+D GENES KO #

  KEGG Orthology (KO) - Methanobrevibacter smithii

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:msi00010] D Msm_0615 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Msm_0056 fructose-1,6-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Msm_0919 triosephosphate isomerase, TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Msm_0962 glyceraldehyde 3-phosphate dehydrogenase, GapA K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Msm_0918 3-phosphoglycerate kinase, Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Msm_0153 predicted phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Msm_0657 phosphoglycerate mutase, AP superfamily K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Msm_1435 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Msm_0988 phosphoenolpyruvate synthase, PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_0559 pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Msm_0560 pyruvate:ferredoxin oxidoreductase, beta subunit, PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Msm_0557 pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Msm_0558 pyruvate:ferredoxin oxidoreductase, delta subunit, PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Msm_0927 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit, KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Msm_0926 2-oxoglutarate ferredoxin oxidoreductase, beta subunit, KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Msm_0330 acetyl-CoA synthetase, AMP-forming-related, Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Msm_1471 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Msm_0648 phosphomannomutase, ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:msi00020] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_0927 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit, KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Msm_0926 2-oxoglutarate ferredoxin oxidoreductase, beta subunit, KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Msm_0925 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit, KorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Msm_0928 2-oxoglutarate ferredoxin oxidoreductase, delta subunit, KorD K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Msm_0228 succinyl-CoA synthetase, alpha subunit, SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Msm_0924 succinyl-CoA synthetase, beta subunit, SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Msm_0447 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Msm_0563 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Msm_0929 fumarate hydratase, FumA K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Msm_0769 fumarate hydratase, class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Msm_0765 pyruvate carboxylase (acetyl-CoA/biotin carboxylase), subunit A, PycA K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Msm_0939 pyruvate carboxylase, subunit B, PycB K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Msm_0559 pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Msm_0560 pyruvate:ferredoxin oxidoreductase, beta subunit, PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Msm_0557 pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Msm_0558 pyruvate:ferredoxin oxidoreductase, delta subunit, PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:msi00030] D Msm_0284 ribose 5-phosphate isomerase, RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Msm_1213 3-hexulose 6-phosphate synthase/formaldehyde activating enzyme K13812 fae-hps; bifunctional enzyme Fae/Hps [EC:4.2.1.147 4.1.2.43] D Msm_0426 demethylmenaquinone methyltransferase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D Msm_1391 predicted sugar phosphate isomerase involved in capsule formation, GutQ K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Msm_0843 2-deoxyribose-5-phosphate aldolase (DERA), DeoC K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Msm_0648 phosphomannomutase, ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Msm_1577 ribose-phosphate pyrophosphokinase, PrsA K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Msm_0615 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Msm_0056 fructose-1,6-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] C 00040 Pentose and glucuronate interconversions [PATH:msi00040] D Msm_1612 predicted UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Msm_1604 UDP-glucose pyrophosphorylase, GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Msm_0376 alcohol dehydrogenase (zinc-binding), GroES-like protein K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405] D Msm_0377 4-diphosphocytidyl-2-methyl-D-erithritol synthase, IspD K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40] D Msm_1542 4-diphosphocytidyl-2-methyl-D-erithritol synthase, IspD K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40] D Msm_1270 fuculose-1-phosphate aldolase, class II aldolase/adducin family K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:msi00051] D Msm_0648 phosphomannomutase, ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Msm_1270 fuculose-1-phosphate aldolase, class II aldolase/adducin family K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Msm_0615 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Msm_0056 fructose-1,6-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Msm_0919 triosephosphate isomerase, TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:msi00052] D Msm_1702 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Msm_0327 UDP-glucose 4-epimerase (NAD dependent) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Msm_1604 UDP-glucose pyrophosphorylase, GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Msm_0648 phosphomannomutase, ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Msm_1502 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] C 00053 Ascorbate and aldarate metabolism D Msm_1612 predicted UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:msi00500] D Msm_1604 UDP-glucose pyrophosphorylase, GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Msm_0648 phosphomannomutase, ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:msi00520] D Msm_1551 glucosamine--fructose-6-phosphate aminotransferase, GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Msm_0656 phosphomannomutase, ManB K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Msm_0655 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Msm_0853 UDP-N-acetylglucosamine 2-epimerase, WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Msm_1303 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Msm_1535 predicted dTDP-D-glucose 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Msm_1538 CMP-sialic acid synthetase, NeuA K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Msm_1539 sialic acid synthase, NeuB K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D Msm_0648 phosphomannomutase, ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Msm_1604 UDP-glucose pyrophosphorylase, GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Msm_1612 predicted UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Msm_1702 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Msm_0327 UDP-glucose 4-epimerase (NAD dependent) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Msm_1502 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Msm_1030 predicted pyridoxal phosphate-dependent enzyme K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:msi00620] D Msm_0330 acetyl-CoA synthetase, AMP-forming-related, Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Msm_0559 pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Msm_0560 pyruvate:ferredoxin oxidoreductase, beta subunit, PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Msm_0557 pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Msm_0558 pyruvate:ferredoxin oxidoreductase, delta subunit, PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Msm_0927 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit, KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Msm_0926 2-oxoglutarate ferredoxin oxidoreductase, beta subunit, KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_1471 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Msm_0467 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K19266 E1.2.1.22; lactaldehyde dehydrogenase [EC:1.2.1.22] D Msm_1366 lactoylglutathione lyase, LglU K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Msm_1097 Zn-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Msm_0765 pyruvate carboxylase (acetyl-CoA/biotin carboxylase), subunit A, PycA K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Msm_0939 pyruvate carboxylase, subunit B, PycB K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Msm_0447 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Msm_0563 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Msm_0929 fumarate hydratase, FumA K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Msm_0769 fumarate hydratase, class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Msm_0988 phosphoenolpyruvate synthase, PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_1246 isopropylmalate synthase, LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Msm_0722 2-isopropylmalate synthase, LeuA K10977 aksA; methanogen homocitrate synthase [EC:2.3.3.14 2.3.3.-] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:msi00630] D Msm_0330 acetyl-CoA synthetase, AMP-forming-related, Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_0946 sucrose-phosphate phosphatase (SPP-like), HAD family K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D Msm_1418 glutamine synthetase, GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Msm_1337 glycine hydroxymethyltransferase, GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:msi00640] D Msm_0330 acetyl-CoA synthetase, AMP-forming-related, Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Msm_1471 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_0559 pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Msm_0560 pyruvate:ferredoxin oxidoreductase, beta subunit, PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Msm_0557 pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Msm_0558 pyruvate:ferredoxin oxidoreductase, delta subunit, PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Msm_0924 succinyl-CoA synthetase, beta subunit, SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Msm_0228 succinyl-CoA synthetase, alpha subunit, SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:msi00650] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_0965 3-hydroxyacyl-CoA dehydrogenase, FadB K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Msm_0559 pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Msm_0560 pyruvate:ferredoxin oxidoreductase, beta subunit, PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Msm_0557 pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Msm_0558 pyruvate:ferredoxin oxidoreductase, delta subunit, PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Msm_0927 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit, KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Msm_0926 2-oxoglutarate ferredoxin oxidoreductase, beta subunit, KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Msm_1561 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D Msm_0686 acetolactate synthase (TPP-requiring), large subunit, IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Msm_1225 acetolactate synthase, large subunit (TPP-requiring), IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Msm_1224 acetolactate synthase, small subunit (regulatory), IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:msi00660] D Msm_0686 acetolactate synthase (TPP-requiring), large subunit, IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Msm_1225 acetolactate synthase, large subunit (TPP-requiring), IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Msm_1224 acetolactate synthase, small subunit (regulatory), IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Msm_0924 succinyl-CoA synthetase, beta subunit, SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Msm_0228 succinyl-CoA synthetase, alpha subunit, SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Msm_0350 2-isopropylmalate synthase, LeuA K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Msm_1300 3-isopropylmalate dehydratase, large subunit, LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Msm_1299 3-isopropylmalate dehydratase, small subunit, LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Msm_1298 3-isopropylmalate dehydrogenase, LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:msi00562] D Msm_0940 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Msm_0919 triosephosphate isomerase, TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:msi00190] D Msm_0435 vacuolar-type H+-transporting ATP synthase, subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Msm_0434 vacuolar-type H+-transporting ATP synthase, subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Msm_0437 vacuolar-type H+-transporting ATP synthase, subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Msm_0433 vacuolar-type H+-transporting ATP synthase, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Msm_0438 vacuolar-type H+-transporting ATP synthase, subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Msm_0436 vacuolar-type H+-transporting ATP synthase, subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Msm_0441 vacuolar-type H+-transporting ATP synthase, subunit H K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Msm_0440 vacuolar-type H+-transporting ATP synthase, subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Msm_0439 vacuolar-type H+-transporting ATP synthase, subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Msm_0198 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Msm_1424 polyphosphate kinase, ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:msi00720] D Msm_0559 pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Msm_0560 pyruvate:ferredoxin oxidoreductase, beta subunit, PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Msm_0557 pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Msm_0558 pyruvate:ferredoxin oxidoreductase, delta subunit, PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Msm_0988 phosphoenolpyruvate synthase, PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Msm_0765 pyruvate carboxylase (acetyl-CoA/biotin carboxylase), subunit A, PycA K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Msm_0939 pyruvate carboxylase, subunit B, PycB K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Msm_0447 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Msm_0563 fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Msm_0929 fumarate hydratase, FumA K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Msm_0769 fumarate hydratase, class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Msm_1258 fumarate reductase/succinate dehydrogenase flavoprotein, TfrA K18209 tfrA; fumarate reductase (CoM/CoB) subunit A [EC:1.3.4.1] D Msm_0393 fumarate reductase, iron-sulfur protein K18210 tfrB; fumarate reductase (CoM/CoB) subunit B [EC:1.3.4.1] D Msm_0228 succinyl-CoA synthetase, alpha subunit, SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Msm_0924 succinyl-CoA synthetase, beta subunit, SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_0927 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit, KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Msm_0926 2-oxoglutarate ferredoxin oxidoreductase, beta subunit, KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Msm_0925 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit, KorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Msm_0928 2-oxoglutarate ferredoxin oxidoreductase, delta subunit, KorD K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Msm_0561 formate dehydrogenase, iron-sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Msm_0330 acetyl-CoA synthetase, AMP-forming-related, Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:msi00680] D Msm_1404 formate dehydrogenase, alpha subunit, FdhA K22516 fdhA; formate dehydrogenase (coenzyme F420) alpha subunit [EC:1.17.98.3 1.8.98.6] D Msm_1463 formate dehydrogenase, alpha subunit, FdhA K22516 fdhA; formate dehydrogenase (coenzyme F420) alpha subunit [EC:1.17.98.3 1.8.98.6] D Msm_1462 formate dehydrogenase, beta subunit, FdhB K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6] D Msm_1405 formate dehydrogenase, beta subunit, FdhB K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6] D Msm_0561 formate dehydrogenase, iron-sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Msm_1337 glycine hydroxymethyltransferase, GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Msm_1435 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Msm_0615 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Msm_0056 fructose-1,6-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Msm_1391 predicted sugar phosphate isomerase involved in capsule formation, GutQ K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Msm_0426 demethylmenaquinone methyltransferase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D Msm_1213 3-hexulose 6-phosphate synthase/formaldehyde activating enzyme K13812 fae-hps; bifunctional enzyme Fae/Hps [EC:4.2.1.147 4.1.2.43] D Msm_0370 glutamate synthase, subunit 1 K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D Msm_0369 glutamate synthase, subunit 3 K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D Msm_0027 glutamate synthase, domain 2 with rubredoxin K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D Msm_0368 glutamate synthase (NADPH), subunit 2 K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D Msm_1413 tungsten formylmethanofuran dehydrogenase, subunit A, FwdA K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12] D Msm_1412 tungsten formylmethanofuran dehydrogenase, subunit B, FwdB K00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12] D Msm_1414 tungsten formylmethanofuran dehydrogenase, subunit C, FwdC K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12] D Msm_1411 tungsten formylmethanofuran dehydrogenase, subunit D, FwdD K00203 fwdD; formylmethanofuran dehydrogenase subunit D [EC:1.2.7.12] D Msm_1408 tungsten formylmethanofuran dehydrogenase, subunit E, FwdE K00204 fwdH; 4Fe-4S ferredoxin D Msm_1409 tungsten formylmethanofuran dehydrogenase, subunit F, FwdF K00205 fwdF; 4Fe-4S ferredoxin D Msm_0783 tungsten formylmethanofuran dehydrogenase, subunit F, FwdF K00205 fwdF; 4Fe-4S ferredoxin D Msm_1410 tungsten formylmethanofuran dehydrogenase, subunit G, FwdG K11260 fwdG; 4Fe-4S ferredoxin D Msm_1092 formylmethanofuran:tetrahydromethanopterin formyltransferase, Ftr K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101] D Msm_0308 formylmethanofuran:tetrahydromethanopterin formyltransferase, FtrC K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101] D Msm_1723 N5,N10-methenyl-tetrahydromethanopterin cyclohydrolase, Mch K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27] D Msm_1204 coenzyme F420-dependent methylenetetrahydromethanopterin dehydrogenase, Mtd K00319 mtd; methylenetetrahydromethanopterin dehydrogenase [EC:1.5.98.1] D Msm_1124 coenzyme F420-reducing hydrogenase, alpha subunit, FrhA K00440 frhA; coenzyme F420 hydrogenase subunit alpha [EC:1.12.98.1] D Msm_0135 coenzyme F420-reducing hydrogenase, beta subunit K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D Msm_1121 coenzyme F420-reducing hydrogenase, beta subunit, FrhB K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D Msm_1123 coenzyme F420-reducing hydrogenase, delta subunit, FrhD K00442 frhD; coenzyme F420 hydrogenase subunit delta D Msm_1122 coenzyme F420-reducing hydrogenase, gamma subunit, FrhG K00443 frhG; coenzyme F420 hydrogenase subunit gamma [EC:1.12.98.1] D Msm_0572 H(2)-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase (coenzyme F420-dependent), Mth K13942 hmd; 5,10-methenyltetrahydromethanopterin hydrogenase [EC:1.12.98.2] D Msm_0542 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase, Mer K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2] D Msm_1010 N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit A, MtrA K00577 mtrA; tetrahydromethanopterin S-methyltransferase subunit A [EC:7.2.1.4] D Msm_1011 N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit B, MtrB K00578 mtrB; tetrahydromethanopterin S-methyltransferase subunit B [EC:7.2.1.4] D Msm_1012 N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit C, MtrC K00579 mtrC; tetrahydromethanopterin S-methyltransferase subunit C [EC:7.2.1.4] D Msm_1013 N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit D, MtrD K00580 mtrD; tetrahydromethanopterin S-methyltransferase subunit D [EC:7.2.1.4] D Msm_1014 N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit E, MtrE K00581 mtrE; tetrahydromethanopterin S-methyltransferase subunit E [EC:7.2.1.4] D Msm_1009 N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit F, MtrF K00582 mtrF; tetrahydromethanopterin S-methyltransferase subunit F [EC:7.2.1.4] D Msm_1008 N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit G, MtrG K00583 mtrG; tetrahydromethanopterin S-methyltransferase subunit G [EC:7.2.1.4] D Msm_1007 N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit H, MtrH K00584 mtrH; tetrahydromethanopterin S-methyltransferase subunit H [EC:7.2.1.4] D Msm_0627 tetrahydromethanopterin S-methyltransferase, subunit H, MtrH K00584 mtrH; tetrahydromethanopterin S-methyltransferase subunit H [EC:7.2.1.4] D Msm_0902 methyl-coenzyme M reductase, alpha subunit, McrA K00399 mcrA; methyl-coenzyme M reductase alpha subunit [EC:2.8.4.1] D Msm_1015 methyl-coenzyme M reductase, alpha subunit, McrA K00399 mcrA; methyl-coenzyme M reductase alpha subunit [EC:2.8.4.1] D Msm_1698 methyl coenzyme M reductase system, component A2-like protein K00400 K00400; methyl coenzyme M reductase system, component A2 D Msm_0971 methyl-coenzyme M reductase, component A2 K00400 K00400; methyl coenzyme M reductase system, component A2 D Msm_1019 methyl-coenzyme M reductase, beta subunit, McrB K00401 mcrB; methyl-coenzyme M reductase beta subunit [EC:2.8.4.1] D Msm_0905 methyl-coenzyme M reductase, beta subunit, McrB K00401 mcrB; methyl-coenzyme M reductase beta subunit [EC:2.8.4.1] D Msm_1016 methyl-coenzyme M reductase, gamma subunit, McrG K00402 mcrG; methyl-coenzyme M reductase gamma subunit [EC:2.8.4.1] D Msm_0903 methyl-coenzyme M reductase, gamma subunit, McrG K00402 mcrG; methyl-coenzyme M reductase gamma subunit [EC:2.8.4.1] D Msm_1017 methyl-coenzyme M reductase, C subunit, McrC K03421 mcrC; methyl-coenzyme M reductase subunit C D Msm_0904 methyl-coenzyme M reductase, D subunit, McrD K03422 mcrD; methyl-coenzyme M reductase subunit D D Msm_1018 methyl-coenzyme M reductase, D subunit, McrD K03422 mcrD; methyl-coenzyme M reductase subunit D D Msm_0082 heterodisulfide reductase, subunit A, HdrA K22480 hdrA1; heterodisulfide reductase subunit A1 [EC:1.8.7.3] D Msm_0083 heterodisulfide reductase, subunit B, HdrB K22481 hdrB1; heterodisulfide reductase subunit B1 [EC:1.8.7.3] D Msm_0084 heterodisulfide reductase, subunit C, HdrC K22482 hdrC1; heterodisulfide reductase subunit C1 [EC:1.8.7.3] D Msm_1336 heterodisulfide reductase, subunit A, HdrA K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Msm_0795 heterodisulfide reductase, subunit B, HdrB K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Msm_0796 heterodisulfide reductase, subunit C, HdrC K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Msm_1461 methyl viologen-reducing hydrogenase, delta subunit, MvhD K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Msm_1001 methyl viologen-reducing hydrogenase, delta subunit, MvhD K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Msm_0999 methyl viologen-reducing hydrogenase, alpha subunit, MvhA K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5] D Msm_1000 methyl viologen-reducing hydrogenase, gamma subunit, MvhG K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D Msm_0330 acetyl-CoA synthetase, AMP-forming-related, Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Msm_0559 pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Msm_0560 pyruvate:ferredoxin oxidoreductase, beta subunit, PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Msm_0557 pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Msm_0558 pyruvate:ferredoxin oxidoreductase, delta subunit, PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Msm_0988 phosphoenolpyruvate synthase, PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Msm_0153 predicted phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Msm_0657 phosphoglycerate mutase, AP superfamily K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Msm_0457 D-3-phosphoglycerate dehydrogenase, SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Msm_0719 phosphoserine phosphatase, HAD family, SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Msm_0518 methylcobalamin:coenzyme M methyltransferase, MtaA K14080 mtaA; [methyl-Co(III) methanol/glycine betaine-specific corrinoid protein]:coenzyme M methyltransferase [EC:2.1.1.246 2.1.1.377] D Msm_0515 methanol:cobalamin methyltransferase. MtaB K04480 mtaB; methanol---5-hydroxybenzimidazolylcobamide Co-methyltransferase [EC:2.1.1.90] D Msm_0516 corrinoid protein (methionine synthase-related), MtaC K14081 mtaC; methanol corrinoid protein D Msm_0086 (2R)-phospho-3-sulfolactate synthase, ComA K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19] D Msm_1023 2-phosphosulpholactate phosphatase, ComB, (coenzyme M biosynthesis) K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D Msm_1040 malate/L-lactate dehydrogenase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337] D Msm_0080 sulfopyruvate decarboxylase, comD K06034 comD; sulfopyruvate decarboxylase subunit alpha [EC:4.1.1.79] D Msm_0081 sulfopyruvate decarboxylase, ComE K13039 comE; sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79] D Msm_0079 CofH protein (7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO)/F420 biosynthesis) K11781 cofH; 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase [EC:2.5.1.147] D Msm_1035 FO synthase subunit 1 (SAM-dependent), CofG (F420 biosynthesis) K11780 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase [EC:4.3.1.32] D Msm_0288 conserved hypothetical protein Msm_0288 K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105] D Msm_0974 LPPG:FO 2-phospho-L-lactate transferase, CofD K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] D Msm_0975 F420-0:gamma-glutamyl ligase, CofE K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] D Msm_0722 2-isopropylmalate synthase, LeuA K10977 aksA; methanogen homocitrate synthase [EC:2.3.3.14 2.3.3.-] D Msm_0723 3-isopropylmalate dehydratase, LeuC K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114] D Msm_0847 3-isopropylmalate dehydratase, small subunit, LeuD K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114] D Msm_0373 isocitrate/isopropylmalate dehydrogenase, LeuB K10978 aksF; methanogen homoisocitrate dehydrogenase [EC:1.1.1.87 1.1.1.-] D Msm_0987 tyrosine decarboxylase, MfnA K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D Msm_0852 predicted ATP-utilizing enzyme K06914 mfnD; tyramine---L-glutamate ligase [EC:6.3.4.24] D Msm_1628 conserved hypothetical protein Msm_1628 K09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153] D Msm_0604 predicted aspartate/glutamate/uridylate kinase K07144 mfnE; 5-(aminomethyl)-3-furanmethanol phosphate kinase [EC:2.7.4.31] D Msm_0851 predicted transcriptional regulator K07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131] C 00910 Nitrogen metabolism [PATH:msi00910] D Msm_1446 predicted hydroxylamine reductase, Hcp K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Msm_0888 glutamate dehydrogenase (NADP+), GdhA K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Msm_1418 glutamine synthetase, GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Msm_1223 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:msi00920] D Msm_1469 nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component, TauA K15553 ssuA; sulfonate transport system substrate-binding protein D Msm_0291 nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC K15554 ssuC; sulfonate transport system permease protein D Msm_0290 nitrate/sulfonate/bicarbonate ABC transporter, ATPase component, TauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Msm_0270 serine acetyltransferase, CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Msm_0271 cysteine synthase, CysK K01738 cysK; cysteine synthase [EC:2.5.1.47] D Msm_0496 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Msm_0175 homoserine O-acetyltransferase, MetX K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:msi00061] D Msm_0374 long-chain fatty-acid-CoA ligase (AMP-forming), CaiC K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation [PATH:msi00062] D Msm_0965 3-hydroxyacyl-CoA dehydrogenase, FadB K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00071 Fatty acid degradation [PATH:msi00071] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_0965 3-hydroxyacyl-CoA dehydrogenase, FadB K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Msm_0374 long-chain fatty-acid-CoA ligase (AMP-forming), CaiC K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism C 00564 Glycerophospholipid metabolism [PATH:msi00564] D Msm_1540 glycerol-3-phosphate dehydrogenase (NAD) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Msm_1514 glycerol-3-phosphate cytidyltransferase, TagD K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15] D Msm_0028 SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D Msm_1706 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Msm_0286 glycerol 1-phosphate dehydrogenase (Dehydroquinate synthase-like family) K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D Msm_0124 predicted phosphate-binding protein (PcrB family) K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D Msm_0941 prenyltransferase, UbiA K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D Msm_0850 predicted CDP-diglyceride synthetase K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] D Msm_0982 phosphatidylserine synthase, PssA K19665 pssA; archaetidylserine synthase [EC:2.7.8.38] D Msm_1701 predicted FAD-dependent dehydrogenase, geranylgeranyl reductase family K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:msi00230] D Msm_0648 phosphomannomutase, ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Msm_1577 ribose-phosphate pyrophosphokinase, PrsA K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Msm_1704 glutamine phosphoribosylpyrophosphate amidotransferase, PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Msm_1227 phosphoribosylamine-glycine ligase, PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Msm_1342 phosphoribosylformylglycinamidine (FGAM) synthase, PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Msm_1548 phosphoribosylformylglycinamidine (FGAM) synthase, PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Msm_1549 phosphoribosylformylglycinamidine (FGAM) synthase, PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Msm_1039 phosphoribosylformylglycinamidine cyclo-ligase (AIRS), PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Msm_1287 phosphoribosylaminoimidazole carboxylase (NCAIR mutase), PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Msm_1547 phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthase, PurC K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Msm_1151 adenylosuccinate lyase, PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Msm_0506 ATP-utilizing enzyme, ATP-grasp superfamily K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D Msm_0976 IMP cyclohydrolase, PurO K11176 purO; IMP cyclohydrolase [EC:3.5.4.10] D Msm_1359 adenine phosphoribosyltransferase, Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Msm_1218 predicted acid phosphatase (survival protein), SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Msm_1389 sugar kinase, ribokinase/pfkB superfamily K22026 K22026; nucleoside kinase [EC:2.7.1.73 2.7.1.213 2.7.1.-] D Msm_1629 IMP dehydrogenase/GMP reductase, GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Msm_0203 nucleoside diphosphate kinase, Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Msm_1195 xanthosine triphosphate pyrophosphatase, Ham1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Msm_0343 GMP synthase (glutamine-hydrolysing), subunit A, GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Msm_0345 GMP synthase (glutamine-hydrolysing), PP-ATPase domain/subunit, GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Msm_1383 anaerobic ribonucleoside-triphosphate reductase, NrdD K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Msm_1423 exopolyphosphatase, GppA K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Msm_0721 adenylate cyclase, class 2 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D Msm_1468 adenylosuccinate synthetase, PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Msm_0874 adenine deaminase, AdeC K01486 ade; adenine deaminase [EC:3.5.4.2] D Msm_0737 adenylate kinase, AdkA K00939 adk; adenylate kinase [EC:2.7.4.3] D Msm_0713 predicted nucleotide kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:msi00240] D Msm_0488 carbamoylphosphate synthase, large subunit, CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Msm_0489 carbamoylphosphate synthase, small subunit, CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Msm_1263 aspartate carbamoyltransferase, PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Msm_0862 aspartate carbamoyltransferase regulatory chain, PyrI K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Msm_0997 dihydroorotase, PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3] D Msm_1044 dihydroorotate dehydrogenase, PyrD K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Msm_1043 dihydroorotate dehydrogenase electron transfer subunit, PyrK K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Msm_0821 orotate phosphoribosyltransferase, PyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Msm_1617 orotidine-5'-phosphate decarboxylase, PyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Msm_0415 uridylate kinase, PyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Msm_0203 nucleoside diphosphate kinase, Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Msm_0147 CTP synthase (UTP-ammonia lyase), PyrG K01937 pyrG; CTP synthase [EC:6.3.4.2] D Msm_0734 cytidylate kinase, Cmk K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Msm_1218 predicted acid phosphatase (survival protein), SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Msm_0398 uracil phosphoribosyltransferase, Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Msm_1389 sugar kinase, ribokinase/pfkB superfamily K22026 K22026; nucleoside kinase [EC:2.7.1.73 2.7.1.213 2.7.1.-] D Msm_1386 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Msm_1383 anaerobic ribonucleoside-triphosphate reductase, NrdD K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Msm_0402 dCTP deaminase, dUTPase family K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Msm_0077 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Msm_0520 thymidylate kinase, Tmk K00943 tmk; dTMP kinase [EC:2.7.4.9] D Msm_0687 deoxycytidine-triphosphate deaminase, Dcd K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Msm_1734 predicted thymidylate synthase, ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:msi00250] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0160 asparagine synthetase, AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Msm_0500 N-carbamoyl-D-amino acid amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Msm_1084 argininosuccinate synthase, ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Msm_0192 argininosuccinate lyase, ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Msm_1468 adenylosuccinate synthetase, PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Msm_1151 adenylosuccinate lyase, PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Msm_1263 aspartate carbamoyltransferase, PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Msm_0862 aspartate carbamoyltransferase regulatory chain, PyrI K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Msm_0888 glutamate dehydrogenase (NADP+), GdhA K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Msm_1418 glutamine synthetase, GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Msm_0488 carbamoylphosphate synthase, large subunit, CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Msm_0489 carbamoylphosphate synthase, small subunit, CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Msm_1549 phosphoribosylformylglycinamidine (FGAM) synthase, PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Msm_1551 glucosamine--fructose-6-phosphate aminotransferase, GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Msm_1704 glutamine phosphoribosylpyrophosphate amidotransferase, PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:msi00260] D Msm_0832 aspartokinase, alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4] D Msm_0829 aspartate-semialdehyde dehydrogenase, Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Msm_0154 homoserine dehydrogenase, ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Msm_0214 threonine synthase (pyridoxal-phosphate dependent), ThrC K01733 thrC; threonine synthase [EC:4.2.3.1] D Msm_1337 glycine hydroxymethyltransferase, GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Msm_0153 predicted phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Msm_0657 phosphoglycerate mutase, AP superfamily K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Msm_0457 D-3-phosphoglycerate dehydrogenase, SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Msm_0719 phosphoserine phosphatase, HAD family, SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_1141 tryptophan synthase, alpha subunit, TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Msm_1142 tryptophan synthase, beta subunit, TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Msm_1242 tryptophan synthase, beta subunit, TrpB K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:msi00270] D Msm_0270 serine acetyltransferase, CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Msm_0271 cysteine synthase, CysK K01738 cysK; cysteine synthase [EC:2.5.1.47] D Msm_0044 PLP dependent aminotransferase (aspartate) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Msm_0102 cobalamin-independent methionine synthase, MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Msm_1340 S-adenosylmethionine synthetase, MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Msm_1259 predicted metal-dependent hydrolase, TRZ/ATZ family (xenobiotic metabolism) K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Msm_0665 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D Msm_0804 translation initiation factor aIF-2B, alpha subunit K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Msm_0531 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Msm_0727 S-adenosylhomocysteine hydrolase (adenosylhomocysteinase), AhcY K01566 E3.13.1.9; S-inosyl-L-homocysteine hydrolase [EC:3.13.1.9] D Msm_0832 aspartokinase, alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4] D Msm_0829 aspartate-semialdehyde dehydrogenase, Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Msm_0154 homoserine dehydrogenase, ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Msm_0085 putative ferredoxin K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D Msm_0496 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Msm_0175 homoserine O-acetyltransferase, MetX K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Msm_0174 O-acetylhomoserine sulfhydrylase (PLP-dependent), MET17 K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Msm_0265 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Msm_1202 branched-chain-amino-acid aminotransferase, IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0457 D-3-phosphoglycerate dehydrogenase, SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:msi00280] D Msm_1202 branched-chain-amino-acid aminotransferase, IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_0332 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit K00186 vorA; 2-oxoisovalerate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.7] D Msm_0333 2-oxoisovalerate ferredoxin oxidoreductase, beta subunit K00187 vorB; 2-oxoisovalerate ferredoxin oxidoreductase beta subunit [EC:1.2.7.7] D Msm_0331 2-oxoisovalerate ferredoxin oxidoreductase, delta subunit K00188 vorD; 2-oxoisovalerate ferredoxin oxidoreductase delta subunit [EC:1.2.7.7] D Msm_0965 3-hydroxyacyl-CoA dehydrogenase, FadB K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_1561 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:msi00290] D Msm_0350 2-isopropylmalate synthase, LeuA K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Msm_1300 3-isopropylmalate dehydratase, large subunit, LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Msm_1299 3-isopropylmalate dehydratase, small subunit, LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Msm_1298 3-isopropylmalate dehydrogenase, LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Msm_0686 acetolactate synthase (TPP-requiring), large subunit, IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Msm_1225 acetolactate synthase, large subunit (TPP-requiring), IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Msm_1224 acetolactate synthase, small subunit (regulatory), IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Msm_1222 ketol-acid reductoisomerase, IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Msm_1237 dihydroxy-acid dehydratase, IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Msm_1202 branched-chain-amino-acid aminotransferase, IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Msm_1246 isopropylmalate synthase, LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:msi00300] D Msm_0154 homoserine dehydrogenase, ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Msm_0832 aspartokinase, alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4] D Msm_0829 aspartate-semialdehyde dehydrogenase, Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Msm_0831 dihydrodipicolinate synthase, DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Msm_0830 dihydrodipicolinate reductase, DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Msm_1368 N-acetylornithine aminotransferase, ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Msm_1372 diaminopimelate epimerase, DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Msm_1455 aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Msm_1371 diaminopimelate decarboxylase, LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Msm_0722 2-isopropylmalate synthase, LeuA K10977 aksA; methanogen homocitrate synthase [EC:2.3.3.14 2.3.3.-] D Msm_0723 3-isopropylmalate dehydratase, LeuC K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114] D Msm_0847 3-isopropylmalate dehydratase, small subunit, LeuD K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114] D Msm_0373 isocitrate/isopropylmalate dehydrogenase, LeuB K10978 aksF; methanogen homoisocitrate dehydrogenase [EC:1.1.1.87 1.1.1.-] C 00310 Lysine degradation [PATH:msi00310] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_0965 3-hydroxyacyl-CoA dehydrogenase, FadB K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:msi00220] D Msm_1226 ornithine carbamoyltransferase, ArgF K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Msm_1084 argininosuccinate synthase, ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Msm_0192 argininosuccinate lyase, ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Msm_1549 phosphoribosylformylglycinamidine (FGAM) synthase, PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Msm_1418 glutamine synthetase, GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Msm_0888 glutamate dehydrogenase (NADP+), GdhA K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0379 glutamate N-acetyltransferase, ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Msm_0375 acetylglutamate kinase, ArgB K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Msm_0860 aspartate-semialdehyde dehydrogenase, ArgC K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Msm_1368 N-acetylornithine aminotransferase, ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:msi00330] D Msm_1386 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Msm_0878 pyruvoyl-dependent arginine decarboxylase, PdaD K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D Msm_0876 arginase/agmatinase/formimionoglutamate hydrolase, SpeB K01480 speB; agmatinase [EC:3.5.3.11] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:msi00340] D Msm_1261 ATP phosphoribosyltransferase, HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Msm_1103 phosphoribosyl-ATP pyrophosphohydrolase, HisE K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Msm_1182 phosphoribosyl-AMP cyclohydrolase, HisI K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Msm_0858 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide (ProFAR) isomerase, HisA K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Msm_1636 ProFAR isomerase-related protein K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Msm_1159 glutamine amidotransferase, HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Msm_1364 imidazoleglycerol-phosphate synthase, HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Msm_1206 imidazoleglycerol-phosphate dehydrogenase, HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Msm_0653 histidinol-phosphate aminotransferase, HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Msm_1238 histidinol dehydrogenase, HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:msi00350] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0653 histidinol-phosphate aminotransferase, HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Msm_0987 tyrosine decarboxylase, MfnA K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00360 Phenylalanine metabolism [PATH:msi00360] D Msm_0387 coenzyme F390 synthetase, PaaK K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Msm_1714 coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0653 histidinol-phosphate aminotransferase, HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:msi00380] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_0965 3-hydroxyacyl-CoA dehydrogenase, FadB K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:msi00400] D Msm_0056 fructose-1,6-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Msm_0055 predicted alternative 3-dehydroquinate synthase K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24] D Msm_0231 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Msm_1179 shikimate 5-dehydrogenase, AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Msm_0835 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Msm_0273 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Msm_1474 chorismate synthase, AroC K01736 aroC; chorismate synthase [EC:4.2.3.5] D Msm_1146 anthranilate/para-aminobenzoate synthase component I, TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Msm_1145 anthranilate/para-aminobenzoate synthase component II, TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Msm_1144 anthranilate phosphoribosyltransferase, TrpD K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Msm_1142 tryptophan synthase, beta subunit, TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Msm_1143 indole-3-glycerol phosphate synthase, TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Msm_1141 tryptophan synthase, alpha subunit, TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Msm_1242 tryptophan synthase, beta subunit, TrpB K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Msm_0834 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D Msm_0641 prephenate dehydrogenase (NADP+) K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Msm_1052 prephenate dehydratase, PheA K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0653 histidinol-phosphate aminotransferase, HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:msi00410] D Msm_0987 tyrosine decarboxylase, MfnA K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D Msm_0140 conserved hypothetical protein Msm_0140 K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D Msm_1514 glycerol-3-phosphate cytidyltransferase, TagD K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15] C 00450 Selenocompound metabolism [PATH:msi00450] D Msm_0044 PLP dependent aminotransferase (aspartate) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Msm_0102 cobalamin-independent methionine synthase, MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Msm_0340 thioredoxin reductase (NADPH), TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Msm_0767 selenocysteine synthase, SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Msm_0071 methionyl-tRNA synthetase, MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D Msm_1337 glycine hydroxymethyltransferase, GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:msi00470] D Msm_1549 phosphoribosylformylglycinamidine (FGAM) synthase, PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Msm_0118 cell wall biosynthesis protein, MurD-like peptide ligase family K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Msm_1191 cell wall biosynthesis protein, MurD-like peptide ligase family K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Msm_1372 diaminopimelate epimerase, DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Msm_1371 diaminopimelate decarboxylase, LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis [PATH:msi00552] D Msm_1201 undecaprenyl-diphosphatase, UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Msm_1327 predicted CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47] D Msm_1324 glycosyltransferase, GT2 family K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355] D Msm_1515 lipopolysaccharide cholinephosphotransferase, LicD family K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] D Msm_1544 lipopolysaccharide cholinephosphotransferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] D Msm_1512 lipopolysaccharide cholinephosphotransferase, LicD family K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:msi00543] D Msm_1322 glycosyltransferase (glycogen phosphorylase), GT1 family K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D Msm_0270 serine acetyltransferase, CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:msi00730] D Msm_0644 thiamine biosynthesis protein, ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Msm_1388 thiamine biosynthesis protein, ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Msm_0289 phosphomethylpyrimidine kinase (HMPP-kinase), ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Msm_0264 cysteine desulfurase, NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Msm_0617 thiamine biosynthesis ATP pyrophosphatase, ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Msm_0916 hydroxyethylthiazole kinase, ThiM K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Msm_0917 thiamine monophosphate synthase, ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Msm_1283 thiamine monphosphate kinase, ThiL K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Msm_0737 adenylate kinase, AdkA K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:msi00740] D Msm_0973 GTP cyclohydrolase III, GGDN family K08096 gch3; GTP cyclohydrolase IIa [EC:3.5.4.29] D Msm_0184 creatinine amidohydrolase K14653 arfB; 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase [EC:3.5.1.102] D Msm_0065 riboflavin-specific deaminase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D Msm_1256 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D Msm_1296 riboflavin synthase, beta subunit, RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Msm_1622 riboflavin synthase, RibC K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Msm_1257 predicted transcriptional regulator of riboflavin/FAD biosynthetic operon K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D Msm_0859 glycerol-3-phosphate cytidylyltransferase K14656 ribL; FAD synthetase [EC:2.7.7.2] D Msm_0916 hydroxyethylthiazole kinase, ThiM K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Msm_0237 3-polyprenyl-4-hydroxybenzoate decarboxylase, UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:msi00750] D Msm_0214 threonine synthase (pyridoxal-phosphate dependent), ThrC K01733 thrC; threonine synthase [EC:4.2.3.1] D Msm_0371 predicted glutamine amidotransferase involved in pyridoxine biosynthesis, Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:msi00760] D Msm_0464 homoserine/aspartate dehydrogenase (NAD binding), glyceraldehyde-3-phosphate dehydrogenase-like superfamily K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D Msm_0494 quinolinate synthetase, subunit A, NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Msm_0491 nicotinate-nucleotide pyrophosphorylase (carboxylating), NadC K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Msm_1218 predicted acid phosphatase (survival protein), SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Msm_0129 nicotinamide mononucleotide adenylyltransferase, NadR K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D Msm_1171 ammonia-dependent NAD+ synthetase, NadE K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Msm_1792 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D Msm_1087 NAD-dependent protein deacetylase, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Msm_0879 Poly(P)/ATP NAD kinase, inositol monophosphatase family, PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:msi00770] D Msm_0686 acetolactate synthase (TPP-requiring), large subunit, IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Msm_1225 acetolactate synthase, large subunit (TPP-requiring), IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Msm_1224 acetolactate synthase, small subunit (regulatory), IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Msm_1222 ketol-acid reductoisomerase, IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Msm_1237 dihydroxy-acid dehydratase, IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Msm_0033 ketopantoate reductase, ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Msm_0060 predicted kinase (GHMP kinase family) K06982 pok; pantoate kinase [EC:2.7.1.169] D Msm_0140 conserved hypothetical protein Msm_0140 K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D Msm_0785 predicted phosphopantetheine adenylyltransferase (PPAT) K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Msm_0195 uncharacterized protein conserved in archaea K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] D Msm_1202 branched-chain-amino-acid aminotransferase, IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Msm_0987 tyrosine decarboxylase, MfnA K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00780 Biotin metabolism [PATH:msi00780] D Msm_0766 biotin-[acetyl-CoA-carboxylase] ligase/biotin operon regulator bifunctional protein, BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:msi00785] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00790 Folate biosynthesis [PATH:msi00790] D Msm_1056 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Msm_1055 coenzyme PQQ synthesis protein, SAM family K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Msm_0936 transcription regulator-related ATPase, ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Msm_1033 conserved hypothetical protein Msm_1033 K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39] D Msm_0985 conserved hypothetical protein Msm_0985 K09739 mptD; dihydroneopterin aldolase [EC:4.1.2.25] D Msm_0672 thiamine pyrophosphokinase K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Msm_0848 predicted sugar kinase, GHMP kinase family K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D Msm_1338 flavoprotein K18853 dmrX; dihydromethanopterin reductase (acceptor) [EC:1.5.99.15] D Msm_1406 molybdopterin cofactor biosynthesis protein A, MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Msm_1362 molybdenum cofactor biosynthesis protein C, MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Msm_0130 molybdenum cofactor biosynthesis protein, MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Msm_0820 molybdenum cofactor biosynthesis protein, MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Msm_1343 molybdenum cofactor biosynthesis protein, MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Msm_0116 MobA-related protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Msm_0240 molybdopterin-guanine dinucleotide biosynthesis protein A, MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:msi00670] D Msm_1337 glycine hydroxymethyltransferase, GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Msm_1734 predicted thymidylate synthase, ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:msi00860] D Msm_1452 glutamyl-tRNA synthetase, GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Msm_0967 glutamyl-tRNA reductase, HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Msm_1233 glutamate-1-semialdehyde 2,1-aminomutase, HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Msm_1476 porphobilinogen synthase, HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Msm_0881 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Msm_1504 uroporphyrinogen III synthase, HemD K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Msm_1262 flavodoxin (protoporphyrinogen oxidase) K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Msm_1550 uroporphyrin-III C-methyltransferase, CobA K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Msm_0968 bifunctional precorrin-2 oxidase/chelatase (siroheme synthase), CysG K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Msm_1281 sirohydrochlorin cobaltochelatase-related protein K22011 cfbA; sirohydrochlorin cobalto/nickelchelatase [EC:4.99.1.3 4.99.1.11] D Msm_1351 precorrin-2 C20-methyltransferase, CbiL K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Msm_1273 cobalt precorrin-3B C17-methyltransferase, CbiH K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Msm_0101 precorrin-3 methylase, CbiF K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Msm_1267 cobalamin biosynthesis protein G, CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Msm_0896 precorrin-6X reductase, CbiJ K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Msm_0837 cobalamin biosynthesis protein D, CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Msm_0238 precorrin-6B methylase, CbiT K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D Msm_1167 cobalt precorrin-6Y C5,15-methyltransferase, CbiE K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D Msm_1234 cobalt-precorrin-8X methylmutase, CbiC K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Msm_1215 cobyrinic acid a,c-diamide synthase, CbiA K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Msm_1715 magnesium chelatase subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D Msm_1117 cobalamin biosynthesis protein N, CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D Msm_1565 cobyric acid synthase, CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Msm_1266 cobalamin biosynthesis protein D, CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Msm_0825 adenosylcobinamide amidohydrolase, CbiZ K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90] D Msm_1005 GTP:adenosylcobinamide-phosphate guanylyltransferase K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62] D Msm_0933 cobalamin-5-phosphate synthase, CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Msm_1707 nitrogenase NifH subunit, NifH K21610 cfbC; Ni-sirohydrochlorin a,c-diamide reductive cyclase subunit CfbC [EC:6.3.3.7] D Msm_1160 nitrogenase molybdenum-iron protein, NifD K21611 cfbD; Ni-sirohydrochlorin a,c-diamide reductive cyclase subunit CfbD [EC:6.3.3.7] D Msm_0880 UDP-N-acetylmuramyl tripeptide synthetase (Mur ligase) K21612 cfbE; coenzyme F430 synthetase [EC:6.4.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D Msm_0237 3-polyprenyl-4-hydroxybenzoate decarboxylase, UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:msi00900] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_1561 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D Msm_0227 hydroxymethylglutaryl-CoA (HMG-CoA) reductase, HmgA K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D Msm_1439 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D Msm_1440 predicted kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D Msm_1192 conserved hypothetical protein Msm_1192 K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182] D Msm_1155 conserved hypothetical protein Msm_1155 K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182] D Msm_1286 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, UbiD K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126] D Msm_0237 3-polyprenyl-4-hydroxybenzoate decarboxylase, UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Msm_1441 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Msm_1443 bifunctional short chain isoprenyl diphosphate synthase, IdsA K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Msm_0096 undecaprenyl pyrophosphate synthase, UppS K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation D Msm_0965 3-hydroxyacyl-CoA dehydrogenase, FadB K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:msi00523] D Msm_1307 dTDP-glucose pyrophosphorylase, RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Msm_0655 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Msm_1309 dTDP-D-glucose 4,6-dehydratase, RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Msm_1308 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Msm_1304 dTDP-4-dehydrorhamnose reductase, RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Msm_1309 dTDP-D-glucose 4,6-dehydratase, RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:msi00261] D Msm_0832 aspartokinase, alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4] D Msm_0829 aspartate-semialdehyde dehydrogenase, Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Msm_0831 dihydrodipicolinate synthase, DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Msm_0830 dihydrodipicolinate reductase, DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:msi00521] D Msm_0648 phosphomannomutase, ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Msm_0940 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Msm_1307 dTDP-glucose pyrophosphorylase, RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Msm_0655 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Msm_1309 dTDP-D-glucose 4,6-dehydratase, RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Msm_1308 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Msm_1304 dTDP-4-dehydrorhamnose reductase, RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:msi00525] D Msm_1307 dTDP-glucose pyrophosphorylase, RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Msm_0655 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Msm_1309 dTDP-D-glucose 4,6-dehydratase, RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:msi00401] D Msm_0641 prephenate dehydrogenase (NADP+) K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0653 histidinol-phosphate aminotransferase, HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Msm_1146 anthranilate/para-aminobenzoate synthase component I, TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Msm_1145 anthranilate/para-aminobenzoate synthase component II, TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:msi00999] D Msm_1340 S-adenosylmethionine synthetase, MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Msm_1179 shikimate 5-dehydrogenase, AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:msi00362] D Msm_0688 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D Msm_0237 3-polyprenyl-4-hydroxybenzoate decarboxylase, UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D Msm_0688 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:msi00633] D Msm_0561 formate dehydrogenase, iron-sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D Msm_0559 pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Msm_0560 pyruvate:ferredoxin oxidoreductase, beta subunit, PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Msm_0557 pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Msm_0558 pyruvate:ferredoxin oxidoreductase, delta subunit, PorD K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation D Msm_0965 3-hydroxyacyl-CoA dehydrogenase, FadB K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00363 Bisphenol degradation C 00621 Dioxin degradation D Msm_0688 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:msi03020] D Msm_0910 DNA-dependent RNA polymerase, subunit B', RpoB K03044 rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] D Msm_0911 DNA-dependent RNA polymerase, subunit B, RpoB K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6] D Msm_0909 DNA-dependent RNA polymerase, subunit A', RpoA K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D Msm_0908 DNA-dependent RNA polymerase, subunit A, RpoA K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D Msm_1428 DNA-directed RNA polymerase, subunit D, RpoD K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D Msm_1356 DNA-directed RNA polymerase, subunit L, RpoL K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D Msm_0197 DNA-dependent RNA polymerase, subunit E, RpoE K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D Msm_1376 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D Msm_0912 DNA-dependent RNA polymerase, subunit H, RpoH K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D Msm_1433 DNA-directed RNA polymerase, subunit K, RpoK K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D Msm_1432 DNA-directed RNA polymerase, subunit N, RpoN K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D Msm_1631 predicted DNA-directed RNA polymerase II, subunit RPC10 K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:msi03022] D Msm_0424 transcription initiation factor TFIIB (zinc-binding) K03124 TFIIB; transcription initiation factor TFIIB D Msm_0720 transcription initiation factor TFIID TATA binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Msm_0631 transcription initiation factor IIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:msi03010] D Msm_1437 ribosomal protein S2p K02967 RP-S2; small subunit ribosomal protein S2 D Msm_0756 ribosomal protein S3p K02982 RP-S3; small subunit ribosomal protein S3 D Msm_1426 ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4 D Msm_0741 ribosomal protein S5p, RpsE K02988 RP-S5; small subunit ribosomal protein S5 D Msm_0900 ribosomal protein S7p K02992 RP-S7; small subunit ribosomal protein S7 D Msm_0746 ribosomal protein S8p K02994 RP-S8; small subunit ribosomal protein S8 D Msm_1431 ribosomal protein S9p K02996 RP-S9; small subunit ribosomal protein S9 D Msm_0897 ribosomal protein S10p K02946 RP-S10; small subunit ribosomal protein S10 D Msm_1427 ribosomal protein S11p K02948 RP-S11; small subunit ribosomal protein S11 D Msm_0901 ribosomal protein S12p K02950 RP-S12; small subunit ribosomal protein S12 D Msm_1425 ribosomal protein S13p K02952 RP-S13; small subunit ribosomal protein S13 D Msm_0747 ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14 D Msm_1194 ribosomal protein S15p K02956 RP-S15; small subunit ribosomal protein S15 D Msm_0752 ribosomal protein S17p K02961 RP-S17; small subunit ribosomal protein S17 D Msm_0758 ribosomal protein S19p K02965 RP-S19; small subunit ribosomal protein S19 D Msm_0661 small subunit ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D Msm_0749 ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D Msm_0201 ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D Msm_1486 ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D Msm_0833 ribosomal protein S17a K02962 RP-S17e; small subunit ribosomal protein S17e D Msm_0709 ribosomal protein S16a K02966 RP-S19e; small subunit ribosomal protein S19e D Msm_0194 ribosomal protein S24ae K02974 RP-S24e; small subunit ribosomal protein S24e D Msm_1134 ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D Msm_0193 ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Msm_0205 ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D Msm_0622 ribosomal protein L1p K02863 RP-L1; large subunit ribosomal protein L1 D Msm_0759 ribosomal protein L2p K02886 RP-L2; large subunit ribosomal protein L2 D Msm_0762 ribosomal protein L3p K02906 RP-L3; large subunit ribosomal protein L3 D Msm_0748 ribosomal protein L5p K02931 RP-L5; large subunit ribosomal protein L5 D Msm_0745 ribosomal protein L6p, RplF K02933 RP-L6; large subunit ribosomal protein L6 D Msm_0621 ribosomal protein L10p K02864 RP-L10; large subunit ribosomal protein L10 D Msm_0623 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Msm_0620 ribosomal protein L12p K02869 RP-L12; large subunit ribosomal protein L12 D Msm_1430 ribosomal protein L13p K02871 RP-L13; large subunit ribosomal protein L13 D Msm_0751 ribosomal protein L14p K02874 RP-L14; large subunit ribosomal protein L14 D Msm_0739 ribosomal protein L15p K02876 RP-L15; large subunit ribosomal protein L15 D Msm_0742 ribosomal protein L18p, RplR K02881 RP-L18; large subunit ribosomal protein L18 D Msm_0757 ribosomal protein L22p K02890 RP-L22; large subunit ribosomal protein L22 D Msm_0760 ribosomal protein L23p K02892 RP-L23; large subunit ribosomal protein L23 D Msm_0750 ribosomal protein L24p K02895 RP-L24; large subunit ribosomal protein L24 D Msm_0755 ribosomal protein L29p K02904 RP-L29; large subunit ribosomal protein L29 D Msm_0740 ribosomal protein L30p K02907 RP-L30; large subunit ribosomal protein L30 D Msm_0761 ribosomal protein L1e K02930 RP-L4e; large subunit ribosomal protein L4e D Msm_0206 ribosomal protein L7ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Msm_0989 ribosomal protein L10e K02866 RP-L10e; large subunit ribosomal protein L10e D Msm_0733 ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D Msm_0298 ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D Msm_1429 ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D Msm_0743 ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D Msm_1377 ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D Msm_0204 ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D Msm_0907 ribosomal protein L17Ae K02908 RP-L30e; large subunit ribosomal protein L30e D Msm_0705 ribosomal protein L31a K02910 RP-L31e; large subunit ribosomal protein L31e D Msm_0744 ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D Msm_0735 ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e D Msm_0181 ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D Msm_1630 ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D Msm_0706 ribosomal protein L39a K02924 RP-L39e; large subunit ribosomal protein L39e D Msm_0125 ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Msm_1135 ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D Msm_0703 ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D Msm_1801 16S ribosomal RNA -1 K01977 16SrRNA; 16S ribosomal RNA D Msm_1806 16S ribosomal RNA -2 K01977 16SrRNA; 16S ribosomal RNA D Msm_1799 23S ribosomal RNA -1 K01980 23SrRNA; 23S ribosomal RNA D Msm_1805 23S ribosomal RNA -2 K01980 23SrRNA; 23S ribosomal RNA D Msm_1798 5S ribosomal RNA -1 K01985 5SrRNA; 5S ribosomal RNA D Msm_1803 5S ribosomal RNA -2B K01985 5SrRNA; 5S ribosomal RNA D Msm_1804 5S ribosomal RNA -2A K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:msi00970] D Msm_1796 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Msm_1800 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Msm_1828 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Msm_1829 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Msm_1830 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Msm_1832 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Msm_1826 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Msm_1818 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Msm_1797 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Msm_1802 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Msm_1824 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Msm_1835 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Msm_1834 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Msm_1822 tRNA-His K14226 tRNA-His; tRNA His D Msm_1809 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Msm_1823 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Msm_1808 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Msm_1836 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Msm_1817 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Msm_1825 tRNA-Met K14230 tRNA-Met; tRNA Met D Msm_1827 tRNA-Met K14230 tRNA-Met; tRNA Met D Msm_1813 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Msm_1820 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Msm_1811 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1837 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1833 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1815 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1816 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Msm_1807 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Msm_1821 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Msm_1819 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Msm_1831 tRNA-Val K14237 tRNA-Val; tRNA Val D Msm_1814 tRNA-Val K14237 tRNA-Val; tRNA Val D Msm_1452 glutamyl-tRNA synthetase, GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Msm_1253 glutamyl-tRNA (Gln) amidotransferase subunit A, GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Msm_1101 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase, B subunit, GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Msm_0156 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Msm_0334 L-asparaginase, GatD K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D Msm_0335 glutamyl-tRNA(Gln) amidotransferase, subunit E, GatE K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D Msm_0619 alanyl-tRNA synthetase, AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Msm_1236 aspartyl-tRNA synthetase, AspS K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Msm_0403 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Msm_1214 threonyl-tRNA synthetase, ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Msm_1710 seryl-tRNA synthetase, SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Msm_0767 selenocysteine synthase, SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Msm_0268 cysteinyl-tRNA synthetase, CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Msm_0071 methionyl-tRNA synthetase, MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Msm_0275 valyl-tRNA synthetase, ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Msm_1172 leucyl-tRNA synthetase, LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Msm_1341 isoleucyl-tRNA synthetase, IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Msm_1387 lysyl-tRNA synthetase (class I), LysS K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Msm_1231 arginyl-tRNA synthetase, ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Msm_0287 prolyl-tRNA synthetase, ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Msm_1181 histidyl-tRNA synthetase, HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Msm_1478 phenylalanyl-tRNA synthetase, PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Msm_0277 phenylalanyl-tRNA synthetase, beta subunit, PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Msm_0513 tyrosyl-tRNA synthetase, TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Msm_0216 tryptophanyl-tRNA synthetase, TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:msi03060] D Msm_0738 preprotein translocase, SecY subunit, SecY K03076 secY; preprotein translocase subunit SecY D Msm_1360 signal recognition particle GTPase SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Msm_1812 7S ribosomal RNA K01983 ffs; SRP RNA D Msm_0701 signal recognition particle GTPase SRP54 K03110 ftsY; fused signal recognition particle receptor D Msm_0625 protein translocation complex sec61, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Msm_1501 signal recognition particle, subunit SRP19 K03105 SRP19; signal recognition particle subunit SRP19 D Msm_1170 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Msm_1232 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:msi04122] D Msm_0264 cysteine desulfurase, NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Msm_0130 molybdenum cofactor biosynthesis protein, MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Msm_1406 molybdopterin cofactor biosynthesis protein A, MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Msm_1362 molybdenum cofactor biosynthesis protein C, MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Msm_0820 molybdenum cofactor biosynthesis protein, MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Msm_0617 thiamine biosynthesis ATP pyrophosphatase, ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Msm_0552 sulfur transfer protein involved in thiamine biosynthesis K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:msi03050] D Msm_0354 ATP-dependent 26S proteasome regulatory subunit, RPT1 K03420 psmR; proteasome regulatory subunit D Msm_0245 proteasome, alpha subunit, PsmA K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Msm_1037 proteasome, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:msi03018] D Msm_1357 predicted RNA-binding protein K07573 CSL4; exosome complex component CSL4 D Msm_0243 RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D Msm_0241 ribonuclease PH-related protein K12589 RRP42; exosome complex component RRP42 D Msm_0242 ribonuclease PH, Rph K11600 RRP41; exosome complex component RRP41 D Msm_1435 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Msm_1498 helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Msm_1442 predicted RNA hydrolase, metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] D Msm_1109 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Msm_1424 polyphosphate kinase, ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:msi03030] D Msm_0427 DNA primase (type), DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D Msm_0979 ribonuclease HII, RnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Msm_1041 DNA-dependent DNA polymerase I, PolB1 K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Msm_1481 DNA-directed DNA polymerase, family B, PolB K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Msm_1271 DNA polymerase II, small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D Msm_1384 DNA polymerase II, large subunit, PolC K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D Msm_0510 predicted ATPase involved in DNA replication control, MCM2/3/5 family K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Msm_0075 DNA primase, small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D Msm_0073 DNA primase, large subunit (eukaryotic-type) K18882 priL; DNA primase large subunit D Msm_1332 ssDNA-binding protein K07466 RFA1; replication factor A1 D Msm_1137 DNA polymerase sliding clamp subunit, PCNA family, Pcn K04802 PCNA; proliferating cell nuclear antigen D Msm_1176 replication factor C, small subunit, RfcS K04801 rfcS; replication factor C small subunit D Msm_1177 replication factor C, large subunit, RfcL K04800 rfcL; replication factor C large subunit D Msm_0725 DNA repair flap structure-specific 5'-3' endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Msm_0645 ATP-dependent DNA ligase, Cdc9 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:msi03410] D Msm_1365 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Msm_0272 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Msm_1137 DNA polymerase sliding clamp subunit, PCNA family, Pcn K04802 PCNA; proliferating cell nuclear antigen D Msm_0725 DNA repair flap structure-specific 5'-3' endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Msm_0645 ATP-dependent DNA ligase, Cdc9 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Msm_1479 exodeoxyribonuclease, XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Msm_0963 endonuclease IV, xylose isomerase-like TIM barrel family, Nfo K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Msm_1193 single-stranded DNA-specific exonuclease, DHH family K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Msm_1500 ssDNA exonuclease, RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:msi03420] D Msm_1581 excinuclease ABC, subunit A, UvrA K03701 uvrA; excinuclease ABC subunit A D Msm_1579 excinuclease ABC, subunit B, UvrB K03702 uvrB; excinuclease ABC subunit B D Msm_1695 excinuclease ABC, subunit C, UvrC K03703 uvrC; excinuclease ABC subunit C D Msm_0058 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Msm_0113 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Msm_1332 ssDNA-binding protein K07466 RFA1; replication factor A1 D Msm_1137 DNA polymerase sliding clamp subunit, PCNA family, Pcn K04802 PCNA; proliferating cell nuclear antigen D Msm_0645 ATP-dependent DNA ligase, Cdc9 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:msi03430] D Msm_0524 DNA mismatch repair ATPase, MutS K07456 mutS2; DNA mismatch repair protein MutS2 D Msm_0058 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Msm_0113 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Msm_0001 exoribonuclease VII, large subunit, XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Msm_1193 single-stranded DNA-specific exonuclease, DHH family K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Msm_1500 ssDNA exonuclease, RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Msm_1137 DNA polymerase sliding clamp subunit, PCNA family, Pcn K04802 PCNA; proliferating cell nuclear antigen D Msm_1332 ssDNA-binding protein K07466 RFA1; replication factor A1 D Msm_0645 ATP-dependent DNA ligase, Cdc9 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination [PATH:msi03440] D Msm_1193 single-stranded DNA-specific exonuclease, DHH family K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Msm_1500 ssDNA exonuclease, RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Msm_1315 predicted transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Msm_0540 predicted transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Msm_1332 ssDNA-binding protein K07466 RFA1; replication factor A1 C 03450 Non-homologous end-joining D Msm_0725 DNA repair flap structure-specific 5'-3' endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D Msm_0196 DNA-dependent RNA polymerase, subunit E, RpoE K15171 SUPT4H1; transcription elongation factor SPT4 D Msm_0624 transcription antiterminator, NusG K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:msi02010] D Msm_1469 nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component, TauA K15553 ssuA; sulfonate transport system substrate-binding protein D Msm_0291 nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC K15554 ssuC; sulfonate transport system permease protein D Msm_0290 nitrate/sulfonate/bicarbonate ABC transporter, ATPase component, TauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Msm_1609 molybdate ABC transporter, substrate-binding component, ModA K02020 modA; molybdate transport system substrate-binding protein D Msm_1610 molybdate ABC transporter, permease component, ModC K02018 modB; molybdate transport system permease protein D Msm_1611 molybdate ABC transporter, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Msm_0991 nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component K05845 opuC; osmoprotectant transport system substrate-binding protein D Msm_0990 nitrate/sulfonate/bicarbonate ABC transporter, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Msm_0568 phosphate ABC transporter, phosphate-binding component, PstS K02040 pstS; phosphate transport system substrate-binding protein D Msm_0567 phosphate ABC transporter, permease component, PstC K02037 pstC; phosphate transport system permease protein D Msm_0566 phosphate ABC transporter, permease component, PstA K02038 pstA; phosphate transport system permease protein D Msm_0565 phosphate ABC transporter, ATPase component, PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Msm_1619 cobalt ABC transporter, substrate-binding component, CbiN K02009 cbiN; cobalt/nickel transport protein D Msm_0584 cobalt ABC transporter, permease component K02009 cbiN; cobalt/nickel transport protein D Msm_0583 cobalt ABC transporter, permease component, CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Msm_1618 cobalamin biosynthesis protein M, CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Msm_1488 cobalt ABC transporter, permease component, CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Msm_1620 cobalt ABC transporter, permease component, CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Msm_0585 cobalt ABC transporter, permease component, CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Msm_1621 cobalt ABC transporter, ATPase component, CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Msm_0586 cobalt ABC transporter, ATPase component, CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Msm_0429 biotin biosynthesis protein, BioY K03523 bioY; biotin transport system substrate-specific component D Msm_0771 cobalt ABC transporter, permease component, CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Msm_1325 predicted polysaccharide/polyol phosphate ABC transporter, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Msm_1593 polysaccharide/polyol phosphate ABC transporter, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Msm_1326 polysaccharide/polyol phosphate ABC transporter, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Msm_1592 polysaccharide/polyol phosphate ABC transporter, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Msm_0594 multidrug ABC transporter, permease component K19310 bcrB; bacitracin transport system permease protein D Msm_0595 multidrug ABC transporter, permease component K19310 bcrB; bacitracin transport system permease protein D Msm_0593 multidrug ABC transporter, ATPase component, CcmA K19309 bcrA; bacitracin transport system ATP-binding protein D Msm_0774 multidrug ABC transporter, ATPase component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Msm_0773 multidrug ABC transporter, ATPase component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:msi03070] D Msm_0738 preprotein translocase, SecY subunit, SecY K03076 secY; preprotein translocase subunit SecY D Msm_0701 signal recognition particle GTPase SRP54 K03110 ftsY; fused signal recognition particle receptor D Msm_1360 signal recognition particle GTPase SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:msi02020] D Msm_0568 phosphate ABC transporter, phosphate-binding component, PstS K02040 pstS; phosphate transport system substrate-binding protein D Msm_1477 ATP:dephospho-CoA triphosphoribosyl transferase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D Msm_0233 nitrogen regulatory protein P-II, GlnK K04751 glnB; nitrogen regulatory protein P-II 1 D Msm_1418 glutamine synthetase, GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_0853 UDP-N-acetylglucosamine 2-epimerase, WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Msm_1303 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:msi02024] D Msm_1146 anthranilate/para-aminobenzoate synthase component I, TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Msm_1145 anthranilate/para-aminobenzoate synthase component II, TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Msm_0374 long-chain fatty-acid-CoA ligase (AMP-forming), CaiC K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Msm_0300 peptide/nickel ABC transporter, solute-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Msm_0301 peptide/nickel ABC transporter, permease component, DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D Msm_0302 peptide/nickel ABC transporter, permease component, DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Msm_0303 peptide/nickel ABC transporter, ATP-binding component, DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D Msm_0304 peptide/nickel ABC transporter, ATP-binding component, DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D Msm_0738 preprotein translocase, SecY subunit, SecY K03076 secY; preprotein translocase subunit SecY D Msm_0701 signal recognition particle GTPase SRP54 K03110 ftsY; fused signal recognition particle receptor D Msm_1360 signal recognition particle GTPase SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Msm_1435 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance [PATH:msi01502] D Msm_0360 cell wall biosynthesis protein, phospho-N-acetylmuramoyl-pentapeptide-transferase family K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Msm_0638 cell wall biosynthesis protein, UDP-glycosyltransferase family K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:msi01000] C 01001 Protein kinases [BR:msi01001] D Msm_1198 O-sialoglycoprotein endopeptidase K15904 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32 [EC:2.3.1.234 2.7.11.1] D Msm_0952 serine/threonine protein kinase, RIO1 family K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:msi01009] D Msm_0511 translation initiation factor 2, beta subunit (aIF-2beta) K03238 EIF2S2; translation initiation factor 2 subunit 2 D Msm_0719 phosphoserine phosphatase, HAD family, SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:msi01002] D Msm_0146 type IV leader peptidase K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D Msm_0362 coenzyme F420-reducing hydrogenase (Ni,Fe-hydrogenase maturation protease), delta subunit K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D Msm_0343 GMP synthase (glutamine-hydrolysing), subunit A, GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Msm_0345 GMP synthase (glutamine-hydrolysing), PP-ATPase domain/subunit, GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Msm_1704 glutamine phosphoribosylpyrophosphate amidotransferase, PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Msm_1551 glucosamine--fructose-6-phosphate aminotransferase, GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Msm_0160 asparagine synthetase, AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Msm_0984 sortase (surface protein transpeptidase), SrtA K07284 srtA; sortase A [EC:3.4.22.70] D Msm_1148 predicted metal-dependent membrane protease K07052 K07052; CAAX protease family protein D Msm_1180 predicted metal-dependent membrane protease K07052 K07052; CAAX protease family protein D Msm_0292 predicted metal-dependent membrane protease K07052 K07052; CAAX protease family protein D Msm_0803 predicted metal-dependent membrane protease, CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D Msm_1120 methionine aminopeptidase, Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Msm_0472 Xaa-Pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Msm_1174 heat shock protein HtpX (Zn-dependent) K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Msm_1203 Zn-dependent protease, peptidase M48 family K23010 OMA1; metalloendopeptidase OMA1, mitochondrial [EC:3.4.24.-] D Msm_1754 predicted ATP-dependent protease La, Lon K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Msm_1569 ATP-dependent protease La, LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D Msm_1232 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Msm_0245 proteasome, alpha subunit, PsmA K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Msm_1037 proteasome, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Msm_0522 collagenase, peptidase family U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Msm_1705 predicted collagenase, peptidase family U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Msm_0523 collagenase, peptidase family U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Msm_0947 predicted zinc metalloprotease, modulator of DNA gyrase K03592 pmbA; PmbA protein D Msm_0866 Zn metalloprotease, TldD K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:msi01003] D Msm_0066 N-acetylglucosamine-1-phosphate transferase, GT4 family K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D Msm_0716 oligosaccharyl transferase, STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D Msm_1322 glycosyltransferase (glycogen phosphorylase), GT1 family K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D Msm_1324 glycosyltransferase, GT2 family K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355] D Msm_1294 glycosyltransferase, GT2 family K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:msi01005] D Msm_1627 glycosyltransferase, GT2 family K12999 rgpI; glucosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:msi01011] D Msm_1190 cell wall biosynthesis protein, UDP-N-acetylmuramate-alanine ligase family K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Msm_0118 cell wall biosynthesis protein, MurD-like peptide ligase family K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Msm_1191 cell wall biosynthesis protein, MurD-like peptide ligase family K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Msm_0360 cell wall biosynthesis protein, phospho-N-acetylmuramoyl-pentapeptide-transferase family K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Msm_0638 cell wall biosynthesis protein, UDP-glycosyltransferase family K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Msm_1201 undecaprenyl-diphosphatase, UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Msm_0984 sortase (surface protein transpeptidase), SrtA K07284 srtA; sortase A [EC:3.4.22.70] C 01004 Lipid biosynthesis proteins [BR:msi01004] D Msm_0330 acetyl-CoA synthetase, AMP-forming-related, Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Msm_1471 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Msm_0374 long-chain fatty-acid-CoA ligase (AMP-forming), CaiC K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:msi01006] D Msm_1443 bifunctional short chain isoprenyl diphosphate synthase, IdsA K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] C 01007 Amino acid related enzymes [BR:msi01007] D Msm_1387 lysyl-tRNA synthetase (class I), LysS K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Msm_1452 glutamyl-tRNA synthetase, GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Msm_0513 tyrosyl-tRNA synthetase, TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Msm_0216 tryptophanyl-tRNA synthetase, TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Msm_0268 cysteinyl-tRNA synthetase, CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Msm_1231 arginyl-tRNA synthetase, ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Msm_0071 methionyl-tRNA synthetase, MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Msm_1341 isoleucyl-tRNA synthetase, IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Msm_0275 valyl-tRNA synthetase, ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Msm_1172 leucyl-tRNA synthetase, LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Msm_1236 aspartyl-tRNA synthetase, AspS K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Msm_1181 histidyl-tRNA synthetase, HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Msm_0403 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Msm_1710 seryl-tRNA synthetase, SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Msm_0287 prolyl-tRNA synthetase, ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Msm_1214 threonyl-tRNA synthetase, ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Msm_0619 alanyl-tRNA synthetase, AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Msm_1478 phenylalanyl-tRNA synthetase, PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Msm_0277 phenylalanyl-tRNA synthetase, beta subunit, PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Msm_0788 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_0610 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Msm_1455 aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Msm_0653 histidinol-phosphate aminotransferase, HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Msm_0044 PLP dependent aminotransferase (aspartate) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Msm_1368 N-acetylornithine aminotransferase, ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Msm_1233 glutamate-1-semialdehyde 2,1-aminomutase, HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Msm_1202 branched-chain-amino-acid aminotransferase, IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Msm_1030 predicted pyridoxal phosphate-dependent enzyme K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:msi03000] D Msm_1332 ssDNA-binding protein K07466 RFA1; replication factor A1 D Msm_0531 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Msm_0720 transcription initiation factor TFIID TATA binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Msm_1032 transcriptional regulator, Lrp family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Msm_1126 predicted transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Msm_1107 predicted transcriptional regulator K07721 K07721; ArsR family transcriptional regulator D Msm_1250 predicted transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Msm_0218 iron dependent transcriptional regulator (Fe2+-binding) K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Msm_0766 biotin-[acetyl-CoA-carboxylase] ligase/biotin operon regulator bifunctional protein, BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Msm_1417 conserved hypothetical protein Msm_1417 K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI D Msm_1445 predicted transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D Msm_0883 orotate phosphoribosyltransferase K26599 gfcR; HTH-type transcriptional regulator, activator of D-glucose/D-fructose catabolism D Msm_1207 molybdate transport system regulatory protein K02019 modE; molybdate transport system regulatory protein D Msm_0453 predicted transcriptional regulator K07728 K07728; putative transcriptional regulator D Msm_1150 predicted transcriptional regulator K07729 K07729; putative transcriptional regulator D Msm_1499 predicted transcriptional regulator K07730 K07730; putative transcriptional regulator D Msm_0364 transcriptional regulator (nickel-responsive), NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Msm_0959 conserved hypothetical protein Msm_0959 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor C 03021 Transcription machinery [BR:msi03021] D Msm_0424 transcription initiation factor TFIIB (zinc-binding) K03124 TFIIB; transcription initiation factor TFIIB D Msm_0720 transcription initiation factor TFIID TATA binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Msm_0631 transcription initiation factor IIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D Msm_0196 DNA-dependent RNA polymerase, subunit E, RpoE K15171 SUPT4H1; transcription elongation factor SPT4 D Msm_0624 transcription antiterminator, NusG K15172 SUPT5H; transcription elongation factor SPT5 D Msm_0906 transcription termination factor, NusA K02600 nusA; transcription termination/antitermination protein NusA D Msm_0909 DNA-dependent RNA polymerase, subunit A', RpoA K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D Msm_0908 DNA-dependent RNA polymerase, subunit A, RpoA K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D Msm_0910 DNA-dependent RNA polymerase, subunit B', RpoB K03044 rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] D Msm_0911 DNA-dependent RNA polymerase, subunit B, RpoB K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6] D Msm_1428 DNA-directed RNA polymerase, subunit D, RpoD K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D Msm_0197 DNA-dependent RNA polymerase, subunit E, RpoE K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D Msm_1376 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D Msm_0912 DNA-dependent RNA polymerase, subunit H, RpoH K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D Msm_1433 DNA-directed RNA polymerase, subunit K, RpoK K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D Msm_1356 DNA-directed RNA polymerase, subunit L, RpoL K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D Msm_1432 DNA-directed RNA polymerase, subunit N, RpoN K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D Msm_1631 predicted DNA-directed RNA polymerase II, subunit RPC10 K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D Msm_1354 DNA-directed RNA polymerase subunit M, RpoM K03057 tfs; transcription factor S D Msm_1763 predicted DNA-directed RNA polymerase, subunit M, RpoM K03057 tfs; transcription factor S D Msm_1720 DNA-directed RNA polymerase, subunit M, RpoM K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:msi03019] D Msm_0196 DNA-dependent RNA polymerase, subunit E, RpoE K15171 SUPT4H1; transcription elongation factor SPT4 D Msm_0624 transcription antiterminator, NusG K15172 SUPT5H; transcription elongation factor SPT5 D Msm_0642 cell division control protein Cdc48, AAA+ ATPase family K13525 VCP; transitional endoplasmic reticulum ATPase D Msm_0640 cell division protein (RNA-binding), PelA K06965 PELO; protein pelota D Msm_0891 peptide chain release factor eRF, subunit 1 K03265 ETF1; peptide chain release factor subunit 1 D Msm_0898 translation elongation factor 1-alpha (EF-Tu) K03231 EEF1A; elongation factor 1-alpha D Msm_1357 predicted RNA-binding protein K07573 CSL4; exosome complex component CSL4 D Msm_0243 RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D Msm_0242 ribonuclease PH, Rph K11600 RRP41; exosome complex component RRP41 D Msm_0241 ribonuclease PH-related protein K12589 RRP42; exosome complex component RRP42 D Msm_0176 ribonuclease III (dsRNA-specific), Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3] D Msm_1442 predicted RNA hydrolase, metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] D Msm_1498 helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Msm_1435 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Msm_1109 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Msm_1424 polyphosphate kinase, ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Msm_1583 archaea-specific helicase K03725 K03725; putative ATP-dependent RNA helicase [EC:5.6.2.-] C 03041 Spliceosome C 03011 Ribosome [BR:msi03011] D Msm_0661 small subunit ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D Msm_0749 ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D Msm_0201 ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D Msm_1486 ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D Msm_0833 ribosomal protein S17a K02962 RP-S17e; small subunit ribosomal protein S17e D Msm_0709 ribosomal protein S16a K02966 RP-S19e; small subunit ribosomal protein S19e D Msm_0194 ribosomal protein S24ae K02974 RP-S24e; small subunit ribosomal protein S24e D Msm_1134 ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D Msm_0193 ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Msm_0205 ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D Msm_0761 ribosomal protein L1e K02930 RP-L4e; large subunit ribosomal protein L4e D Msm_0206 ribosomal protein L7ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Msm_0989 ribosomal protein L10e K02866 RP-L10e; large subunit ribosomal protein L10e D Msm_0733 ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D Msm_0298 ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D Msm_1429 ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D Msm_0743 ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D Msm_1377 ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D Msm_0204 ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D Msm_0907 ribosomal protein L17Ae K02908 RP-L30e; large subunit ribosomal protein L30e D Msm_0705 ribosomal protein L31a K02910 RP-L31e; large subunit ribosomal protein L31e D Msm_0744 ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D Msm_0735 ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e D Msm_0181 ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D Msm_1630 ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D Msm_0706 ribosomal protein L39a K02924 RP-L39e; large subunit ribosomal protein L39e D Msm_0125 ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Msm_1135 ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D Msm_1437 ribosomal protein S2p K02967 RP-S2; small subunit ribosomal protein S2 D Msm_0756 ribosomal protein S3p K02982 RP-S3; small subunit ribosomal protein S3 D Msm_1426 ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4 D Msm_0741 ribosomal protein S5p, RpsE K02988 RP-S5; small subunit ribosomal protein S5 D Msm_0900 ribosomal protein S7p K02992 RP-S7; small subunit ribosomal protein S7 D Msm_0746 ribosomal protein S8p K02994 RP-S8; small subunit ribosomal protein S8 D Msm_1431 ribosomal protein S9p K02996 RP-S9; small subunit ribosomal protein S9 D Msm_0897 ribosomal protein S10p K02946 RP-S10; small subunit ribosomal protein S10 D Msm_1427 ribosomal protein S11p K02948 RP-S11; small subunit ribosomal protein S11 D Msm_0901 ribosomal protein S12p K02950 RP-S12; small subunit ribosomal protein S12 D Msm_1425 ribosomal protein S13p K02952 RP-S13; small subunit ribosomal protein S13 D Msm_0747 ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14 D Msm_1194 ribosomal protein S15p K02956 RP-S15; small subunit ribosomal protein S15 D Msm_0752 ribosomal protein S17p K02961 RP-S17; small subunit ribosomal protein S17 D Msm_0758 ribosomal protein S19p K02965 RP-S19; small subunit ribosomal protein S19 D Msm_0622 ribosomal protein L1p K02863 RP-L1; large subunit ribosomal protein L1 D Msm_0759 ribosomal protein L2p K02886 RP-L2; large subunit ribosomal protein L2 D Msm_0762 ribosomal protein L3p K02906 RP-L3; large subunit ribosomal protein L3 D Msm_0748 ribosomal protein L5p K02931 RP-L5; large subunit ribosomal protein L5 D Msm_0745 ribosomal protein L6p, RplF K02933 RP-L6; large subunit ribosomal protein L6 D Msm_0621 ribosomal protein L10p K02864 RP-L10; large subunit ribosomal protein L10 D Msm_0623 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Msm_1430 ribosomal protein L13p K02871 RP-L13; large subunit ribosomal protein L13 D Msm_0751 ribosomal protein L14p K02874 RP-L14; large subunit ribosomal protein L14 D Msm_0739 ribosomal protein L15p K02876 RP-L15; large subunit ribosomal protein L15 D Msm_0742 ribosomal protein L18p, RplR K02881 RP-L18; large subunit ribosomal protein L18 D Msm_0757 ribosomal protein L22p K02890 RP-L22; large subunit ribosomal protein L22 D Msm_0760 ribosomal protein L23p K02892 RP-L23; large subunit ribosomal protein L23 D Msm_0750 ribosomal protein L24p K02895 RP-L24; large subunit ribosomal protein L24 D Msm_0755 ribosomal protein L29p K02904 RP-L29; large subunit ribosomal protein L29 D Msm_0740 ribosomal protein L30p K02907 RP-L30; large subunit ribosomal protein L30 D Msm_0620 ribosomal protein L12p K02869 RP-L12; large subunit ribosomal protein L12 D Msm_0703 ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D Msm_1798 5S ribosomal RNA -1 K01985 5SrRNA; 5S ribosomal RNA D Msm_1803 5S ribosomal RNA -2B K01985 5SrRNA; 5S ribosomal RNA D Msm_1804 5S ribosomal RNA -2A K01985 5SrRNA; 5S ribosomal RNA D Msm_1801 16S ribosomal RNA -1 K01977 16SrRNA; 16S ribosomal RNA D Msm_1806 16S ribosomal RNA -2 K01977 16SrRNA; 16S ribosomal RNA D Msm_1799 23S ribosomal RNA -1 K01980 23SrRNA; 23S ribosomal RNA D Msm_1805 23S ribosomal RNA -2 K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:msi03009] D Msm_1046 pre-mRNA splicing ribonucleoprotein PRP31 K14564 NOP56; nucleolar protein 56 D Msm_0732 tRNA pseudouridine synthase B, TruB K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D Msm_1132 ribosome biogenesis protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D Msm_1632 predicted brix-domain ribosomal biogenesis protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D Msm_0176 ribonuclease III (dsRNA-specific), Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3] D Msm_0954 predicted RNA-binding protein K06961 KRR1; ribosomal RNA assembly protein D Msm_0952 serine/threonine protein kinase, RIO1 family K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Msm_0713 predicted nucleotide kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D Msm_0126 conserved hypothetical protein Msm_0126 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D Msm_0607 predicted ATPase, RNase L inhibitor family K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D Msm_0869 GTPase, GTP1/OBG family K06943 NOG1; nucleolar GTP-binding protein D Msm_0753 ribonuclease P, subunit P29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Msm_0246 ribonuclease P, subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Msm_0247 ribonuclease P, subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Msm_0704 translation initiation factor 6 (aIF-6) K03264 EIF6; translation initiation factor 6 D Msm_0512 NMD3-related protein (nonsense mediated mRNA decay) K07562 NMD3; 60S ribosomal export protein NMD3 D Msm_0244 predicted exosome subunit K14574 SDO1; ribosome maturation protein SDO1 D Msm_0642 cell division control protein Cdc48, AAA+ ATPase family K13525 VCP; transitional endoplasmic reticulum ATPase D Msm_1047 fibrillarin-like pre-rRNA processing protein, FlpA K04795 flpA; fibrillarin-like pre-rRNA processing protein D Msm_0206 ribosomal protein L7ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Msm_0425 predicted RNA-binding protein involved in rRNA processing K07569 gar1; RNA-binding protein D Msm_0906 transcription termination factor, NusA K02600 nusA; transcription termination/antitermination protein NusA D Msm_1374 dimethyladenosine transferase, KsgA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Msm_0508 cell division protein J (23S rRNA methylase), FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Msm_0893 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Msm_1498 helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Msm_0612 putative translation factor, Sua5/YciO/YrdC/YwlC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Msm_0710 RNA-binding protein, CRS1/YhbY family K07574 yhbY; RNA-binding protein D Msm_1164 predicted GTPase, HSR1-related family K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:msi03016] D Msm_0753 ribonuclease P, subunit P29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Msm_0246 ribonuclease P, subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Msm_0247 ribonuclease P, subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Msm_0711 ribonuclease P, subunit RPR2 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D Msm_0492 ribonuclease Z (zinc-dependent), beta-lactamase superfamily, ElaC K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Msm_0666 conserved hypothetical protein Msm_0666 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Msm_0668 conserved hypothetical protein Msm_0668 K24956 ZBTB8OS; protein archease D Msm_0898 translation elongation factor 1-alpha (EF-Tu) K03231 EEF1A; elongation factor 1-alpha D Msm_1452 glutamyl-tRNA synthetase, GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Msm_0287 prolyl-tRNA synthetase, ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Msm_1341 isoleucyl-tRNA synthetase, IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Msm_1172 leucyl-tRNA synthetase, LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Msm_0071 methionyl-tRNA synthetase, MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Msm_1231 arginyl-tRNA synthetase, ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Msm_0619 alanyl-tRNA synthetase, AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Msm_0403 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Msm_1214 threonyl-tRNA synthetase, ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Msm_1710 seryl-tRNA synthetase, SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Msm_0268 cysteinyl-tRNA synthetase, CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Msm_0275 valyl-tRNA synthetase, ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Msm_1181 histidyl-tRNA synthetase, HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Msm_1478 phenylalanyl-tRNA synthetase, PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Msm_0277 phenylalanyl-tRNA synthetase, beta subunit, PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Msm_0513 tyrosyl-tRNA synthetase, TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Msm_0216 tryptophanyl-tRNA synthetase, TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Msm_0845 2-methylthioadenine synthetase, MiaB K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D Msm_1031 N2,N2-dimethylguanosine tRNA methyltransferase, Trm1 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D Msm_0802 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Msm_1173 tRNA(1-methyladenosine) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Msm_0132 conserved hypothetical protein Msm_0132 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Msm_0922 Fe-S oxidoreductase K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D Msm_1036 predicted methyltransferase K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114] D Msm_0855 tRNA pseudouridine synthase A, TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Msm_1156 tRNA pseudouridine synthase D, TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Msm_1361 predicted pseudouridylate synthase K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D Msm_0264 cysteine desulfurase, NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Msm_0842 histone acetyltransferase, radical SAM superfamily K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D Msm_0612 putative translation factor, Sua5/YciO/YrdC/YwlC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Msm_0463 predicted tRNA(His) guanylyltransferase K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79] D Msm_0053 tRNA nucleotidyltransferase (CCA-adding enzyme) K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D Msm_0217 tRNA intron endonuclease, EndA K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D Msm_0054 2'-5' RNA ligase, LigT K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Msm_1387 lysyl-tRNA synthetase (class I), LysS K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Msm_1236 aspartyl-tRNA synthetase, AspS K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Msm_0490 SAM-dependent methyltransferase, UbiE/CobQ family K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Msm_0352 predicted DNA modification methylase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D Msm_0932 conserved hypothetical protein Msm_0932 K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D Msm_1198 O-sialoglycoprotein endopeptidase K15904 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32 [EC:2.3.1.234 2.7.11.1] D Msm_0348 conserved hypothetical protein Msm_0348 K09119 cgi121; KEOPS complex subunit Cgi121 D Msm_1633 conserved hypothetical protein Msm_1633 K09741 pcc1; KEOPS complex subunit Pcc1 D Msm_0936 transcription regulator-related ATPase, ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Msm_1056 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Msm_1055 coenzyme PQQ synthesis protein, SAM family K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Msm_1557 queuine/archaeosine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D Msm_0617 thiamine biosynthesis ATP pyrophosphatase, ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Msm_0452 predicted DNA-binding protein (regulator) K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] C 03012 Translation factors [BR:msi03012] D Msm_0951 translation initiation factor aIF-1A K03236 EIF1A; translation initiation factor 1A D Msm_0754 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1 D Msm_1133 translation initiation factor aIF-2, alpha subunit K03237 EIF2S1; translation initiation factor 2 subunit 1 D Msm_0511 translation initiation factor 2, beta subunit (aIF-2beta) K03238 EIF2S2; translation initiation factor 2 subunit 2 D Msm_0200 translation initiation factor aIF-2, gamma subunit K03242 EIF2S3; translation initiation factor 2 subunit 3 D Msm_0877 translation initiation factor 5A (aIF-5A) K03263 EIF5A; translation initiation factor 5A D Msm_0202 translation initiation factor aIF-2, InfB K03243 EIF5B; translation initiation factor 5B D Msm_0704 translation initiation factor 6 (aIF-6) K03264 EIF6; translation initiation factor 6 D Msm_0898 translation elongation factor 1-alpha (EF-Tu) K03231 EEF1A; elongation factor 1-alpha D Msm_0602 translation elongation factor EF-1, beta subunit K03232 EEF1B; elongation factor 1-beta D Msm_0899 translation elongation factor EF-2, FusA K03234 EEF2; elongation factor 2 D Msm_1358 diphthamide synthase, subunit DPH2 K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D Msm_0142 predicted ATPase (PP-loop superfamily) K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D Msm_0891 peptide chain release factor eRF, subunit 1 K03265 ETF1; peptide chain release factor subunit 1 D Msm_1373 methyltransferase, HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Msm_0605 peptidyl-tRNA hydrolase, PTH2 family K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:msi03110] D Msm_1109 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Msm_0826 chaperonin, Cpn60/TCP-1/thermosome family, GroL K22447 cct; archaeal chaperonin D Msm_0220 chaperonin (TCP-1/cpn60 family), alpha subunit K22447 cct; archaeal chaperonin D Msm_1110 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Msm_1108 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D Msm_0870 molecular chaperone (small heat shock protein), HSP20/alpha crystallin family K13993 HSP20; HSP20 family protein D Msm_0702 predicted prefoldin, alpha subunit K04797 pfdA; prefoldin alpha subunit D Msm_1634 prefoldin, beta subunit K04798 pfdB; prefoldin beta subunit D Msm_0108 hydrogenase nickel incorporation protein, HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Msm_0107 hydrogenase expression/formation protein, HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Msm_1367 peptidyl-prolyl cis-trans isomerase, PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Msm_0930 peptidyl-prolyl cis-trans isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Msm_0550 protein disulfide-isomerase, thioredoxin-related K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:msi04131] D Msm_0203 nucleoside diphosphate kinase, Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Msm_0642 cell division control protein Cdc48, AAA+ ATPase family K13525 VCP; transitional endoplasmic reticulum ATPase D Msm_1170 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Msm_0625 protein translocation complex sec61, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Msm_0898 translation elongation factor 1-alpha (EF-Tu) K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:msi04121] D Msm_0125 ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Msm_0193 ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae C 03051 Proteasome [BR:msi03051] D Msm_0245 proteasome, alpha subunit, PsmA K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Msm_1037 proteasome, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Msm_0354 ATP-dependent 26S proteasome regulatory subunit, RPT1 K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:msi03032] D Msm_1332 ssDNA-binding protein K07466 RFA1; replication factor A1 D Msm_1137 DNA polymerase sliding clamp subunit, PCNA family, Pcn K04802 PCNA; proliferating cell nuclear antigen D Msm_0725 DNA repair flap structure-specific 5'-3' endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Msm_0645 ATP-dependent DNA ligase, Cdc9 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Msm_0531 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Msm_1132 ribosome biogenesis protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D Msm_0732 tRNA pseudouridine synthase B, TruB K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D Msm_0427 DNA primase (type), DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D Msm_1264 cell division control protein 6, Cdc6 K10725 cdc6A; archaeal cell division control protein 6 D Msm_0671 cell division control protein Cdc6-related, AAA+ ATPase superfamily K10725 cdc6A; archaeal cell division control protein 6 D Msm_0510 predicted ATPase involved in DNA replication control, MCM2/3/5 family K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Msm_0075 DNA primase, small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D Msm_0073 DNA primase, large subunit (eukaryotic-type) K18882 priL; DNA primase large subunit D Msm_1136 conserved hypothetical protein Msm_1136 K09723 ginS; DNA replication factor GINS D Msm_0979 ribonuclease HII, RnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Msm_1041 DNA-dependent DNA polymerase I, PolB1 K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Msm_1481 DNA-directed DNA polymerase, family B, PolB K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Msm_1384 DNA polymerase II, large subunit, PolC K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D Msm_1271 DNA polymerase II, small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D Msm_1177 replication factor C, large subunit, RfcL K04800 rfcL; replication factor C large subunit D Msm_1176 replication factor C, small subunit, RfcS K04801 rfcS; replication factor C small subunit D Msm_0956 type II DNA topoisomerase VI, subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D Msm_0955 type II DNA topoisomerase VI, subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D Msm_0717 DNA topoisomerase I, TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:msi03036] D Msm_0531 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Msm_0176 ribonuclease III (dsRNA-specific), Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3] D Msm_0763 conserved hypothetical protein Msm_0763 K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D Msm_0213 histone, HMtA K24450 hmf; DNA-binding protein D Msm_0844 histone, HmtA K24450 hmf; DNA-binding protein D Msm_1260 histone K24450 hmf; DNA-binding protein D Msm_0626 cell division protein, FtsZ K03531 ftsZ; cell division protein FtsZ D Msm_0980 rod shape-determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Msm_1241 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D Msm_0428 integrase-recombinase protein, phage integrase family K04763 xerD; integrase/recombinase XerD D Msm_0002 integrase-recombinase protein K04763 xerD; integrase/recombinase XerD D Msm_0045 nucleotide-binding protein (putative ATPase involved in chromosome partitioning) K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:msi03400] D Msm_1185 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Msm_1365 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Msm_0272 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Msm_1137 DNA polymerase sliding clamp subunit, PCNA family, Pcn K04802 PCNA; proliferating cell nuclear antigen D Msm_0725 DNA repair flap structure-specific 5'-3' endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Msm_0645 ATP-dependent DNA ligase, Cdc9 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Msm_1332 ssDNA-binding protein K07466 RFA1; replication factor A1 D Msm_1369 MutT-related protein, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Msm_0691 mutator mutT protein (NUDIX domain) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Msm_1355 ADP-ribose pyrophosphatase, NUDIX hydrolase family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Msm_0687 deoxycytidine-triphosphate deaminase, Dcd K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Msm_1479 exodeoxyribonuclease, XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Msm_0963 endonuclease IV, xylose isomerase-like TIM barrel family, Nfo K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Msm_1193 single-stranded DNA-specific exonuclease, DHH family K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Msm_1500 ssDNA exonuclease, RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Msm_1581 excinuclease ABC, subunit A, UvrA K03701 uvrA; excinuclease ABC subunit A D Msm_1579 excinuclease ABC, subunit B, UvrB K03702 uvrB; excinuclease ABC subunit B D Msm_1695 excinuclease ABC, subunit C, UvrC K03703 uvrC; excinuclease ABC subunit C D Msm_0058 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Msm_0113 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Msm_0524 DNA mismatch repair ATPase, MutS K07456 mutS2; DNA mismatch repair protein MutS2 D Msm_0001 exoribonuclease VII, large subunit, XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Msm_0120 purine NTPase involved in DNA repair, Rad50 K03546 sbcC; DNA repair protein SbcC/Rad50 D Msm_0121 DNA repair exonuclease (SbcD/Mre11-family), Rad32 K03547 sbcD; DNA repair protein SbcD/Mre11 D Msm_1315 predicted transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Msm_0540 predicted transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Msm_0023 uncharacterized protein predicted to be involved in DNA repair K15342 cas1; CRISP-associated protein Cas1 D Msm_0164 conserved hypothetical protein predicted to be involved in DNA repair Msm_0164 K15342 cas1; CRISP-associated protein Cas1 D Msm_1333 DNA repair protein RadA, RadA K04483 radA; DNA repair protein RadA D Msm_0611 DNA repair protein, RadB K04484 radB; DNA repair protein RadB D Msm_1098 holliday junction resolvase K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D Msm_0122 predicted ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D Msm_0123 uncharacterized protein conserved in archaea K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-] D Msm_0839 ATP-dependent helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D Msm_0717 DNA topoisomerase I, TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Msm_1771 DNA helicase, UvrD/REP helicase family K03658 helD; DNA helicase IV [EC:5.6.2.4] D Msm_1420 helicase, UvrD/REP family K03658 helD; DNA helicase IV [EC:5.6.2.4] D Msm_0502 ATP-dependent helicase, Lhr-like protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Msm_0346 conserved hypothetical protein Msm_0346 K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:msi03029] D Msm_0753 ribonuclease P, subunit P29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Msm_0246 ribonuclease P, subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Msm_0247 ribonuclease P, subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Msm_0513 tyrosyl-tRNA synthetase, TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Msm_1172 leucyl-tRNA synthetase, LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Msm_0403 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Msm_1231 arginyl-tRNA synthetase, ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Msm_1253 glutamyl-tRNA (Gln) amidotransferase subunit A, GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Msm_1101 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase, B subunit, GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Msm_0156 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Msm_1109 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Msm_1108 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D Msm_1110 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Msm_0264 cysteine desulfurase, NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Msm_0045 nucleotide-binding protein (putative ATPase involved in chromosome partitioning) K03593 mrp; ATP-binding protein involved in chromosome partitioning B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:msi02000] D Msm_0774 multidrug ABC transporter, ATPase component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D Msm_0773 multidrug ABC transporter, ATPase component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D Msm_1609 molybdate ABC transporter, substrate-binding component, ModA K02020 modA; molybdate transport system substrate-binding protein D Msm_1610 molybdate ABC transporter, permease component, ModC K02018 modB; molybdate transport system permease protein D Msm_1611 molybdate ABC transporter, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Msm_1469 nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component, TauA K15553 ssuA; sulfonate transport system substrate-binding protein D Msm_0291 nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC K15554 ssuC; sulfonate transport system permease protein D Msm_0290 nitrate/sulfonate/bicarbonate ABC transporter, ATPase component, TauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Msm_0991 nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component K05845 opuC; osmoprotectant transport system substrate-binding protein D Msm_0990 nitrate/sulfonate/bicarbonate ABC transporter, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Msm_0568 phosphate ABC transporter, phosphate-binding component, PstS K02040 pstS; phosphate transport system substrate-binding protein D Msm_0567 phosphate ABC transporter, permease component, PstC K02037 pstC; phosphate transport system permease protein D Msm_0566 phosphate ABC transporter, permease component, PstA K02038 pstA; phosphate transport system permease protein D Msm_0565 phosphate ABC transporter, ATPase component, PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Msm_0807 polar amino acid ABC transporter, substrate-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Msm_0806 polar amino acid ABC transporter, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D Msm_0805 polar amino acid ABC transporter, ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Msm_0300 peptide/nickel ABC transporter, solute-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Msm_0301 peptide/nickel ABC transporter, permease component, DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D Msm_0302 peptide/nickel ABC transporter, permease component, DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Msm_0303 peptide/nickel ABC transporter, ATP-binding component, DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D Msm_0304 peptide/nickel ABC transporter, ATP-binding component, DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D Msm_1393 iron(III) ABC transporter, substrate-binding component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Msm_1394 iron(III) ABC transporter, permease component K02015 ABC.FEV.P; iron complex transport system permease protein D Msm_1395 iron(III) ABC transporter, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Msm_1619 cobalt ABC transporter, substrate-binding component, CbiN K02009 cbiN; cobalt/nickel transport protein D Msm_0584 cobalt ABC transporter, permease component K02009 cbiN; cobalt/nickel transport protein D Msm_1620 cobalt ABC transporter, permease component, CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Msm_0585 cobalt ABC transporter, permease component, CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Msm_0583 cobalt ABC transporter, permease component, CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Msm_1618 cobalamin biosynthesis protein M, CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Msm_1488 cobalt ABC transporter, permease component, CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Msm_1621 cobalt ABC transporter, ATPase component, CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Msm_0586 cobalt ABC transporter, ATPase component, CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Msm_0429 biotin biosynthesis protein, BioY K03523 bioY; biotin transport system substrate-specific component D Msm_0772 predicted permease, major facilitator superfamily K16926 htsT; energy-coupling factor transport system substrate-specific component D Msm_0771 cobalt ABC transporter, permease component, CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D Msm_0770 cobalt ABC transporter, ATPase component, CbiO K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Msm_1325 predicted polysaccharide/polyol phosphate ABC transporter, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Msm_1593 polysaccharide/polyol phosphate ABC transporter, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Msm_1326 polysaccharide/polyol phosphate ABC transporter, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Msm_1592 polysaccharide/polyol phosphate ABC transporter, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Msm_0594 multidrug ABC transporter, permease component K19310 bcrB; bacitracin transport system permease protein D Msm_0595 multidrug ABC transporter, permease component K19310 bcrB; bacitracin transport system permease protein D Msm_0593 multidrug ABC transporter, ATPase component, CcmA K19309 bcrA; bacitracin transport system ATP-binding protein D Msm_1248 multidrug ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Msm_1484 multidrug ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Msm_1249 multidrug ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Msm_1483 multidrug ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Msm_0856 antimicrobial peptide ABC transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Msm_0857 antimicrobial peptide ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Msm_1003 ABC transporter involved in Fe-S cluster assembly, ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein D Msm_0152 Na+-driven multidrug efflux pump (MATE family), NorM K26937 dinF; MATE family, multidrug efflux pump D Msm_1228 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D Msm_0414 Na+-driven multidrug efflux pump, NorM K26937 dinF; MATE family, multidrug efflux pump D Msm_0252 Na+-driven multidrug efflux pump, NorM K26937 dinF; MATE family, multidrug efflux pump D Msm_1229 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D Msm_1085 aquaporin, MIP superfamily, AqpM K02440 glpF; glycerol uptake facilitator D Msm_0234 ammonium transporter K03320 amt; ammonium transporter, Amt family D Msm_1403 formate/nitrite transporter, FdhC K21993 fdhC; formate transporter D Msm_1275 mgtE-like divalent cation transporter K07244 K07244; mgtE-like transporter D Msm_0978 biopolymer transport protein, MotA/TolQ/ExbB proton channel family K03561 exbB; biopolymer transport protein ExbB D Msm_0977 putative biopolymer transport protein, ExbD/TolR family K03559 exbD; biopolymer transport protein ExbD D Msm_0468 conserved hypothetical membrane protein Msm_0468 K24915 TMEM175; TMEM175 potassium channel family protein D Msm_0469 conserved hypothetical membrane protein Msm_0469 K24915 TMEM175; TMEM175 potassium channel family protein D Msm_1205 conserved hypothetical membrane protein Msm_1205 K24915 TMEM175; TMEM175 potassium channel family protein D Msm_1026 hemolysin-related protein, transporter-associated family, TlyC K03699 tlyC; magnesium and cobalt exporter, CNNM family D Msm_0052 adhesin-like protein K21449 ata; trimeric autotransporter adhesin D Msm_1305 adhesin-like protein K21449 ata; trimeric autotransporter adhesin D Msm_0173 adhesin-like protein K21449 ata; trimeric autotransporter adhesin D Msm_1567 adhesin-like protein K21449 ata; trimeric autotransporter adhesin D Msm_0616 adhesin-like protein K21449 ata; trimeric autotransporter adhesin D Msm_1639 heavy metal cation (Co/Zn/Cd) efflux system protein, CzcD family K16264 czcD; cobalt-zinc-cadmium efflux system protein D Msm_1027 Ca2+/Na+ antiporter (K+-dependent) K07301 yrbG; cation:H+ antiporter D Msm_0618 pH regulator (monovalent cation:H+ antiporter) K11105 cvrA; potassium/hydrogen antiporter D Msm_1095 Trk-type potassium transport system, membrane component, TrkH K03498 trkH; trk/ktr system potassium uptake protein D Msm_1096 Trk-type potassium transport system, NAD-binding component, TrkA K03499 trkA; trk/ktr system potassium uptake protein D Msm_0397 xanthine/uracil permease, UraA K02824 uraA; uracil permease D Msm_1736 permease, xanthine/uracil/vitamin C permease family K06901 pbuG; adenine/guanine/hypoxanthine permease D Msm_1721 voltage gated chloride channel protein/cation transporter, TrkA family K03281 clcA; chloride channel protein, CIC family D Msm_1170 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Msm_1078 predicted bile acid/sodium symporter K03325 ACR3; arsenite transporter D Msm_1208 teichoic acid transporter K06409 spoVB; stage V sporulation protein B D Msm_1334 predicted permease K24180 mleP; malate permease and related proteins D Msm_0646 conserved hypothetical protein Msm_0646 K09125 yhhQ; queuosine precursor transporter D Msm_1382 conserved hypothetical membrane protein Msm_1382 K09125 yhhQ; queuosine precursor transporter D Msm_0549 cytochrome C-type biogenesis protein, DsbD K06196 ccdA; cytochrome c-type biogenesis protein D Msm_0588 ferrous iron transport protein A, FeoA K04758 feoA; ferrous iron transport protein A D Msm_0589 ferrous iron transport protein B, FeoB K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:msi02044] D Msm_0597 type II/IV secretion system protein kinase, GspE K07332 flaI; archaeal flagellar protein FlaI D Msm_0596 type II secretion system protein, GspF K07333 flaJ; archaeal flagellar protein FlaJ D Msm_0471 type II secretion system protein F, GspF K07333 flaJ; archaeal flagellar protein FlaJ D Msm_0146 type IV leader peptidase K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D Msm_0089 pyrroline-5-carboxylate reductase (NADP oxidoreductase, coenzyme F420-dependent), ProC K02239 comER; competence protein ComER D Msm_0738 preprotein translocase, SecY subunit, SecY K03076 secY; preprotein translocase subunit SecY D Msm_1360 signal recognition particle GTPase SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Msm_0701 signal recognition particle GTPase SRP54 K03110 ftsY; fused signal recognition particle receptor D Msm_0625 protein translocation complex sec61, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Msm_1501 signal recognition particle, subunit SRP19 K03105 SRP19; signal recognition particle subunit SRP19 C 02042 Bacterial toxins [BR:msi02042] D Msm_1026 hemolysin-related protein, transporter-associated family, TlyC K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system C 02035 Bacterial motility proteins [BR:msi02035] D Msm_0597 type II/IV secretion system protein kinase, GspE K07332 flaI; archaeal flagellar protein FlaI D Msm_0596 type II secretion system protein, GspF K07333 flaJ; archaeal flagellar protein FlaJ D Msm_0471 type II secretion system protein F, GspF K07333 flaJ; archaeal flagellar protein FlaJ D Msm_0146 type IV leader peptidase K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:msi04812] D Msm_1438 predicted dioxygenase K06990 MEMO1; MEMO1 family protein D Msm_0980 rod shape-determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Msm_0626 cell division protein, FtsZ K03531 ftsZ; cell division protein FtsZ D Msm_1241 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:msi04147] D Msm_1435 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Msm_0918 3-phosphoglycerate kinase, Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Msm_0898 translation elongation factor 1-alpha (EF-Tu) K03231 EEF1A; elongation factor 1-alpha D Msm_0899 translation elongation factor EF-2, FusA K03234 EEF2; elongation factor 2 D Msm_1109 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Msm_0725 DNA repair flap structure-specific 5'-3' endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Msm_1629 IMP dehydrogenase/GMP reductase, GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Msm_0193 ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Msm_0642 cell division control protein Cdc48, AAA+ ATPase family K13525 VCP; transitional endoplasmic reticulum ATPase D Msm_0374 long-chain fatty-acid-CoA ligase (AMP-forming), CaiC K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Msm_1562 acetyl-CoA acyltransferase, SCP-type thiolase family K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Msm_0737 adenylate kinase, AdkA K00939 adk; adenylate kinase [EC:2.7.4.3] D Msm_1359 adenine phosphoribosyltransferase, Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Msm_0192 argininosuccinate lyase, ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Msm_1084 argininosuccinate synthase, ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Msm_1418 glutamine synthetase, GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Msm_1476 porphobilinogen synthase, HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Msm_0457 D-3-phosphoglycerate dehydrogenase, SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Msm_0637 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Msm_0919 triosephosphate isomerase, TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:msi02048] D Msm_0023 uncharacterized protein predicted to be involved in DNA repair K15342 cas1; CRISP-associated protein Cas1 D Msm_0164 conserved hypothetical protein predicted to be involved in DNA repair Msm_0164 K15342 cas1; CRISP-associated protein Cas1 D Msm_0163 conserved hypothetical proetin predicted to be involved in DNA repair Msm_0163 K09951 cas2; CRISPR-associated protein Cas2 D Msm_0166 predicted helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Msm_0169 predicted CRISPR-associated protein K19088 cst1; CRISPR-associated protein Cst1 D Msm_0168 conserved hypothetical protein predicted to be involved in DNA repair Msm_0168 K19075 cst2; CRISPR-associated protein Cst2 D Msm_0165 predicted exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Msm_1059 predicted RecB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Msm_0167 conserved hypothetical protein predicted to be involved in DNA repair Msm_0167 K19090 cas5t; CRISPR-associated protein Cas5t D Msm_0170 conserved hypothetical protein predicted to be involved in DNA repair Msm_0170 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Msm_0158 type I restriction-modification system methylase, subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Msm_0531 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Msm_0626 cell division protein, FtsZ K03531 ftsZ; cell division protein FtsZ D Msm_0980 rod shape-determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Msm_1452 glutamyl-tRNA synthetase, GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Msm_0816 predicted nucleic acid-binding protein, PIN domain-like family K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] D Msm_0264 cysteine desulfurase, NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Msm_0693 ATPase involved in DNA repair, SbcC K19171 dndD; DNA sulfur modification protein DndD C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:msi04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:msi04052] D Msm_1792 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules [BR:msi04090] C 01504 Antimicrobial resistance genes [BR:msi01504] D Msm_0047 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:msi03100] D Msm_1796 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Msm_1800 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Msm_1828 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Msm_1829 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Msm_1830 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Msm_1832 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Msm_1826 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Msm_1818 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Msm_1797 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Msm_1802 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Msm_1824 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Msm_1835 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Msm_1834 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Msm_1822 tRNA-His K14226 tRNA-His; tRNA His D Msm_1809 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Msm_1823 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Msm_1808 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Msm_1836 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Msm_1817 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Msm_1825 tRNA-Met K14230 tRNA-Met; tRNA Met D Msm_1827 tRNA-Met K14230 tRNA-Met; tRNA Met D Msm_1813 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Msm_1820 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Msm_1811 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1837 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1833 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1815 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1816 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Msm_1810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Msm_1807 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Msm_1821 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Msm_1819 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Msm_1831 tRNA-Val K14237 tRNA-Val; tRNA Val D Msm_1814 tRNA-Val K14237 tRNA-Val; tRNA Val D Msm_1801 16S ribosomal RNA -1 K01977 16SrRNA; 16S ribosomal RNA D Msm_1806 16S ribosomal RNA -2 K01977 16SrRNA; 16S ribosomal RNA D Msm_1799 23S ribosomal RNA -1 K01980 23SrRNA; 23S ribosomal RNA D Msm_1805 23S ribosomal RNA -2 K01980 23SrRNA; 23S ribosomal RNA D Msm_1798 5S ribosomal RNA -1 K01985 5SrRNA; 5S ribosomal RNA D Msm_1803 5S ribosomal RNA -2B K01985 5SrRNA; 5S ribosomal RNA D Msm_1804 5S ribosomal RNA -2A K01985 5SrRNA; 5S ribosomal RNA D Msm_1812 7S ribosomal RNA K01983 ffs; SRP RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Msm_0882 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase K18855 E1.1.1.374; UDP-N-acetylglucosamine 3-dehydrogenase [EC:1.1.1.374] D Msm_0392 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Msm_0391 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Msm_0049 F420-dependent NADP oxidoreductase, fno K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D Msm_1349 F420H2-oxidase/flavoprotein, FprA K19817 fprA; coenzyme F420H2 oxidase [EC:1.5.3.22] D Msm_0222 flavoprotein (Metallo-beta-lactamase superfamily), FpaA K19817 fprA; coenzyme F420H2 oxidase [EC:1.5.3.22] D Msm_0046 NADH oxidase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3] D Msm_0582 peptide methionine sulfoxide reductase, PMSR K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Msm_0043 peptide methionine sulfoxide reductase; stress) K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Msm_0262 desulfoferrodoxin (dfx) K05919 dfx; superoxide reductase [EC:1.15.1.2] D Msm_1712 predicted ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D Msm_0849 molybdenum cofactor biosynthesis-related protein, MoaA K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D Msm_0652 pyruvate formate-lyase activating enzyme, PflA K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Msm_1284 pyruvate formate-lyase activating enzyme, PflA K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Msm_0539 putative DNA-directed DNA polymerase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Msm_0801 diphthine synthase, DphB K20215 dph5; diphthine synthase [EC:2.1.1.98] D Msm_1020 Fe-S oxidoreductase, Radical SAM family K25222 mmp10; [methyl coenzyme M reductase]-L-arginine C-5-methyltransferase [EC:2.1.1.379] D Msm_0824 putative N-acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D Msm_0836 glycosyltransferase, GT1 family K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Msm_1615 deoxyhypusine synthase, Dys K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D Msm_1105 NCAIR mutase related protein, PurE K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Msm_0633 archaeosine tRNA-ribosyltransferase K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-] D Msm_0544 predicted Fe-S oxidoreductase K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-] D Msm_0078 dolichol kinase (cytidylyltransferase family) K18678 VTE5; phytol kinase [EC:2.7.1.182] D Msm_0791 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16] D Msm_0613 phosphatidylglycerophosphate synthase, PgsA K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D Msm_0149 predicted acetylesterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D Msm_0133 predicted thioesterase, FcbC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Msm_0551 conserved hypothetical protein Msm_0551 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D Msm_0097 Mg-dependent DNase, TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Msm_0416 Mg-dependent DNase, TatD-related K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Msm_1495 nuclease, Staphylococcus nuclease-like family K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D Msm_0497 predicted nuclease, RecB family K07503 nucS; endonuclease [EC:3.1.-.-] D Msm_0872 glucosamine:fructose-6-phosphate aminotransferase (isomerizing), AgaS K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-] D Msm_1091 sugar kinase, YjeF-related protein family K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Msm_0482 ATP-utilizing enzyme, PP-loop superfamily K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Msm_0935 conserved hypothetical protein Msm_0935 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Msm_0480 YcaO-like protein K24409 ycaO; thioglycine synthase [EC:6.2.2.1] D Msm_0091 2,3-diphosphoglycerate synthase (putative GTPase) K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9] D Msm_0895 cation transport ATPase, HAD family K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Msm_1127 cation transport ATPase, HAD family K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Msm_1090 sugar fermentation stimulation protein, SfsA K06206 sfsA; sugar fermentation stimulation protein A D Msm_1626 predicted fumarate reductase K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D Msm_1348 rubrerythrin K19824 fprB; rubrerythrin D Msm_1392 formate dehydrogenase accessory protein FdhD, FdhD K02379 fdhD; FdhD protein D Msm_0295 formate dehydrogenase accessory protein, FdhD K02379 fdhD; FdhD protein D Msm_0579 polyferredoxin, iron-sulfur binding K05524 fdxA; ferredoxin D Msm_0263 nitrogen fixation protein, NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Msm_0808 nitrogenase iron-molybdenum cofactor biosynthesis protein, NifB K02585 nifB; nitrogen fixation protein NifB D Msm_0326 conserved hypothetical membrane protein Msm_0326 K14092 ehaA; energy-converting hydrogenase A subunit A D Msm_0325 conserved hypothetical membrane protein Msm_0325 K14093 ehaB; energy-converting hydrogenase A subunit B D Msm_0324 conserved hypothetical membrane protein Msm_0324 K14094 ehaC; energy-converting hydrogenase A subunit C D Msm_0323 conserved hypothetical membrane protein Msm_0323 K14095 ehaD; energy-converting hydrogenase A subunit D D Msm_0322 predicted [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaE K14096 ehaE; energy-converting hydrogenase A subunit E D Msm_0321 conserved hypothetical membrane protein Msm_0321 K14097 ehaF; energy-converting hydrogenase A subunit F D Msm_0320 predicted [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaG K14098 ehaG; energy-converting hydrogenase A subunit G D Msm_0319 NADH dehydrogenase I, subunit N related K14099 ehaH; energy-converting hydrogenase A subunit H D Msm_0318 conserved hypothetical membrane protein Msm_0318 K14100 ehaI; energy-converting hydrogenase A subunit I D Msm_0317 NADH dehydrogenase (ubiquinone), subunit 1 K14101 ehaJ; energy-converting hydrogenase A subunit J D Msm_0316 hypothetical protein Msm_0316 K14102 ehaK; energy-converting hydrogenase A subunit K D Msm_0315 predicted [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaL K14103 ehaL; energy-converting hydrogenase A subunit L D Msm_0314 conserved hypothetical protein Msm_0314 K14104 ehaM; energy-converting hydrogenase A subunit M D Msm_0313 [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase (complex I), subunit PSST/NdhK/NuoB K14105 ehaN; energy-converting hydrogenase A subunit N D Msm_0312 [NiFe]-hydrogenase-3-type complex, large subunit/NADH:quinone oxidoreductase (complex I), subunit 49K/NdhH/NuoD K14106 ehaO; energy-converting hydrogenase A subunit O D Msm_0311 polyferredoxin, iron-sulfur binding K14107 ehaP; energy-converting hydrogenase A subunit P D Msm_0310 polyferredoxin, iron-sulfur binding K14108 ehaQ; energy-converting hydrogenase A subunit Q D Msm_0309 conserved hypothetical membrane protein Msm_0309 K14109 ehaR; energy-converting hydrogenase A subunit R D Msm_1076 energy-converting hydrogenase B, subunit A, EhbA K14110 ehbA; energy-converting hydrogenase B subunit A D Msm_1075 energy-converting hydrogenase B, subunit B, EhbB K14111 ehbB; energy-converting hydrogenase B subunit B D Msm_1074 energy-converting hydrogenase B, subunit C, EhbC K14112 ehbC; energy-converting hydrogenase B subunit C D Msm_1073 energy-converting hydrogenase B, subunit D, EhbD K14113 ehbD; energy-converting hydrogenase B subunit D D Msm_1072 energy-converting hydrogenase B, subunit E, EhbE K14114 ehbE; energy-converting hydrogenase B subunit E D Msm_1071 energy-converting hydrogenase B, subunit F, EhbF K14115 ehbF; energy-converting hydrogenase B subunit F D Msm_1070 energy-converting hydrogenase B, subunit G, EhbG K14116 ehbG; energy-converting hydrogenase B subunit G D Msm_1069 energy-converting hydrogenase B, subunit H, EhbH K14117 ehbH; energy-converting hydrogenase B subunit H D Msm_1068 energy-converting hydrogenase B, subunit I, EhbI K14118 ehbI; energy-converting hydrogenase B subunit I D Msm_1067 energy-converting hydrogenase B, subunit J, EhbJ K14119 ehbJ; energy-converting hydrogenase B subunit J D Msm_1066 energy-converting hydrogenase B, subunit K, EhbK K14120 ehbK; energy-converting hydrogenase B subunit K D Msm_1065 energy-converting hydrogenase B, subunit L, EhbL K14121 ehbL; energy-converting hydrogenase B subunit L D Msm_1064 energy-converting hydrogenase B, subunit M, EhbM K14122 ehbM; energy-converting hydrogenase B subunit M D Msm_1063 energy-converting hydrogenase B, subunit N, EhbN K14123 ehbN; energy-converting hydrogenase B subunit N D Msm_1062 energy-converting hydrogenase B, subunit O, EhbO K14124 ehbO; energy-converting hydrogenase B subunit O D Msm_1061 energy-converting hydrogenase B, subunit P, EhbP K14125 ehbP; energy-converting hydrogenase B subunit P D Msm_1060 energy-converting hydrogenase B, subunit Q, EhbQ K06862 ehbQ; energy-converting hydrogenase B subunit Q C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D Msm_1094 conserved hypothetical integral membrane protein Msm_1094 K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D Msm_0525 predicted unusual protein kinase, ubiquinone biosynthesis protein-related, AarF K03688 ubiB; ubiquinone biosynthesis protein D Msm_1407 molybdopterin-guanine dinucleotide biosynthesis protein B, MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D Msm_0481 TfuA-like protein K24410 tfuA; TfuA protein B B 09192 Unclassified: genetic information processing C 99973 Transcription D Msm_0355 predicted transcription factor (eukaryotic MBF1 related) K03627 MBF1; putative transcription factor D Msm_1245 DNA-binding protein, AlbA K03622 ssh10b; archaea-specific DNA-binding protein D Msm_0182 snRNP Sm-like protein K04796 RUXX; small nuclear ribonucleoprotein D Msm_1292 transcriptional accessory protein, S1 RNA binding family, Tex K06959 tex; protein Tex D Msm_1614 predicted transcriptional regulator K07744 K07744; transcriptional regulator C 99974 Translation D Msm_1375 predicted RNA-binding protein K07572 K07572; putative nucleotide binding protein D Msm_0764 ribosomal L11 RNA methyltransferase (SAM-dependent) K07579 K07579; putative methylase D Msm_0603 predicted Zn-ribbon RNA-binding protein involved in translation K07580 K07580; Zn-ribbon RNA-binding protein D Msm_0297 predicted exosome subunit K07581 K07581; RNA-binding protein D Msm_0707 predicted subunit of tRNA methyltransferase K07585 K07585; tRNA methyltransferase C 99975 Protein processing D Msm_0636 hydrogenase expression/formation protein, HypC K04653 hypC; hydrogenase expression/formation protein HypC D Msm_0945 hydrogenase expression/formation protein, HypD K04654 hypD; hydrogenase expression/formation protein HypD D Msm_1492 hydrogenase maturation factor, HypE K04655 hypE; hydrogenase expression/formation protein HypE D Msm_1106 hydrogenase maturation factor, HypF K04656 hypF; hydrogenase maturation protein HypF D Msm_1158 hydrogenase expression/formation protein, HypE K07388 K07388; hydrogenase expression/formation protein D Msm_0966 predicted 26S protease regulatory subunit (ATP-dependent), AAA+ family ATPase K07392 PRS2; AAA family ATPase C 99976 Replication and repair D Msm_1475 predicted endonuclease III-related protein K07457 K07457; endonuclease III related protein D Msm_1756 Smf protein K04096 smf; DNA processing protein C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Msm_0386 sodium/proline symporter (proline permease), PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D Msm_1531 Na+-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Msm_1532 Na+-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Msm_0699 Na+-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family C 99978 Cell growth D Msm_1526 conserved hypothetical membrane protein Msm_1526 K06384 spoIIM; stage II sporulation protein M D Msm_0215 conserved hypothetical integral membrane protein Msm_0215 K06384 spoIIM; stage II sporulation protein M D Msm_1537 predicted acylneuraminate cytidylyltransferase, NeuS K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF C 99993 Cell motility C 99995 Signaling proteins D Msm_0708 dsDNA-binding protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins D Msm_0546 conserved hypothetical protein Msm_0546 K21908 hdeD; membrane protein HdeD C 99994 Others D Msm_0564 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Msm_0569 phosphate transport system regulator-like protein, PhoU K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D Msm_1183 ATPase, PilT family K06865 K06865; ATPase D Msm_0409 C4-type Zinc-finger protein K06874 K06874; zinc finger protein D Msm_0112 ATP-dependent RNA helicase, eIF-4A family K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Msm_1480 predicted hydrolase, HAD superfamily K07025 K07025; putative hydrolase of the HAD superfamily D Msm_1079 predicted membrane-bound metal-dependent hydrolase, NCS2 family K07038 K07038; inner membrane protein D Msm_1422 LemA protein K03744 lemA; LemA protein D Msm_0660 LemA protein K03744 lemA; LemA protein D Msm_0093 conserved hypothetical membrane-spanning protein Msm_0093 K01421 yhgE; putative membrane protein D Msm_0599 conserved hypothetical membrane protein Msm_0599 K08971 K08971; putative membrane protein D Msm_1582 conserved hypothetical membrane protein Msm_1582 K08974 K08974; putative membrane protein D Msm_0776 conserved hypothetical membrane protein Msm_0776 K08979 K08979; putative membrane protein C 99997 Function unknown D Msm_1606 arylsulfatase regulator, AslB K06871 K06871; uncharacterized protein D Msm_0236 phosphohydrolase (HD superfamily) K06885 K06885; uncharacterized protein D Msm_0431 predicted ATP-dependent carboligase, biotin carboxylase-related K06913 K06913; uncharacterized protein D Msm_0207 predicted DNA-binding protein K06933 K06933; uncharacterized protein D Msm_0632 predicted hydrolase, HD superfamily K06950 K06950; uncharacterized protein D Msm_1080 predicted deacylase K06987 K06987; uncharacterized protein D Msm_1350 predicted transcriptional regulator, ArsR family K07013 K07013; uncharacterized protein D Msm_1002 ABC transporter involved in Fe-S cluster assembly, permease component K07033 K07033; uncharacterized protein D Msm_1038 predicted metal-dependent RNase K07041 K07041; uncharacterized protein D Msm_0405 predicted metal-dependent DNase, TatD-related family K07051 K07051; uncharacterized protein D Msm_1279 predicted nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein D Msm_0728 predicted oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein D Msm_1608 predicted oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein D Msm_1450 predicted oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein D Msm_0148 predicted oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein D Msm_0420 predicted permease K07090 K07090; uncharacterized protein D Msm_0507 predicted phosphoesterase, YfcE K07095 K07095; uncharacterized protein D Msm_0792 predicted calcineurin-like phosphoesterase K07096 K07096; uncharacterized protein D Msm_1165 predicted phosphohydrolase (metal-dependent) K07098 K07098; uncharacterized protein D Msm_0964 calcineurin-like phosphoesterase K07098 K07098; uncharacterized protein D Msm_0635 predicted regulator of amino acid metabolism K07103 K07103; uncharacterized protein D Msm_0408 2-phosphoglycerate kinase/small-molecule binding protein K07105 K07105; uncharacterized protein D Msm_0269 predicted transcriptional regulator (lambda repressor-like) K07108 K07108; uncharacterized protein D Msm_0814 phosphoribosylformylglycinamidine synthase-related protein (selenophosphate synthetase) K07123 K07123; uncharacterized protein D Msm_1789 predicted ATPase, AAA+ superfamily K07133 K07133; uncharacterized protein D Msm_1790 predicted ATPase, AAA+ superfamily K07133 K07133; uncharacterized protein D Msm_1278 predicted ATPase, AAA+ superfamily K07133 K07133; uncharacterized protein D Msm_0061 predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein D Msm_1527 predicted ATPase, AAA+ superfamily K07133 K07133; uncharacterized protein D Msm_1795 predicted ATPase, AAA+ superfamily K07133 K07133; uncharacterized protein D Msm_0280 predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein D Msm_0680 predicted ATPase, AAA+ superfamily K07133 K07133; uncharacterized protein D Msm_1197 predicted ATPase, AAA+ superfamily K07133 K07133; uncharacterized protein D Msm_0190 predicted ATPase K07134 K07134; uncharacterized protein D Msm_0466 predicted tRNA-binding protein K07135 K07135; uncharacterized protein D Msm_0673 conserved hypothetical membrane protein Msm_0673 K07149 K07149; uncharacterized protein D Msm_0676 conserved hypothetical membrane protein Msm_0676 K07149 K07149; uncharacterized protein D Msm_0199 conserved hypothetical protein Msm_0199 K07158 K07158; uncharacterized protein D Msm_1131 conserved hypothetical protein Msm_1131 K07159 K07159; uncharacterized protein D Msm_0554 protein containing von Willebrand factor type A (vWA) domain, CoxE K07161 K07161; uncharacterized protein D Msm_0931 conserved hypothetical protein Msm_0931 K09003 K09003; uncharacterized protein D Msm_1339 conserved hypothetical protein Msm_1339 K09005 K09005; uncharacterized protein D Msm_0628 conserved hypothetical protein Msm_0628 K09126 K09126; uncharacterized protein D Msm_1603 conserved hypothetical protein Msm_1603 K09131 K09131; uncharacterized protein D Msm_1057 conserved hypothetical protein Msm_1057 K09139 K09139; uncharacterized protein D Msm_0867 AMMECR1-related protein K09141 K09141; uncharacterized protein D Msm_0873 conserved hypothetical protein Msm_0873 K09154 K09154; uncharacterized protein D Msm_0430 conserved hypothetical protein Msm_0430 K09706 K09706; uncharacterized protein D Msm_0894 conserved hypothetical protein Msm_0894 K09713 K09713; uncharacterized protein D Msm_1058 conserved hypothetical protein Msm_1058 K09717 K09717; uncharacterized protein D Msm_1268 conserved hypothetical protein Msm_1268 K09721 K09721; uncharacterized protein D Msm_0070 conserved hypothetical protein Msm_0070 K09724 K09724; uncharacterized protein D Msm_0106 conserved hypothetical protein Msm_0106 K09726 K09726; uncharacterized protein D Msm_0356 conserved hypothetical protein Msm_0356 K09727 K09727; uncharacterized protein D Msm_0614 conserved hypothetical protein Msm_0614 K09728 K09728; uncharacterized protein D Msm_0225 conserved hypothetical protein Msm_0225 K09729 K09729; uncharacterized protein D Msm_0285 conserved hypothetical protein Msm_0285 K09730 K09730; uncharacterized protein D Msm_1591 conserved hypothetical protein Msm_1591 K09738 K09738; uncharacterized protein D Msm_0088 conserved hypothetical protein Msm_0088 K09740 K09740; uncharacterized protein D Msm_0138 predicted exonuclease K07502 yprB; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024