+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Nitrosococcus wardiae

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ACRISPR-Cas system B Universal Cas proteins C E3U44_12660 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 C E3U44_12665 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors D E3U44_12655 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D E3U44_12655 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D E3U44_12645 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D E3U44_12650 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D E3U44_12655 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D E3U44_12640 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d C Subtype I-D factors D E3U44_12655 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors D E3U44_03920 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D E3U44_12655 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C E3U44_07305 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C E3U44_13775 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C E3U44_18365 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C E3U44_00535 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C E3U44_07300 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C E3U44_13785 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C E3U44_18380 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C E3U44_17510 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C E3U44_18710 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C E3U44_00555 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C E3U44_07295 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C E3U44_13790 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C E3U44_17515 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C E3U44_18740 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C E3U44_00560 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D E3U44_19045 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_19135 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_00085 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_07040 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_10715 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C E3U44_00325 restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF D E3U44_01110 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K19156 prlF; antitoxin PrlF C RelE/StbE-RelB/StbD D E3U44_09845 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D E3U44_01190 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D E3U44_09840 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D E3U44_16955 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D E3U44_01195 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB C YafQ-dinJ C YoeB-YefM D E3U44_16970 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D E3U44_16975 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD D E3U44_01105 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd C HigB-HigA D E3U44_10825 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D E3U44_12945 hypothetical protein K07334 higB-1; toxin HigB-1 D E3U44_16980 peptidase K07334 higB-1; toxin HigB-1 D E3U44_04965 hypothetical protein K07334 higB-1; toxin HigB-1 D E3U44_05675 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D E3U44_18590 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D E3U44_10060 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D E3U44_09810 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_10830 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_15560 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_16985 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_17465 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_04970 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_05680 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_18585 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB D E3U44_18680 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D E3U44_18685 antitoxin K18829 mvpT; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D E3U44_00290 Arc family DNA-binding protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D E3U44_01995 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E3U44_01360 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E3U44_09380 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D E3U44_09375 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D E3U44_04720 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D E3U44_00740 hypothetical protein K19168 cptA; toxin CptA D E3U44_00745 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C E3U44_13055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023