+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Nicotiana tomentosiformis</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        104091054 DNA-directed RNA polymerase II subunit 1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        104099860 DNA-directed RNA polymerase II subunit RPB2 isoform X1	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        104113800 DNA-directed RNA polymerase II subunit 2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        104099688 DNA-directed RNA polymerases II, IV and V subunit 3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        104120733 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
E        104101656 DNA-directed RNA polymerases II, IV and V subunit 11-like isoform X1	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        104110055 DNA-directed RNA polymerases IV and V subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        104085595 DNA-directed RNA polymerase II subunit 4 isoform X1	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        104092114 DNA-directed RNA polymerase II subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        104092980 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        104087420 DNA-directed RNA polymerase II subunit RPB7-like	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        104102070 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        104099840 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104101166 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104103735 DNA-directed RNA polymerase V subunit 5A isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104112086 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104109370 DNA-directed RNA polymerases II, IV and V subunit 6A-like isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104085507 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104085894 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104108784 DNA-directed RNA polymerases II and V subunit 8A isoform X8	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104120059 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104104682 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        104089997 DNA-directed RNA polymerase IV subunit 1 isoform X2	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        104114698 DNA-directed RNA polymerase V subunit 1 isoform X1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        104100209 DNA-directed RNA polymerases IV and V subunit 2	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        104113646 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        104107762 DNA-directed RNA polymerase V subunit 7-like isoform X1	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        104113649 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        104113697 transcription initiation factor IIA large subunit-like isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        104116892 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        104093028 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        104093029 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        104096691 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        104091905 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        104102329 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104109082 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104107483 transcription initiation factor TFIID subunit 1 isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        104114502 transcription initiation factor TFIID subunit 2-like isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        104098278 transcription initiation factor TFIID subunit 4b isoform X2	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        104116802 transcription initiation factor TFIID subunit 5 isoform X3	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        104088438 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        104107742 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        104099830 transcription initiation factor TFIID subunit 7 isoform X2	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        104085791 transcription initiation factor TFIID subunit 8-like isoform X1	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        104112555 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        104100284 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        104109371 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        104105336 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        104108661 transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        104104010 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        104090626 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        104113097 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104108711 transcription initiation factor TFIID subunit 12b-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104086143 transcription initiation factor TFIID subunit 12b-like isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104100168 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        104086949 general transcription factor IIE subunit 1 isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        104113925 uncharacterized protein LOC104113925	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        104097403 transcription initiation factor IIF subunit alpha isoform X2	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        104093005 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        104103189 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        104097189 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        104120729 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        104117023 RNA polymerase II transcription factor B subunit 4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        104092879 RNA polymerase II transcription factor B subunit 2-like isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        104120960 RNA polymerase II transcription factor B subunit 2-like isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        104118031 DNA repair helicase XPB1-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        104087265 DNA repair helicase XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        104085185 DNA repair helicase XPB1-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        104110078 DNA repair helicase XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        104086689 RNA polymerase II transcription factor B subunit 5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        104088267 cyclin-dependent kinase D-3-like isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        104086130 uncharacterized protein LOC104086130 isoform X1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        104112255 cyclin-H1-1 isoform X1	K06634 CCNH; cyclin H 
E        104100030 cyclin-H1-1-like isoform X1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        104088325 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        104118052 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        104091095 mediator of RNA polymerase II transcription subunit 11-like isoform X1	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        104096914 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        104085818 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        104087184 mediator of RNA polymerase II transcription subunit 22a-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        104107176 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        104108396 mediator of RNA polymerase II transcription subunit 7a-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        104101058 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        104102580 mediator of RNA polymerase II transcription subunit 10b-like isoform X1	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        104121190 mediator of RNA polymerase II transcription subunit 21 isoform X1	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        104111865 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        104104131 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        104107398 cyclin-dependent kinase E-1-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        104109134 cyclin-dependent kinase E-1-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        104110691 cyclin-C1-2-like isoform X1	K15161 CCNC; cyclin-C 
E        104104409 cyclin-C1-2-like isoform X1	K15161 CCNC; cyclin-C 
E        104092842 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        104108488 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        104101837 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        104099530 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        104091766 mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        104117260 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        104100043 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        104094284 mediator of RNA polymerase II transcription subunit 33A-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        104109639 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        104112773 histone acetyltransferase GCN5 isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        104096908 probable transcription-associated protein 1 isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        104086205 transcription-associated protein 1-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        104102249 transcriptional adapter ADA2-like isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        104103105 transcriptional adapter ADA2b isoform X2	K11314 TADA2A; transcriptional adapter 2-alpha 
E        104114502 transcription initiation factor TFIID subunit 2-like isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        104098278 transcription initiation factor TFIID subunit 4b isoform X2	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        104116802 transcription initiation factor TFIID subunit 5 isoform X3	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        104088438 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        104107742 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        104099830 transcription initiation factor TFIID subunit 7 isoform X2	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        104105336 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        104108661 transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        104113097 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104108711 transcription initiation factor TFIID subunit 12b-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104086143 transcription initiation factor TFIID subunit 12b-like isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104115644 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        104109904 SAGA-associated factor 29-like isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        104111681 protein CHROMATIN REMODELING 5 isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        104096495 transcription and mRNA export factor SUS1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        104115249 ubiquitin carboxyl-terminal hydrolase 22 isoform X2	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        104102544 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        104113966 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        104088026 pre-mRNA-splicing factor RSE1	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        104118551 ATP-dependent helicase BRM	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        104118361 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        104115802 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        104092763 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        104119678 SWI/SNF complex subunit SWI3A	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        104086938 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        104091966 SWI/SNF complex component SNF12 homolog isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        104096496 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        104105504 actin-related protein 4 isoform X1	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        104118361 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        104117546 RNA polymerase II transcriptional coactivator KIWI-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        104121483 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        104094295 cell division cycle and apoptosis regulator protein 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        104112516 transcription elongation factor TFIIS-like	K03145 TFIIS; transcription elongation factor S-II 
E        104115261 transcription elongation factor TFIIS-like	K03145 TFIIS; transcription elongation factor S-II 
E        104109472 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        104105454 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        104088574 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        104112857 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        104121178 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        104112737 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        104096744 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        104089804 cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        104119480 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        104094760 30-kDa cleavage and polyadenylation specificity factor 30-like isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        104118697 30-kDa cleavage and polyadenylation specificity factor 30-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        104110318 uncharacterized protein LOC104110318 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        104112565 serine/threonine-protein phosphatase PP1 isozyme 3	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104113106 serine/threonine-protein phosphatase PP1-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104098517 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104086971 serine/threonine-protein phosphatase PP1 isozyme 9	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104096647 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104114132 serine/threonine-protein phosphatase PP1-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104101398 serine/threonine-protein phosphatase PP1 isozyme 1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104093681 symplekin	K06100 SYMPK; symplekin 
E        104093925 symplekin isoform X1	K06100 SYMPK; symplekin 
E        104107559 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        104118156 5'-3' exoribonuclease 3-like isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        104091274 decapping nuclease DXO homolog, chloroplastic	K14845 RAI1; RAT1-interacting protein 
E        104104982 regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        104106245 uncharacterized protein LOC104106245	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        104098807 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        104119371 peptidyl-prolyl cis-trans isomerase Pin1-like	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        104104652 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        104102665 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        104110412 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        104092831 protein CTR9 homolog isoform X1	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        104108315 protein LEO1 homolog isoform X3	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        104114326 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        104102170 dentin sialophosphoprotein	K15186 EAF; ELL-associated factor 
E        104085805 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        104114852 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        104109177 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        104085805 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        104114852 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        104109177 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        104101236 probable RNA methyltransferase At5g51130 isoform X1	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        104096436 la-related protein 6A isoform X1	K15191 LARP7; La-related protein 7 
E        104098313 la-related protein 6B-like	K15191 LARP7; La-related protein 7 
E        104116545 la-related protein 6C isoform X1	K15191 LARP7; La-related protein 7 
E        104089142 la-related protein 6B-like	K15191 LARP7; La-related protein 7 
E        104103166 la-related protein 6C-like	K15191 LARP7; La-related protein 7 
E        104094140 la-related protein 6B isoform X1	K15191 LARP7; La-related protein 7 
E        104085805 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        104114852 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        104109177 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        104094648 TATA-binding protein-associated factor BTAF1 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        104104083 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        104093864 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        104110249 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        104110493 dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        104101892 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        104120121 protein spt2-like isoform X1	K15193 SPTY2D1; protein SPT2 
E        104107017 protein SPT2 homolog isoform X1	K15193 SPTY2D1; protein SPT2 
E        104114320 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        104085386 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        104117976 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        104107152 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        104105458 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        104114298 CTD small phosphatase-like protein 2	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        104108900 uncharacterized protein C2F7.02c-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        104104168 CTD nuclear envelope phosphatase 1 homolog isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        104090454 probable C-terminal domain small phosphatase	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        104104955 protein IWS1 homolog 2	K17498 SPN1; transcription factor SPN1 
E        104103706 transcriptional elongation regulator MINIYO-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        104097954 transcriptional elongation regulator MINIYO-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        104119405 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        104097905 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        104105353 RNA polymerase II-associated protein 3 isoform X2	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        104093712 MADS-box transcription factor 23-like	K12412 MCM1; pheromone receptor transcription factor 
E        104112077 agamous-like MADS-box protein AGL62	K12412 MCM1; pheromone receptor transcription factor 
E        104117220 MADS-box protein AGL71-like	K12412 MCM1; pheromone receptor transcription factor 
E        104118900 agamous-like MADS-box protein AGL62	K12412 MCM1; pheromone receptor transcription factor 
E        104114807 agamous-like MADS-box protein AGL61	K12412 MCM1; pheromone receptor transcription factor 
E        104110045 agamous-like MADS-box protein AGL61	K12412 MCM1; pheromone receptor transcription factor 
E        104100223 agamous-like MADS-box protein AGL62	K12412 MCM1; pheromone receptor transcription factor 
E        104103076 agamous-like MADS-box protein AGL61	K12412 MCM1; pheromone receptor transcription factor 
E        104096968 agamous-like MADS-box protein AGL62	K12412 MCM1; pheromone receptor transcription factor 
E        104110650 agamous-like MADS-box protein AGL29 isoform X1	K12412 MCM1; pheromone receptor transcription factor 
E        104104717 GPN-loop GTPase 3 isoform X2	K24104 GPN; GPN-loop GTPase 
E        104115106 GPN-loop GTPase 2 isoform X1	K24104 GPN; GPN-loop GTPase 
E        104118030 GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        104104038 DNA-directed RNA polymerase III subunit 1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        104099159 DNA-directed RNA polymerase III subunit 2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        104093336 DNA-directed RNA polymerases I and III subunit rpac1 isoform X2	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        104098040 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        104118458 DNA-directed RNA polymerase III subunit rpc3 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        104121328 uncharacterized protein LOC104121328	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        104101264 DNA-directed RNA polymerase III subunit RPC4-like isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        104113194 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        104102258 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        104116531 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        104112335 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        104118482 DNA-directed RNA polymerase III subunit rpc31	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        104095861 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        104093039 uncharacterized protein LOC104093039	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        104088703 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        104099840 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104101166 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104103735 DNA-directed RNA polymerase V subunit 5A isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104112086 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104109370 DNA-directed RNA polymerases II, IV and V subunit 6A-like isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104085507 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104085894 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104108784 DNA-directed RNA polymerases II and V subunit 8A isoform X8	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104120059 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104104682 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        104113875 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
E        104089129 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        104102329 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104109082 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104097124 transcription factor IIIB 60 kDa subunit-like isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        104103408 plant-specific TFIIB-related protein PTF2-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        104110099 plant-specific TFIIB-related protein PTF2-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        104110101 plant-specific TFIIB-related protein PTF2-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        104094944 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        104111163 uncharacterized protein LOC104111163 isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        104088747 uncharacterized protein LOC104088747	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        104104726 uncharacterized protein LOC104104726 isoform X1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        104085659 uncharacterized protein LOC104085659 isoform X2	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        104108879 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        104088172 general transcription factor 3C polypeptide 3-like isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        104094738 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        104117922 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        104090631 uncharacterized protein LOC104090631	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        104094738 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        104117922 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        104108879 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        104088172 general transcription factor 3C polypeptide 3-like isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        104106495 uncharacterized protein LOC104106495	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        104109828 uncharacterized protein LOC104109828	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        104100385 snRNA-activating protein complex subunit isoform X1	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        104104352 repressor of RNA polymerase III transcription MAF1 homolog isoform X1	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        104099855 DNA-directed RNA polymerase I subunit 1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        104114612 DNA-directed RNA polymerase I subunit 2 isoform X1	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        104093336 DNA-directed RNA polymerases I and III subunit rpac1 isoform X2	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        104098040 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        104112534 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        104087867 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        104099840 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104101166 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104103735 DNA-directed RNA polymerase V subunit 5A isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104112086 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104109370 DNA-directed RNA polymerases II, IV and V subunit 6A-like isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104085507 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104085894 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104108784 DNA-directed RNA polymerases II and V subunit 8A isoform X8	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104120059 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104104682 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        104102329 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104109082 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        104095275 high mobility group B protein 6-like isoform X1	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        104111744 RNA polymerase I-specific transcription initiation factor RRN3-like isoform X2	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        104110870 RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        104120015 upstream activation factor subunit spp27-like isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
E        104085170 upstream activation factor subunit UAF30-like isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        104109472 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        104105454 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        104088574 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        104112857 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        104101150 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        104089402 ISWI chromatin-remodeling complex ATPase CHR11-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        3776300 rpoA; RNA polymerase alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        3776378 rpoB; RNA polymerase beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        3776380 rpoC2; RNA polymerase beta'' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        3776379 rpoC1; RNA polymerase beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        108945874 uncharacterized protein LOC108945874	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        104119752 RNA polymerase sigma factor sigA-like isoform X1	K03086 rpoD; RNA polymerase primary sigma factor 
E        104097021 RNA polymerase sigma factor sigA-like isoform X1	K03086 rpoD; RNA polymerase primary sigma factor 
E        104114533 RNA polymerase sigma factor sigC	K03093 sigI; RNA polymerase sigma-I factor 
E        104096903 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        104093028 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        104093029 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        104096691 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        104091905 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        104086949 general transcription factor IIE subunit 1 isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 9, 2024