+D
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Transfer RNA Biogenesis - Mus musculus (house mouse)
%
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D 67724 Pop1; processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 66161 Pop4; processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 117109 Pop5; processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 54364 Rpp30; ribonuclease P/MRP 30 subunit K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 67676 Rpp21; ribonuclease P 21 subunit K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D 67053 Rpp14; ribonuclease P 14 subunit K14529 RPP14; ribonuclease P protein subunit RPP14 [EC:3.1.26.5]
D 74097 Pop7; processing of precursor 7, ribonuclease P family, (S. cerevisiae) K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
D 102614 Rpp25; ribonuclease P/MRP 25 subunit K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 69961 Rpp25l; ribonuclease P/MRP 25 subunit-like K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 227522 Rpp38; ribonuclease P/MRP 38 subunit K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
D 208366 Rpp40; ribonuclease P 40 subunit K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D 68626 Elac2; elaC ribonuclease Z 2 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 114615 Elac1; elaC ribonuclease Z 1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 100037283 Rnaset2a; ribonuclease T2A K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 68195 Rnaset2b; ribonuclease T2B K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 71799 Ptcd1; pentatricopeptide repeat domain 1 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
D 70047 Trnt1; tRNA nucleotidyl transferase, CCA-adding, 1 K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
D 381802 Tsen2; tRNA splicing endonuclease subunit 2 K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 66078 Tsen34; tRNA splicing endonuclease subunit 34 K15323 TSEN34; tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
D 66637 Tsen15; tRNA splicing endonuclease subunit 15 K15324 TSEN15; tRNA-splicing endonuclease subunit Sen15
D 76265 Tsen54; tRNA splicing endonuclease subunit 54 K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
C tRNA splicing ligase complex
D 28088 Rtcb; RNA 2',3'-cyclic phosphate and 5'-OH ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D 98404 expressed sequence AI597479 K15432 ASW; ashwin
D 68045 Rtraf; RNA transcription, translation and transport factor K15433 CGI99; RLL motif containing protein 1
D 68215 Fam98b; family with sequence similarity 98, member B K15434 FAM98B; protein FAM98B
D 104721 Ddx1; DEAD box helicase 1 K13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
D 67106 Zbtb8os; zinc finger and BTB domain containing 8 opposite strand K24956 ZBTB8OS; protein archease
C Other tRNA splicing factors
D 107328 Trpt1; tRNA phosphotransferase 1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
B tRNA transport factors
C tRNA export factors
D 19384 Ran; RAN, member RAS oncogene family K07936 RAN; GTP-binding nuclear protein Ran
D 19428 Rasl2-9; RAS-like, family 2, locus 9 K07936 RAN; GTP-binding nuclear protein Ran
D 75471 1700009N14Rik; RIKEN cDNA 1700009N14 gene K07936 RAN; GTP-binding nuclear protein Ran
D 73192 Xpot; exportin, tRNA (nuclear export receptor for tRNAs) K14288 XPOT; exportin-T
D 103573 Xpo1; exportin 1 K14290 XPO1; exportin-1
D 72322 Xpo5; exportin 5 K14289 XPO5; exportin-5
D 13628 Eef1a2; eukaryotic translation elongation factor 1 alpha 2 K03231 EEF1A; elongation factor 1-alpha
D 13627 Eef1a1; eukaryotic translation elongation factor 1 alpha 1 K03231 EEF1A; elongation factor 1-alpha
D 78891 Scyl1; SCY1-like 1 (S. cerevisiae) K08876 SCYL1; SCY1-like protein 1
D 14904 Gtpbp1; GTP binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C tRNA import factors
D 320938 Tnpo3; transportin 3 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 107508 Eprs1; glutamyl-prolyl-tRNA synthetase 1 K14163 EPRS; bifunctional glutamyl/prolyl-tRNA synthetase [EC:6.1.1.17 6.1.1.15]
D 67417 Ears2; glutamyl-tRNA synthetase 2, mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 230577 Pars2; prolyl-tRNA synthetase (mitochondrial)(putative) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 105148 Iars1; isoleucyl-tRNA synthetase 1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 381314 Iars2; isoleucine-tRNA synthetase 2, mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 102436 Lars2; leucyl-tRNA synthetase, mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 107045 Lars1; leucyl-tRNA synthetase 1 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 216443 Mars1; methionine-tRNA synthetase 1 K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 212679 Mars2; methionine-tRNA synthetase 2 (mitochondrial) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 97541 Qars1; glutaminyl-tRNA synthetase 1 K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 104458 Rars1; arginyl-tRNA synthetase 1 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 109093 Rars2; arginyl-tRNA synthetase 2, mitochondrial K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 85305 Kars1; lysyl-tRNA synthetase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 226414 Dars1; aspartyl-tRNA synthetase 1 K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 226539 Dars2; aspartyl-tRNA synthetase 2 (mitochondrial) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 13722 Aimp1; aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
D 231872 Aimp2; aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 K15438 AIMP2; aminoacyl tRNA synthase complex-interacting multifunctional protein 2
D 66143 Eef1e1; eukaryotic translation elongation factor 1 epsilon 1 K15439 EEF1E1; eukaryotic translation elongation factor 1 epsilon-1
C Other AARSs
D 234734 Aars1; alanyl-tRNA synthetase 1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 224805 Aars2; alanyl-tRNA synthetase 2, mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 70223 Nars1; asparaginyl-tRNA synthetase 1 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 244141 Nars2; asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 353172 Gars1; glycyl-tRNA synthetase 1 K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 110960 Tars1; threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 272396 Tars3; threonyl-tRNA synthetase 3 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 71807 Tars2; threonyl-tRNA synthetase 2, mitochondrial (putative) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 71984 Sars2; seryl-aminoacyl-tRNA synthetase 2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 20226 Sars1; seryl-tRNA synthetase 1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 27267 Cars1; cysteinyl-tRNA synthetase 1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 71941 Cars2; cysteinyl-tRNA synthetase 2, mitochondrial K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 22321 Vars1; valyl-tRNA synthetase 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 68915 Vars2; valyl-tRNA synthetase 2, mitochondrial K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 15115 Hars1; histidyl-tRNA synthetase 1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 70791 Hars2; histidyl-tRNA synthetase 2 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 69955 Fars2; phenylalanine-tRNA synthetase 2, mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 66590 Farsa; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 23874 Farsb; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 107271 Yars1; tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 70120 Yars2; tyrosyl-tRNA synthetase 2 (mitochondrial) K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 22375 Wars1; tryptophanyl-tRNA synthetase1 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 70560 Wars2; tryptophanyl tRNA synthetase 2 (mitochondrial) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D 66044 Dtd1; D-tyrosyl-tRNA deacylase 1 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 328092 Dtd2; D-tyrosyl-tRNA deacylase 2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 69684 Aarsd1; alanyl-tRNA synthetase domain containing 1 K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
C AARS associated factors
D 71787 Trnau1ap; tRNA selenocysteine 1 associated protein 1 K25102 TRNAU1AP; tRNA selenocysteine 1-associated protein 1
D 15254 Hint1; histidine triad nucleotide binding protein 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 68917 Hint2; histidine triad nucleotide binding protein 2 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 66847 Hint3; histidine triad nucleotide binding protein 3 K12150 HINT3; adenosine 5'-monophosphoramidase HINT3 [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
D 30947 Adat1; adenosine deaminase, tRNA-specific 1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 66757 Adat2; adenosine deaminase, tRNA-specific 2 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 100113398 Adat3; adenosine deaminase, tRNA-specific 3 K15442 TAD3; tRNA-specific adenosine deaminase 3
C Dihydorouridine synthases
D 68730 Dus1l; dihydrouridine synthase 1 like K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 66369 Dus2; dihydrouridine synthase 2 K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D 224907 Dus3l; dihydrouridine synthase 3 like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
D 71916 Dus4l; dihydrouridine synthase 4 like K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
C Methylthiotransferase
D 68916 Cdkal1; CDK5 regulatory subunit associated protein 1-like 1 K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
C Methyltransferases
D 212528 Trmt1; tRNA methyltransferase 1 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 15547 Trmt2a; TRM2 tRNA methyltransferase 2A K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 215201 Trmt2b; TRM2 tRNA methyltransferase 2B K15331 TRMT2B; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D 212728 Tarbp1; TAR RNA binding protein 1 K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
D 28114 Nsun2; NOL1/NOP2/Sun domain family member 2 K15335 NSUN2; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203]
D 106338 Nsun3; NOL1/NOP2/Sun domain family member 3 K21969 NSUN3; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.-]
D 74455 Nsun6; NOL1/NOP2/Sun domain family member 6 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 76357 Trmt5; TRM5 tRNA methyltransferase 5 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 328162 Trmt61a; tRNA methyltransferase 61A K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 66926 Trmt6; tRNA methyltransferase 6 K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 54632 Ftsj1; FtsJ RNA 2'-O-methyltransferase 1 K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 17299 Mettl1; methyltransferase 1, tRNA methylguanosine K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 52686 Mettl2; methyltransferase 2, methylcytidine K24974 METTL2; tRNA N(3)-methylcytidine methyltransferase METTL2 [EC:2.1.1.-]
D 67011 Mettl6; methyltransferase 6, methylcytidine K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 67667 Alkbh8; alkB homolog 8, tRNA methyltransferase K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 108943 Trmt10a; tRNA methyltransferase 10A K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 69934 Trmt10b; tRNA methyltransferase 10B K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 73681 Trmt11; tRNA methyltransferase 11 K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 229780 Trmt13; tRNA methyltransferase 13 K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D 78890 Trmt44; tRNA methyltransferase 44 K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211]
D 57773 Wdr4; WD repeat domain 4 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 67674 Trmt112; tRNA methyltransferase 11-2 K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 13434 Trdmt1; tRNA aspartic acid methyltransferase 1 K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 74753 Trmo; tRNA methyltransferase O K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 100929 Tyw1; tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D 68260 Trmt12; tRNA methyltransferase 12 K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D 209584 Tyw3; tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D 329504 Lcmt2; leucine carboxyl methyltransferase 2 K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
D 68736 Tyw5; tRNA-yW synthesizing protein 5 K18066 TYW5; tRNA wybutosine-synthesizing protein 5 [EC:1.14.11.42]
D 75284 Bcdin3d; BCDIN3 domain containing K25191 BCDIN3D; RNA 5'-monophosphate methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D 56361 Pus1; pseudouridine synthase 1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 67049 Pus3; pseudouridine synthase 3 K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D 72133 Trub1; TruB pseudouridine (psi) synthase family member 1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 78895 Pus7l; pseudouridylate synthase 7-like K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 78697 Pus7; pseudouridylate synthase 7 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 74467 Pus10; pseudouridylate synthase 10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D 71989 Rpusd4; RNA pseudouridylate synthase domain containing 4 K22538 RPUSD4; mitochondrial RNA pseudouridine synthase RPUSD4 [EC:5.4.99.-]
C Thiolation factors
D 72026 Trmu; tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 233189 Ctu1; cytosolic thiouridylase subunit 1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 66965 Ctu2; cytosolic thiouridylase subunit 2 K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
D 18041 Nfs1; nitrogen fixation gene 1 (S. cerevisiae) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 68205 Urm1; ubiquitin related modifier 1 K12161 URM1; ubiquitin related modifier 1
D 69372 Mocs3; molybdenum cofactor synthesis 3 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D 76367 Trp53rkb; transformation related protein 53 regulating kinase B K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 381406 Trp53rka; transformation related protein 53 regulating kinase A K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 72085 Osgepl1; O-sialoglycoprotein endopeptidase-like 1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 66246 Osgep; O-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 69786 Tprkb; Tp53rk binding protein K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 66192 Lage3; L antigen family, member 3 K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
D 100233175 Gon7; GON7 subunit of KEOPS complex K15903 GON7; EKC/KEOPS complex subunit GON7
C Elongator complex
D 230233 Elp1; elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 58523 Elp2; elongator acetyltransferase complex subunit 2 K11374 ELP2; elongator complex protein 2
D 74195 Elp3; elongator acetyltransferase complex subunit 3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D 77766 Elp4; elongator acetyltransferase complex subunit 4 K11375 ELP4; elongator complex protein 4
D 54351 Elp5; elongator acetyltransferase complex subunit 5 K11376 ELP5; elongator complex protein 5
D 72341 Elp6; elongator acetyltransferase complex subunit 6 K11377 ELP6; elongator complex protein 6
C Elongator related proteins
D 115487433 Gm47679; predicted gene, 47679 K15455 DPH3; diphthamide biosynthesis protein 3
D 105638 Dph3; diphthamine biosynthesis 3 K15455 DPH3; diphthamide biosynthesis protein 3
D 100087 Kti12; KTI12 homolog, chromatin associated K15456 KTI12; protein KTI12
C Other tRNA modification factors
D 230734 Yrdc; yrdC domain containing (E.coli) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 66966 Trit1; tRNA isopentenyltransferase 1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 70359 Gtpbp3; GTP binding protein 3 K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 68291 Mto1; mitochondrial tRNA translation optimization 1 K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 60507 Qtrt1; queuine tRNA-ribosyltransferase catalytic subunit 1 K00777 QTRT1; queuine tRNA-ribosyltransferase catalytic subunit [EC:2.4.2.64]
D 106248 Qtrt2; queuine tRNA-ribosyltransferase accessory subunit 2 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 20768 Sephs2; selenophosphate synthetase 2 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109079 Sephs1; selenophosphate synthetase 1 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 233802 Thumpd1; THUMP domain containing 1 K06963 TAN1; tRNA acetyltransferase TAN1
D 66628 Thg1l; tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D 11907 Ate1; arginyltransferase 1 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 67789 Dalrd3; DALR anticodon binding domain containing 3 K24973 DALRD3; DALR anticodon-binding domain-containing protein 3
B tRNA degradation factors
C TRAMP complex
D 210106 Tent4a; terminal nucleotidyltransferase 4A K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 214627 Tent4b; terminal nucleotidyltransferase 4B K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 319885 Zcchc7; zinc finger, CCHC domain containing 7 K12597 AIR1_2; protein AIR1/2
D 72198 Mtrex; Mtr4 exosome RNA helicase K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C Rapid tRNA decay (RTD) pathway factors
D 24127 Xrn1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 24128 Xrn2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 23827 Bpnt1; 3'(2'), 5'-bisphosphate nucleotidase 1 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
D 11727 Ang; angiogenin, ribonuclease, RNase A family, 5 K16631 ANG; angiogenin [EC:3.1.27.-]
D 11731 Ang2; angiogenin, ribonuclease A family, member 2 K16631 ANG; angiogenin [EC:3.1.27.-]
D 219033 Ang4; angiogenin, ribonuclease A family, member 4 K16631 ANG; angiogenin [EC:3.1.27.-]
D 503844 Ang5; angiogenin, ribonuclease A family, member 5 K16631 ANG; angiogenin [EC:3.1.27.-]
D 11730 Ang3; angiogenin, ribonuclease A family, member 3 K16631 ANG; angiogenin [EC:3.1.27.-]
D 630952 Ang6; angiogenin, ribonuclease A family, member 6 K16631 ANG; angiogenin [EC:3.1.27.-]
D 276950 Slfn8; schlafen 8 K24459 SLFN13; schlafen family member 13 [EC:3.1.-.-]
D 237887 Slfn10-ps; schlafen 10, pseudogene K24459 SLFN13; schlafen family member 13 [EC:3.1.-.-]
D 237886 Slfn9; schlafen 9 K24459 SLFN13; schlafen family member 13 [EC:3.1.-.-]
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D 68626 Elac2; elaC ribonuclease Z 2 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 114615 Elac1; elaC ribonuclease Z 1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 100037283 Rnaset2a; ribonuclease T2A K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 68195 Rnaset2b; ribonuclease T2B K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D 70047 Trnt1; tRNA nucleotidyl transferase, CCA-adding, 1 K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
D 28088 Rtcb; RNA 2',3'-cyclic phosphate and 5'-OH ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 102436 Lars2; leucyl-tRNA synthetase, mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 107045 Lars1; leucyl-tRNA synthetase 1 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 230577 Pars2; prolyl-tRNA synthetase (mitochondrial)(putative) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D 107271 Yars1; tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 70120 Yars2; tyrosyl-tRNA synthetase 2 (mitochondrial) K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 22375 Wars1; tryptophanyl-tRNA synthetase1 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 70560 Wars2; tryptophanyl tRNA synthetase 2 (mitochondrial) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 110960 Tars1; threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 272396 Tars3; threonyl-tRNA synthetase 3 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 71807 Tars2; threonyl-tRNA synthetase 2, mitochondrial (putative) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 105148 Iars1; isoleucyl-tRNA synthetase 1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 381314 Iars2; isoleucine-tRNA synthetase 2, mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 85305 Kars1; lysyl-tRNA synthetase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 234734 Aars1; alanyl-tRNA synthetase 1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 224805 Aars2; alanyl-tRNA synthetase 2, mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 22321 Vars1; valyl-tRNA synthetase 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 68915 Vars2; valyl-tRNA synthetase 2, mitochondrial K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 216443 Mars1; methionine-tRNA synthetase 1 K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 212679 Mars2; methionine-tRNA synthetase 2 (mitochondrial) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 71984 Sars2; seryl-aminoacyl-tRNA synthetase 2 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 20226 Sars1; seryl-tRNA synthetase 1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 226539 Dars2; aspartyl-tRNA synthetase 2 (mitochondrial) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 27267 Cars1; cysteinyl-tRNA synthetase 1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 71941 Cars2; cysteinyl-tRNA synthetase 2, mitochondrial K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 67417 Ears2; glutamyl-tRNA synthetase 2, mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 97541 Qars1; glutaminyl-tRNA synthetase 1 K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 104458 Rars1; arginyl-tRNA synthetase 1 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 109093 Rars2; arginyl-tRNA synthetase 2, mitochondrial K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 69955 Fars2; phenylalanine-tRNA synthetase 2, mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 66590 Farsa; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 23874 Farsb; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 15115 Hars1; histidyl-tRNA synthetase 1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 70791 Hars2; histidyl-tRNA synthetase 2 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 70223 Nars1; asparaginyl-tRNA synthetase 1 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 244141 Nars2; asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D 66044 Dtd1; D-tyrosyl-tRNA deacylase 1 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 328092 Dtd2; D-tyrosyl-tRNA deacylase 2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 69684 Aarsd1; alanyl-tRNA synthetase domain containing 1 K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferases
C Methyltransferases
D 17299 Mettl1; methyltransferase 1, tRNA methylguanosine K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 70359 Gtpbp3; GTP binding protein 3 K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 74753 Trmo; tRNA methyltransferase O K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D 56361 Pus1; pseudouridine synthase 1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 72133 Trub1; TruB pseudouridine (psi) synthase family member 1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 78895 Pus7l; pseudouridylate synthase 7-like K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 78697 Pus7; pseudouridylate synthase 7 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D 18041 Nfs1; nitrogen fixation gene 1 (S. cerevisiae) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D 76367 Trp53rkb; transformation related protein 53 regulating kinase B K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 381406 Trp53rka; transformation related protein 53 regulating kinase A K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 72085 Osgepl1; O-sialoglycoprotein endopeptidase-like 1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 66246 Osgep; O-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D 68291 Mto1; mitochondrial tRNA translation optimization 1 K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 66966 Trit1; tRNA isopentenyltransferase 1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 19286 Pts; 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D 20768 Sephs2; selenophosphate synthetase 2 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109079 Sephs1; selenophosphate synthetase 1 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 230734 Yrdc; yrdC domain containing (E.coli) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
B tRNA degradation factors
C 71701 Pnpt1; polyribonucleotide nucleotidyltransferase 1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 57444 Isg20; interferon-stimulated protein K12579 ISG20; interferon-stimulated gene 20 kDa protein [EC:3.1.13.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024