+F Repair protein KO
#
DNA Repair and Recombination Proteins - Neofusicoccum parvum
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D UCRNP2_10013 putative methylated-dna-protein-cysteine methyltransferase protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D UCRNP2_4822 putative deoxyribodipyrimidine photo-lyase protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E UCRNP2_7337 putative uracil-dna glycosylase protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E UCRNP2_1118 putative g u mismatch-specific dna glycosylase protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E UCRNP2_7363 putative 8-oxoguanine dna glycosylase protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E UCRNP2_5268 putative dna base excision repair n-glycosylase 1 protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E UCRNP2_6508 putative dna-(apurinic or apyrimidinic site) lyase 1 protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E UCRNP2_4675 putative dna lyase protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F UCRNP2_7408 putative dna polymerase delta catalytic subunit protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F UCRNP2_2677 putative dna polymerase delta subunit 2 protein K02328 POLD2; DNA polymerase delta subunit 2
F UCRNP2_564 putative dna polymerase subunit cdc27 protein K03504 POLD3; DNA polymerase delta subunit 3
F UCRNP2_5041 putative dna polymerase delta subunit protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F UCRNP2_2829 putative dna polymerase epsilon catalytic subunit a protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F UCRNP2_4480 putative dna polymerase epsilon subunit b protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F UCRNP2_5946 putative cbf nf-y family transcription factor protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E UCRNP2_5622 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen
E UCRNP2_3691 putative dna-repair protein rad2 protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E UCRNP2_1332 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E UCRNP2_8933 putative histidine triad nucleotide binding protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E UCRNP2_9745 putative dna kinase phosphatase pnk1 protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F UCRNP2_3986 putative dna repair protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F UCRNP2_701 putative uv excision repair protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F UCRNP2_3000 putative ring-box protein 1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F UCRNP2_8118 putative ubiquitin ligase subunit protein K10609 CUL4; cullin 4
F UCRNP2_5027 putative uv-damaged dna binding protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F UCRNP2_6870 putative dna repair protein K15082 RAD7; DNA repair protein RAD7
F UCRNP2_6785 putative dna excision repair protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F UCRNP2_4847 putative dna-dependent rna polymerase ii largest protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F UCRNP2_6242 putative rna polymerase ii second largest subunit protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F UCRNP2_8207 putative rna polymerase ii subunit 3 protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F UCRNP2_3174 putative polymerase ii polypeptide d protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F UCRNP2_4246 putative rna polymerase subunit protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F UCRNP2_756 putative dna-directed rna polymerases i protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F UCRNP2_6064 putative rna polymerase ii subunit 7 protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F UCRNP2_8377 putative dna-directed rna polymerases and iii 145 kda polypeptide protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F UCRNP2_2979 putative dna directed rna polymerase ii 15 kda protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F UCRNP2_5245 putative dna-directed rna polymerases n 8 kda subunit superfamily protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F UCRNP2_2670 putative dna-directed rna polymerase ii protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F UCRNP2_1586 putative metallothionein-i gene transcription activator protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F UCRNP2_3000 putative ring-box protein 1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F UCRNP2_8118 putative ubiquitin ligase subunit protein K10609 CUL4; cullin 4
F UCRNP2_5027 putative uv-damaged dna binding protein K10610 DDB1; DNA damage-binding protein 1
F UCRNP2_7563 putative dna excision repair protein ercc-8 protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F UCRNP2_4339 putative dna repair and recombination protein rad26 protein K10841 ERCC6; DNA excision repair protein ERCC-6
F UCRNP2_6762 putative transcription elongation factor protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E UCRNP2_5593 putative tfiih complex helicase protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E UCRNP2_8816 putative tfiih complex helicase protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E UCRNP2_1646 putative rna polymerase ii transcription factor protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E UCRNP2_1813 putative transcription factor tfiih subunit protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E UCRNP2_272 putative tfiih and nucleotide excision repair factor 3 complexes subunit protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E UCRNP2_3625 putative rna polymerase ii transcription factor b subunit 5 protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E UCRNP2_3443 putative serine threonine protein kinase protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E UCRNP2_6791 putative cyclin protein K06634 CCNH; cyclin H
E UCRNP2_6089 putative cdk-activating kinase assembly factor mat1 protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E UCRNP2_7103 putative replication factor a rfa1 protein K07466 RFA1; replication factor A1
E UCRNP2_6141 putative replication factor-a protein K10739 RFA2; replication factor A2
E UCRNP2_9081 putative ssdna binding protein ssb3 protein K10740 RPA3; replication factor A3
D Other NER factors
E UCRNP2_6959 putative dna repair protein rad14 protein K10847 XPA; DNA-repair protein complementing XP-A cells
E UCRNP2_2280 putative mating-type switching protein swi10 protein K10849 ERCC1; DNA excision repair protein ERCC-1
E UCRNP2_2355 putative dna repair protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E UCRNP2_618 putative dna excision repair protein rad2 protein K10846 ERCC5; DNA excision repair protein ERCC-5
E UCRNP2_1332 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E UCRNP2_2080 putative dna repair transcription protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E UCRNP2_9214 putative scf ubiquitin ligase subunit protein K03869 CUL3; cullin 3
E UCRNP2_4830 putative transcriptional elongation regulator elc1 elongin c protein K03872 ELOC; elongin-C
E UCRNP2_3314 putative rna polymerase ii transcription factor siii subunit protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E UCRNP2_9924 putative dna mismatch repair protein msh-2 protein K08735 MSH2; DNA mismatch repair protein MSH2
E UCRNP2_3939 putative dna mismatch repair protein msh3 protein K08736 MSH3; DNA mismatch repair protein MSH3
E UCRNP2_6249 putative dna mismatch repair protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E UCRNP2_5021 putative dna mismatch repair protein K08734 MLH1; DNA mismatch repair protein MLH1
E UCRNP2_9667 putative dna mismatch repair protein pms1 protein K10858 PMS2; DNA mismatch repair protein PMS2
D DNA polymerase delta complex
E UCRNP2_7408 putative dna polymerase delta catalytic subunit protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E UCRNP2_2677 putative dna polymerase delta subunit 2 protein K02328 POLD2; DNA polymerase delta subunit 2
E UCRNP2_564 putative dna polymerase subunit cdc27 protein K03504 POLD3; DNA polymerase delta subunit 3
E UCRNP2_5041 putative dna polymerase delta subunit protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E UCRNP2_7103 putative replication factor a rfa1 protein K07466 RFA1; replication factor A1
E UCRNP2_6141 putative replication factor-a protein K10739 RFA2; replication factor A2
E UCRNP2_9081 putative ssdna binding protein ssb3 protein K10740 RPA3; replication factor A3
D RFC (replication factor C)
E UCRNP2_8561 putative chromosome transmission fidelity factor protein K10754 RFC1; replication factor C subunit 1
E UCRNP2_7 putative activator 1 41 kda subunit protein K10755 RFC2_4; replication factor C subunit 2/4
E UCRNP2_3747 putative replication factor c subunit 4 protein K10755 RFC2_4; replication factor C subunit 2/4
E UCRNP2_6864 putative replication factor c subunit 5 protein K10756 RFC3_5; replication factor C subunit 3/5
E UCRNP2_2241 putative replication factor c subunit 3 protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E UCRNP2_5622 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen
E UCRNP2_240 putative exonuclease protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E UCRNP2_1332 putative dna ligase protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E UCRNP2_4932 putative double-strand break repair protein mus-23 protein K10865 MRE11; double-strand break repair protein MRE11
E UCRNP2_5209 putative dna repair protein rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E UCRNP2_4932 putative double-strand break repair protein mus-23 protein K10865 MRE11; double-strand break repair protein MRE11
E UCRNP2_5209 putative dna repair protein rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E UCRNP2_6552 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E UCRNP2_6552 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51
E UCRNP2_10341 putative dna repair protein rad57 protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
D Rad54 family proteins
E UCRNP2_3689 putative dna repair and recombination protein rad54 protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E UCRNP2_4384 putative dsdna-dependent atpase protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
D Bloom's syndrome complex (BTR)
E UCRNP2_8419 putative dna topoisomerase iii protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E UCRNP2_1428 putative mediated genome instability protein rmi1 protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E UCRNP2_7103 putative replication factor a rfa1 protein K07466 RFA1; replication factor A1
E UCRNP2_6141 putative replication factor-a protein K10739 RFA2; replication factor A2
E UCRNP2_9081 putative ssdna binding protein ssb3 protein K10740 RPA3; replication factor A3
D Protein phosphatase 4
E UCRNP2_7942 putative duf625 domain protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E UCRNP2_8488 putative structural maintenance of chromosome complex subunit protein K22803 SMC5; structural maintenance of chromosomes protein 5
E UCRNP2_10210 putative dna repair protein rad18 protein K22804 SMC6; structural maintenance of chromosomes protein 6
E UCRNP2_5772 putative dna repair protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E UCRNP2_6384 putative nuclear protein qri2 protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E UCRNP2_6549 putative dss1 sem1 domain-containing protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E UCRNP2_5532 putative dna repair protein swi5 protein K10991 SWI5; DNA repair protein Swi5/Sae3
E UCRNP2_742 putative histone acetylase complex subunit mrg15-2 protein K11339 MORF4L1; mortality factor 4-like protein 1
E UCRNP2_248 putative wlm domain-containing protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E UCRNP2_5443 putative dsb repair complex subunit protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E UCRNP2_491 putative ku family dna protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E UCRNP2_4932 putative double-strand break repair protein mus-23 protein K10865 MRE11; double-strand break repair protein MRE11
E UCRNP2_5209 putative dna repair protein rad50 protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E UCRNP2_7417 putative dna ligase 4 protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E UCRNP2_4927 putative dna polymerase pol4 protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E UCRNP2_8933 putative histidine triad nucleotide binding protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
E UCRNP2_8419 putative dna topoisomerase iii protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E UCRNP2_1428 putative mediated genome instability protein rmi1 protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E UCRNP2_1302 putative coiled-coil domain-containing protein mtmr15 protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E UCRNP2_6552 putative dna repair protein rad51 protein K04482 RAD51; DNA repair protein RAD51
E UCRNP2_7774 putative wd repeat protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E UCRNP2_6144 putative wd repeat-containing protein 79 protein K23314 WRAP53; telomerase Cajal body protein 1
E UCRNP2_10173 putative wd repeat protein K24752 WDR70; WD repeat-containing protein 70
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D UCRNP2_2856 putative sister chromatid cohesion protein eso1 protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D UCRNP2_1867 putative dna polymerase protein K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D UCRNP2_349 putative dna-directed polymerase protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
C B-family DNA polymerases
D UCRNP2_7224 putative dna polymerase zeta catalytic subunit protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D UCRNP2_2545 putative ubiquitin-conjugating enzyme e2 2 protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D UCRNP2_8923 putative dna repair protein rad5 protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D UCRNP2_5677 putative snf2 family helicase protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D UCRNP2_873 putative ubiquitin-conjugating enzyme protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D UCRNP2_8272 putative ubiquitin conjugating enzyme protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D UCRNP2_5622 putative proliferating cell nuclear antigen protein K04802 PCNA; proliferating cell nuclear antigen
D UCRNP2_5126 putative hmg box-containing protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D UCRNP2_4158 putative dna repair protein rad9 protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D UCRNP2_10437 putative cell cycle checkpoint protein K10903 HUS1; HUS1 checkpoint protein
C HRAD17(Rad24)-RFC complex
D UCRNP2_3188 putative cell cycle checkpoint protein rad17 protein K06662 HRAD17; cell cycle checkpoint protein
D UCRNP2_7 putative activator 1 41 kda subunit protein K10755 RFC2_4; replication factor C subunit 2/4
D UCRNP2_3747 putative replication factor c subunit 4 protein K10755 RFC2_4; replication factor C subunit 2/4
D UCRNP2_6864 putative replication factor c subunit 5 protein K10756 RFC3_5; replication factor C subunit 3/5
D UCRNP2_2241 putative replication factor c subunit 3 protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
C FPC (fork protection complex)
D UCRNP2_4127 putative replication fork protection component protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D UCRNP2_1779 putative mrc1-like domain-containing protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D UCRNP2_2963 putative heat repeat protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D UCRNP2_6945 putative ubiquitin supergroup protein K23388 UBL4; ubiquitin-like protein 4
D UCRNP2_8461 putative duf410 domain-containing protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D UCRNP2_8948 putative phosphotidylinositol kinase protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D UCRNP2_9008 putative serine threonine-protein kinase chk1 protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D UCRNP2_2682 putative serine threonine-protein kinase chk2 protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D UCRNP2_3915 putative 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D UCRNP2_8750 putative 14-3-3 family protein K06630 YWHAE; 14-3-3 protein epsilon
D UCRNP2_4702 hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D UCRNP2_293 putative forkhead transcription factor fkh1 protein K24664 FKH; forkhead protein FKH
D UCRNP2_1366 putative vacuolar sorting atpase protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D UCRNP2_8608 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D UCRNP2_7099 putative dna polymerase protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D UCRNP2_7636 putative dna repair protein pso2 protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D UCRNP2_10073 putative nuclease s1 protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D UCRNP2_443 putative nuclease pa3 protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D UCRNP2_6544 putative dna excision repair protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D UCRNP2_4723 putative cell cycle control protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D UCRNP2_1337 putative cell division control protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D UCRNP2_2642 putative bcas2 family protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D UCRNP2_9461 putative pre-mrna-splicing factor prp46 protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D UCRNP2_9859 putative nudix protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UCRNP2_291 putative dutp diphosphatase protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D UCRNP2_2696 putative deoxyuridine 5 -triphosphate nucleotidohydrolase protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D UCRNP2_5331 putative ribonucleotide reductase large subunit protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D UCRNP2_6413 putative ribonucleotide reductase small subunit protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D UCRNP2_10013 putative methylated-dna-protein-cysteine methyltransferase protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D UCRNP2_4822 putative deoxyribodipyrimidine photo-lyase protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E UCRNP2_7337 putative uracil-dna glycosylase protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E UCRNP2_2287 putative formamidopyrimidine-dna protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E UCRNP2_5268 putative dna base excision repair n-glycosylase 1 protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E UCRNP2_9222 putative atp-depentend dna protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E UCRNP2_9222 putative atp-depentend dna protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D UCRNP2_9859 putative nudix protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UCRNP2_291 putative dutp diphosphatase protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D UCRNP2_2696 putative deoxyuridine 5 -triphosphate nucleotidohydrolase protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024