+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Oryctolagus cuniculus (rabbit)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 100340576 mRNA cap guanine-N7 methyltransferase isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 100340242 mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 100358882 cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 100350011 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 100346528 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 100341138 RAMAC; RNA guanine-N7 methyltransferase activating subunit K18708 FAM103A1; RNMT-activating mini protein
E 100342182 RNA guanine-N7 methyltransferase activating subunit-like K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 100357449 nuclear cap-binding protein subunit 1 isoform X1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 100339832 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 100342787 cleavage and polyadenylation specificity factor subunit 5 isoform X1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 100357226 cleavage and polyadenylation specificity factor subunit 5-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 100353973 cleavage and polyadenylation specificity factor subunit 7 isoform X2 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 100340648 cleavage and polyadenylation specificity factor subunit 6 isoform X4 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 100350312 polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 100347292 pre-mRNA cleavage complex 2 protein Pcf11 isoform X3 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 127485576 cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 100346821 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 100354833 cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 100346062 cleavage and polyadenylation specificity factor subunit 4 isoform X2 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 100342324 putative cleavage and polyadenylation specificity factor subunit 4-like protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 100341056 pre-mRNA 3'-end-processing factor FIP1 isoform X9 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 100356036 pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 100346627 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 100009587 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 100009298 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 100353054 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103346471 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 100337928 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 100349788 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 100349354 cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 100342333 cleavage stimulation factor subunit 2 isoform X2 K14407 CSTF2; cleavage stimulation factor subunit 2
E 100344475 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2 tau variant-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 100357418 cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 100339047 cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 100348044 symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 100341600 small nuclear ribonucleoprotein-associated proteins B and B' isoform X1 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 100355799 small nuclear ribonucleoprotein-associated protein B-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 100357789 small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 100352696 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 100348389 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 100352744 small nuclear ribonucleoprotein G isoform X3 K11099 SNRPG; small nuclear ribonucleoprotein G
E 100341791 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 100355085 U7 snRNA-associated Sm-like protein LSm10 isoform X4 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 108176484 U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 100346821 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 100354833 cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 100342333 cleavage stimulation factor subunit 2 isoform X2 K14407 CSTF2; cleavage stimulation factor subunit 2
E 100344475 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2 tau variant-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 100357418 cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 100348044 symplekin K06100 SYMPK; symplekin
E 127486469 histone RNA hairpin-binding protein isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 100342805 CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 100355077 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 100356793 transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 100353801 N6-adenosine-methyltransferase catalytic subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 100340084 N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 100343651 N(6)-adenine-specific methyltransferase METTL4 isoform X4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 100354377 RNA N6-adenosine-methyltransferase METTL16 isoform X3 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 100339992 pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 100356620 VIRMA; protein virilizer homolog isoform X1 K22910 VIRMA; protein virilizer
E 100354796 RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 100341782 putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 100359041 zinc finger CCCH domain-containing protein 13 isoform X3 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 100358420 E3 ubiquitin-protein ligase Hakai isoform X5 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 100338861 poly(A) polymerase alpha isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 100352625 poly(A) polymerase beta K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 100344714 poly(A) polymerase gamma isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 100347742 TENT2; poly(A) RNA polymerase GLD2 isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 100340096 speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1 K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 100340914 BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 100351497 RNA-binding protein 26 isoform X5 K13192 RBM26; RNA-binding protein 26
E 100301537 FTO; alpha-ketoglutarate-dependent dioxygenase FTO K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 100339629 TAR DNA-binding protein 43 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 100352033 probable ATP-dependent RNA helicase DHX40 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 100345186 DNA/RNA-binding protein KIN17 isoform X1 K13102 KIN; DNA/RNA-binding protein KIN17
D 100350079 tRNA N(3)-methylcytidine methyltransferase METTL8, mitochondrial isoform X1 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 100347142 methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 100353928 TENT5A; terminal nucleotidyltransferase 5A isoform X1 K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 100343579 TENT5B; terminal nucleotidyltransferase 5B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 100358538 TENT5C; terminal nucleotidyltransferase 5C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 100342078 TENT5D; terminal nucleotidyltransferase 5D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 100337746 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 14-like K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 100351098 zinc finger CCCH domain-containing protein 14 isoform X1 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 100356723 RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A
E 100344696 protein mago nashi homolog 2 K12877 MAGOH; protein mago nashi
E 100354873 protein mago nashi homolog isoform X2 K12877 MAGOH; protein mago nashi
E 127489291 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 100349333 spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 127486475 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 100344655 coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 100358381 protein CASC3 K14323 CASC3; protein CASC3
E 100356364 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 100339760 pinin K13114 PNN; pinin
E 100338262 apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 100344881 RNA-binding protein with serine-rich domain 1 isoform X1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 100342974 serine/arginine repetitive matrix protein 1 isoform X5 K13171 SRRM1; serine/arginine repetitive matrix protein 1
E 100353425 LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like K13171 SRRM1; serine/arginine repetitive matrix protein 1
E 127487071 LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 100350164 THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 100342486 THO complex subunit 2 isoform X9 K12879 THOC2; THO complex subunit 2
E 100355684 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 100341471 THO complex subunit 5 homolog isoform X2 K13174 THOC5; THO complex subunit 5
E 103345666 THO complex subunit 6 homolog isoform X1 K13175 THOC6; THO complex subunit 6
E 100359296 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
E 100352941 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 100355258 PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 108178368 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 108176933 26S proteasome complex subunit SEM1-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 103351759 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 100347973 transcription and mRNA export factor ENY2 isoform X2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 100351004 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 100350600 centrin-2 K10840 CETN2; centrin-2
E 100358272 LOW QUALITY PROTEIN: centrin-2-like K10840 CETN2; centrin-2
E 100339564 centrin-3 isoform X2 K16466 CETN3; centrin-3
E 100357248 germinal-center associated nuclear protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 100346739 nucleoprotein TPR isoform X2 K09291 TPR; nucleoprotein TPR
E 100359017 mRNA export factor RAE1 isoform X1 K14298 RAE1; mRNA export factor
E 103350080 LOW QUALITY PROTEIN: mRNA export factor-like K14298 RAE1; mRNA export factor
E 100349294 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 100354175 nucleoporin Nup37 isoform X1 K14302 NUP37; nuclear pore complex protein Nup37
E 100343864 nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 100340965 nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 100359099 nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 100352600 nucleoporin p54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54
E 100357169 nucleoporin-62 C-terminal-like protein isoform X1 K14306 NUP62; nuclear pore complex protein Nup62
E 100355435 nuclear pore glycoprotein p62 isoform X1 K14306 NUP62; nuclear pore complex protein Nup62
E 100345268 nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88
E 127485438 LOW QUALITY PROTEIN: nuclear pore complex protein Nup88-like K14318 NUP88; nuclear pore complex protein Nup88
E 100344221 nuclear pore complex protein Nup93 isoform X2 K14309 NUP93; nuclear pore complex protein Nup93
E 100343626 nuclear pore complex protein Nup98-Nup96 isoform X5 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 100349229 nuclear pore complex protein Nup107 isoform X1 K14301 NUP107; nuclear pore complex protein Nup107
E 100339114 LOW QUALITY PROTEIN: nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 100344129 nucleoporin NUP188 isoform X1 K14311 NUP188; nuclear pore complex protein Nup188
E 100341571 nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 100347238 nuclear pore complex protein Nup155 isoform X1 K14312 NUP155; nuclear pore complex protein Nup155
E 100347548 nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 127490113 nuclear pore complex protein Nup160 isoform X1 K14303 NUP160; nuclear pore complex protein Nup160
E 100338394 nucleoporin NUP35 K14313 NUP35; nuclear pore complex protein Nup53
E 100344223 nuclear pore complex protein Nup205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 100348493 nuclear pore membrane glycoprotein 210-like isoform X2 K14314 NUP210; nuclear pore complex protein Nup210
E 100356186 nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210
E 100355984 nuclear pore complex protein Nup214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 100352619 POM121-like protein 2 K14316 POM121; nuclear pore complex protein Nup121
E 100346579 nuclear envelope pore membrane protein POM 121 isoform X1 K14316 POM121; nuclear pore complex protein Nup121
E 100343073 nuclear envelope pore membrane protein POM 121C isoform X2 K14316 POM121; nuclear pore complex protein Nup121
E 100349090 putative nuclear envelope pore membrane protein POM 121B K14316 POM121; nuclear pore complex protein Nup121
E 100339460 nuclear envelope pore membrane protein POM 121C-like K14316 POM121; nuclear pore complex protein Nup121
E 100338144 nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 100338743 NUP42; nucleoporin NUP42 isoform X1 K14321 NUPL2; nucleoporin-like protein 2
E 100354365 nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 100356812 nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1
E 100338469 E3 SUMO-protein ligase RanBP2 isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 100345348 sentrin-specific protease 2 isoform X2 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 100356621 aladin isoform X1 K14320 AAAS; aladin
E 100339564 centrin-3 isoform X2 K16466 CETN3; centrin-3
E 100351460 mRNA export factor GLE1 K18723 GLE1; nucleoporin GLE1
E 100347351 nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 100342837 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
E 103351963 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 100340535 nuclear RNA export factor 2 isoform X2 K14284 NXF; nuclear RNA export factor
E 100339773 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 100338777 nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
E 100339936 NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2
E 100351903 NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 100352306 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 100357230 LOW QUALITY PROTEIN: GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 100342512 acidic leucine-rich nuclear phosphoprotein 32 family member A K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 100347621 acidic leucine-rich nuclear phosphoprotein 32 family member B K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 100126074 TNFSF13; tumor necrosis factor ligand superfamily member 13 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 100353220 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 100359216 ELAV-like protein 4 isoform X6 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 100351211 ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 127489049 ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 100352486 FAS-associated factor 2 isoform X1 K18726 FAF2; FAS-associated factor 2
E 100339785 transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 100346134 protein N-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 100352992 transportin-2 isoform X1 K18727 TNPO2; transportin-2
E 100343451 exportin-1 isoform X2 K14290 XPO1; exportin-1
E 100354997 exportin-7 isoform X2 K18460 XPO7; exportin-7
E 100357561 ran-binding protein 17 isoform X1 K24115 RANBP17; Ran-binding protein 17
E 100357692 ran GTPase-activating protein 1 isoform X1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 100348020 TATA-binding protein-associated factor 2N K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 100348102 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 100009338 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 100354512 eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 100341294 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 100328965 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 100355889 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 100357733 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 100344936 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 100351055 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-II-like K03257 EIF4A; translation initiation factor 4A
E 100009384 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 100009236 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 100341364 eukaryotic translation initiation factor 4 gamma 3 isoform X23 K03260 EIF4G; translation initiation factor 4G
E 100354421 eukaryotic translation initiation factor 4B isoform X4 K03258 EIF4B; translation initiation factor 4B
E 100343763 eukaryotic translation initiation factor 4H K24086 EIF4H; translation initiation factor 4H
E 100338850 eukaryotic translation initiation factor 4E-binding protein 1 K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 100342908 eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 100532745 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 100328731 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 100357773 protein angel homolog 1 isoform X3 K18729 ANGEL; protein angel
E 100345524 protein angel homolog 2 isoform X3 K18729 ANGEL; protein angel
E 100354894 fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100340080 RNA-binding protein FXR1 isoform X4 K15516 FMR; fragile X mental retardation protein
E 100343838 RNA-binding protein FXR2 K15516 FMR; fragile X mental retardation protein
E 100339839 cytoplasmic FMR1-interacting protein 1 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 100352485 cytoplasmic FMR1-interacting protein 2 isoform X2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 100347642 gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 100358916 cytoplasmic polyadenylation element-binding protein 1 isoform X9 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100343198 cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100351062 cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100341373 cytoplasmic polyadenylation element-binding protein 3 isoform X3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100348597 ATP-dependent RNA helicase DDX3X isoform X2 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 100341602 GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 100348353 GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 100351201 polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 100340846 polyadenylate-binding protein 4 isoform X3 K13126 PABPC; polyadenylate-binding protein
E 100353191 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 100342434 polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 100350595 polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 100356494 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 100340779 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 100340865 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 100340240 polyadenylate-binding protein-interacting protein 1 isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 100348132 polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 100346691 polyadenylate-binding protein-interacting protein 2B isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 100356195 SKIC2; helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 127488892 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 100350732 malignant T-cell-amplified sequence 2 K07575 MCTS; malignant T-cell-amplified sequence
E 100350608 malignant T-cell-amplified sequence 1-like K07575 MCTS; malignant T-cell-amplified sequence
E 100349232 malignant T-cell-amplified sequence 1 K07575 MCTS; malignant T-cell-amplified sequence
E 100352615 malignant T-cell-amplified sequence 1 isoform X2 K07575 MCTS; malignant T-cell-amplified sequence
E 127488434 malignant T-cell-amplified sequence 1-like K07575 MCTS; malignant T-cell-amplified sequence
E 100343358 density-regulated protein isoform X1 K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 100009191 APOBEC1; C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 100339264 APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 100342436 partner of Y14 and mago isoform X1 K14294 WIBG; partner of Y14 and mago
E 127487401 partner of Y14 and mago isoform X1 K14294 WIBG; partner of Y14 and mago
E 100351044 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100348667 heterogeneous nuclear ribonucleoprotein A3-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100340058 heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100345587 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100343444 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100359118 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100352496 heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100358947 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100343627 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100347480 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100356512 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108175381 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 127485802 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 127488641 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 127489662 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100342991 RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 100352797 RNA-binding protein Musashi homolog 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 127485675 DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 100338746 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 100344574 protein pelota homolog K06965 PELO; protein pelota
E 100345355 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 127488515 LOW QUALITY PROTEIN: polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 100339723 ATP-dependent RNA helicase DDX19A K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 100340393 ATP-dependent RNA helicase DDX19B isoform X2 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 100352895 ATP-dependent RNA helicase DDX25 isoform X1 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 100340616 pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 103348291 SAP domain-containing ribonucleoprotein isoform X2 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 127487416 SAP domain-containing ribonucleoprotein isoform X1 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 100352855 RCC1; regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation
E 103349074 regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation
E 100341132 la-related protein 6 K18733 LARP6; la-related protein 6
E 100345406 transcriptional activator protein Pur-alpha isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha
E 100338406 transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 100348030 polymerase delta-interacting protein 3 isoform X1 K22414 POLDIP3; polymerase delta-interacting protein 3
E 100353453 zinc finger CCCH domain-containing protein 11A isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 100356903 protein PAT1 homolog 2 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 100009553 ETF1; eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1
E 100355899 LOW QUALITY PROTEIN: eukaryotic peptide chain release factor subunit 1-like K03265 ETF1; peptide chain release factor subunit 1
E 100355660 eukaryotic peptide chain release factor GTP-binding subunit ERF3B K03267 ERF3; peptide chain release factor subunit 3
E 100008618 eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 127482716 regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 100354055 regulator of nonsense transcripts 2 isoform X2 K14327 UPF2; regulator of nonsense transcripts 2
E 103346328 regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 100341564 regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 100009252 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 100009300 PPP2CB; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 100355092 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 100355758 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X3 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 100328617 PPP2R2C; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 100009139 PPP2R2B; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 100328616 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 100348286 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 100355159 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 100356580 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 100353545 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 100009434 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 100346997 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 100009533 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 100009216 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 100009215 PPP2R5B; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 100354937 serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 100341361 nonsense-mediated mRNA decay factor SMG5 K11125 SMG5; protein SMG5
E 100355820 telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 100339791 nonsense-mediated mRNA decay factor SMG7 isoform X2 K14409 SMG7; protein SMG7
E 100353049 nonsense-mediated mRNA decay factor SMG8 K18734 SMG8; protein SMG8
E 100349625 nonsense-mediated mRNA decay factor SMG9 K18735 SMG9; protein SMG9
E 100341602 GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 100348353 GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 100347869 selenocysteine insertion sequence-binding protein 2 isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 100350429 selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 100353485 probable ATP-dependent RNA helicase DHX34 isoform X1 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 100359282 GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 100338369 pumilio homolog 3 isoform X3 K14844 PUF6; pumilio homology domain family member 6
E 100357658 pumilio homolog 3-like K14844 PUF6; pumilio homology domain family member 6
E 100346225 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 100346740 unconventional myosin-Vc K10357 MYO5; myosin V
E 100008736 unconventional myosin-Vb K10357 MYO5; myosin V
E 100351714 protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 100348480 protein bicaudal D homolog 1 isoform X1 K18739 BICD; protein bicaudal D
E 100344342 piRNA biogenesis protein EXD1 isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 100008822 actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 100009272 ACTB; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 100341037 LOW QUALITY PROTEIN: actin, cytoplasmic 2-like K05692 ACTB_G1; actin beta/gamma 1
E 100344447 myelin basic protein isoform X1 K17269 MBP; myelin basic protein
E 100008924 vimentin K07606 VIM; vimentin
E 103350073 metallothionein-II, hippocampal-like K14739 MT1_2; metallothionein 1/2
E 100343299 metallothionein-2A K14739 MT1_2; metallothionein 1/2
E 100343802 metallothionein-1A K14739 MT1_2; metallothionein 1/2
E 100343557 metallothionein-2D K14739 MT1_2; metallothionein 1/2
E 100327265 MYC; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 127485958 embryonic growth/differentiation factor 1 K05495 GDF1; growth differentiation factor 1
E 100343206 T-box transcription factor TBX6 isoform X2 K10180 TBX6; T-box protein 6
E 100353558 nanos homolog 1 K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 100345436 far upstream element-binding protein 1 isoform X1 K13210 FUBP; far upstream element-binding protein
E 100353332 far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
E 100008677 EEF1A2; elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 100009189 EEF1A1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 100345095 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 127492692 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 100009282 EEF1G; elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 127482561 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 100353281 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 100342633 heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 100348155 HCLS1-associated protein X-1 isoform X1 K16220 HAX1; HCLS1-associated protein X-1
E 100358680 arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 100357523 double-stranded RNA-binding protein Staufen homolog 1 isoform X2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 100340385 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 100351075 insulin-like growth factor 2 mRNA-binding protein 3 isoform X1 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 127490144 polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 100358916 cytoplasmic polyadenylation element-binding protein 1 isoform X9 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100343198 cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100351062 cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100341373 cytoplasmic polyadenylation element-binding protein 3 isoform X3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 100354894 fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100340080 RNA-binding protein FXR1 isoform X4 K15516 FMR; fragile X mental retardation protein
E 100343838 RNA-binding protein FXR2 K15516 FMR; fragile X mental retardation protein
E 100339839 cytoplasmic FMR1-interacting protein 1 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 100352485 cytoplasmic FMR1-interacting protein 2 isoform X2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 100356497 poly(rC)-binding protein 2 K13162 PCBP2; poly(rC)-binding protein 2
E 100353293 poly(rC)-binding protein 2-like isoform X2 K13162 PCBP2; poly(rC)-binding protein 2
E 100357382 poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 100344200 poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 100345078 poly(rC)-binding protein 4 isoform X2 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 100340048 caprin-1 isoform X1 K18743 CAPRIN1; caprin-1
E 100351407 caprin-2 isoform X1 K18744 CAPRIN2; caprin-2
E 100009583 YBX1; Y-box-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 100344478 Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 100356968 Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 100357477 Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 100351589 5'-3' exoribonuclease 1 isoform X3 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 100356842 protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 100347349 protein argonaute-1 isoform X2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 100357099 protein argonaute-4 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 100009457 AGO2; protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 100348102 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 100009338 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 100354512 eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 127482716 regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 100348597 ATP-dependent RNA helicase DDX3X isoform X2 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 100356412 probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 100353875 RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 100344581 LOW QUALITY PROTEIN: RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 100343811 RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 100343065 fas-activated serine/threonine kinase isoform X1 K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 127488312 fas-activated serine/threonine kinase isoform X1 K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 100355244 protein LSM14 homolog A-like isoform X1 K18749 LSM14; protein LSM14
E 100346520 protein LSM14 homolog B isoform X1 K18749 LSM14; protein LSM14
E 100354599 protein LSM14 homolog A isoform X1 K18749 LSM14; protein LSM14
E 100008848 PCBP1; poly(rC)-binding protein 1 K12889 PCBP1; poly(rC)-binding protein 1
E 100356497 poly(rC)-binding protein 2 K13162 PCBP2; poly(rC)-binding protein 2
E 100353293 poly(rC)-binding protein 2-like isoform X2 K13162 PCBP2; poly(rC)-binding protein 2
E 100357382 poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 100009583 YBX1; Y-box-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 100344478 Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 100356968 Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 100357477 Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 100358827 Wilms tumor protein 1-interacting protein isoform X1 K16682 AJUBA; LIM domain-containing protein
E 100359157 LIM domain-containing protein ajuba isoform X1 K16682 AJUBA; LIM domain-containing protein
E 100356027 Wilms tumor protein 1-interacting protein K16682 AJUBA; LIM domain-containing protein
E 100351579 LIM domain-containing protein 1 K16682 AJUBA; LIM domain-containing protein
E 100009191 APOBEC1; C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 103348387 DNA dC->dU-editing enzyme APOBEC-3A isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100340649 DNA dC->dU-editing enzyme APOBEC-3 isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100355558 helicase MOV-10 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 100355072 proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 100345936 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 100344584 PNRC2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 100359261 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 100354587 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 127486844 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 127486969 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 100343169 transportin-1 isoform X1 K18752 TNPO1; transportin-1
E 100354937 serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 100341361 nonsense-mediated mRNA decay factor SMG5 K11125 SMG5; protein SMG5
E 100355820 telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 100339791 nonsense-mediated mRNA decay factor SMG7 isoform X2 K14409 SMG7; protein SMG7
E 100340391 mRNA decay activator protein ZFP36 K15308 TTP; tristetraprolin
E 100349183 mRNA decay activator protein ZFP36L1 K18753 ZFP36L; butyrate response factor
E 100351567 LOW QUALITY PROTEIN: mRNA decay activator protein ZFP36L2 K18753 ZFP36L; butyrate response factor
E 100357100 protein lin-28 homolog A K18754 LIN28; protein lin-28
E 100359224 protein lin-28 homolog A K18754 LIN28; protein lin-28
E 100343404 protein lin-28 homolog B isoform X3 K18754 LIN28; protein lin-28
E 100343140 protein lin-28 homolog A-like K18754 LIN28; protein lin-28
E 100351801 huntingtin K04533 HD; huntingtin
E 103348956 importin-8 isoform X1 K18755 IPO8; importin-8
E 100354974 protein bicaudal C homolog 1 isoform X1 K18756 BICC1; protein bicaudal C
E 100351044 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100348667 heterogeneous nuclear ribonucleoprotein A3-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100340058 heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100345587 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100343444 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100359118 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100352496 heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100358947 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100343627 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100347480 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100356512 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108175381 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 127485802 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 127488641 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 127489662 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100008815 PRKACA; cAMP-dependent protein kinase catalytic subunit alpha K04345 PKA; protein kinase A [EC:2.7.11.11]
E 100342212 cAMP-dependent protein kinase catalytic subunit beta isoform X3 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 100350476 la-related protein 1 isoform X1 K18757 LARP1; la-related protein 1
E 100346995 la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1
E 100344724 ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
E 100353562 ataxin-2 isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 100354990 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 100349581 mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 103349007 mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 100353471 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 100353275 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 100346711 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 100345430 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 103347114 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 100347824 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 100340511 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 100358159 LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 127487527 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 100354735 kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 100353930 kinesin light chain 4 isoform X1 K10407 KLC; kinesin light chain
E 127489739 kinesin light chain 2 isoform X1 K10407 KLC; kinesin light chain
E 100346225 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 100346740 unconventional myosin-Vc K10357 MYO5; myosin V
E 100008736 unconventional myosin-Vb K10357 MYO5; myosin V
E 100348075 tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 100350046 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 100353478 tubulin alpha chain-like 3 isoform X1 K07374 TUBA; tubulin alpha
E 100355248 tubulin alpha-8 chain K07374 TUBA; tubulin alpha
E 100349209 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 100350967 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 100350027 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 100346652 tubulin alpha-1C chain K07374 TUBA; tubulin alpha
E 100009327 TUBA1B; tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 100340483 tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 100357567 tubulin alpha-1C chain K07374 TUBA; tubulin alpha
E 100354352 tubulin alpha-4A chain isoform X2 K07374 TUBA; tubulin alpha
E 100340939 tubulin alpha-8 chain-like isoform X1 K07374 TUBA; tubulin alpha
E 100358916 cytoplasmic polyadenylation element-binding protein 1 isoform X9 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100343198 cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100351062 cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100341373 cytoplasmic polyadenylation element-binding protein 3 isoform X3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100347642 gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 100337846 trinucleotide repeat-containing gene 6B protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 100356798 trinucleotide repeat-containing gene 6A protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 103346563 LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6C protein K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 100348223 CCR4-NOT transcription complex subunit 1 isoform X6 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 100342367 CCR4-NOT transcription complex subunit 2 isoform X2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 100328776 CNOT3; CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 100343803 CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 100343097 CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 100350183 CCR4-NOT transcription complex subunit 6-like isoform X2 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 100351543 CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100347556 CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100350728 CCR4-NOT transcription complex subunit 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100355033 GARRE1; granule associated Rac and RHOG effector protein 1 isoform X1 K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 103352481 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 100344728 uncharacterized protein LOC100344728 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 100351819 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X6 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 127487387 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 100343098 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 100353216 protein Tob2 K14443 TOB; protein Tob/BTG
E 100349594 protein BTG3 isoform X2 K14443 TOB; protein Tob/BTG
E 100339845 protein Tob1 K14443 TOB; protein Tob/BTG
E 100354553 protein BTG2 K14443 TOB; protein Tob/BTG
E 100344815 protein BTG1 K14443 TOB; protein Tob/BTG
E 100350876 protein BTG4 isoform X2 K14443 TOB; protein Tob/BTG
E 100328731 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 100355434 protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 100345820 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 100352833 enhancer of mRNA-decapping protein 4 isoform X4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 100342359 nanos homolog 3 K18761 NANOS3; protein nanos 3
E 100354055 regulator of nonsense transcripts 2 isoform X2 K14327 UPF2; regulator of nonsense transcripts 2
E 103346328 regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 100341564 regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 100345560 E3 ubiquitin-protein ligase TRIM21 K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 100339006 E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 100347609 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 100009013 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 103346063 zygote arrest protein 1 K18762 ZAR1; zygote arrest protein 1
E 100356329 ZAR1-like protein isoform X1 K18762 ZAR1; zygote arrest protein 1
E 100339375 YTH domain-containing family protein 1 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 100350319 YTH domain-containing family protein 3 isoform X4 K20102 YTHDF; YTH domain-containing family protein
E 100351518 LOW QUALITY PROTEIN: YTH domain-containing family protein 2 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 100354811 nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 100337795 cytotoxic granule associated RNA binding protein TIA1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 100351201 polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 100340846 polyadenylate-binding protein 4 isoform X3 K13126 PABPC; polyadenylate-binding protein
E 100353191 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 100342434 polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 100350595 polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 100356494 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 100340779 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 100340865 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 100357523 double-stranded RNA-binding protein Staufen homolog 1 isoform X2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 100340385 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 100354894 fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100340080 RNA-binding protein FXR1 isoform X4 K15516 FMR; fragile X mental retardation protein
E 100343838 RNA-binding protein FXR2 K15516 FMR; fragile X mental retardation protein
E 100353220 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 100347970 ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 100353286 ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 100355114 ras GTPase-activating protein-binding protein 1-like K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 100353618 ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 100338417 eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 100345215 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 100341294 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 100328965 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 100355889 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 100357733 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 100344936 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 100351055 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-II-like K03257 EIF4A; translation initiation factor 4A
E 127486475 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 100354421 eukaryotic translation initiation factor 4B isoform X4 K03258 EIF4B; translation initiation factor 4B
E 100009384 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 100009236 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 100341364 eukaryotic translation initiation factor 4 gamma 3 isoform X23 K03260 EIF4G; translation initiation factor 4G
E 100344451 ribosomal protein S6 kinase alpha-2 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100341883 LOW QUALITY PROTEIN: ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100358702 ribosomal protein S6 kinase alpha-1 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100338014 ribosomal protein S6 kinase alpha-3 isoform X2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100349186 ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100009557 receptor of activated protein C kinase 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 100347351 nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 100342837 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
E 103351963 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 100340535 nuclear RNA export factor 2 isoform X2 K14284 NXF; nuclear RNA export factor
E 100339773 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 100338777 nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
E 100354982 histone deacetylase 6 isoform X2 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 103345620 nucleolar complex protein 4 homolog isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 100358354 tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3
E 100359254 la-related protein 4B isoform X1 K18763 LARP4; la-related protein 4
E 100344218 la-related protein 4 isoform X3 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 100349581 mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 103349007 mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 100354990 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 100356412 probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 100345820 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 100352833 enhancer of mRNA-decapping protein 4 isoform X4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 100355434 protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 100353471 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 100353275 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 100346711 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 100345430 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 103347114 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 100347824 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 100340511 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 100358159 LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 127487527 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 100351589 5'-3' exoribonuclease 1 isoform X3 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 100353161 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 100338666 U8 snoRNA-decapping enzyme K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
E 100338916 U8 snoRNA-decapping enzyme K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 100338456 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 108175353 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 100338520 probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 100356135 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 100343630 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
E 100346424 exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 100341140 exosome complex component RRP40 isoform X1 K03681 RRP40; exosome complex component RRP40
E 100342181 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 100357530 exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 108176744 exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 100351072 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 100341983 exosome complex component RRP43 isoform X1 K12586 RRP43; exosome complex component RRP43
E 100355640 exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 100348230 exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 100348591 DIS3-like exonuclease 1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 100355915 exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 100338047 nuclear nucleic acid-binding protein C1D isoform X2 K12592 C1D; exosome complex protein LRP1
E 100346767 nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 100357940 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1
E 100340651 M-phase phosphoprotein 6 isoform X1 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 100345657 probable ATP-dependent RNA helicase DDX60 isoform X1 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 103346374 LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 103346717 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 103346302 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 100357616 TENT4B; terminal nucleotidyltransferase 4B isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 100350123 TENT4A; terminal nucleotidyltransferase 4A isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 100348040 zinc finger CCHC domain-containing protein 7 isoform X2 K12597 AIR1_2; protein AIR1/2
E 100347578 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 100356195 SKIC2; helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 127488892 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 100343902 SKIC3; tetratricopeptide repeat protein 37 isoform X1 K12600 SKI3; superkiller protein 3
E 100341647 SKIC8; WD repeat-containing protein 61 isoform X1 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 100343097 CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 100350183 CCR4-NOT transcription complex subunit 6-like isoform X2 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 100348223 CCR4-NOT transcription complex subunit 1 isoform X6 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 100342367 CCR4-NOT transcription complex subunit 2 isoform X2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 100328776 CNOT3; CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 100343803 CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 100351543 CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100347556 CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100350728 CCR4-NOT transcription complex subunit 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100351154 CCR4-NOT transcription complex subunit 9 isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 100347070 CCR4-NOT transcription complex subunit 10 isoform X4 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 100351819 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X6 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 127487387 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 100343098 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 100351489 poly(A)-specific ribonuclease PARN isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 100357330 poly(A)-specific ribonuclease PNLDC1 isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 100355806 ATP-dependent DNA/RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 100353216 protein Tob2 K14443 TOB; protein Tob/BTG
E 100349594 protein BTG3 isoform X2 K14443 TOB; protein Tob/BTG
E 100339845 protein Tob1 K14443 TOB; protein Tob/BTG
E 100354553 protein BTG2 K14443 TOB; protein Tob/BTG
E 100344815 protein BTG1 K14443 TOB; protein Tob/BTG
E 100350876 protein BTG4 isoform X2 K14443 TOB; protein Tob/BTG
E 100328720 CSF2; granulocyte-macrophage colony-stimulating factor precursor K05427 CSF2; granulocyte-macrophage colony-stimulating factor
E 100348337 nocturnin isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 100350785 3'-5' exoribonuclease 1 isoform X1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 100345671 ERI1 exoribonuclease 2 isoform X1 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 100338456 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 108175353 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 100353603 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 100341900 iron-responsive element-binding protein 2 isoform X1 K22416 IREB2; iron-responsive element-binding protein 2
E 100338520 probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 100350352 nuclear exosome regulator NRDE2 K26109 NRDE2; nuclear exosome regulator NRDE2
E 100356482 protein Smaug homolog 1 isoform X1 K27396 SMG; protein Smaug
E 100357729 protein Smaug homolog 2 K27396 SMG; protein Smaug
E 100358488 focadhesin isoform X1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 100351089 ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 103351154 RAF2; ribonuclease 2B K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 103351156 non-secretory ribonuclease K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 100350584 ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 100350838 ribonuclease K6 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 100356315 ribonuclease 8 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 100352281 ribonuclease 8 isoform X2 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 100350102 probable ribonuclease 11 K16633 RNASE11; ribonuclease 11 [EC:3.1.27.-]
E 100340443 endoribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 103345495 probable ribonuclease ZC3H12D isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 100356747 probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 100353395 probable ribonuclease ZC3H12C isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 100349331 ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 100338541 oligoribonuclease, mitochondrial isoform X3 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 100352426 alpha-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 100008769 ENO3; beta-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 100348989 gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 100358071 polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 100345647 ATP-dependent 6-phosphofructokinase, muscle type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 100009526 PFKP; ATP-dependent 6-phosphofructokinase, platelet type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 103347367 LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase, liver type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 103351840 LOW QUALITY PROTEIN: stress-70 protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 100347135 stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 100349912 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 100346424 exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 100356135 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 100343630 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
D Cofactors
E 100342181 exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 100351072 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024