+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Neisseria meningitidis 510612 (serogroup A)
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D NMA510612_0995 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D NMA510612_0656 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C NMA510612_0996 era; GTP-binding protein Era K03595 era; GTPase
C NMA510612_0364 obgE; putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C NMA510612_0230 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C NMA510612_2130 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C NMA510612_0992 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
B rRNA modification factors
C 16S rRNA modification factors
D NMA510612_1668 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D NMA510612_1010 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NMA510612_1732 SUN-family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NMA510612_0174 sun; SUN-like protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NMA510612_0165 DNA methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NMA510612_0578 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NMA510612_0099 gidB; methyltransferase GidB (glucose-inhibited division protein B) K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NMA510612_2341 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NMA510612_0358 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NMA510612_0602 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NMA510612_2029 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
C 23S rRNA modification factors
D NMA510612_1255 RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NMA510612_1131 ftsJ; cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D NMA510612_0450 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D NMA510612_1400 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D NMA510612_1750 hypothetical protein K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D NMA510612_2286 tou5 K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D NMA510612_1683 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NMA510612_1199 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NMA510612_0455 pantetheine-phosphate adenylyltransferase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NMA510612_1743 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NMA510612_0086 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D NMA510612_1016 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NMA510612_1138 RNA-binding protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
B ribosomal protein modification factors
C NMA510612_0643 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C NMA510612_0893 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C NMA510612_0657 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
C NMA510612_2150 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
B rRNA processing factors
C NMA510612_0995 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C NMA510612_0089 rne; ribonuclease E (RNase E) K08300 rne; ribonuclease E [EC:3.1.26.12]
C NMA510612_0749 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
C NMA510612_1718 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C NMA510612_0996 era; GTP-binding protein Era K03595 era; GTPase
C NMA510612_2530 engC; putative GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C NMA510612_1181 engA; GTP-binding protein engA K03977 engA; GTPase
C NMA510612_0364 obgE; putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
C NMA510612_1059 rbgA; ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A
C NMA510612_1598 hflX; GTP-binding protein K03665 hflX; GTPase
B Other maturation factors
C NMA510612_0257 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C NMA510612_2159 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C NMA510612_1760 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C NMA510612_2129 hypothetical protein K09748 rimP; ribosome maturation factor RimP
C NMA510612_0705 hypothetical protein K14761 rlbA; ribosome-associated protein
C NMA510612_0449 hypothetical protein K09710 ybeB; ribosome-associated protein
C NMA510612_0808 putative metalloprotease K07042 ybeY; probable rRNA maturation factor
C NMA510612_1132 hypothetical protein K07574 yhbY; RNA-binding protein
C NMA510612_1169 protein of hypothetical function DUF615 K09889 yjgA; ribosome-associated protein
C NMA510612_0684 putative GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
C NMA510612_0600 hypothetical protein K07040 yceD; DUF177 domain-containing protein
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024