 00360 Phenylalanine metabolism [PATH:mcn00360] D Mcup_1689 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Mcup_1796 thioesterase superfamily protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Mcup_1692 crotonyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Mcup_1688 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Mcup_0342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Mcup_1613 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:mcn00380] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:mcn00400] D Mcup_0407 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Mcup_0408 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Mcup_0413 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Mcup_0411 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Mcup_0412 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Mcup_0410 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Mcup_0541 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Mcup_0542 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Mcup_0539 anthranilate phosphoribosyltransferase TrpD-like protein K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Mcup_0540 phosphoribosylanthranilate isomerase TrpF-like protein K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Mcup_0543 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Mcup_0538 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Mcup_0537 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Mcup_0406 chorismate mutase / prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Mcup_0012 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Mcup_0342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:mcn00410] D Mcup_1793 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Mcup_1489 conserved hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00430 Taurine and hypotaurine metabolism D Mcup_1828 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:mcn00450] D Mcup_1391 conserved hypothetical protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Mcup_0060 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Mcup_0061 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Mcup_1360 aminotransferase, class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Mcup_1511 thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Mcup_0372 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:mcn00460] D Mcup_1828 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Mcup_1403 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Mcup_0579 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism D Mcup_0306 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] C 00480 Glutathione metabolism [PATH:mcn00480] D Mcup_1828 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Mcup_1421 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Mcup_1998 spermine synthase / spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis [PATH:mcn00552] D Mcup_1170 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:mcn00730] D Mcup_1215 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Mcup_1524 phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D Mcup_0086 ribulose-1,5-biphosphate synthetase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D Mcup_1531 conserved hypothetical protein K21220 thiN; thiamine-phosphate diphosphorylase [EC:2.5.1.3] D Mcup_0019 AIR synthase-like protein K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Mcup_1943 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Mcup_0881 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:mcn00740] D Mcup_0048 GTP cyclohydrolase IIA K08096 gch3; GTP cyclohydrolase IIa [EC:3.5.4.29] D Mcup_0021 5-amino-6-(5-phosphoribosylamino)uracil reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D Mcup_0045 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D Mcup_0047 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Mcup_0046 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Mcup_0491 conserved hypothetical protein K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D Mcup_0492 cytidyltransferase-like protein K14656 ribL; FAD synthetase [EC:2.7.7.2] D Mcup_1028 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D Mcup_1374 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Mcup_0087 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:mcn00750] D Mcup_0529 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Mcup_0835 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Mcup_0361 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Mcup_0360 glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:mcn00760] D Mcup_0606 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Mcup_0004 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D Mcup_1381 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Mcup_0982 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Mcup_1357 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Mcup_0967 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:mcn00770] D Mcup_0355 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Mcup_1654 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Mcup_0357 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Mcup_1429 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Mcup_1488 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Mcup_1490 pantothenate kinase K06982 pok; pantoate kinase [EC:2.7.1.169] D Mcup_1489 conserved hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D Mcup_1928 phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Mcup_0069 conserved hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] C 00780 Biotin metabolism [PATH:mcn00780] D Mcup_0467 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_0217 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_1181 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_1263 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_0277 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:mcn00785] D Mcup_0672 radical SAM domain-containing protein K09711 lipS1; lipoyl synthase D Mcup_0730 radical SAM domain-containing protein K09711 lipS1; lipoyl synthase D Mcup_0673 radical SAM domain-containing protein K24689 lipS2; lipoyl synthase D Mcup_0729 radical SAM domain-containing protein K24689 lipS2; lipoyl synthase D Mcup_0767 lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Mcup_0671 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Mcup_0731 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0564 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Mcup_0563 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Mcup_0565 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Mcup_0566 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D Mcup_0768 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D Mcup_0662 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:mcn00790] D Mcup_0618 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Mcup_1474 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Mcup_1418 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Mcup_0311 radical SAM domain-containing protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Mcup_0664 ExsB family protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Mcup_1548 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Mcup_1479 conserved hypothetical protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Mcup_0611 beta-ribofuranosylaminobenzene 5'-phosphate synthase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D Mcup_0620 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Mcup_0249 putative molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Mcup_1523 MoaD family protein K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12] D Mcup_1552 molybdenum cofactor synthesis domain-containing protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Mcup_0265 MoeA domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Mcup_0264 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:mcn00670] D Mcup_0579 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Mcup_0565 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Mcup_0390 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Mcup_1597 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:mcn00860] D Mcup_0157 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Mcup_1858 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Mcup_1856 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Mcup_1857 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Mcup_1855 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Mcup_1494 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Mcup_1859 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Mcup_1585 radical SAM domain-containing protein K22226 ahbC; Fe-coproporphyrin III synthase D Mcup_1584 radical SAM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Mcup_0285 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Mcup_0064 sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Mcup_1411 uroporphyrin-III C/tetrapyrrole methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Mcup_0197 uroporphyrin-III C/tetrapyrrole methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Mcup_1412 uroporphyrin-III C/tetrapyrrole methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Mcup_0198 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Mcup_0186 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Mcup_0179 precorrin-6B methylase 2-like protein K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D Mcup_0185 precorrin-6Y C5,15-methyltransferase (decarboxylating) K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D Mcup_0188 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Mcup_0043 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Mcup_0200 hydrogenobyrinic acid a,c-diamide cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D Mcup_0635 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Mcup_0345 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Mcup_1874 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Mcup_1544 GTP:adenosylcobinamide-phosphate guanylyltransferase-like protein K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62] D Mcup_1875 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Mcup_0201 protoporphyrin IX magnesium-chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mcn00130] D Mcup_0193 prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Mcup_0530 3-octaprenyl-4hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Mcup_0087 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Mcup_0990 conserved hypothetical protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Mcup_1658 NADPH-dependent FMN reductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:mcn00900] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0583 conserved hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D Mcup_0580 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D Mcup_0628 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D Mcup_0657 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D Mcup_0656 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D Mcup_0152 aspartate/glutamate/uridylate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D Mcup_0087 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Mcup_0153 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Mcup_0154 geranyltranstransferase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Mcup_1409 polyprenyl synthetase K21268 gdS-2; hexaprenyl diphosphate synthase [EC:2.5.1.82] D Mcup_1902 undecaprenyl pyrophosphate synthetase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:mcn00906] D Mcup_1039 squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Mcup_1041 phytoene dehydrogenase-related protein K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D Mcup_1040 carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:mcn00907] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Mcup_0404 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Mcup_0405 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:mcn00523] D Mcup_0626 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Mcup_0924 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Mcup_1988 nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Mcup_0925 NAD-dependent epimerase/dehydratase protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Mcup_0922 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Mcup_0923 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Mcup_1364 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Mcup_0925 NAD-dependent epimerase/dehydratase protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:mcn00261] D Mcup_0528 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Mcup_0527 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Mcup_0227 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:mcn00521] D Mcup_1849 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Mcup_0534 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Mcup_0380 L-myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Mcup_0626 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Mcup_0924 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Mcup_1988 nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Mcup_0925 NAD-dependent epimerase/dehydratase protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Mcup_0922 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Mcup_0923 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Mcup_1364 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:mcn00525] D Mcup_0626 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Mcup_0924 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Mcup_1988 nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Mcup_0925 NAD-dependent epimerase/dehydratase protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:mcn00401] D Mcup_0406 chorismate mutase / prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Mcup_0342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Mcup_0541 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Mcup_0542 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Mcup_0467 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_0217 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_1181 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_1263 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites D Mcup_1841 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:mcn00362] D Mcup_0166 alpha/beta hydrolase fold protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Mcup_1688 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:mcn00627] D Mcup_0535 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Mcup_0087 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:mcn00364] D Mcup_0961 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:mcn00361] D Mcup_0961 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:mcn00623] D Mcup_0961 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation D Mcup_1759 pyruvate ferredoxin/flavodoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1587 putative pyruvate: ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Mcup_1758 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1586 putative pyruvate: ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Mcup_1589 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1761 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Mcup_1760 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Mcup_1588 putative pyruvate: ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation D Mcup_0759 coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D Mcup_0758 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation D Mcup_0917 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Mcup_0918 bifunctional urease subunit gamma/beta K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00930 Caprolactam degradation D Mcup_1693 crotonyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:mcn03020] D Mcup_0033 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D Mcup_0034 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D Mcup_0035 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D Mcup_0144 DNA-directed RNA polymerase, subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D Mcup_0421 DNA-directed RNA polymerase, subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D Mcup_0068 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D Mcup_1994 DNA-directed RNA polymerase, subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D Mcup_2016 conserved hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6] D Mcup_0032 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D Mcup_0148 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D Mcup_0095 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D Mcup_0051 conserved hypothetical protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:mcn03022] D Mcup_0495 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D Mcup_0097 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D Mcup_0499 transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Mcup_2025 transcription factor IIE (TFIIE), alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D Mcup_0416 DEAD_2 domain-containing protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:mcn03010] D Mcup_0149 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Mcup_1961 30S ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Mcup_0142 30S ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Mcup_1947 30S ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Mcup_0040 30S ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Mcup_1952 30S ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Mcup_0147 30S ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Mcup_0042 30S ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Mcup_0143 30S ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Mcup_0038 30S ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Mcup_0141 30S ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Mcup_1953 30S ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Mcup_0062 30S ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Mcup_1958 30S ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Mcup_1963 30S ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Mcup_1989 30S ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D Mcup_1955 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D Mcup_0065 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D Mcup_1901 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D Mcup_2007 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D Mcup_0605 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D Mcup_0085 30S ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D Mcup_0074 30S ribosomal protein S25e K02975 RP-S25e; small subunit ribosomal protein S25e D Mcup_0362 30S ribosomal protein S26e K02976 RP-S26e; small subunit ribosomal protein S26e D Mcup_0432 SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e D Mcup_0027 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D Mcup_0507 30S ribosomal protein S30e K02983 RP-S30e; small subunit ribosomal protein S30e D Mcup_0594 50S ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Mcup_1964 50S ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Mcup_1967 50S ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Mcup_1954 50S ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Mcup_1951 50S ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Mcup_0593 acidic ribosomal protein P0 K02864 RP-L10; large subunit ribosomal protein L10 D Mcup_0595 50S ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Mcup_0592 50S ribosomal protein L12P K02869 RP-L12; large subunit ribosomal protein L12 D Mcup_0146 50S ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Mcup_1957 50S ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Mcup_1945 50S ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Mcup_1948 50S ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Mcup_1962 50S ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Mcup_1965 50S ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Mcup_1956 KOW domain-containing protein K02895 RP-L24; large subunit ribosomal protein L24 D Mcup_1960 50S ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Mcup_1946 50S ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Mcup_1966 50S ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e D Mcup_0156 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Mcup_0418 50S ribosomal protein L10e K02866 RP-L10e; large subunit ribosomal protein L10e D Mcup_0055 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D Mcup_1986 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D Mcup_0145 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D Mcup_1949 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D Mcup_1995 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D Mcup_0028 50S ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e D Mcup_0036 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e D Mcup_0602 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D Mcup_1950 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D Mcup_1997 50S ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D Mcup_1978 50S ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D Mcup_0603 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D Mcup_1870 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Mcup_0431 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D Mcup_0600 50S ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D Mcup_r0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Mcup_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Mcup_r0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:mcn00970] D Mcup_t0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Mcup_t0045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Mcup_t0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Mcup_t0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0008 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Mcup_t0004 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Mcup_t0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Mcup_t0021 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Mcup_t0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Mcup_t0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Mcup_t0013 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Mcup_t0034 tRNA-His K14226 tRNA-His; tRNA His D Mcup_t0015 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Mcup_t0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0032 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Mcup_t0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Mcup_t0033 tRNA-Met K14230 tRNA-Met; tRNA Met D Mcup_t0042 tRNA-Met K14230 tRNA-Met; tRNA Met D Mcup_t0019 tRNA-Met K14230 tRNA-Met; tRNA Met D Mcup_t0036 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Mcup_t0009 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Mcup_t0016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Mcup_t0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Mcup_t0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Mcup_t0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Mcup_t0010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Mcup_t0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Mcup_t0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Mcup_t0018 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Mcup_t0026 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Mcup_t0007 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Mcup_t0038 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Mcup_t0041 tRNA-Val K14237 tRNA-Val; tRNA Val D Mcup_t0043 tRNA-Val K14237 tRNA-Val; tRNA Val D Mcup_t0029 tRNA-Val K14237 tRNA-Val; tRNA Val D Mcup_0157 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Mcup_0489 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Mcup_1247 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Mcup_0024 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Mcup_0488 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Mcup_0508 glutamyl-tRNA(Gln) amidotransferase subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D Mcup_0509 glutamyl-tRNA(Gln) amidotransferase subunit E K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D Mcup_0591 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Mcup_1868 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Mcup_0093 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Mcup_0647 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Mcup_0332 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Mcup_0211 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Mcup_0372 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Mcup_0545 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Mcup_0344 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Mcup_1450 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Mcup_1969 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Mcup_0128 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Mcup_0513 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Mcup_0363 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Mcup_2014 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Mcup_0164 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Mcup_0165 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Mcup_0137 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Mcup_0110 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:mcn03060] D Mcup_1944 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Mcup_0471 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Mcup_0598 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Mcup_1900 signal recognition particle, subunit SRP19 (srp19) K03105 SRP19; signal recognition particle subunit SRP19 D Mcup_1267 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D Mcup_1268 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Mcup_1269 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Mcup_0562 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:mcn04122] D Mcup_1720 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Mcup_1703 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Mcup_0620 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Mcup_2008 conserved hypothetical protein K03636 moaD; sulfur-carrier protein D Mcup_1523 MoaD family protein K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12] D Mcup_0403 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Mcup_0249 putative molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Mcup_1552 molybdenum cofactor synthesis domain-containing protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Mcup_0819 thiamineS protein K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:mcn03050] D Mcup_2021 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit D Mcup_1983 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Mcup_0253 proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Mcup_2015 proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:mcn03018] D Mcup_0420 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4 D Mcup_1981 exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D Mcup_1979 exosome complex RNA-binding protein Rrp42 K12589 RRP42; exosome complex component RRP42 D Mcup_1980 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D Mcup_0560 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Mcup_0779 DEAD/DEAH box helicase domain-containing protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:mcn03030] D Mcup_0136 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Mcup_0063 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Mcup_1432 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Mcup_0135 DNA polymerase II K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Mcup_0794 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Mcup_0378 DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Mcup_0245 replicative DNA helicase Mcm K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Mcup_0440 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D Mcup_0373 DNA primase large subunit K18882 priL; DNA primase large subunit D Mcup_0050 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen D Mcup_0059 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen D Mcup_0441 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D Mcup_0251 replication factor C small subunit K04801 rfcS; replication factor C small subunit D Mcup_0250 replication factor C large subunit K04800 rfcL; replication factor C large subunit D Mcup_1860 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Mcup_1923 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:mcn03410] D Mcup_0177 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Mcup_0050 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen D Mcup_0059 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen D Mcup_0441 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D Mcup_1860 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Mcup_1923 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Mcup_0218 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Mcup_1377 uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Mcup_0795 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Mcup_1368 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] C 03420 Nucleotide excision repair [PATH:mcn03420] D Mcup_0416 DEAD_2 domain-containing protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Mcup_1975 ERCC4 domain-containing protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Mcup_0050 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen D Mcup_0059 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen D Mcup_0441 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D Mcup_1923 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:mcn03430] D Mcup_0050 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen D Mcup_0059 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen D Mcup_0441 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D Mcup_1923 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination C 03450 Non-homologous end-joining D Mcup_1860 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D Mcup_0596 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:mcn02010] D Mcup_1057 extracellular solute-binding protein family 1 K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D Mcup_1058 Sulfate ABC transporter, permease protein K15496 wtpB; molybdate/tungstate transport system permease protein D Mcup_0616 ABC transporter related protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D Mcup_1626 ABC transporter related bacterial G-3-P import K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Mcup_0957 extracellular solute-binding protein K17311 treS; trehalose transport system substrate-binding protein D Mcup_0958 binding-protein-dependent transport systems inner membrane component K17312 treT; trehalose transport system permease protein D Mcup_0959 binding-protein-dependent transport systems inner membrane component K17313 treU; trehalose transport system permease protein D Mcup_0960 ABC transporter related protein K17314 treV; trehalose transport system ATP-binding protein D Mcup_1049 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Mcup_1160 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:mcn03070] D Mcup_1944 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Mcup_0598 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Mcup_0471 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Mcup_1267 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D Mcup_1268 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Mcup_1269 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:mcn02020] D Mcup_1695 citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Mcup_1932 triphosphoribosyl-dephospho-CoA protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D Mcup_0031 malic enzyme (NAD+) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Mcup_0617 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1501 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:mcn02024] D Mcup_0541 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Mcup_0542 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Mcup_0614 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Mcup_1165 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Mcup_0105 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Mcup_1644 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Mcup_0851 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Mcup_0104 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Mcup_0103 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Mcup_1643 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Mcup_0852 ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Mcup_0853 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Mcup_0102 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Mcup_1642 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Mcup_1641 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Mcup_0101 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Mcup_1944 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Mcup_0598 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Mcup_0471 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Mcup_0560 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:mcn04980] D Mcup_0635 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Mcup_0345 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Mcup_0234 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:mcn01000] C 01001 Protein kinases [BR:mcn01001] D Mcup_0083 Mn2+-dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D Mcup_1439 non-specific serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Mcup_1839 protein of unknown function RIO1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:mcn01009] D Mcup_1435 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D Mcup_2004 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] C 01002 Peptidases and inhibitors [BR:mcn01002] D Mcup_0199 peptidase A24B, FlaK-like protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D Mcup_0869 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Mcup_1873 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Mcup_0303 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Mcup_0304 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Mcup_0627 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Mcup_1452 peptidase M1, membrane alanine aminopeptidase K13722 trf2_3; tricorn protease interacting factor F2/3 [EC:3.4.11.-] D Mcup_0162 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Mcup_0619 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Mcup_1884 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Mcup_1730 carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Mcup_1829 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Mcup_0904 peptidase S9 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D Mcup_0562 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Mcup_1983 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Mcup_0253 proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Mcup_2015 proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Mcup_1403 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Mcup_1828 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Mcup_0280 peptidase U62, modulator of DNA gyrase K03592 pmbA; PmbA protein D Mcup_1677 peptidase U62, modulator of DNA gyrase K03592 pmbA; PmbA protein D Mcup_0281 peptidase U62, modulator of DNA gyrase K03568 tldD; TldD protein D Mcup_1676 peptidase U62, modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:mcn01003] D Mcup_0155 glycosyl transferase family protein K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D Mcup_0430 oligosaccharyl transferase, STT3 subunit K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18] D Mcup_0460 conserved hypothetical protein K02359 EGH; beta-1,4-mannosyltransferase [EC:2.4.1.-] D Mcup_0818 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:mcn01011] D Mcup_1170 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 01004 Lipid biosynthesis proteins [BR:mcn01004] D Mcup_0467 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_0217 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_1181 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_1263 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Mcup_0880 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_1802 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0954 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Mcup_0836 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Mcup_0614 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Mcup_1165 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:mcn01006] D Mcup_0154 geranyltranstransferase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Mcup_1039 squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Mcup_0193 prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Mcup_0285 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:mcn01007] D Mcup_0157 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Mcup_0137 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Mcup_0110 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Mcup_0211 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Mcup_0513 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Mcup_0372 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Mcup_1969 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Mcup_0545 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Mcup_0344 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Mcup_1450 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Mcup_0128 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Mcup_1868 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Mcup_2014 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Mcup_0093 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Mcup_0332 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Mcup_0363 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Mcup_0647 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Mcup_0591 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Mcup_0164 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Mcup_0165 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Mcup_0544 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Mcup_0342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Mcup_1904 N2-acetyl-L-lysine aminotransferase / acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Mcup_1793 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Mcup_1856 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:mcn03000] D Mcup_2026 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Mcup_0499 transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Mcup_1406 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Mcup_1907 AsnC family transcriptional regulator K06154 lysM; Lrp/AsnC family transcriptional regulator, involved in the regulation of lysine biosynthesis D Mcup_1235 ferric uptake regulator family protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Mcup_1843 regulatory protein, ArsR K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D Mcup_0124 conserved hypothetical protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator D Mcup_0272 FeoA family protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Mcup_0225 iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Mcup_0277 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Mcup_0075 transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D Mcup_0784 molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein D Mcup_1149 CRISPR-associated DNA-binding protein K07725 csa3; CRISPR-associated protein Csa3 D Mcup_0503 helix-turn-helix domain-containing protein K07728 K07728; putative transcriptional regulator D Mcup_0632 putative pyruvate: ferredoxin oxidoreductase, gamma subunit,HTH motif protein K07731 K07731; putative transcriptional regulator D Mcup_0282 CopG family transcriptional regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Mcup_0881 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 03021 Transcription machinery [BR:mcn03021] D Mcup_0495 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D Mcup_0097 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D Mcup_0499 transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Mcup_2025 transcription factor IIE (TFIIE), alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D Mcup_0416 DEAD_2 domain-containing protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Mcup_0596 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 D Mcup_0442 GTPase K24104 GPN; GPN-loop GTPase D Mcup_0037 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA D Mcup_0034 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D Mcup_0035 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D Mcup_0033 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D Mcup_0144 DNA-directed RNA polymerase, subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D Mcup_0068 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D Mcup_1994 DNA-directed RNA polymerase, subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D Mcup_2016 conserved hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6] D Mcup_0032 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D Mcup_0421 DNA-directed RNA polymerase, subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D Mcup_0148 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D Mcup_0095 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D Mcup_0051 conserved hypothetical protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6] D Mcup_0423 DNA-directed RNA polymerase, subunit M K03057 tfs; transcription factor S D Mcup_0329 DNA-directed RNA polymerase, subunit M K03057 tfs; transcription factor S D Mcup_0422 conserved hypothetical protein K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:mcn03019] D Mcup_0596 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 D Mcup_1863 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D Mcup_0071 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D Mcup_0133 cell division protein pelota K06965 PELO; protein pelota D Mcup_1253 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D Mcup_1520 translation elongation factor 1A GTP binding subunit K03231 EEF1A; elongation factor 1-alpha D Mcup_0041 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D Mcup_0420 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4 D Mcup_1981 exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D Mcup_1980 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D Mcup_1979 exosome complex RNA-binding protein Rrp42 K12589 RRP42; exosome complex component RRP42 D Mcup_0779 DEAD/DEAH box helicase domain-containing protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Mcup_0560 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 03041 Spliceosome C 03011 Ribosome [BR:mcn03011] D Mcup_1989 30S ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D Mcup_1955 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D Mcup_0065 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D Mcup_1901 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D Mcup_2007 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D Mcup_0605 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D Mcup_0085 30S ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D Mcup_0074 30S ribosomal protein S25e K02975 RP-S25e; small subunit ribosomal protein S25e D Mcup_0362 30S ribosomal protein S26e K02976 RP-S26e; small subunit ribosomal protein S26e D Mcup_0432 SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e D Mcup_0027 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D Mcup_0507 30S ribosomal protein S30e K02983 RP-S30e; small subunit ribosomal protein S30e D Mcup_1966 50S ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e D Mcup_0156 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Mcup_0418 50S ribosomal protein L10e K02866 RP-L10e; large subunit ribosomal protein L10e D Mcup_0055 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D Mcup_1986 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D Mcup_0145 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D Mcup_1949 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D Mcup_1995 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D Mcup_0028 50S ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e D Mcup_0036 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e D Mcup_0602 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D Mcup_1950 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D Mcup_1997 50S ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D Mcup_1978 50S ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D Mcup_0603 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D Mcup_1870 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Mcup_0431 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D Mcup_0149 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Mcup_1961 30S ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Mcup_0142 30S ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Mcup_1947 30S ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Mcup_0040 30S ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Mcup_1952 30S ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Mcup_0147 30S ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Mcup_0042 30S ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Mcup_0143 30S ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Mcup_0038 30S ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Mcup_0141 30S ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Mcup_1953 30S ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Mcup_0062 30S ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Mcup_1958 30S ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Mcup_1963 30S ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Mcup_0594 50S ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Mcup_1964 50S ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Mcup_1967 50S ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Mcup_1954 50S ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Mcup_1951 50S ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Mcup_0593 acidic ribosomal protein P0 K02864 RP-L10; large subunit ribosomal protein L10 D Mcup_0595 50S ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Mcup_0146 50S ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Mcup_1957 50S ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Mcup_1945 50S ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Mcup_1948 50S ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Mcup_1962 50S ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Mcup_1965 50S ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Mcup_1956 KOW domain-containing protein K02895 RP-L24; large subunit ribosomal protein L24 D Mcup_1960 50S ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Mcup_1946 50S ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Mcup_0592 50S ribosomal protein L12P K02869 RP-L12; large subunit ribosomal protein L12 D Mcup_0600 50S ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D Mcup_r0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Mcup_r0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Mcup_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:mcn03009] D Mcup_0506 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56 D Mcup_0057 pseudouridine synthase (b subunit) K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D Mcup_0434 nucleolar RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D Mcup_1351 ribosome biogenesis protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D Mcup_1438 putative RNA-processing protein K06961 KRR1; ribosomal RNA assembly protein D Mcup_1439 non-specific serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Mcup_1839 protein of unknown function RIO1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D Mcup_0117 nucleotide kinase-like protein K18532 AK6; adenylate kinase [EC:2.7.4.3] D Mcup_2037 conserved hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D Mcup_2005 putative ATPase RIL K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D Mcup_0310 small GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein D Mcup_1959 ribonuclease P, Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Mcup_1984 ribonuclease P-related protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Mcup_0239 GTPase or GTP-binding protein-like protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D Mcup_0601 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6 D Mcup_1433 conserved hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3 D Mcup_1982 putative RNA-associated protein K14574 SDO1; ribosome maturation protein SDO1 D Mcup_1863 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D Mcup_0071 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D Mcup_0505 fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D Mcup_0156 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Mcup_0037 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA D Mcup_1992 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Mcup_0187 Fmu (Sun) domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Mcup_1457 Fmu (Sun) domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Mcup_0612 Fmu (Sun) domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Mcup_0058 rRNA methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Mcup_1927 SSU ribosomal protein S18P alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Mcup_0134 SSU ribosomal protein S18P alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Mcup_1410 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Mcup_0779 DEAD/DEAH box helicase domain-containing protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Mcup_2023 small GTP-binding protein K03665 hflX; GTPase D Mcup_0276 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Mcup_1353 hypothetical protein K07574 yhbY; RNA-binding protein D Mcup_1987 translation-associated GTPase K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:mcn03016] D Mcup_1959 ribonuclease P, Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Mcup_1984 ribonuclease P-related protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Mcup_1352 RNAse P, Rpr2/Rpp21 subunit K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D Mcup_0445 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Mcup_0477 conserved hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Mcup_1937 conserved hypothetical protein K24956 ZBTB8OS; protein archease D Mcup_1520 translation elongation factor 1A GTP binding subunit K03231 EEF1A; elongation factor 1-alpha D Mcup_0041 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D Mcup_0157 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Mcup_0363 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Mcup_1969 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Mcup_0344 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Mcup_1450 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Mcup_0372 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Mcup_0513 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Mcup_0128 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Mcup_0591 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Mcup_0093 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Mcup_0647 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Mcup_0332 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Mcup_0211 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Mcup_0545 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Mcup_2014 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Mcup_0164 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Mcup_0165 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Mcup_0137 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Mcup_0110 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Mcup_1228 conserved hypothetical protein K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Mcup_0108 Ala-tRNA(Pro) hydrolase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D Mcup_1371 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Mcup_1436 RNA modification protein K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D Mcup_0502 N(2),N(2)-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D Mcup_1499 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Mcup_1354 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Mcup_0077 tRNA (adenine-57, 58-N(1)-) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Mcup_0490 tRNA-modifying enzyme K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D Mcup_1867 tRNA pseudouridine synthase D, TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Mcup_0470 putative pseudouridylate synthase K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D Mcup_0083 Mn2+-dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D Mcup_0084 putative DNA-binding/iron metalloprotein/AP endonuclease K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D Mcup_0276 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Mcup_0247 conserved hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1 D Mcup_0449 tRNA CCA-pyrophosphorylase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D Mcup_2013 tRNA-splicing endonuclease subunit beta K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D Mcup_0089 tRNA-splicing endonuclease subunit alpha K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D Mcup_0448 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Mcup_1868 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Mcup_1990 tRNA/rRNA methyltransferase (SpoU) K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Mcup_0007 ribosomal RNA methyltransferase NOP2 K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D Mcup_0756 tRNA (guanine-N1-)-methyltransferase K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221] D Mcup_0444 putative RNA methylase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D Mcup_2024 conserved hypothetical protein K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D Mcup_0774 PP-loop domain-containing protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Mcup_1703 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Mcup_0664 ExsB family protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Mcup_1548 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Mcup_1474 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Mcup_0311 radical SAM domain-containing protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Mcup_2018 7-cyano-7-deazaguanine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D Mcup_2039 conserved hypothetical protein K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] D Mcup_1814 protein of unknown function DUF699, ATPase putative K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D Mcup_1825 protein of unknown function DUF699, ATPase putative K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] C 03012 Translation factors [BR:mcn03012] D Mcup_1440 translation initiation factor IF-1A K03236 EIF1A; translation initiation factor 1A D Mcup_0096 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D Mcup_0433 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1 D Mcup_1435 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D Mcup_0066 translation initiation factor IF-2 subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3 D Mcup_1172 translation initiation factor 2B subunit I K03239 EIF2B1; translation initiation factor eIF-2B subunit alpha D Mcup_0472 translation initiation factor IF-5A K03263 EIF5A; translation initiation factor 5A D Mcup_0030 translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B D Mcup_0601 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6 D Mcup_1520 translation elongation factor 1A GTP binding subunit K03231 EEF1A; elongation factor 1-alpha D Mcup_0041 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D Mcup_1864 elongation factor 1-beta K03232 EEF1B; elongation factor 1-beta D Mcup_1974 elongation factor EF-2 K03234 EEF2; elongation factor 2 D Mcup_0419 diphthamide biosynthesis protein K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D Mcup_0263 putative ATP binding protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D Mcup_1253 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D Mcup_1991 putative methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Mcup_1866 peptidyl-tRNA hydrolase K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:mcn03110] D Mcup_2011 thermosome K22447 cct; archaeal chaperonin D Mcup_0518 thermosome K22447 cct; archaeal chaperonin D Mcup_1518 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Mcup_0951 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Mcup_0599 prefoldin subunit alpha K04797 pfdA; prefoldin alpha subunit D Mcup_1976 prefoldin subunit beta K04798 pfdB; prefoldin beta subunit D Mcup_2003 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Mcup_1226 thioredoxin K03671 TXN; thioredoxin D Mcup_0615 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:mcn04131] D Mcup_0029 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Mcup_1863 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D Mcup_0071 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D Mcup_0823 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Mcup_1520 translation elongation factor 1A GTP binding subunit K03231 EEF1A; elongation factor 1-alpha D Mcup_0041 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:mcn04121] D Mcup_1870 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Mcup_0507 30S ribosomal protein S30e K02983 RP-S30e; small subunit ribosomal protein S30e C 03051 Proteasome [BR:mcn03051] D Mcup_1983 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Mcup_0253 proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Mcup_2015 proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Mcup_2021 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:mcn03032] D Mcup_0063 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Mcup_0050 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen D Mcup_0059 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen D Mcup_0441 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D Mcup_1860 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Mcup_1923 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Mcup_2026 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Mcup_0434 nucleolar RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D Mcup_0057 pseudouridine synthase (b subunit) K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D Mcup_1975 ERCC4 domain-containing protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Mcup_0136 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Mcup_0001 ORC complex protein Cdc6/Orc1 K10725 cdc6A; archaeal cell division control protein 6 D Mcup_0248 cell division control protein 6 K10725 cdc6A; archaeal cell division control protein 6 D Mcup_1419 AAA ATPase K10725 cdc6A; archaeal cell division control protein 6 D Mcup_0245 replicative DNA helicase Mcm K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Mcup_0440 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D Mcup_0373 DNA primase large subunit K18882 priL; DNA primase large subunit D Mcup_0246 conserved hypothetical protein K09723 ginS; DNA replication factor GINS D Mcup_1432 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Mcup_0135 DNA polymerase II K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Mcup_0794 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Mcup_0378 DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Mcup_0250 replication factor C large subunit K04800 rfcL; replication factor C large subunit D Mcup_0251 replication factor C small subunit K04801 rfcS; replication factor C small subunit D Mcup_0474 DNA topoisomerase VI subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D Mcup_0475 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D Mcup_1313 DNA topoisomerase type IA central domain-containing protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D Mcup_0481 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] D Mcup_0072 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:mcn03036] D Mcup_2026 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Mcup_1968 conserved hypothetical protein K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D Mcup_1541 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Mcup_1838 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Mcup_1206 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D Mcup_0610 phage integrase family protein K04763 xerD; integrase/recombinase XerD D Mcup_0116 chromosome partitioning ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:mcn03400] D Mcup_0646 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Mcup_1648 deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Mcup_0177 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Mcup_0050 DNA polymerase sliding clamp subunit B K04802 PCNA; proliferating cell nuclear antigen D Mcup_0059 DNA polymerase sliding clamp subunit A K04802 PCNA; proliferating cell nuclear antigen D Mcup_0441 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D Mcup_1860 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Mcup_1923 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Mcup_0416 DEAD_2 domain-containing protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Mcup_1975 ERCC4 domain-containing protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Mcup_0212 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Mcup_0218 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Mcup_1377 uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Mcup_0795 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Mcup_1368 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Mcup_0867 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Mcup_1240 SMC domain-containing protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Mcup_1241 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Mcup_1102 CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1 D Mcup_0009 DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA D Mcup_0358 holliday junction resolvase K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D Mcup_1202 holliday junction resolvase K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D Mcup_1242 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D Mcup_1239 conserved hypothetical protein K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-] D Mcup_0860 DEAD/DEAH box helicase domain-containing protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D Mcup_0855 DEAD/DEAH box helicase domain-containing protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D Mcup_1505 DNA polymerase IV K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] D Mcup_0054 DEAD/DEAH box helicase domain-containing protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Mcup_0479 DEAD/DEAH box helicase domain-containing protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Mcup_0174 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Mcup_0512 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Mcup_0892 conserved hypothetical protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Mcup_0525 conserved hypothetical protein K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:mcn03029] D Mcup_1959 ribonuclease P, Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Mcup_1984 ribonuclease P-related protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Mcup_0137 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Mcup_0344 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Mcup_1450 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Mcup_0093 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Mcup_0513 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Mcup_0489 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Mcup_1247 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Mcup_0024 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Mcup_0488 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Mcup_0116 chromosome partitioning ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D Mcup_0285 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:mcn02000] D Mcup_1057 extracellular solute-binding protein family 1 K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D Mcup_1058 Sulfate ABC transporter, permease protein K15496 wtpB; molybdate/tungstate transport system permease protein D Mcup_0616 ABC transporter related protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D Mcup_0857 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Mcup_0856 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Mcup_1626 ABC transporter related bacterial G-3-P import K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Mcup_0957 extracellular solute-binding protein K17311 treS; trehalose transport system substrate-binding protein D Mcup_0958 binding-protein-dependent transport systems inner membrane component K17312 treT; trehalose transport system permease protein D Mcup_0959 binding-protein-dependent transport systems inner membrane component K17313 treU; trehalose transport system permease protein D Mcup_0960 ABC transporter related protein K17314 treV; trehalose transport system ATP-binding protein D Mcup_1627 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Mcup_1625 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Mcup_0105 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Mcup_1644 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Mcup_0851 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Mcup_0104 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Mcup_0103 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Mcup_1643 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Mcup_0852 ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Mcup_0853 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Mcup_0102 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Mcup_1642 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Mcup_1641 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Mcup_0101 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Mcup_0196 ABC-type Fe3+-hydroxamate transport system periplasmic component-like protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Mcup_1284 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Mcup_1283 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Mcup_1282 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Mcup_1049 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Mcup_1160 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Mcup_1161 ABC transporter related protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Mcup_1050 ABC transporter related protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Mcup_1574 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Mcup_1485 ABC-type Na+ efflux pump permease component-like protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Mcup_1727 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Mcup_1340 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Mcup_1443 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Mcup_1820 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Mcup_0987 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Mcup_0999 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Mcup_1573 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Mcup_1486 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Mcup_1726 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Mcup_1339 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Mcup_1444 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Mcup_1819 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Mcup_0710 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D Mcup_0708 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Mcup_0570 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Mcup_1006 sugar proton symporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D Mcup_1323 major facilitator transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Mcup_0975 major facilitator transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Mcup_0725 general substrate transporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter D Mcup_1048 general substrate transporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter D Mcup_1667 major facilitator transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Mcup_1337 general substrate transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D Mcup_0945 general substrate transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D Mcup_0458 major facilitator transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Mcup_1623 sugar transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Mcup_1669 major facilitator transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Mcup_1189 major facilitator transporter organic substrates K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Mcup_0692 ammonium transporter K03320 amt; ammonium transporter, Amt family D Mcup_0778 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog D Mcup_0850 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog D Mcup_1218 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Mcup_1005 protein of unknown function DUF6 transmembrane K15269 pecM; probable blue pigment (indigoidine) exporter D Mcup_0691 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Mcup_1764 conserved hypothetical protein K07301 yrbG; cation:H+ antiporter D Mcup_1173 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter D Mcup_0737 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter D Mcup_1719 Cl-channel, voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D Mcup_1075 high-affinity nickel-transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D Mcup_2000 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein D Mcup_1463 conserved hypothetical protein K22736 VIT; vacuolar iron transporter family protein D Mcup_1572 conserved hypothetical protein K22736 VIT; vacuolar iron transporter family protein D Mcup_0327 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Mcup_1604 conserved hypothetical protein K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1] D Mcup_1611 conserved hypothetical protein K08356 aoxB; arsenite oxidase large subunit [EC:1.20.2.1 1.20.9.1] D Mcup_1911 conserved hypothetical protein K25503 cedB; DNA import protein CedB D Mcup_1939 conserved hypothetical protein K25504 cedA; DNA import protein CedA D Mcup_1940 conserved hypothetical protein K25505 cedA1; DNA import protein CedA1 C 02044 Secretion system [BR:mcn02044] D Mcup_0183 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Mcup_1528 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Mcup_1529 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ D Mcup_0182 conserved hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D Mcup_0199 peptidase A24B, FlaK-like protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D Mcup_1944 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Mcup_0471 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Mcup_0598 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Mcup_1900 signal recognition particle, subunit SRP19 (srp19) K03105 SRP19; signal recognition particle subunit SRP19 D Mcup_1267 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D Mcup_1268 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA D Mcup_1269 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:mcn02042] C 02022 Two-component system C 02035 Bacterial motility proteins [BR:mcn02035] D Mcup_0183 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Mcup_1528 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Mcup_1529 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ D Mcup_0182 conserved hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D Mcup_0199 peptidase A24B, FlaK-like protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:mcn04812] D Mcup_0150 conserved hypothetical protein K06990 MEMO1; MEMO1 family protein D Mcup_1541 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Mcup_1838 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Mcup_1206 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:mcn04147] D Mcup_0560 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Mcup_0576 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Mcup_0823 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Mcup_0713 putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Mcup_1520 translation elongation factor 1A GTP binding subunit K03231 EEF1A; elongation factor 1-alpha D Mcup_0041 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D Mcup_1974 elongation factor EF-2 K03234 EEF2; elongation factor 2 D Mcup_1860 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Mcup_1863 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D Mcup_0071 AAA family ATPase, CDC48 subfamily protein K13525 VCP; transitional endoplasmic reticulum ATPase D Mcup_1371 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Mcup_0614 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Mcup_1165 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Mcup_1683 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1798 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1799 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1437 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_1691 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0582 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_0956 acetoacetyl-CoA beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Mcup_2004 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Mcup_1943 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Mcup_0298 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Mcup_0299 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Mcup_0617 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1501 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Mcup_1857 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Mcup_1418 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Mcup_0553 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Mcup_0313 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0278 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_0680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1163 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Mcup_1737 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Mcup_1026 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Mcup_0214 Glu/Leu/Phe/Val dehydrogenase, C terminal protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Mcup_0783 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:mcn02048] D Mcup_1102 CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1 D Mcup_1103 CRISPR-associated Cas2 family protein K09951 cas2; CRISPR-associated protein Cas2 D Mcup_1153 CRISPR-associated helicase Cas3 family protein protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Mcup_1154 CRISPR-associated HD domain-containing protein K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-] D Mcup_1105 CRISPR-associated RAMP Csa1 family protein K19085 csa1; CRISPR-associated protein Csa1 D Mcup_1151 CRISPR-associated autoregulator DevR family protein protein K19074 csa2; CRISPR-associated protein Csa2 D Mcup_1149 CRISPR-associated DNA-binding protein K07725 csa3; CRISPR-associated protein Csa3 D Mcup_1106 conserved hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Mcup_1709 conserved hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Mcup_1152 CRISPR-associated Cas5 family protein K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D Mcup_1144 CRISPR-associated Csx7 family protein K09002 csm3; CRISPR-associated protein Csm3 D Mcup_1052 CRISPR-associated protein, MJ1666 family K19143 csx1; CRISPR-associated protein Csx1 D Mcup_1155 conserved hypothetical protein K19146 csaX; CRISPR-associated protein CsaX D Mcup_2026 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Mcup_0076 CopG/Arc/MetJ family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4 D Mcup_0157 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Mcup_1358 nucleic acid binding protein K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:mcn04090] C 01504 Antimicrobial resistance genes [BR:mcn01504] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:mcn03100] D Mcup_t0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Mcup_t0045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Mcup_t0024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Mcup_t0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Mcup_t0008 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Mcup_t0004 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Mcup_t0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Mcup_t0021 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Mcup_t0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Mcup_t0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Mcup_t0013 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Mcup_t0034 tRNA-His K14226 tRNA-His; tRNA His D Mcup_t0015 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Mcup_t0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Mcup_t0032 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Mcup_t0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Mcup_t0033 tRNA-Met K14230 tRNA-Met; tRNA Met D Mcup_t0042 tRNA-Met K14230 tRNA-Met; tRNA Met D Mcup_t0019 tRNA-Met K14230 tRNA-Met; tRNA Met D Mcup_t0036 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Mcup_t0009 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Mcup_t0016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Mcup_t0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Mcup_t0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Mcup_t0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Mcup_t0010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Mcup_t0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Mcup_t0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Mcup_t0018 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Mcup_t0026 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Mcup_t0007 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Mcup_t0038 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Mcup_t0041 tRNA-Val K14237 tRNA-Val; tRNA Val D Mcup_t0043 tRNA-Val K14237 tRNA-Val; tRNA Val D Mcup_t0029 tRNA-Val K14237 tRNA-Val; tRNA Val D Mcup_r0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Mcup_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Mcup_r0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Mcup_1492 2Fe-2S iron-sulfur cluster binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Mcup_1493 molybdopterin dehydrogenase, FAD-binding protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D Mcup_1257 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D Mcup_1567 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D Mcup_1791 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D Mcup_1879 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D Mcup_0979 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D Mcup_0633 putative pyruvate: ferredoxin oxidoreductase, alpha- and delta subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Mcup_0634 putative pyruvate: ferredoxin oxidoreductase, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Mcup_1797 acyl-CoA dehydrogenase domain-containing protein K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D Mcup_1736 FAD dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D Mcup_1025 FAD dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D Mcup_0209 NADPH:sulfur oxidoreductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18] D Mcup_1430 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Mcup_1245 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Mcup_0894 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Mcup_1717 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25] D Mcup_1810 pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Mcup_1326 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D Mcup_1355 Thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Mcup_0020 radical SAM domain-containing protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D Mcup_0288 radical SAM domain-containing protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Mcup_0805 hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Mcup_0803 hydrogenase 4 membrane component (E)-like protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D Mcup_0808 hydrogenase 4 subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D Mcup_0127 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Mcup_0493 diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98] D Mcup_0476 putative deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D Mcup_0374 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D Mcup_1168 conserved hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Mcup_0884 thioesterase-like protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Mcup_1196 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Mcup_0259 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Mcup_0452 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Mcup_1453 conserved hypothetical protein K16640 ssh7; DNA-binding protein 7 [EC:3.1.27.-] D Mcup_0552 N-glycosylase/DNA lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Mcup_0832 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Mcup_1386 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Mcup_0005 conserved hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Mcup_1244 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Mcup_1503 RNA 3'-terminal-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] C 99981 Carbohydrate metabolism D Mcup_1562 histone deacetylase superfamily protein K04768 acuC; acetoin utilization protein AcuC D Mcup_0675 histone deacetylase superfamily protein K04768 acuC; acetoin utilization protein AcuC D Mcup_0753 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D Mcup_0889 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D Mcup_0256 cytochrome c oxidase, subunit I K16933 doxB; heme bearing subunit I of the terminal oxidase D Mcup_0257 conserved hypothetical protein K16934 doxC; terminal oxidase subunit D Mcup_0258 conserved hypothetical protein K16935 doxE; terminal oxidase small hydrophobic subunit D Mcup_1738 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Mcup_1024 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K03855 fixX; ferredoxin like protein D Mcup_1735 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K03855 fixX; ferredoxin like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism D Mcup_0266 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Mcup_2022 XRE family transcriptional regulator K03627 MBF1; putative transcription factor D Mcup_0482 DNA/RNA-binding protein albA K03622 ssh10b; archaea-specific DNA-binding protein D Mcup_0480 Alba, DNA/RNA-binding protein K03622 ssh10b; archaea-specific DNA-binding protein D Mcup_1996 like-Sm ribonucleoprotein, core K04796 RUXX; small nuclear ribonucleoprotein D Mcup_1842 Sm-like ribonucleoprotein, core K04796 RUXX; small nuclear ribonucleoprotein D Mcup_0173 signal transduction protein K07744 K07744; transcriptional regulator C 99974 Translation D Mcup_1993 conserved hypothetical protein K07572 K07572; putative nucleotide binding protein D Mcup_0630 beta-lactamase domain-containing protein K07577 K07577; putative mRNA 3-end processing factor D Mcup_1924 RNA procession exonuclease-like protein K07577 K07577; putative mRNA 3-end processing factor D Mcup_1366 methyltransferase K07579 K07579; putative methylase D Mcup_1865 conserved hypothetical protein K07580 K07580; Zn-ribbon RNA-binding protein D Mcup_1985 conserved hypothetical protein K07581 K07581; RNA-binding protein C 99975 Protein processing D Mcup_0915 urease accessory protein UreF K03188 ureF; urease accessory protein D Mcup_0914 urease accessory protein UreG K03189 ureG; urease accessory protein D Mcup_1208 AIR synthase-like protein K04655 hypE; hydrogenase expression/formation protein HypE D Mcup_0140 AIR synthase-like protein K07388 K07388; hydrogenase expression/formation protein D Mcup_2020 PUA domain-containing protein K07398 K07398; conserved protein with predicted RNA binding PUA domain D Mcup_1447 putative selenoprotein K07401 K07401; selenoprotein W-related protein D Mcup_0848 xanthine and Co dehydrogenase maturation factor K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Mcup_0649 DNA-3-methyladenine glycosylase III K07457 K07457; endonuclease III related protein D Mcup_1507 TBP-interacting protein TIP49 K07472 TIP49; TBP-interacting protein D Mcup_0294 haloacid dehalogenase superfamily protein K07477 K07477; translin D Mcup_1885 transposase, IS605 orfB K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Mcup_0781 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D Mcup_1732 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D Mcup_0450 Ser/Thr protein kinase-like protein K07176 K07176; putative serine/threonine protein kinase D Mcup_0604 conserved hypothetical protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins C 99994 Others D Mcup_0487 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D Mcup_0359 ATPase K06865 K06865; ATPase D Mcup_1519 ZPR1-related zinc finger protein K06874 K06874; zinc finger protein D Mcup_1549 DEAD/DEAH box helicase domain-containing protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Mcup_0309 methionyl-tRNA synthetase, beta subunit K06878 K06878; tRNA-binding protein D Mcup_0123 RND superfamily drug efflux protein K06994 K06994; putative drug exporter of the RND superfamily D Mcup_1018 RND superfamily drug efflux protein K06994 K06994; putative drug exporter of the RND superfamily D Mcup_0726 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Mcup_1365 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Mcup_1973 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Mcup_0571 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D Mcup_0238 conserved hypothetical protein K07143 K07143; UPF0148 protein D Mcup_0690 conserved hypothetical protein K00389 yidH; putative membrane protein D Mcup_0498 conserved hypothetical protein K08975 K08975; putative membrane protein D Mcup_1398 conserved hypothetical protein K08979 K08979; putative membrane protein D Mcup_0991 conserved hypothetical protein K08980 K08980; putative membrane protein C 99997 Function unknown D Mcup_0567 conserved hypothetical protein K06869 K06869; uncharacterized protein D Mcup_2019 conserved hypothetical protein K06869 K06869; uncharacterized protein D Mcup_1581 radical SAM domain-containing protein K06871 K06871; uncharacterized protein D Mcup_0159 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Mcup_0655 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Mcup_1262 conserved hypothetical protein K06888 K06888; uncharacterized protein D Mcup_0669 CoA-binding domain-containing protein K06929 K06929; uncharacterized protein D Mcup_0494 phosphoesterase, putative K06953 K06953; uncharacterized protein D Mcup_1462 conserved hypothetical protein K07022 K07022; uncharacterized protein D Mcup_0572 SufBD protein K07033 K07033; uncharacterized protein D Mcup_2001 beta-lactamase domain-containing protein K07041 K07041; uncharacterized protein D Mcup_1195 amidohydrolase 2 K07045 K07045; uncharacterized protein D Mcup_0581 conserved hypothetical protein K07068 K07068; uncharacterized protein D Mcup_1682 conserved hypothetical protein K07068 K07068; uncharacterized protein D Mcup_1800 conserved hypothetical protein K07068 K07068; uncharacterized protein D Mcup_1801 conserved hypothetical protein K07068 K07068; uncharacterized protein D Mcup_1179 conserved hypothetical protein K07068 K07068; uncharacterized protein D Mcup_1690 conserved hypothetical protein K07068 K07068; uncharacterized protein D Mcup_0955 hypothetical protein K07068 K07068; uncharacterized protein D Mcup_0130 nucleotidyltransferase-like protein K07073 K07073; uncharacterized protein D Mcup_0223 conserved hypothetical protein K07090 K07090; uncharacterized protein D Mcup_1252 Predicted permease K07090 K07090; uncharacterized protein D Mcup_1533 conserved hypothetical protein K07090 K07090; uncharacterized protein D Mcup_0625 peroxiredoxins-like protein K07092 K07092; uncharacterized protein D Mcup_0681 DsrE family protein K07092 K07092; uncharacterized protein D Mcup_1706 peroxiredoxins-like protein K07092 K07092; uncharacterized protein D Mcup_1230 metallophosphoesterase K07096 K07096; uncharacterized protein D Mcup_0712 DHH superfamily phosphohydrolase K07097 K07097; uncharacterized protein D Mcup_1254 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Mcup_1515 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Mcup_0511 conserved hypothetical protein K07108 K07108; uncharacterized protein D Mcup_0825 transcriptional regulator-like protein K07108 K07108; uncharacterized protein D Mcup_1060 membrane spanning protein K07112 K07112; uncharacterized protein D Mcup_1061 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein D Mcup_1704 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein D Mcup_0453 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein D Mcup_0132 radical SAM domain-containing protein K07129 K07129; uncharacterized protein D Mcup_0014 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Mcup_0067 PilT domain-containing protein K07158 K07158; uncharacterized protein D Mcup_0715 conserved hypothetical protein K09003 K09003; uncharacterized protein D Mcup_0002 conserved hypothetical protein K09120 K09120; uncharacterized protein D Mcup_1918 conserved hypothetical protein K09122 K09122; uncharacterized protein D Mcup_0289 conserved hypothetical protein K09129 K09129; uncharacterized protein D Mcup_1919 AMMECR1 domain-containing protein K09141 K09141; uncharacterized protein D Mcup_1434 conserved hypothetical protein K09148 K09148; uncharacterized protein D Mcup_1175 conserved hypothetical protein K09149 K09149; uncharacterized protein D Mcup_1840 conserved hypothetical protein K09150 K09150; uncharacterized protein D Mcup_1731 conserved hypothetical protein K09157 K09157; uncharacterized protein D Mcup_0608 conserved hypothetical protein K09157 K09157; uncharacterized protein D Mcup_1522 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein D Mcup_1933 conserved hypothetical protein K09717 K09717; uncharacterized protein D Mcup_0237 conserved hypothetical protein K09721 K09721; uncharacterized protein D Mcup_0347 conserved hypothetical protein K09732 K09732; uncharacterized protein D Mcup_0446 conserved hypothetical protein K09736 K09736; uncharacterized protein D Mcup_0504 conserved hypothetical protein K09737 K09737; uncharacterized protein D Mcup_1460 conserved hypothetical protein K09744 K09744; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024