+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Oncorhynchus tshawytscha (Chinook salmon)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        112260051 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        112214767 DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        112220984 DNA-directed RNA polymerase II subunit RPB2 isoform X1	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        112256269 DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        112252283 polr2c; DNA-directed RNA polymerase II subunit RPB3 isoform X1	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        112257932 polr2j; DNA-directed RNA polymerase II subunit RPB11-a	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        112238832 DNA-directed RNA polymerase II subunit RPB4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        112234011 polr2d; DNA-directed RNA polymerase II subunit RPB4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        112221281 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        112234833 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        112267176 polr2i; DNA-directed RNA polymerase II subunit RPB9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        112263720 polr2m; LOW QUALITY PROTEIN: protein GRINL1A	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        112260793 DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        112252226 polr2eb; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        112226160 DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        112258772 DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        112253288 polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        112236595 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        112247043 DNA-directed RNA polymerases I, II, and III subunit RPABC5 isoform X1	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        112263813 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        112250462 gtf2a1; transcription initiation factor IIA subunit 1 isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        112217942 transcription initiation factor IIA subunit 1 isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        121844054 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        121845913 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        112260274 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        112227105 gtf2b; transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        112242338 tbpl1; LOW QUALITY PROTEIN: TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112259849 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112261587 tbpl2; TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112256862 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112224529 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112257753 transcription initiation factor TFIID subunit 1 isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        112228653 transcription initiation factor TFIID subunit 1 isoform X3	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        112239762 taf2; transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        112218917 transcription initiation factor TFIID subunit 3 isoform X1	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        112252706 transcription initiation factor TFIID subunit 3	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        112218834 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112222179 transcription initiation factor TFIID subunit 4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112252637 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112215173 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112249605 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112219544 taf4a; transcription initiation factor TFIID subunit 4 isoform X3	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112237507 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112251288 taf4b; transcription initiation factor TFIID subunit 4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112245857 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        112230250 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        112265247 taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        112222207 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        112216749 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        112260079 taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        112218355 taf6; transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        112256168 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        112221776 transcription initiation factor TFIID subunit 8 isoform X1	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        112216310 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        112228616 taf9; transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        112257786 transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        112221374 transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        112233049 taf10; transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        112216127 taf11; transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        112234213 taf12; transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        112235444 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        112216007 taf13; transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        112222371 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        112225254 gtf2e1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        112255855 general transcription factor IIE subunit 2	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        121844611 general transcription factor IIE subunit 2-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        112238747 general transcription factor IIF subunit 1 isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        121844694 general transcription factor IIF subunit 1-like isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        112239989 gtf2f2b; general transcription factor IIF subunit 2b isoform X1	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        121844505 gtf2f2a; general transcription factor IIF subunit 2 isoform X1	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        112242150 gtf2h1; general transcription factor IIH subunit 1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        112262528 gtf2h2; general transcription factor IIH subunit 2 isoform X1	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        112245944 gtf2h3; general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        112229405 gtf2h4; general transcription factor IIH subunit 4	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        121844506 LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPB-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        112265301 ercc2; general transcription and DNA repair factor IIH helicase subunit XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        112217727 gtf2h5; general transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        112248573 cdk7; cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        112256765 mnat1; CDK-activating kinase assembly factor MAT1 isoform X1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        112263374 ccnh; cyclin-H isoform X1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        112262250 med6; mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        112251271 mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        112249937 mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        112214521 mediator of RNA polymerase II transcription subunit 11 isoform X2	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        112247780 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        112267232 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        112223106 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        112246632 mediator of RNA polymerase II transcription subunit 18-like	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        112256257 mediator of RNA polymerase II transcription subunit 19-A-like	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        112220959 med19a; mediator of RNA polymerase II transcription subunit 19-A	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        112217902 med20; mediator of RNA polymerase II transcription subunit 20	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        112220109 med22; mediator of RNA polymerase II transcription subunit 22 isoform X1	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        112230763 mediator of RNA polymerase II transcription subunit 22 isoform X1	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        112225682 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        121844278 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        112266708 mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        112265054 mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        112229933 mediator of RNA polymerase II transcription subunit 30 isoform X1	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
E        112264885 mediator of RNA polymerase II transcription subunit 30	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
E        112264893 med30; mediator of RNA polymerase II transcription subunit 30	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        112223772 med1; mediator of RNA polymerase II transcription subunit 1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        112227905 zgc:111976; mediator of RNA polymerase II transcription subunit 1 isoform X1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        112239619 med4; mediator of RNA polymerase II transcription subunit 4	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        112225533 mediator of RNA polymerase II transcription subunit 4-like	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        112239107 mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        112221192 mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        112238925 mediator of RNA polymerase II transcription subunit 9	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        112223979 mediator of RNA polymerase II transcription subunit 9-like	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        112264515 med10; mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        112229582 mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        112217076 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        112264566 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        112228607 med31; mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        112242611 mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        112225331 med14; mediator of RNA polymerase II transcription subunit 14 isoform X1	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        112230944 mediator of RNA polymerase II transcription subunit 15 isoform X1	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        112220383 mediator of RNA polymerase II transcription subunit 15 isoform X1	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        112250723 med16; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 16	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
E        112252110 mediator of RNA polymerase II transcription subunit 16 isoform X1	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        112215406 cyclin-dependent kinase 8 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        112227711 cyclin-dependent kinase 8	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        112217537 cyclin-dependent kinase 19 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        112249853 cyclin-dependent kinase 19-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        112250399 cyclin-C isoform X3	K15161 CCNC; cyclin-C 
E        112217686 ccnc; cyclin-C isoform X1	K15161 CCNC; cyclin-C 
E        112256392 mediator of RNA polymerase II transcription subunit 12 isoform X2	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        112221102 med12; mediator of RNA polymerase II transcription subunit 12	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        112230985 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        112259123 med13a; mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        112267149 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        112241878 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        112265572 mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        112228588 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        112217567 med23; mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        112224100 mediator of RNA polymerase II transcription subunit 24 isoform X1	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        112258990 med25; mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        112250742 mediator of RNA polymerase II transcription subunit 26 isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        112260304 crsp7; mediator of RNA polymerase II transcription subunit 26 isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        112244611 mediator of RNA polymerase II transcription subunit 26 isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        112252138 mediator of RNA polymerase II transcription subunit 26 isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        112248223 mediator of RNA polymerase II transcription subunit 27 isoform X1	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        112263307 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        112258654 histone acetyltransferase KAT2A	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        112264391 histone acetyltransferase KAT2B isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        112225726 histone acetyltransferase KAT2A	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        112229447 histone acetyltransferase KAT2B isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        112224446 transformation/transcription domain-associated protein isoform X6	K08874 TRRAP; transformation/transcription domain-associated protein 
E        112246872 supt3h; transcription initiation protein SPT3 homolog	K11313 SUPT3H; transcription initiation protein SPT3 
E        112267087 transcriptional adapter 2-alpha	K11314 TADA2A; transcriptional adapter 2-alpha 
E        112265514 tada2a; LOW QUALITY PROTEIN: transcriptional adapter 2-alpha	K11314 TADA2A; transcriptional adapter 2-alpha 
E        112214822 transcriptional adapter 2-beta	K15127 TADA2B; transcriptional adapter 2-beta 
E        112260099 transcriptional adapter 2-beta	K15127 TADA2B; transcriptional adapter 2-beta 
E        112254412 transcriptional adapter 3	K11315 TADA3; transcriptional adapter 3 
E        112219424 transcriptional adapter 3	K11315 TADA3; transcriptional adapter 3 
E        112260690 tada1; transcriptional adapter 1 isoform X1	K11317 TADA1; transcriptional adapter 1 
E        112226752 transcriptional adapter 1 isoform X1	K11317 TADA1; transcriptional adapter 1 
E        112239762 taf2; transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        112218834 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112222179 transcription initiation factor TFIID subunit 4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112252637 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112215173 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112249605 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112219544 taf4a; transcription initiation factor TFIID subunit 4 isoform X3	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112237507 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112251288 taf4b; transcription initiation factor TFIID subunit 4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        112245857 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        112230250 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        112265247 taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        112222207 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        112216749 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        112260079 taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        112218355 taf6; transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        112256168 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        112228616 taf9; transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        112257786 transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        112221374 transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        112233049 taf10; transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        112234213 taf12; transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        112235444 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        112223829 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        112234855 ataxin-7-like protein 3 isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        112236348 LOW QUALITY PROTEIN: ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        112251331 SAGA-associated factor 29	K11364 SGF29; SAGA-associated factor 29 
E        112260534 SAGA-associated factor 29	K11364 SGF29; SAGA-associated factor 29 
E        112256428 supt7l; STAGA complex 65 subunit gamma isoform X1	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        112244819 atxn7l2a; LOW QUALITY PROTEIN: ataxin-7-like protein 2a	K11318 ATXN7; ataxin-7 
E        112254437 ataxin-7	K11318 ATXN7; ataxin-7 
E        112216870 atxn7l1; ataxin-7-like protein 1 isoform X1	K11318 ATXN7; ataxin-7 
E        112247238 ataxin-7	K11318 ATXN7; ataxin-7 
E        112215040 ataxin-7-like protein 1	K11318 ATXN7; ataxin-7 
E        112254900 ataxin-7-like protein 2	K11318 ATXN7; ataxin-7 
E        112219991 chd1; chromodomain-helicase-DNA-binding protein 1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        112222641 eny2; transcription and mRNA export factor ENY2-2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        112245150 transcription and mRNA export factor ENY2-2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        112224196 ubiquitin carboxyl-terminal hydrolase 22 isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        112223519 usp22; ubiquitin carboxyl-terminal hydrolase 22 isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        112239040 ubiquitin carboxyl-terminal hydrolase 22-like isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        112218509 sf3b3; splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        112230178 transcription activator BRG1 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        112234629 LOW QUALITY PROTEIN: transcription activator BRG1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        112235569 LOW QUALITY PROTEIN: probable global transcription activator SNF2L2	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        112248344 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        112220072 smarcb1b; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1b isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        112244701 SWI/SNF complex subunit SMARCC1 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        112255276 SWI/SNF complex subunit SMARCC2	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        112222931 SWI/SNF complex subunit SMARCC1 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        112264452 SWI/SNF complex subunit SMARCC1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        112217636 smarcc2; SWI/SNF complex subunit SMARCC2 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        112223828 smarcd2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        112215686 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        112246278 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        112227940 smarcd3b; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        112222062 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        112226111 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        112245668 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        112258779 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        112264388 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        112240903 LOW QUALITY PROTEIN: actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        112240902 actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        121844290 actin, cytoplasmic 1-like	K05692 ACTB_G1; actin beta/gamma 1 
E        112250615 actin-like protein 6A isoform X1	K11340 ACTL6A; actin-like protein 6A 
E        112251985 actin-like protein 6A	K11340 ACTL6A; actin-like protein 6A 
E        112223182 AT-rich interactive domain-containing protein 1A isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        112234455 AT-rich interactive domain-containing protein 1A isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        112262193 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        112217314 AT-rich interactive domain-containing protein 1B-like isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        112249993 AT-rich interactive domain-containing protein 1B isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        112233998 arid1ab; AT-rich interactive domain-containing protein 1A isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        112255745 AT-rich interactive domain-containing protein 1B-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        112265999 AT-rich interactive domain-containing protein 1A-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        112217078 AT-rich interactive domain-containing protein 2-like isoform X1	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        112264562 AT-rich interactive domain-containing protein 2-like isoform X1	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        112254830 protein polybromo-1 isoform X1	K11757 PBRM1; protein polybromo-1 
E        112214893 protein polybromo-1 isoform X1	K11757 PBRM1; protein polybromo-1 
E        112216992 LOW QUALITY PROTEIN: protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        112248344 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        112220072 smarcb1b; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1b isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        112257294 activated RNA polymerase II transcriptional coactivator p15	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        112219681 activated RNA polymerase II transcriptional coactivator p15	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        121847907 activated RNA polymerase II transcriptional coactivator p15-like isoform X1	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        112256347 ccar1; cell division cycle and apoptosis regulator protein 1 isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        112253192 cell division cycle and apoptosis regulator protein 1-like isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        112221724 calcoco1a; LOW QUALITY PROTEIN: calcium-binding and coiled-coil domain-containing protein 1	K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1 
E        112235472 calcium-binding and coiled-coil domain-containing protein 1-like isoform X1	K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        112237459 tcea1; transcription elongation factor A protein 1 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        112239594 tcea2; transcription elongation factor A protein 2	K03145 TFIIS; transcription elongation factor S-II 
E        112238193 transcription elongation factor A protein 2-like	K03145 TFIIS; transcription elongation factor S-II 
E        112223185 serine/arginine repetitive matrix protein 1 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        112240386 supt4h1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        112266794 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        112265151 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        112267080 transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
E        112265506 transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
E        112229018 transcription elongation factor SPT6 isoform X1	K11292 SUPT6H; transcription elongation factor SPT6 
E        112230695 supt6h; transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        112240820 ttf2; transcription termination factor 2 isoform X4	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        112216713 pcf11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        112264647 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        112229663 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        112217456 cpsf3; cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        112240642 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        121844242 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        112259017 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112248359 serine/threonine-protein phosphatase PP1-gamma catalytic subunit A	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112223856 ppp1cab; protein phosphatase 1, catalytic subunit, alpha isozyme b	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112260058 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112250506 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112258985 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112217890 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112214774 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112263044 serine/threonine-protein phosphatase PP1-gamma catalytic subunit A	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112231253 sympk; symplekin isoform X1	K06100 SYMPK; symplekin 
E        112218012 ssu72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        112254550 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        112250005 5'-3' exoribonuclease 2 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        112239955 dxo; decapping and exoribonuclease protein	K14845 RAI1; RAT1-interacting protein 
E        112244988 regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        112221979 regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        112264381 regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        112229460 regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        112229896 splicing factor, proline- and glutamine-rich	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        112264857 splicing factor, proline- and glutamine-rich isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        112261963 SR-related and CTD-associated factor 8 isoform X1	K13191 RBM16; RNA-binding protein 16 
E        112256575 SR-related and CTD-associated factor 8 isoform X1	K13191 RBM16; RNA-binding protein 16 
E        112266208 SR-related and CTD-associated factor 4	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        112267333 LOW QUALITY PROTEIN: SR-related and CTD-associated factor 4	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        112231463 scaf4a; SR-related and CTD-associated factor 4	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        112220096 setx; probable helicase senataxin isoform X1	K10706 SETX; senataxin [EC:5.6.2.-] 
E        112241809 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 isoform X1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        121845875 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like isoform X1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        112267118 RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        112265538 RNA polymerase II-associated factor 1 homolog isoform X1	K15174 PAF1; RNA polymerase II-associated factor 1 
E        112260211 parafibromin-like	K15175 CDC73; parafibromin 
E        112227159 cdc73; parafibromin	K15175 CDC73; parafibromin 
E        112249567 RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        112263671 RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        121844009 LOW QUALITY PROTEIN: RNA polymerase-associated protein LEO1-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        121844754 RNA polymerase-associated protein LEO1-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        112236401 RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        112262246 RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        112259899 negative elongation factor A isoform X1	K15179 WHSC2; negative elongation factor A 
E        112214616 negative elongation factor A	K15179 WHSC2; negative elongation factor A 
E        112232790 negative elongation factor B isoform X1	K15180 COBRA1; negative elongation factor B 
E        112263089 nelfb; negative elongation factor B	K15180 COBRA1; negative elongation factor B 
E        112216087 nelfcd; negative elongation factor C/D isoform X1	K15181 TH1L; negative elongation factor C/D 
E        112229943 negative elongation factor E	K15182 RDBP; negative elongation factor E 
E        112264904 negative elongation factor E isoform X1	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        112234332 RNA polymerase II elongation factor ELL	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112250982 RNA polymerase II elongation factor ELL isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112233765 RNA polymerase II elongation factor ELL2-like isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112245427 RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112218603 RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        121846813 ell2; RNA polymerase II elongation factor ELL2 isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112219622 AF4/FMR2 family member 1 isoform X1	K15184 AFF1; AF4/FMR2 family member 1 
E        112259488 AF4/FMR2 family member 1 isoform X1	K15184 AFF1; AF4/FMR2 family member 1 
E        112258119 AF4/FMR2 family member 4-like isoform X1	K15185 AFF4; AF4/FMR2 family member 4 
E        112228314 AF4/FMR2 family member 4	K15185 AFF4; AF4/FMR2 family member 4 
E        112222913 ELL-associated factor 1 isoform X1	K15186 EAF; ELL-associated factor 
E        112229003 eaf1; ELL-associated factor 1 isoform X1	K15186 EAF; ELL-associated factor 
E        112238640 ELL-associated factor 2	K15186 EAF; ELL-associated factor 
E        112225587 ELL-associated factor 2	K15186 EAF; ELL-associated factor 
E        112250935 protein ENL isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        112260002 mllt3; protein AF-9 isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        112241975 protein ENL isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        112214721 protein AF-9 isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        112221751 cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        112246716 cyclin-T2-like	K15188 CCNT; cyclin T 
E        112216331 cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        112216414 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        112225626 ccnt2a; cyclin-T2a isoform X1	K15188 CCNT; cyclin T 
E        112220036 cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        112234332 RNA polymerase II elongation factor ELL	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112250982 RNA polymerase II elongation factor ELL isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112233765 RNA polymerase II elongation factor ELL2-like isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112245427 RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112218603 RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        121846813 ell2; RNA polymerase II elongation factor ELL2 isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        112240495 uncharacterized protein LOC112240495 isoform X1	K26143 ICE1; little elongation complex subunit 1 
E        112255685 ice2; LOW QUALITY PROTEIN: little elongation complex subunit 2	K26144 ICE2; little elongation complex subunit 2 
D      Brd4/P-TEFb complex
E        112249716 bromodomain testis-specific protein isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        112235614 LOW QUALITY PROTEIN: bromodomain-containing protein 4	K11722 BRD4; bromodomain-containing protein 4 
E        112258444 brd4; LOW QUALITY PROTEIN: bromodomain-containing protein 4	K11722 BRD4; bromodomain-containing protein 4 
E        112241306 LOW QUALITY PROTEIN: bromodomain-containing protein 4-like	K11722 BRD4; bromodomain-containing protein 4 
E        112221751 cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        112246716 cyclin-T2-like	K15188 CCNT; cyclin T 
E        112216331 cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        112216414 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        112225626 ccnt2a; cyclin-T2a isoform X1	K15188 CCNT; cyclin T 
E        112220036 cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        112258616 protein HEXIM1	K15189 HEXIM1_2; protein HEXIM1/2 
E        112258618 protein HEXIM1	K15189 HEXIM1_2; protein HEXIM1/2 
E        112228864 7SK snRNA methylphosphate capping enzyme	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        112231275 mepcea; 7SK snRNA methylphosphate capping enzyme	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        112236430 mepceb; 7SK snRNA methylphosphate capping enzyme	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        112214735 larp7; la-related protein 7	K15191 LARP7; La-related protein 7 
E        112221751 cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        112246716 cyclin-T2-like	K15188 CCNT; cyclin T 
E        112216331 cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        112216414 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        112225626 ccnt2a; cyclin-T2a isoform X1	K15188 CCNT; cyclin T 
E        112220036 cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
E        112220224 ccar2; cell division cycle and apoptosis regulator protein 1	K25816 CCAR2; cell cycle and apoptosis regulator protein 2 
E        112227103 znf326; DBIRD complex subunit ZNF326	K13204 ZNF326; zinc finger protein 326 
D      Others
E        112228350 gtf2ird1; general transcription factor II-I repeat domain-containing protein 1	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        112258067 general transcription factor II-I repeat domain-containing protein 1-like isoform X1	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        112252834 TATA-binding protein-associated factor 172-like isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        112252970 TATA-binding protein-associated factor 172	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        112251190 dr1; protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        112249851 protein Dr1 isoform X1	K21751 DR1; down-regulator of transcription 1 
E        112260060 dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        112214778 dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        112218396 spty2d1; protein SPT2 homolog isoform X1	K15193 SPTY2D1; protein SPT2 
E        112220462 AF4/FMR2 family member 2-like	K15194 AFF2; AF4/FMR2 family member 2 
E        112257031 AF4/FMR2 family member 2	K15194 AFF2; AF4/FMR2 family member 2 
E        112225016 aff3; AF4/FMR2 family member 3 isoform X1	K15195 AFF3; AF4/FMR2 family member 3 
E        112224601 AF4/FMR2 family member 3-like isoform X1	K15195 AFF3; AF4/FMR2 family member 3 
E        112229667 RNA polymerase II subunit A C-terminal domain phosphatase	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        112264648 RNA polymerase II subunit A C-terminal domain phosphatase isoform X1	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        112225089 uncharacterized protein LOC112225089	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        112260927 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        112221747 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        112234881 uncharacterized protein LOC112234881 isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        112254729 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        112266335 LOW QUALITY PROTEIN: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        112216156 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        112216335 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        112216677 protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        112265005 LOW QUALITY PROTEIN: protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        112225201 csrnp3; cysteine/serine-rich nuclear protein 3	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112221522 csrnp2; cysteine/serine-rich nuclear protein 2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112237036 cysteine/serine-rich nuclear protein 2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112260934 cysteine/serine-rich nuclear protein 1	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112253724 cysteine/serine-rich nuclear protein 3 isoform X2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112236229 cysteine/serine-rich nuclear protein 3	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112267707 cysteine/serine-rich nuclear protein 3-like isoform X1	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112216257 cysteine/serine-rich nuclear protein 2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112227448 cysteine/serine-rich nuclear protein 1-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        112256527 rpap1; RNA polymerase II-associated protein 1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        112260270 rpap2; putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        112216974 RNA polymerase II-associated protein 3 isoform X3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        112214233 RNA polymerase II-associated protein 3 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        112223184 LOW QUALITY PROTEIN: GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        112234496 GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        112220371 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        112230931 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        112250105 gpn1; GPN-loop GTPase 1 isoform X1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        112259635 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        112218735 polr3b; DNA-directed RNA polymerase III subunit RPC2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        112253419 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        112254244 polr1c; DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        112237047 polr1d; DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        112235530 DNA-directed RNA polymerase III subunit RPC3 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        112248489 DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        112262912 DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        112240435 zgc:171971; DNA-directed RNA polymerase III subunit RPC4 isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        112258423 DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        112224390 DNA-directed RNA polymerase III subunit RPC5-like isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        112266253 polr3f; DNA-directed RNA polymerase III subunit RPC6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        112228602 DNA-directed RNA polymerase III subunit RPC7-like isoform X1	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        112229705 DNA-directed RNA polymerase III subunit RPC7-like isoform X1	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        112222847 polr3glb; RNA polymerase III subunit GL b isoform X1	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        112263401 polr3g; DNA-directed RNA polymerase III subunit RPC7 isoform X3	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        112264676 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        112226156 DNA-directed RNA polymerase III subunit RPC8 isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        112258804 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        112216709 DNA-directed RNA polymerase III subunit RPC9 isoform X1	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        112258728 DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
E        112226069 polr3k; DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        112260793 DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        112252226 polr2eb; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        112226160 DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        112258772 DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        112253288 polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        112236595 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        112247043 DNA-directed RNA polymerases I, II, and III subunit RPABC5 isoform X1	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        112263813 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        112259419 si:dkey-208k4.2; P43 5S RNA-binding protein-like	K09191 GTF3A; general transcription factor IIIA 
E        112227706 gtf3ab; general transcription factor IIIA, b	K09191 GTF3A; general transcription factor IIIA 
E        112231212 gtf3aa; transcription factor IIIA isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        112225830 P43 5S RNA-binding protein-like	K09191 GTF3A; general transcription factor IIIA 
E        112241223 zinc finger and SCAN domain-containing protein 2-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        112229987 oocyte zinc finger protein XlCOF22-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        112241256 zinc finger protein 239 isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        112230067 gastrula zinc finger protein XlCGF17.1-like	K09191 GTF3A; general transcription factor IIIA 
E        112255151 zinc finger protein 664-like	K09191 GTF3A; general transcription factor IIIA 
E        112241855 zinc finger protein 239-like	K09191 GTF3A; general transcription factor IIIA 
E        112239111 zinc finger protein 436-like	K09191 GTF3A; general transcription factor IIIA 
E        112242005 gastrula zinc finger protein XlCGF28.1-like isoform X4	K09191 GTF3A; general transcription factor IIIA 
E        112257884 zinc finger protein 664-like	K09191 GTF3A; general transcription factor IIIA 
E        112221285 zinc finger protein 883-like	K09191 GTF3A; general transcription factor IIIA 
E        112239592 zinc finger protein 883-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        112244733 gastrula zinc finger protein XlCGF17.1-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        112242338 tbpl1; LOW QUALITY PROTEIN: TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112259849 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112261587 tbpl2; TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112256862 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112224529 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112250431 brf1b; BRF1 RNA polymerase III transcription initiation factor subunit b	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        112246867 brf1a; BRF1 RNA polymerase III transcription initiation factor subunit a	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        112219433 brf2; transcription factor IIIB 50 kDa subunit	K15197 BRF2; transcription factor IIIB 50 kDa subunit 
E        112219715 mucin-5AC isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
E        112257253 transcription factor TFIIIB component B'' homolog	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        112238770 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        112246312 general transcription factor 3C polypeptide 2-like	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        112239301 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        112231047 general transcription factor 3C polypeptide 4-like isoform X1	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        112219360 general transcription factor 3C polypeptide 4 isoform X1	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        112233463 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        112230524 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        112218622 gtf3c6; general transcription factor 3C polypeptide 6	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        112233463 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        112230524 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        112239301 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        112250419 snRNA-activating protein complex subunit 1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        112261707 snapc1b; snRNA-activating protein complex subunit 1b	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        112214528 snapc2; snRNA-activating protein complex subunit 2	K15209 SNAPC2; snRNA-activating protein complex subunit 2 
E        112262368 snapc3; snRNA-activating protein complex subunit 3	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        112263303 snapc4; snRNA-activating protein complex subunit 4 isoform X2	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
E        112219171 snRNA-activating protein complex subunit 5	K15211 SNAPC5; snRNA-activating protein complex subunit 5 
E        112262035 snapc5; snRNA-activating protein complex subunit 5 isoform X1	K15211 SNAPC5; snRNA-activating protein complex subunit 5 
D      Octamer transcription factors
E        112242335 POU domain, class 2, transcription factor 1 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        112258059 POU domain, class 2, transcription factor 3-like isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        112235815 POU domain, class 2, transcription factor 2 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        112243600 POU domain, class 2, transcription factor 1 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        112225343 pou2f1b; POU domain, class 2, transcription factor 1 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        112266025 POU domain, class 2, transcription factor 2-like	K09364 POU2F; POU domain transcription factor, class 2 
E        112228370 pou2f3; POU domain, class 2, transcription factor 3	K09364 POU2F; POU domain transcription factor, class 2 
E        112229349 LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 2	K09364 POU2F; POU domain transcription factor, class 2 
E        112239098 pou2f2a; POU domain, class 2, transcription factor 2 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        112234371 pou5f3; POU domain, class 5, transcription factor 1	K09367 POU5F; POU domain transcription factor, class 5 
E        112220339 POU domain, class 5, transcription factor 1-like isoform X1	K09367 POU5F; POU domain transcription factor, class 5 
D      Others
E        112255316 znf76; zinc finger protein 76	K20828 ZNF143_76; zinc finger protein 143/76 
E        112263835 zinc finger protein 143 isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        112249315 zinc finger protein 143 isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        112218333 znf143b; zinc finger protein 143	K20828 ZNF143_76; zinc finger protein 143/76 
E        112228018 maf1b; repressor of RNA polymerase III transcription MAF1 homolog isoform X2	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
E        112215722 repressor of RNA polymerase III transcription MAF1 homolog isoform X1	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
E        112215624 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
E        112254762 repressor of RNA polymerase III transcription MAF1 homolog isoform X1	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        112255999 polr1a; DNA-directed RNA polymerase I subunit RPA1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        112252827 polr1b; DNA-directed RNA polymerase I subunit RPA2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        112253419 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        112254244 polr1c; DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        112237047 polr1d; DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        112241152 DNA-directed RNA polymerase I subunit RPA49 isoform X1	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        121843834 DNA-directed RNA polymerase I subunit RPA49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        121844102 LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        112229426 polr1f; DNA-directed RNA polymerase I subunit RPA43	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        112266780 DNA-directed RNA polymerase I subunit RPA34	K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34 
E        112265128 DNA-directed RNA polymerase I subunit RPA34	K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34 
E        112264311 polr1h; DNA-directed RNA polymerase I subunit RPA12	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        112260793 DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        112252226 polr2eb; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        112226160 DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        112258772 DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        112253288 polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        112236595 polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        112247043 DNA-directed RNA polymerases I, II, and III subunit RPABC5 isoform X1	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        112263813 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        112242338 tbpl1; LOW QUALITY PROTEIN: TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112259849 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112261587 tbpl2; TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112256862 TATA-box-binding protein-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112224529 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        112217440 taf1a; TATA box-binding protein-associated factor RNA polymerase I subunit A	K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A 
E        112217459 taf1b; TATA box-binding protein-associated factor RNA polymerase I subunit B	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
E        112257321 taf1c; TATA box-binding protein-associated factor, RNA polymerase I, subunit C	K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C 
C    Other transcription-related factors
D      UBF
E        112227247 ubtfl; LOW QUALITY PROTEIN: upstream binding transcription factor, like	K09273 UBTF; upstream-binding transcription factor 
E        112236343 LOW QUALITY PROTEIN: nucleolar transcription factor 1	K09273 UBTF; upstream-binding transcription factor 
E        112223830 nucleolar transcription factor 1	K09273 UBTF; upstream-binding transcription factor 
E        112234854 LOW QUALITY PROTEIN: nucleolar transcription factor 1-like	K09273 UBTF; upstream-binding transcription factor 
E        112260154 nucleolar transcription factor 1-A isoform X1	K09273 UBTF; upstream-binding transcription factor 
E        121847264 nucleolar transcription factor 1-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        112259268 rrn3; LOW QUALITY PROTEIN: RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        112240386 supt4h1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        112266794 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        112265151 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        112234714 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        121841821 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        112221560 bromodomain adjacent to zinc finger domain protein 2A isoform X1	K15224 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A 
E        112215789 baz2a; bromodomain adjacent to zinc finger domain protein 2A isoform X1	K15224 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A 
D      CTDK-I complex
D      Transcription termination factors
E        112236982 transcription termination factor 1	K15225 TTF1; transcription termination factor 1 
E        112246983 transcription termination factor 1 isoform X1	K15225 TTF1; transcription termination factor 1 
E        112223784 caveolae-associated protein 1	K19387 PTRF; polymerase I and transcript release factor 
E        112258661 caveolae-associated protein 1	K19387 PTRF; polymerase I and transcript release factor 
E        112225990 cavin1a; caveolae-associated protein 1	K19387 PTRF; polymerase I and transcript release factor 
D      Others
E        112237306 nucleolar and coiled-body phosphoprotein 1	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
E        112223343 LOW QUALITY PROTEIN: nucleolar protein dao-5-like	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        112260274 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        112227105 gtf2b; transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        112225254 gtf2e1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#<hr>
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#Last updated: April 9, 2024