+D GENES KO
#
KEGG Orthology (KO) - Pseudomonas aeruginosa DK2
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pdk00010]
D PADK2_08365 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PADK2_25130 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PADK2_27045 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PADK2_02800 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PADK2_25210 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PADK2_08355 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PADK2_09340 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PADK2_02785 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PADK2_27150 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PADK2_06165 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PADK2_22560 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PADK2_18230 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PADK2_16830 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PADK2_26570 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PADK2_26575 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_06195 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PADK2_28870 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PADK2_13900 putative alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PADK2_15740 quinoprotein alcohol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D PADK2_13945 putative cytochrome c precursor K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_15730 putative aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PADK2_04215 putative aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PADK2_12455 putative AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_25135 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_21265 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_26380 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PADK2_20610 pimeloyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PADK2_28345 phosphomannomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PADK2_28845 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PADK2_13655 putative glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
C 00020 Citrate cycle (TCA cycle) [PATH:pdk00020]
D PADK2_17805 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PADK2_17905 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PADK2_16745 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PADK2_11540 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PADK2_11545 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PADK2_17780 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PADK2_17775 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17760 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PADK2_17765 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PADK2_28970 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PADK2_17790 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PADK2_17785 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PADK2_17800 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PADK2_17795 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PADK2_22580 putative fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PADK2_23280 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PADK2_21435 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PADK2_07000 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PADK2_24655 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PADK2_28915 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D PADK2_28910 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D PADK2_26570 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PADK2_26575 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pdk00030]
D PADK2_25130 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PADK2_08420 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PADK2_28935 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PADK2_08425 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PADK2_03650 putative 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PADK2_03060 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PADK2_02765 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PADK2_10435 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PADK2_01650 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PADK2_15905 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PADK2_28345 phosphomannomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PADK2_07405 ATP-binding component of phosphonate transport K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D PADK2_24805 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PADK2_08360 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D PADK2_08430 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PADK2_08675 putative aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PADK2_13655 putative glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D PADK2_13825 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D PADK2_13950 gluconate dehydrogenase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D PADK2_13955 hypothetical protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D PADK2_04845 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PADK2_13970 putative 2-ketogluconate kinase K11441 kguK; dehydrogluconokinase [EC:2.7.1.13]
D PADK2_13960 2-hydroxyacid dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]
D PADK2_13670 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D PADK2_18225 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PADK2_21460 thioredoxin reductase K22345 E4.3.1.9; glucosaminate ammonia-lyase [EC:4.3.1.9]
D PADK2_02800 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PADK2_27045 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:pdk00040]
D PADK2_14125 hypothetical protein K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D PADK2_06570 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PADK2_15535 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PADK2_15530 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PADK2_03060 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PADK2_13555 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PADK2_19385 putative semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PADK2_14570 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PADK2_01105 class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pdk00051]
D PADK2_13550 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PADK2_06610 phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_14105 putative phosphomannose isomerase/GDP-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_29005 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_28345 phosphomannomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PADK2_29010 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PADK2_01105 class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PADK2_27045 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PADK2_06560 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PADK2_13560 mannitol dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67]
D PADK2_06665 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D PADK2_06660 alginate biosynthesis protein Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D PADK2_06655 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D PADK2_06640 alginate-c5-mannuronan-epimerase AlgG K01795 algG; mannuronan 5-epimerase [EC:5.1.3.37]
D PADK2_06630 algL; poly(beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D PADK2_02800 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PADK2_25210 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PADK2_29015 oxidoreductase Rmd K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D PADK2_06565 phosphotransferase system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:pdk00052]
D PADK2_03985 putative epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PADK2_15530 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PADK2_28345 phosphomannomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PADK2_08365 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism [PATH:pdk00053]
D PADK2_06570 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PADK2_15535 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_14580 putative enzyme K25260 lxyD; L-lyxonate dehydratase [EC:4.2.1.176]
D PADK2_19385 putative semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PADK2_14570 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:pdk00500]
D PADK2_15530 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PADK2_17065 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PADK2_14840 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PADK2_14900 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PADK2_14945 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PADK2_14905 putative trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D PADK2_14850 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PADK2_14910 hypothetical protein K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D PADK2_14865 putative glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68]
D PADK2_14855 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D PADK2_14845 putative glycosyl hydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D PADK2_13190 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D PADK2_28345 phosphomannomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PADK2_08365 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PADK2_25130 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PADK2_13550 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pdk00520]
D PADK2_13770 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D PADK2_09320 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PADK2_05530 putative phosphotransferase system protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PADK2_05545 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PADK2_13550 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PADK2_05540 putative aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PADK2_29485 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PADK2_25215 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PADK2_29500 glucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PADK2_03255 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PADK2_08475 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D PADK2_03005 putative phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PADK2_03010 putative nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D PADK2_23180 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PADK2_09470 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PADK2_08545 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PADK2_08550 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PADK2_06595 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D PADK2_06605 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D PADK2_06600 putative glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D PADK2_06590 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D PADK2_08365 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PADK2_28345 phosphomannomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PADK2_15530 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PADK2_06570 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PADK2_15535 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PADK2_03985 putative epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PADK2_25130 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PADK2_06610 phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_14105 putative phosphomannose isomerase/GDP-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_29005 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_29010 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PADK2_29015 oxidoreductase Rmd K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D PADK2_06665 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D PADK2_27705 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:pdk00620]
D PADK2_12455 putative AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_25135 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_21265 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_26570 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PADK2_26575 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_28870 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PADK2_06195 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PADK2_13900 putative alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PADK2_15740 quinoprotein alcohol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D PADK2_13945 putative cytochrome c precursor K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D PADK2_21530 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D PADK2_21535 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PADK2_22560 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PADK2_18230 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PADK2_06145 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PADK2_25720 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PADK2_02480 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PADK2_02485 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PADK2_25725 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PADK2_08775 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PADK2_20920 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_15730 putative aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PADK2_04215 putative aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PADK2_28970 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PADK2_26380 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PADK2_20610 pimeloyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PADK2_13355 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D PADK2_25325 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D PADK2_15145 thiamine pyrophosphate protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PADK2_28220 pyruvate dehydrogenase (cytochrome) K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PADK2_21070 D-lactate dehydrogenase (fermentative) K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PADK2_25330 ferredoxin K18930 dld; D-lactate dehydrogenase
D PADK2_06745 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PADK2_22085 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PADK2_27050 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PADK2_16600 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PADK2_21550 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PADK2_19995 chaperone protein HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D PADK2_04845 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PADK2_06905 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PADK2_26725 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PADK2_25850 carboxyphosphonoenolpyruvate phosphonomutase K01003 bcpA; oxaloacetate decarboxylase [EC:4.1.1.112]
D PADK2_28915 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D PADK2_28910 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D PADK2_07000 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PADK2_24655 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PADK2_22580 putative fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PADK2_23280 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PADK2_21435 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PADK2_05905 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PADK2_16830 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PADK2_02425 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_05365 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pdk00630]
D PADK2_11490 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D PADK2_12455 putative AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_25135 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_21265 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_02425 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PADK2_17805 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PADK2_17905 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PADK2_16745 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_07775 (R)-specific enoyl-CoA hydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D PADK2_28510 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D PADK2_28505 glcE; glycolate oxidase FAD binding subunit K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D PADK2_28500 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D PADK2_03490 catalase K03781 katE; catalase [EC:1.11.1.6]
D PADK2_14930 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6]
D PADK2_24500 catalase K03781 katE; catalase [EC:1.11.1.6]
D PADK2_04845 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PADK2_24575 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PADK2_00345 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PADK2_03065 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PADK2_09485 putative hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PADK2_01470 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_01480 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_07490 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_15450 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_17885 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_27090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29350 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_12995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_24445 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_12990 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PADK2_27585 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PADK2_13005 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PADK2_27595 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_12985 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PADK2_27590 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PADK2_25455 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PADK2_18210 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D PADK2_18215 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D PADK2_18220 putative oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D PADK2_20425 Putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PADK2_18225 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PADK2_08430 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PADK2_08675 putative aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PADK2_25535 formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PADK2_25540 Twin-arginine translocation pathway signal K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PADK2_25530 formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PADK2_25525 nitrate-inducible formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PADK2_15245 kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D PADK2_22485 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PADK2_28835 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PADK2_26950 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:pdk00640]
D PADK2_12455 putative AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_25135 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_21265 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_06510 putative acetyl-coa synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PADK2_26380 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PADK2_20610 pimeloyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PADK2_21530 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D PADK2_21535 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PADK2_14040 2-oxoisovalerate dehydrogenase (alpha subunit) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PADK2_07175 putative pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PADK2_14035 2-oxoisovalerate dehydrogenase (beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PADK2_07180 putative pyruvate dehydrogenase E1 component, beta chain K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PADK2_14030 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PADK2_07185 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_12470 putative acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PADK2_16500 putative oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_06145 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PADK2_25720 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PADK2_02480 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PADK2_02485 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PADK2_25725 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PADK2_08775 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PADK2_00675 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PADK2_28300 omega amino acid--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PADK2_17765 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PADK2_17760 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PADK2_00665 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_06500 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_21965 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_21705 methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PADK2_21720 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D PADK2_21710 aconitate hydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D PADK2_21715 hypothetical protein K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D PADK2_16745 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PADK2_21700 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:pdk00650]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_06390 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PADK2_17570 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_12470 putative acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PADK2_09605 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PADK2_07775 (R)-specific enoyl-CoA hydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D PADK2_26775 poly(R)-hydroxyalkanoic acid synthase, class II K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PADK2_26785 poly(R)-hydroxyalkanoic acid synthase, class II K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PADK2_01115 putative CoA transferase, subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D PADK2_01120 putative CoA transferase, subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D PADK2_17790 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PADK2_17785 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PADK2_17800 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PADK2_17795 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PADK2_01320 4-aminobutyrate aminotransferase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D PADK2_01315 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PADK2_28970 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PADK2_15595 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PADK2_15655 putative CoA transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PADK2_15650 putative CoA transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PADK2_15665 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D PADK2_15635 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D PADK2_24945 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_18625 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_15470 thiamine pyrophosphate protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_24940 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PADK2_03840 putative alcohol dehydrogenase (Zn-dependent) K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:pdk00660]
D PADK2_24945 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_18625 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_15470 thiamine pyrophosphate protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_24940 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PADK2_21290 hypothetical protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D PADK2_17765 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PADK2_17760 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PADK2_21310 hypothetical protein K18291 ich-P; itaconyl-CoA hydratase / mesaconyl-C4 CoA hydratase [EC:4.2.1.56 4.2.1.-]
D PADK2_21285 putative acyl-CoA lyase beta chain K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D PADK2_08730 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PADK2_08735 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PADK2_08745 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pdk00562]
D PADK2_07675 non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D PADK2_21485 hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D PADK2_05235 extragenic suppressor protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PADK2_00665 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_06500 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_21965 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_25210 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pdk00190]
D PADK2_11475 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PADK2_16235 putative NADH-ubiquinone/plastoquinone oxidoreductase K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PADK2_11470 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PADK2_11465 bifunctional NADH:ubiquinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D PADK2_11460 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PADK2_11455 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PADK2_11450 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PADK2_11445 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PADK2_11440 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PADK2_11435 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PADK2_11430 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PADK2_11425 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PADK2_11420 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PADK2_11415 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PADK2_11195 hypothetical protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PADK2_23640 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PADK2_17790 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PADK2_17785 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PADK2_17800 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PADK2_17795 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PADK2_23085 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PADK2_23080 putative cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PADK2_23075 putative cytochrome c1 precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PADK2_00580 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PADK2_19035 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PADK2_19040 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PADK2_00555 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PADK2_00545 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PADK2_00540 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PADK2_00550 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PADK2_00575 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PADK2_16375 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PADK2_17925 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PADK2_17945 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PADK2_17930 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PADK2_17950 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PADK2_17935 putative cytochrome c oxidase subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PADK2_17955 putative cytochrome c oxidase subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PADK2_17940 putative cytochrome c K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PADK2_17960 putative cytochrome c K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PADK2_19045 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PADK2_19050 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D PADK2_19055 cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PADK2_04675 cyanide insensitive terminal oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PADK2_04680 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PADK2_02605 cytochrome c-551 precursor K08738 CYC; cytochrome c
D PADK2_29520 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PADK2_29510 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PADK2_29515 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PADK2_29525 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PADK2_29505 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PADK2_29540 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PADK2_29530 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PADK2_29535 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PADK2_04170 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PADK2_27735 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PADK2_13075 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PADK2_00715 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pdk00680]
D PADK2_28840 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D PADK2_06195 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PADK2_06200 putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PADK2_25535 formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PADK2_25540 Twin-arginine translocation pathway signal K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PADK2_25530 formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PADK2_25525 nitrate-inducible formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PADK2_12995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_24445 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_24575 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PADK2_18225 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PADK2_06165 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PADK2_05905 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PADK2_02800 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PADK2_27045 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PADK2_21530 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D PADK2_21535 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PADK2_12455 putative AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_25135 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_21265 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_16830 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PADK2_27150 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PADK2_01575 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PADK2_08500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PADK2_26290 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PADK2_16900 thrH; phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:pdk00910]
D PADK2_04950 nitrite extrusion protein 1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PADK2_04955 nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PADK2_16765 nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PADK2_04960 respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_04965 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_04975 respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_19775 nitrate reductase catalytic subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D PADK2_19780 cytochrome c-type protein NapB precursor K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D PADK2_16785 assimilatory nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D PADK2_16775 assimilatory nitrite reductase large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D PADK2_16780 assimilatory nitrite reductase small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D PADK2_02610 nitrite reductase precursor K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D PADK2_02635 nitric-oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D PADK2_02630 nitric-oxide reductase subunit C K02305 norC; nitric oxide reductase subunit C
D PADK2_07310 nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D PADK2_03225 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PADK2_03660 hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PADK2_08995 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PADK2_24370 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PADK2_01470 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_01480 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_07490 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_15450 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_17885 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_27090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29350 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_26675 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PADK2_26670 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PADK2_15385 cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D PADK2_27370 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PADK2_00530 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PADK2_24840 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PADK2_15380 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pdk00920]
D PADK2_18255 sulfate-binding protein of ABC transporter K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PADK2_01405 sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PADK2_01400 sulfate transport protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PADK2_01395 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PADK2_01390 sulfate transport protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PADK2_04635 putative periplasmic taurine-binding protein precursor K15551 tauA; taurine transport system substrate-binding protein
D PADK2_04645 putative permease of ABC taurine transporter K15552 tauC; taurine transport system permease protein
D PADK2_04640 putative ATP-binding component of ABC taurine transporter K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PADK2_04650 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D PADK2_07015 putative sulfonate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_07035 putative ABC-type transporter periplasmic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11680 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11685 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11690 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_00935 sulfate ester transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11665 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_13725 putative ABC transporter, periplasmic binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_13790 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_07020 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_07045 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PADK2_00930 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_13735 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_13795 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_00925 ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_07025 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_07050 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_13730 putative ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_13800 ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_11660 putative flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PADK2_11670 putative lavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PADK2_07040 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PADK2_13490 methanesulfonate sulfonatase MsuD K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PADK2_13485 NADH-dependent FMN reductase MsuE K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PADK2_07030 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PADK2_23140 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PADK2_23145 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PADK2_27385 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PADK2_16905 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PADK2_23495 oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D PADK2_16475 sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PADK2_13545 putative transmembrane protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D PADK2_26270 thiosulfate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PADK2_19180 putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PADK2_02970 glpE; thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D PADK2_05245 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PADK2_11105 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PADK2_20375 putative cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PADK2_01960 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PADK2_08800 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PADK2_04555 putative Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
D PADK2_03680 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D PADK2_19225 putative acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PADK2_02550 putative acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PADK2_27450 putative acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PADK2_03675 putative acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PADK2_02555 acyl-CoA dehydrogenase domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PADK2_02545 acyl-CoA dehydrogenase domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pdk00061]
D PADK2_06145 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PADK2_25720 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PADK2_02480 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PADK2_02485 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PADK2_25725 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PADK2_08775 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PADK2_07600 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PADK2_09525 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PADK2_16305 acyl carrier protein K02078 acpP; acyl carrier protein
D PADK2_09515 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PADK2_07605 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PADK2_27380 putative beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D PADK2_00510 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PADK2_17665 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PADK2_09530 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PADK2_18795 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PADK2_00915 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_03880 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_09520 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_25405 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_18375 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_22870 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_29360 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_17660 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PADK2_06115 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PADK2_16635 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PADK2_09605 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PADK2_07785 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_07790 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_17625 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pdk00071]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_09280 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_09660 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_06990 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_12470 putative acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PADK2_12480 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_18045 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_21305 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_26465 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_26385 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_19705 putative acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D PADK2_23105 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D PADK2_10340 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PADK2_02245 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PADK2_07785 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_07790 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_17625 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_12360 alkane-1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PADK2_18100 alkane-1-monooxygenase 2 K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PADK2_28480 putative rubredoxin reductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D PADK2_06195 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PADK2_28870 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pdk00561]
D PADK2_20425 Putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PADK2_18225 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_13900 putative alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PADK2_06430 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PADK2_06445 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PADK2_18285 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PADK2_05975 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PADK2_09510 putative phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PADK2_02930 putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PADK2_00025 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PADK2_06325 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PADK2_10065 lactonizing lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D PADK2_25545 lipase LipC K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:pdk00564]
D PADK2_17640 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PADK2_09220 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PADK2_06420 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PADK2_18275 putative oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PADK2_05975 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PADK2_02930 putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PADK2_00025 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PADK2_06325 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PADK2_07675 non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D PADK2_21485 hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D PADK2_01740 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PADK2_09400 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PADK2_13510 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PADK2_25435 putative glycerolphosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PADK2_04205 ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D PADK2_04200 ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D PADK2_06085 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PADK2_12560 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PADK2_05030 phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D PADK2_24930 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PADK2_26275 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PADK2_11740 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PADK2_12535 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PADK2_04075 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D PADK2_29475 hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D PADK2_28705 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PADK2_14890 cardiolipin synthase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PADK2_22610 putative phospholipase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PADK2_28285 putative cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:pdk00565]
D PADK2_09215 hypothetical protein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D PADK2_07675 non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D PADK2_21485 hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:pdk00600]
D PADK2_21480 alkaline ceramidase K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
C 00590 Arachidonic acid metabolism
D PADK2_19800 putative lipoxygenase K19246 loxA; arachidonate 15-lipoxygenase [EC:1.13.11.33]
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:pdk00592]
D PADK2_09280 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_09660 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_06990 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pdk01040]
D PADK2_01420 delta-9 fatty acid desaturase, DesA K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PADK2_25930 hypothetical protein K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D PADK2_25935 putative oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D PADK2_10095 acyl-CoA thioesterase I precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PADK2_04615 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PADK2_28590 putative long-chain acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pdk00230]
D PADK2_26345 adenosine diphosphate sugar pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PADK2_27390 nudE; adenosine nucleotide hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D PADK2_28345 phosphomannomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PADK2_24805 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PADK2_08795 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PADK2_25760 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PADK2_20975 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PADK2_05580 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PADK2_05520 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PADK2_20970 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PADK2_28860 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PADK2_28865 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PADK2_20675 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PADK2_06780 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PADK2_11515 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PADK2_06785 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PADK2_25755 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PADK2_18005 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PADK2_06215 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PADK2_27395 putative hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D PADK2_17840 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PADK2_24140 multicopper polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PADK2_18380 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PADK2_24680 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PADK2_05480 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PADK2_05290 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PADK2_01945 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PADK2_28020 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PADK2_28225 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PADK2_18105 xanthine dehydrogenase K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D PADK2_05485 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PADK2_18115 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PADK2_00685 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PADK2_12750 deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PADK2_28415 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PADK2_19865 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PADK2_29225 NrdJa K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PADK2_19870 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PADK2_16035 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PADK2_09130 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D PADK2_20050 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PADK2_28425 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PADK2_27730 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PADK2_21035 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D PADK2_08240 CyaB K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PADK2_27890 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D PADK2_26180 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PADK2_28025 adenosine deaminase (add) K01488 add; adenosine deaminase [EC:3.5.4.4]
D PADK2_04470 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PADK2_03740 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PADK2_00750 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D PADK2_05910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PADK2_21030 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PADK2_26335 putative phosphohydrolase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PADK2_02975 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D PADK2_23140 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PADK2_23145 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PADK2_18130 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D PADK2_18140 hypothetical protein K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D PADK2_18135 putative polysaccharide deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5]
D PADK2_18145 allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D PADK2_19970 hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D PADK2_18150 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D PADK2_25830 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PADK2_25825 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PADK2_25815 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PADK2_27370 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pdk00240]
D PADK2_25250 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PADK2_25260 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PADK2_02025 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PADK2_06730 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PADK2_02020 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PADK2_29445 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PADK2_09090 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PADK2_28390 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PADK2_09995 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PADK2_06070 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PADK2_05290 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PADK2_21030 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PADK2_23320 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PADK2_02825 putative metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D PADK2_06155 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PADK2_08520 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PADK2_06215 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PADK2_17840 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PADK2_24685 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PADK2_02030 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PADK2_03740 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PADK2_02205 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PADK2_16035 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PADK2_06860 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PADK2_19865 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PADK2_29225 NrdJa K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PADK2_19870 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PADK2_09545 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PADK2_28340 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PADK2_01715 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PADK2_02220 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PADK2_02215 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PADK2_02225 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PADK2_02235 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pdk00250]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_21890 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PADK2_14010 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PADK2_18955 glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D PADK2_00280 putative phenazine-modifying enzyme K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PADK2_06965 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PADK2_15230 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PADK2_05340 putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PADK2_10235 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PADK2_28880 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PADK2_06740 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PADK2_27845 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PADK2_26180 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PADK2_06780 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PADK2_11515 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PADK2_06785 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PADK2_02025 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PADK2_01320 4-aminobutyrate aminotransferase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D PADK2_01315 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PADK2_26675 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PADK2_26670 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PADK2_08995 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PADK2_24370 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PADK2_21780 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PADK2_01470 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_01480 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_07490 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_15450 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_17885 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_27090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29350 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_25250 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PADK2_25260 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PADK2_17520 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PADK2_05540 putative aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PADK2_29485 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PADK2_08795 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pdk00260]
D PADK2_21180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PADK2_08750 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PADK2_05655 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PADK2_29215 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D PADK2_16900 thrH; phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D PADK2_05660 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PADK2_21190 putative threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PADK2_28805 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PADK2_12995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_24445 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_24575 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PADK2_04845 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PADK2_20425 Putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PADK2_18225 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PADK2_27150 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PADK2_01575 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PADK2_08500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PADK2_26290 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PADK2_02120 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PADK2_12990 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PADK2_27585 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PADK2_13005 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PADK2_27595 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_12985 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PADK2_27590 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PADK2_25455 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PADK2_24930 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PADK2_28595 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PADK2_28600 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PADK2_28790 putative ring hydroxylating dioxygenase, alpha-subunit K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D PADK2_28795 putative ferredoxin K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D PADK2_28725 putative FMN oxidoreductase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D PADK2_28730 putative ferredoxin K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D PADK2_28735 electron transfer flavoprotein, alpha subunit K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D PADK2_28740 putative electron transfer flavoprotein, beta subunit K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D PADK2_28825 sarcosine oxidase, subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D PADK2_28815 sarcosine oxidase, subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D PADK2_28830 sarcosine oxidase gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D PADK2_28820 sarcosine oxidase delta subunit K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D PADK2_02010 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PADK2_02015 putative cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PADK2_13000 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PADK2_28630 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PADK2_01655 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PADK2_19010 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PADK2_21450 hypothetical protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PADK2_07485 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PADK2_00180 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PADK2_00185 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PADK2_13205 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:pdk00270]
D PADK2_05245 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PADK2_11105 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PADK2_20375 putative cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PADK2_02015 putative cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PADK2_02010 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PADK2_16440 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PADK2_16000 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PADK2_02755 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PADK2_03195 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PADK2_25335 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PADK2_25340 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PADK2_17265 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PADK2_18565 acyl-homoserine-lactone synthase K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PADK2_06880 autoinducer synthesis protein RhlI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PADK2_24140 multicopper polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PADK2_18380 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PADK2_08485 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PADK2_09325 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D PADK2_08490 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D PADK2_17290 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D PADK2_17280 enolase-phosphatase E-1 K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D PADK2_17285 putative oxidase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D PADK2_08635 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PADK2_10265 putative GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PADK2_02180 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PADK2_08885 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D PADK2_21180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PADK2_08750 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PADK2_05655 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PADK2_01960 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PADK2_26620 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PADK2_08800 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PADK2_26560 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PADK2_27535 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PADK2_02050 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_26270 thiosulfate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PADK2_19180 putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PADK2_13000 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PADK2_28630 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PADK2_21045 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D PADK2_01575 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PADK2_08500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pdk00280]
D PADK2_26560 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PADK2_07170 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PADK2_14040 2-oxoisovalerate dehydrogenase (alpha subunit) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PADK2_07175 putative pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PADK2_14035 2-oxoisovalerate dehydrogenase (beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PADK2_07180 putative pyruvate dehydrogenase E1 component, beta chain K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PADK2_14030 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PADK2_07185 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_12470 putative acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PADK2_12480 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_18045 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_21305 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_26465 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_26385 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PADK2_15575 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_09280 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_09660 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_06990 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_06505 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PADK2_00665 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_06500 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_21965 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_00675 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PADK2_28300 omega amino acid--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PADK2_15590 3-methylcrotonyl-CoA carboxylase alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D PADK2_15580 methylcrotonyl-CoA carboxylase, beta-subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D PADK2_15585 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D PADK2_15595 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PADK2_15655 putative CoA transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PADK2_15650 putative CoA transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PADK2_15665 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pdk00290]
D PADK2_01655 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PADK2_19010 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PADK2_21450 hypothetical protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PADK2_08730 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PADK2_08735 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PADK2_08745 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PADK2_24945 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_18625 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_15470 thiamine pyrophosphate protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_24940 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PADK2_24935 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PADK2_01770 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PADK2_26560 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PADK2_07170 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PADK2_10235 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PADK2_05365 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pdk00300]
D PADK2_05655 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PADK2_21180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PADK2_08750 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PADK2_01100 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PADK2_03730 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PADK2_16215 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PADK2_20690 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PADK2_25265 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PADK2_06010 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PADK2_02675 putative class III pyridoxal phosphate-dependent aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PADK2_06045 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D PADK2_19835 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PADK2_27925 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PADK2_27920 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PADK2_17435 putative aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PADK2_23015 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PADK2_23010 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pdk00310]
D PADK2_20550 putative aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D PADK2_17775 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_02245 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_01320 4-aminobutyrate aminotransferase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D PADK2_01315 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PADK2_02240 hypothetical protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D PADK2_19390 putative L-malate dehydrogenase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
D PADK2_20545 oxidoreductase K26065 amaA; L-pipecolate oxidase
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pdk00220]
D PADK2_06680 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PADK2_27365 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PADK2_06740 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PADK2_27845 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PADK2_02490 hypothetical protein K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D PADK2_25830 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PADK2_25825 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PADK2_25815 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D PADK2_27360 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PADK2_17520 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PADK2_18955 glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D PADK2_01470 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_01480 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_07490 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_15450 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_17885 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_27090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29350 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_08995 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PADK2_24370 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PADK2_27370 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_10235 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PADK2_27540 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D PADK2_22940 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PADK2_23620 putative acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D PADK2_28350 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PADK2_03235 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PADK2_02675 putative class III pyridoxal phosphate-dependent aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PADK2_27550 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D PADK2_28685 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pdk00330]
D PADK2_02205 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PADK2_16575 putative Orn/Arg/Lys decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D PADK2_25680 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PADK2_01450 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PADK2_01455 N-carbamoylputrescine amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PADK2_23525 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PADK2_25340 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PADK2_17265 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PADK2_03195 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PADK2_25335 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PADK2_01485 putative aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PADK2_01090 putative aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PADK2_05775 spermidine dehydrogenase, SpdH K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_28295 putative aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D PADK2_03745 spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D PADK2_02120 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PADK2_26370 Arginine:Pyruvate Transaminase, AruH K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D PADK2_26375 hypothetical protein K12253 aruI; 5-guanidino-2-oxopentanoate decarboxylase [EC:4.1.1.75]
D PADK2_18605 guanidinobutyrase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D PADK2_07440 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22125 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22625 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_21215 arginine/ornithine succinyltransferase AII subunit K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PADK2_21220 arginine/ornithine succinyltransferase AI subunit K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PADK2_21205 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D PADK2_21225 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D PADK2_21210 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D PADK2_21195 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D PADK2_13685 putative oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PADK2_10555 putative oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PADK2_28280 putative oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PADK2_17890 putative oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PADK2_01080 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D PADK2_03725 putative aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D PADK2_01980 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PADK2_21780 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PADK2_24255 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PADK2_04290 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PADK2_26895 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_19375 proline racemase K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77]
D PADK2_19355 hypothetical protein K09123 lhpI; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171]
C 00340 Histidine metabolism [PATH:pdk00340]
D PADK2_23175 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PADK2_26185 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D PADK2_26830 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PADK2_26825 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PADK2_27200 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PADK2_27210 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PADK2_27195 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PADK2_27215 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PADK2_12585 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_23165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_23170 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PADK2_26960 putative histidine/phenylalanine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PADK2_26985 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PADK2_26995 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PADK2_26955 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PADK2_08460 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D PADK2_27025 N-formimino-L-glutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D PADK2_26950 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_02120 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:pdk00350]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_12585 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_23165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08635 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PADK2_21375 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PADK2_15605 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PADK2_15615 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PADK2_12880 putative glutathione S-transferase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PADK2_15610 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PADK2_02120 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PADK2_03960 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D PADK2_06195 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PADK2_28870 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PADK2_03870 4-hydroxyphenylacetate 3-monooxygenase large chain K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D PADK2_03865 4-hydroxyphenylacetate 3-monooxygenase small chain K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D PADK2_15825 hypothetical protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D PADK2_01315 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PADK2_12895 gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D PADK2_12890 hypothetical protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:pdk00360]
D PADK2_21340 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PADK2_02120 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PADK2_03960 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D PADK2_26390 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06390 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PADK2_17570 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_12585 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_23165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08635 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PADK2_18770 putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D PADK2_21375 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PADK2_26915 oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D PADK2_28255 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D PADK2_07440 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22125 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22625 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:pdk00380]
D PADK2_12335 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D PADK2_15245 kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D PADK2_15250 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D PADK2_17775 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_02245 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_02120 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_07440 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22125 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22625 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_03490 catalase K03781 katE; catalase [EC:1.11.1.6]
D PADK2_14930 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6]
D PADK2_24500 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pdk00400]
D PADK2_10160 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_03610 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_09645 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_16145 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_16940 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_26685 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PADK2_01215 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PADK2_25715 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PADK2_01200 putative 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D PADK2_01210 shikimate 5-dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D PADK2_00125 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PADK2_26690 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PADK2_08515 bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D PADK2_17300 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PADK2_03070 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PADK2_20735 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PADK2_03170 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PADK2_20730 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PADK2_03175 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PADK2_08770 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PADK2_03180 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PADK2_00180 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PADK2_00185 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PADK2_27435 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D PADK2_08505 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PADK2_06885 cyclohexadienyl dehydratase precursor K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_12585 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_23165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08635 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PADK2_21340 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pdk00410]
D PADK2_25125 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PADK2_05775 spermidine dehydrogenase, SpdH K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_25120 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PADK2_02220 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PADK2_02215 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PADK2_02225 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PADK2_02235 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PADK2_00675 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PADK2_28300 omega amino acid--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_12470 putative acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D PADK2_00665 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_06500 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PADK2_21965 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pdk00430]
D PADK2_00825 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_01810 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_18950 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_04650 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D PADK2_08995 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PADK2_21535 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PADK2_21530 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:pdk00440]
D PADK2_19085 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D PADK2_19090 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PADK2_07380 putative phosphonate metabolism protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D PADK2_07370 putative phosphonate metabolism protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D PADK2_07375 phnH; carbon-phosphorus lyase complex subunit K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D PADK2_07395 putative ATP-binding component of ABC transporter K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D PADK2_07400 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D PADK2_07385 putative phosphonate metabolism protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D PADK2_07410 phnP; carbon-phosphorus lyase complex accessory protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pdk00450]
D PADK2_16440 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PADK2_16000 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PADK2_02015 putative cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PADK2_11580 thioredoxin reductase 1 K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PADK2_23140 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PADK2_23145 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PADK2_17500 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PADK2_25515 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PADK2_06850 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pdk00460]
D PADK2_17065 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PADK2_00825 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_01810 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_18950 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_14010 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PADK2_12995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_24445 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_14690 hydrogen cyanide synthase HcnA K10814 hcnA; hydrogen cyanide synthase HcnA [EC:1.4.99.5]
D PADK2_14685 hydrogen cyanide synthase HcnB K10815 hcnB; hydrogen cyanide synthase HcnB [EC:1.4.99.5]
D PADK2_14680 hydrogen cyanide synthase HcnC K10816 hcnC; hydrogen cyanide synthase HcnC [EC:1.4.99.5]
C 00470 D-Amino acid metabolism [PATH:pdk00470]
D PADK2_26140 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PADK2_28245 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PADK2_03665 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PADK2_22980 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PADK2_17520 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PADK2_18955 glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D PADK2_24765 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PADK2_23000 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PADK2_07485 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PADK2_27925 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PADK2_27920 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PADK2_05000 putative amino acid oxidase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D PADK2_05005 ornithine cyclodeaminase/mu-crystallin K19744 dauB; L-arginine dehydrogenase [EC:1.4.1.25]
D PADK2_19305 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D PADK2_19320 oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
D PADK2_19310 hypothetical protein K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
D PADK2_19315 hypothetical protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D PADK2_19380 dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D PADK2_19385 putative semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PADK2_14570 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PADK2_25665 hypothetical protein K23120 cntL; histidine 2-aminobutanoyltransferase [EC:2.5.1.152 2.5.1.-]
D PADK2_25660 hypothetical protein K23122 cntM; staphylopine/pseudopaline/yersinopine synthase [EC:1.5.1.52 1.5.1.-]
D PADK2_26915 oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D PADK2_28255 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:pdk00480]
D PADK2_00825 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_01810 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_18950 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_02475 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PADK2_23485 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PADK2_15125 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PADK2_23480 putative allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D PADK2_15130 putative allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D PADK2_15135 putative allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D PADK2_23475 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D PADK2_14755 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D PADK2_27535 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PADK2_02050 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PADK2_05165 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PADK2_08920 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PADK2_09170 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_16200 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_17430 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_18395 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_22935 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_10350 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_10270 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_02380 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_15520 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PADK2_11540 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PADK2_11545 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PADK2_13960 2-hydroxyacid dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]
D PADK2_08420 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PADK2_28935 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PADK2_10245 putative glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PADK2_21515 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PADK2_19205 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PADK2_23525 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PADK2_25340 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PADK2_17265 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pdk00540]
D PADK2_06120 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PADK2_22960 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PADK2_06110 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PADK2_16720 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PADK2_06125 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PADK2_09450 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PADK2_23215 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PADK2_06160 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PADK2_23220 putative phophatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PADK2_09460 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PADK2_26435 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PADK2_00055 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PADK2_08115 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PADK2_23490 lipopolysaccharide biosynthetic protein LpxO1 K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D PADK2_07720 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PADK2_15795 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PADK2_06585 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PADK2_24760 Lipid A 3-O-deacylase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PADK2_23055 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PADK2_26475 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PADK2_00030 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PADK2_07585 ADP-L-glycero-D-mannoheptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PADK2_26550 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PADK2_26555 ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PADK2_26540 lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D PADK2_23515 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PADK2_26545 UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pdk00541]
D PADK2_15530 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PADK2_03985 putative epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PADK2_06570 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PADK2_15535 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PADK2_27320 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PADK2_27310 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PADK2_27325 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PADK2_03980 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PADK2_27315 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PADK2_27705 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D PADK2_06610 phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_14105 putative phosphomannose isomerase/GDP-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_29005 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_29010 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PADK2_29015 oxidoreductase Rmd K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D PADK2_29500 glucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PADK2_08545 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PADK2_08550 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PADK2_08625 nucleotide sugar epimerase/dehydratase WbpM K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:pdk00550]
D PADK2_23180 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PADK2_09470 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PADK2_22985 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PADK2_23000 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PADK2_23015 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PADK2_03665 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PADK2_22980 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PADK2_23010 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PADK2_06080 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PADK2_15860 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PADK2_23005 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PADK2_22990 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PADK2_01900 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PADK2_26720 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PADK2_24965 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PADK2_04310 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PADK2_13915 penicillin-binding protein 3A K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PADK2_23020 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PADK2_04330 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PADK2_09110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pdk00552]
D PADK2_15860 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PADK2_08625 nucleotide sugar epimerase/dehydratase WbpM K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pdk00543]
D PADK2_06660 alginate biosynthesis protein Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D PADK2_06655 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D PADK2_06625 alginate o-acetyltransferase AlgI K19294 algI; alginate O-acetyltransferase complex protein AlgI
D PADK2_06620 alginate o-acetyltransferase AlgJ K19295 algJ; alginate O-acetyltransferase complex protein AlgJ
D PADK2_06615 alginate o-acetyltransferase AlgF K19296 algF; alginate O-acetyltransferase complex protein AlgF
D PADK2_06635 alginate biosynthesis protein AlgX K19293 algX; alginate biosynthesis protein AlgX
D PADK2_14110 putative glycosyl transferase K20997 pslA; polysaccharide biosynthesis protein PslA
D PADK2_14100 putative glycosyl transferase K25205 pslC; polysaccharide biosynthesis protein PslC
D PADK2_14085 putative glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH
D PADK2_14080 putative transferase K21002 pslI; polysaccharide biosynthesis protein PslI
D PADK2_05245 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pdk00730]
D PADK2_26355 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PADK2_04445 bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PADK2_05255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_15335 putative pyridoxal-phosphate dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_27085 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PADK2_24170 D-amino acid oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PADK2_04105 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PADK2_01915 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PADK2_04440 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PADK2_04070 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PADK2_26250 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PADK2_07805 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PADK2_05910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pdk00740]
D PADK2_04090 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PADK2_04055 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PADK2_04045 riboflavin-specific deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PADK2_27940 hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D PADK2_04060 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PADK2_04050 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PADK2_24235 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PADK2_00955 putative acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D PADK2_03865 4-hydroxyphenylacetate 3-monooxygenase small chain K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D PADK2_13485 NADH-dependent FMN reductase MsuE K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PADK2_07030 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PADK2_19275 putative nitroreductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D PADK2_26345 adenosine diphosphate sugar pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PADK2_04230 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pdk00750]
D PADK2_20440 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PADK2_29320 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PADK2_02780 D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D PADK2_18785 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D PADK2_08500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PADK2_02990 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PADK2_14595 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PADK2_21825 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PADK2_05660 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pdk00760]
D PADK2_21890 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PADK2_20720 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PADK2_23550 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PADK2_22800 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PADK2_26085 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PADK2_06215 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PADK2_04295 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PADK2_26075 putative icotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PADK2_21030 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PADK2_16550 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PADK2_26090 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PADK2_06250 putative competence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PADK2_14965 putative ompetence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PADK2_26080 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PADK2_19655 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PADK2_20045 cobalamin biosynthetic protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PADK2_08895 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PADK2_09395 soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D PADK2_00980 NAD(P)(+) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PADK2_00985 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PADK2_00990 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PADK2_17700 putative oxidoreductase K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D PADK2_17705 putative aldehyde dehydrogenase K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D PADK2_01315 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pdk00770]
D PADK2_24945 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_18625 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_15470 thiamine pyrophosphate protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PADK2_24940 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PADK2_24935 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PADK2_01770 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PADK2_25115 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PADK2_17720 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PADK2_16925 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PADK2_22915 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PADK2_25120 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PADK2_03275 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PADK2_28335 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PADK2_21030 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PADK2_01820 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PADK2_23595 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PADK2_22680 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D PADK2_26560 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PADK2_02220 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PADK2_02215 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PADK2_02225 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PADK2_02235 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PADK2_25125 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pdk00780]
D PADK2_02530 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PADK2_00510 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PADK2_17665 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PADK2_09530 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PADK2_18795 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PADK2_00915 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_03880 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_09520 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_25405 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_18375 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_22870 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_29360 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_06115 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PADK2_16635 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PADK2_02525 putative biotin biosynthesis protein bioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PADK2_02520 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PADK2_02115 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PADK2_02535 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PADK2_02515 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PADK2_03270 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pdk00785]
D PADK2_04340 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PADK2_04345 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_26570 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PADK2_26575 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PADK2_17780 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PADK2_17775 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PADK2_14040 2-oxoisovalerate dehydrogenase (alpha subunit) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PADK2_07175 putative pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PADK2_14035 2-oxoisovalerate dehydrogenase (beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PADK2_07180 putative pyruvate dehydrogenase E1 component, beta chain K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PADK2_14030 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PADK2_07185 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PADK2_12990 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PADK2_27585 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PADK2_13005 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PADK2_27595 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PADK2_12985 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PADK2_27590 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PADK2_25455 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pdk00790]
D PADK2_07075 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PADK2_17335 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PADK2_29435 putative GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PADK2_07805 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PADK2_04775 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PADK2_02935 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PADK2_02940 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PADK2_25110 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PADK2_25220 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PADK2_01755 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PADK2_08780 folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PADK2_04090 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PADK2_04055 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PADK2_16895 para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PADK2_09535 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PADK2_07070 folX; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D PADK2_07080 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D PADK2_11320 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PADK2_21345 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PADK2_21340 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PADK2_20815 putative radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PADK2_20810 hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PADK2_10385 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PADK2_04985 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PADK2_18195 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PADK2_04735 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PADK2_04745 molybdopterin converting factor, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PADK2_04750 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PADK2_09200 molybdopterin biosynthetic protein B2 K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PADK2_04755 molybdenum cofactor biosynthetic protein A1 K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PADK2_09205 molybdenum cofactor biosynthesis protein A2 K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PADK2_24530 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D PADK2_09195 mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pdk00670]
D PADK2_01755 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PADK2_07080 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D PADK2_16700 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PADK2_12995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_24445 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PADK2_20975 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PADK2_25755 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PADK2_00090 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PADK2_13005 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PADK2_27595 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PADK2_16440 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PADK2_01715 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PADK2_22485 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PADK2_28835 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PADK2_02170 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PADK2_27660 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pdk00860]
D PADK2_08660 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PADK2_24785 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PADK2_03885 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PADK2_04435 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PADK2_29355 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PADK2_27740 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PADK2_27830 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PADK2_27825 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PADK2_26665 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PADK2_00120 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PADK2_17990 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PADK2_03230 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D PADK2_24730 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PADK2_27820 uroporphyrin-III C-methyltransferase, putative K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PADK2_11605 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PADK2_16790 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PADK2_02565 putative uroporphyrin-III c-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PADK2_02590 protein nirD K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D PADK2_02580 putative transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D PADK2_02585 heme d1 biosynthesis protein NirL K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D PADK2_02575 heme d1 biosynthesis protein NirH K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D PADK2_02560 c-type cytochrome K24867 nirN; dihydro-heme d1 dehydrogenase
D PADK2_00580 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PADK2_19035 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PADK2_00575 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PADK2_09850 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PADK2_09840 oxidoreductase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D PADK2_09855 precorrin-3 methylase CobJ K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D PADK2_09615 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PADK2_09620 hypothetical protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D PADK2_09825 cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PADK2_09830 cbiD; cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D PADK2_09835 precorrin-6y-dependent methyltransferase CobL K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PADK2_09845 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PADK2_19280 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PADK2_09640 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PADK2_16020 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PADK2_22925 putative cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PADK2_19285 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PADK2_19260 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PADK2_19270 cobD; cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PADK2_19265 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D PADK2_19255 cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PADK2_19240 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PADK2_19250 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PADK2_19245 hypothetical protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D PADK2_09650 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D PADK2_22290 heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D PADK2_22865 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D PADK2_06710 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D PADK2_03495 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D PADK2_25890 putative bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pdk00130]
D PADK2_20850 hypothetical protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D PADK2_28520 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D PADK2_28525 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PADK2_27710 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PADK2_04230 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PADK2_27625 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D PADK2_08480 bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PADK2_27635 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PADK2_26810 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PADK2_03200 putative ubiquinone biosynthesis protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D PADK2_03515 salicylate biosynthesis isochorismate synthase K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2]
D PADK2_17620 putative thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PADK2_19515 putative NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PADK2_19520 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PADK2_26365 NAD(P)H quinone oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PADK2_21440 putative oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PADK2_20950 Trp repressor binding protein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PADK2_21375 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pdk00900]
D PADK2_04105 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PADK2_06090 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PADK2_06175 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PADK2_24800 ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PADK2_06205 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PADK2_05310 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PADK2_24215 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04230 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PADK2_04110 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PADK2_24275 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PADK2_06080 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:pdk00903]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_15160 putative esterase/deacetylase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:pdk00907]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_09935 putative dehydrogenase involved in catabolism of citronellol K13774 atuB; citronellol/citronellal dehydrogenase
D PADK2_09910 short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase
D PADK2_09905 long-chain-acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D PADK2_09925 putative acyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D PADK2_09915 geranyl-CoA carboxylase, alpha-subunit (biotin-containing) K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D PADK2_09930 geranyl-CoA carboxylase, subunit beta K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D PADK2_09920 enoyl-CoA hydratase K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D PADK2_15595 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PADK2_09280 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_09660 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_06990 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PADK2_02765 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pdk00523]
D PADK2_27320 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PADK2_27310 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PADK2_27325 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PADK2_03980 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PADK2_27315 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:pdk01053]
D PADK2_03515 salicylate biosynthesis isochorismate synthase K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2]
D PADK2_19820 PcpS K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D PADK2_03520 isochorismate-pyruvate lyase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
D PADK2_03530 pyochelin biosynthesis protein PchD K12238 pchD; salicylate---[aryl-carrier protein] ligase [EC:6.2.1.61]
D PADK2_03540 dihydroaeruginoic acid synthetase K12239 pchE; L-cysteine---[L-cysteinyl-carrier protein] ligase PchE [EC:6.2.1.69]
D PADK2_03545 pyochelin synthetase K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D PADK2_03550 pyochelin biosynthetic protein PchG K12241 pchG; pyochelin biosynthesis protein PchG
C 01055 Biosynthesis of vancomycin group antibiotics
D PADK2_27310 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pdk00946]
D PADK2_17065 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PADK2_01515 putative penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PADK2_16185 hypothetical protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:pdk00332]
D PADK2_24255 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PADK2_04290 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pdk00261]
D PADK2_13210 putative MbtH-like protein K05375 mbtH; MbtH protein
D PADK2_23140 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D PADK2_23145 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PADK2_21180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PADK2_08750 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PADK2_01100 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PADK2_03730 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PADK2_16215 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PADK2_20690 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PADK2_25265 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pdk00521]
D PADK2_08365 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PADK2_28345 phosphomannomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PADK2_05235 extragenic suppressor protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PADK2_27320 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PADK2_27310 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PADK2_27325 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PADK2_03980 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PADK2_27315 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PADK2_08365 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pdk00525]
D PADK2_27320 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PADK2_27310 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pdk00401]
D PADK2_08515 bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_12585 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_23165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08635 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:pdk00405]
D PADK2_03600 phenazine biosynthesis protein PhzE K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D PADK2_16135 phenazine biosynthesis protein PhzE K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D PADK2_16140 phenazine biosynthesis protein PhzD K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15]
D PADK2_03605 phenazine biosynthesis protein PhzD K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15]
D PADK2_16130 putative phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D PADK2_03595 putative phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D PADK2_03620 phenazine biosynthesis protein K20260 phzA_B; phenazine biosynthesis protein
D PADK2_16150 phenazine biosynthesis protein K20260 phzA_B; phenazine biosynthesis protein
D PADK2_16155 putative phenazine biosynthesis protein K20260 phzA_B; phenazine biosynthesis protein
D PADK2_03615 phenazine biosynthesis protein K20260 phzA_B; phenazine biosynthesis protein
D PADK2_03590 pyrodoxamine 5'-phosphate oxidase K20262 phzG; dihydrophenazinedicarboxylate synthase [EC:1.10.3.16]
D PADK2_03625 putative phenazine-specific methyltransferase K21103 phzM; phenazine-1-carboxylate N-methyltransferase [EC:2.1.1.327]
D PADK2_03585 hypothetical protein K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D PADK2_03070 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PADK2_20735 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PADK2_03170 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PADK2_20730 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PADK2_20760 coenzyme A ligase K18000 pqsA; anthranilate-CoA ligase [EC:6.2.1.32]
D PADK2_20745 3-oxoacyl-(acyl carrier protein) synthase III K18003 pqsD; anthraniloyl-CoA anthraniloyltransferase [EC:2.3.1.262]
D PADK2_20740 Quinolone signal response protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
D PADK2_20755 beta-keto-acyl-acyl-carrier-like protein synthase K18001 pqsB; 2-heptyl-4(1H)-quinolone synthase subunit PqsB [EC:2.3.1.230]
D PADK2_20750 beta-keto-acyl-acyl-carrier-like protein synthase K18002 pqsC; 2-heptyl-4(1H)-quinolone synthase subunit PqsC [EC:2.3.1.230]
D PADK2_11725 putative FAD-dependent monooxygenase K17940 pqsH; 2-heptyl-3-hydroxy-4(1H)-quinolone synthase [EC:1.14.13.182]
C 00333 Prodigiosin biosynthesis
D PADK2_09515 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PADK2_00915 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_03880 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_09520 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_25405 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_18375 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_22870 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_29360 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_16635 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PADK2_07600 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PADK2_09525 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PADK2_16305 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pdk00999]
D PADK2_02755 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PADK2_00125 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PADK2_17065 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:pdk00997]
D PADK2_14005 pyoverdine biosynthesis protein PvcA K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24]
D PADK2_14000 pyoverdine biosynthesis protein PvcB K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10]
D PADK2_13995 pyoverdine biosynthesis protein PvcC K25524 pvcC; paerucumarin biosynthesis protein PvcC [EC:1.14.-.-]
D PADK2_13990 pyoverdine biosynthesis protein PvcD K25525 pvcD; paerucumarin biosynthesis protein PvcD
D PADK2_13085 PvdYII K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pdk00362]
D PADK2_12655 toluate 1,2-dioxygenase alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D PADK2_12660 toluate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D PADK2_12665 toluate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D PADK2_12670 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D PADK2_12710 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D PADK2_12700 muconate cycloisomerase I K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D PADK2_12705 muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D PADK2_01140 beta-ketoadipate enol-lactone hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D PADK2_02415 hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D PADK2_08195 putative hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D PADK2_09280 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_09660 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_06990 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_01125 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D PADK2_00780 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D PADK2_00775 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D PADK2_01135 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D PADK2_01145 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PADK2_23360 putative carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PADK2_01225 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D PADK2_20850 hypothetical protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_02245 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06390 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PADK2_17570 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pdk00627]
D PADK2_19600 hypothetical protein K10215 ethA; monooxygenase [EC:1.14.13.-]
D PADK2_07440 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22125 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22625 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_20920 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PADK2_25995 benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D PADK2_04230 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PADK2_12685 anthranilate dioxygenase large subunit K05599 antA; anthranilate 1,2-dioxygenase (deaminating, decarboxylating) large subunit [EC:1.14.12.1]
D PADK2_12680 anthranilate dioxygenase small subunit K05600 antB; anthranilate 1,2-dioxygenase (deaminating, decarboxylating) small subunit [EC:1.14.12.1]
D PADK2_12675 antC; anthranilate dioxygenase reductase K11311 antC; anthranilate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D PADK2_26010 vanillate O-demethylase oxygenase subunit K03862 vanA; vanillate monooxygenase [EC:1.14.13.82]
D PADK2_26015 vanillate O-demethylase oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:pdk00364]
D PADK2_12655 toluate 1,2-dioxygenase alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D PADK2_12660 toluate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D PADK2_12665 toluate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D PADK2_12670 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D PADK2_12710 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D PADK2_11240 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PADK2_12700 muconate cycloisomerase I K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pdk00625]
D PADK2_28870 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PADK2_06195 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PADK2_25985 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PADK2_28840 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D PADK2_15740 quinoprotein alcohol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D PADK2_15220 putative epoxide hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D PADK2_21630 putative haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pdk00361]
D PADK2_12710 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D PADK2_11240 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PADK2_12700 muconate cycloisomerase I K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D PADK2_21630 putative haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D PADK2_15220 putative epoxide hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:pdk00623]
D PADK2_12710 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D PADK2_12700 muconate cycloisomerase I K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D PADK2_11240 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:pdk00622]
D PADK2_12655 toluate 1,2-dioxygenase alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D PADK2_12660 toluate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D PADK2_12665 toluate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D PADK2_12670 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D PADK2_15235 putative ring-hydroxylating dioxygenase subunit K10619 cmtAb; p-cumate 2,3-dioxygenase subunit alpha [EC:1.14.12.25]
D PADK2_15225 ring-hydroxylating dioxygenase small subunit K16303 cmtAc; p-cumate 2,3-dioxygenase subunit beta [EC:1.14.12.25]
C 00633 Nitrotoluene degradation [PATH:pdk00633]
D PADK2_09705 morphinone reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D PADK2_18970 putative oxidoreductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D PADK2_09280 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_09660 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PADK2_06990 putative acyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:pdk00643]
D PADK2_03960 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D PADK2_15605 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PADK2_15615 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PADK2_12880 putative glutathione S-transferase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PADK2_15610 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PADK2_07440 amiE; acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22125 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_22625 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PADK2_01115 putative CoA transferase, subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D PADK2_01120 putative CoA transferase, subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation [PATH:pdk00791]
D PADK2_02490 hypothetical protein K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D PADK2_25830 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D PADK2_25825 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D PADK2_25815 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:pdk00930]
D PADK2_12360 alkane-1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PADK2_18100 alkane-1-monooxygenase 2 K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PADK2_15160 putative esterase/deacetylase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D PADK2_17555 putative acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PADK2_17565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_06385 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PADK2_09275 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PADK2_17005 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D PADK2_03850 putative 2,4'-dihydroxyacetophenone dioxygenase K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pdk00626]
D PADK2_28870 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PADK2_06195 alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D PADK2_00780 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D PADK2_00775 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pdk03020]
D PADK2_03320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PADK2_03325 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PADK2_03480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PADK2_28420 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D PADK2_16325 putative DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pdk03010]
D PADK2_08525 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PADK2_06060 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PADK2_03385 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PADK2_03475 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PADK2_03440 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PADK2_26165 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PADK2_03335 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PADK2_03425 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PADK2_23090 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PADK2_03350 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PADK2_03470 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PADK2_03330 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PADK2_03465 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PADK2_03420 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PADK2_25175 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PADK2_05610 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PADK2_03400 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PADK2_26160 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PADK2_03375 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PADK2_24245 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PADK2_02920 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PADK2_03305 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PADK2_03370 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PADK2_03355 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PADK2_03360 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PADK2_03415 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PADK2_03430 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PADK2_03315 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PADK2_26150 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PADK2_03310 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PADK2_03300 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PADK2_23095 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PADK2_03405 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PADK2_03450 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PADK2_03390 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PADK2_03485 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PADK2_03435 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PADK2_05625 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PADK2_10800 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PADK2_24270 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PADK2_03380 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PADK2_03365 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PADK2_03410 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PADK2_24810 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PADK2_24265 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PADK2_28315 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PADK2_03395 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PADK2_03445 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PADK2_06335 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PADK2_26740 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PADK2_09505 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PADK2_28310 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PADK2_29590 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PADK2_10795 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PADK2_03460 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PADK2_06340 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PADK2_r29735 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29737 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29739 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29733 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29743 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29747 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29741 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29729 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29731 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29727 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29725 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pdk00970]
D PADK2_t29685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29703 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29721 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29603 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29623 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29627 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29597 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29667 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29677 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29697 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29695 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PADK2_t29621 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PADK2_t29619 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PADK2_t29659 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PADK2_t29633 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PADK2_t29635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PADK2_t29655 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PADK2_t29699 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PADK2_t29625 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PADK2_t29629 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PADK2_t29641 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PADK2_t29683 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29607 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29643 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29653 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29661 tRNA-His K14226 tRNA-His; tRNA His
D PADK2_t29665 tRNA-His K14226 tRNA-His; tRNA His
D PADK2_t29601 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PADK2_t29687 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PADK2_t29705 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PADK2_t29723 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PADK2_t29709 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29613 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29657 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29663 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29713 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29671 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PADK2_t29691 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PADK2_t29701 tRNA-Met K14230 tRNA-Met; tRNA Met
D PADK2_t29599 tRNA-Met K14230 tRNA-Met; tRNA Met
D PADK2_t29673 tRNA-Met K14230 tRNA-Met; tRNA Met
D PADK2_t29707 tRNA-Met K14230 tRNA-Met; tRNA Met
D PADK2_t29717 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PADK2_t29693 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PADK2_t29637 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PADK2_t29649 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PADK2_t29651 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PADK2_t29669 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PADK2_t29679 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PADK2_t29639 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PADK2_t29719 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PADK2_t29689 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PADK2_t29609 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PADK2_t29611 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PADK2_t29605 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PADK2_t29617 tRNA-Val K14237 tRNA-Val; tRNA Val
D PADK2_t29647 tRNA-Val K14237 tRNA-Val; tRNA Val
D PADK2_t29631 tRNA-Val K14237 tRNA-Val; tRNA Val
D PADK2_t29711 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PADK2_08660 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PADK2_23345 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PADK2_23350 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PADK2_23340 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PADK2_16710 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PADK2_21185 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PADK2_20875 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PADK2_00045 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PADK2_00040 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PADK2_10785 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PADK2_11600 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PADK2_25515 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PADK2_16705 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PADK2_06850 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PADK2_00090 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PADK2_05150 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PADK2_04385 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PADK2_24230 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PADK2_05840 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PADK2_26750 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PADK2_20910 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PADK2_05315 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PADK2_10805 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PADK2_10810 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PADK2_03265 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PADK2_23125 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pdk03060]
D PADK2_03455 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PADK2_03290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PADK2_25205 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PADK2_05220 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PADK2_05225 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PADK2_05215 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PADK2_29580 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PADK2_22945 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PADK2_27135 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PADK2_05605 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PADK2_01875 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PADK2_28100 arsenite-activated ATPase (arsA) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PADK2_26835 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PADK2_26840 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PADK2_26845 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D PADK2_19125 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PADK2_21850 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PADK2_12225 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PADK2_24225 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pdk04122]
D PADK2_05255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_15335 putative pyridoxal-phosphate dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_26270 thiosulfate:cyanide sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PADK2_19180 putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PADK2_17895 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PADK2_20710 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PADK2_11625 putative DsrH family protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PADK2_11630 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PADK2_11635 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PADK2_11620 hypothetical protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PADK2_11530 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PADK2_04745 molybdopterin converting factor, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PADK2_04985 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PADK2_18195 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PADK2_04740 molybdopterin converting factor, small subunit K03636 moaD; sulfur-carrier protein
D PADK2_18860 hypothetical protein K03636 moaD; sulfur-carrier protein
D PADK2_24770 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PADK2_04735 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PADK2_04750 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PADK2_09200 molybdopterin biosynthetic protein B2 K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PADK2_27085 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PADK2_01910 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pdk03018]
D PADK2_01685 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PADK2_09475 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PADK2_05010 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PADK2_06165 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PADK2_25170 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PADK2_02160 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PADK2_04575 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PADK2_26175 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PADK2_10175 putative ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PADK2_07550 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PADK2_27720 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PADK2_25275 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PADK2_22850 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PADK2_26210 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PADK2_27735 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PADK2_13075 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PADK2_00715 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PADK2_25105 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pdk03030]
D PADK2_08165 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_16585 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_06140 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PADK2_09550 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PADK2_04375 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PADK2_05160 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PADK2_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PADK2_23685 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PADK2_26145 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PADK2_02910 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PADK2_03510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_23765 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_16590 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PADK2_06130 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PADK2_29205 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PADK2_18080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pdk03410]
D PADK2_06800 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PADK2_21950 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PADK2_27240 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PADK2_04275 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PADK2_01790 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PADK2_17270 DNA-3-methyladenine glycosidase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PADK2_00050 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PADK2_12510 exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PADK2_28395 catabolite repression control protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PADK2_29205 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PADK2_05715 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PADK2_18080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pdk03420]
D PADK2_09335 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PADK2_03500 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PADK2_08640 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PADK2_11735 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PADK2_28170 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_28960 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_14140 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_29205 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PADK2_18080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PADK2_16325 putative DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:pdk03430]
D PADK2_06240 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PADK2_26220 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D PADK2_28170 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_28960 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_14140 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_22495 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PADK2_05445 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PADK2_04115 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PADK2_05715 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PADK2_03510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_23765 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_06140 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PADK2_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PADK2_04375 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PADK2_09550 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PADK2_08165 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_16585 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_05160 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PADK2_18080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PADK2_23725 DNA adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pdk03440]
D PADK2_05715 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PADK2_03510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_23765 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_00015 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D PADK2_21830 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PADK2_18050 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PADK2_06255 recA; recombinase A K03553 recA; recombination protein RecA
D PADK2_29205 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PADK2_20860 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PADK2_20855 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PADK2_20865 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PADK2_28460 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PADK2_22325 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PADK2_22330 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PADK2_22320 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PADK2_06140 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PADK2_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PADK2_04375 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PADK2_09550 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PADK2_08165 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_16585 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_05160 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PADK2_26745 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PADK2_11015 hypothetical protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining [PATH:pdk03450]
D PADK2_14915 putative KU domain protein K10979 ku; DNA end-binding protein Ku
D PADK2_14980 ligD; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pdk03250]
D PADK2_08190 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pdk02010]
D PADK2_18255 sulfate-binding protein of ABC transporter K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PADK2_01405 sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PADK2_01400 sulfate transport protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PADK2_01395 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PADK2_01390 sulfate transport protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PADK2_04635 putative periplasmic taurine-binding protein precursor K15551 tauA; taurine transport system substrate-binding protein
D PADK2_04645 putative permease of ABC taurine transporter K15552 tauC; taurine transport system permease protein
D PADK2_04640 putative ATP-binding component of ABC taurine transporter K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PADK2_07015 putative sulfonate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_07035 putative ABC-type transporter periplasmic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11680 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11685 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11690 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_00935 sulfate ester transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11665 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_13725 putative ABC transporter, periplasmic binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_13790 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_07020 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_07045 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PADK2_00930 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_13735 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_13795 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_00925 ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_07025 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_07050 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_13730 putative ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_13800 ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_16340 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PADK2_16345 molybdenum transport protein ModB K02018 modB; molybdate transport system permease protein
D PADK2_16350 molybdenum transport protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PADK2_27605 putative binding protein component of ABC iron transporter K02012 afuA; iron(III) transport system substrate-binding protein
D PADK2_24895 ferric iron-binding periplasmic protein HitA K02012 afuA; iron(III) transport system substrate-binding protein
D PADK2_27600 putative permease of ABC iron transporter K02011 afuB; iron(III) transport system permease protein
D PADK2_24900 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D PADK2_06675 putative ATP-binding component of ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PADK2_06290 polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PADK2_01610 putative binding protein component of ABC transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PADK2_06295 polyamine transport protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D PADK2_01615 putative permease of ABC transporter K11070 potC; spermidine/putrescine transport system permease protein
D PADK2_06300 polyamine transport protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D PADK2_01620 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D PADK2_06305 polyamine transport protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PADK2_01625 putative ATP-binding component of ABC transporter K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PADK2_01465 putative periplasmic polyamine binding protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_01490 polyamine transport protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_01495 polyamine transport protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_11095 putative periplasmic spermidine/putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_11700 putative periplasmic spermidine/putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_18660 putative periplasmic spermidine/putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_01510 polyamine transport protein PotI K11074 potI; putrescine transport system permease protein
D PADK2_01505 polyamine transport protein PotH K11075 potH; putrescine transport system permease protein
D PADK2_01500 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PADK2_00150 putative glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_08145 putative glycine betaine-binding protein precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_26975 putative binding protein component of ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_27010 putative ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_28625 putative glycine betaine/L-proline ABC transporter, periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_28675 putative glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_26970 putative permease of ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D PADK2_28620 glycine/betaine/L-proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PADK2_26965 putative ATP-binding component of ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PADK2_28615 putative ATP-binding component of ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PADK2_04885 putative binding protein component of ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D PADK2_04880 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PADK2_04890 putative permease of ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D PADK2_04875 putative ATP-binding component of ABC transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PADK2_13565 putative ATP-binding component of ABC maltose/mannitol transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PADK2_08400 putative ATP-binding component of ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PADK2_13580 binding protein component of ABC maltose/mannitol transporter K10227 smoE; polyol transport system substrate-binding protein
D PADK2_13575 putative binding-protein-dependent maltose/mannitol transport protein K10228 smoF; polyol transport system permease protein
D PADK2_13570 putative binding-protein-dependent maltose/mannitol transport protein K10229 smoG; polyol transport system permease protein
D PADK2_23195 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PADK2_08260 ABC-type transporter, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PADK2_23200 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PADK2_08270 putative permease of ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PADK2_23205 putative permease of ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PADK2_23190 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D PADK2_08265 putative ATP-binding component of ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PADK2_23210 putative ATP-binding component of ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PADK2_00740 putative basic membrane protein (bmp) K07335 bmpA; basic membrane protein A and related proteins
D PADK2_00695 putative permease of ABC transporter K23535 nupB; general nucleoside transport system permease protein
D PADK2_00700 putative permease of ABC transporter K23536 nupC; general nucleoside transport system permease protein
D PADK2_00690 putative ATP-binding component of ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D PADK2_08385 putative binding protein component of ABC sugar transporter K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PADK2_08390 putative permease of ABC sugar transporter K17316 gtsB; glucose/mannose transport system permease protein
D PADK2_08395 putative permease of ABC sugar transporter K17317 gtsC; glucose/mannose transport system permease protein
D PADK2_15925 binding protein component precursor of ABC ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D PADK2_15915 membrane protein component of ABC ribose transporter K10440 rbsC; ribose transport system permease protein
D PADK2_15920 ribose transporter RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PADK2_12495 putative ABC-type periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PADK2_28580 phosphate ABC transporter, periplasmic phosphate-binding protein, PstS K02040 pstS; phosphate transport system substrate-binding protein
D PADK2_28575 membrane protein component of ABC phosphate transporter K02037 pstC; phosphate transport system permease protein
D PADK2_28570 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D PADK2_28565 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PADK2_07355 binding protein component of ABC phosphonate transporter K02044 phnD; phosphonate transport system substrate-binding protein
D PADK2_07705 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D PADK2_07360 phosphonate transport protein PhnE K02042 phnE; phosphonate transport system permease protein
D PADK2_07690 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D PADK2_07695 putative permease of ABC transporter K02042 phnE; phosphonate transport system permease protein
D PADK2_07350 ATP-binding component of ABC phosphonate transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PADK2_07700 putative ATP-binding component of ABC transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PADK2_09745 histidine/lysine/arginine/ornithine ABC transporter permease HisM K10015 hisM; histidine transport system permease protein
D PADK2_09750 histidine transport system permease HisQ K10016 hisQ; histidine transport system permease protein
D PADK2_09740 histidine transport protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_09755 periplasmic histidine-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein
D PADK2_18930 putative binding protein component of ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PADK2_18940 putative permease of ABC transporter K10002 gltK; glutamate/aspartate transport system permease protein
D PADK2_18935 putative permease of ABC transporter K10003 gltJ; glutamate/aspartate transport system permease protein
D PADK2_18945 putative ATP-binding component of ABC transporter K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_05025 putative amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PADK2_01565 L-cysteine transporter of ABC system FliY K02424 tcyA; L-cystine transport system substrate-binding protein
D PADK2_01560 ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D PADK2_04990 putative amino acid binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PADK2_21260 arginine/ornithine binding protein AotJ K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PADK2_21250 arginine/ornithine transport protein AotM K10023 aotM; arginine/ornithine transport system permease protein
D PADK2_21255 arginine/ornithine transport protein AotQ K10024 aotQ; arginine/ornithine transport system permease protein
D PADK2_21240 arginine/ornithine transport protein AotP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_27270 putative periplasmic binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein
D PADK2_27275 putative permease of ABC transporter K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D PADK2_27280 putative permease of ABC transporter K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D PADK2_27265 putative ATP-binding component of ABC transporter K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_19350 putative binding protein component of ABC transporter K23061 lhpP; hydroxyproline transporter system substrate-binding protein
D PADK2_19360 putative permease of ABC transporter K23062 lhpM; hydroxyproline transport system permease protein
D PADK2_19365 ABC transporter permease K23063 lhpN; hydroxyproline transport system permease protein
D PADK2_19370 putative ATP-binding component of ABC transporter K23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_07450 aliphatic amidase expression-regulating protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_26055 putative binding protein component of ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_20310 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_26050 putative permease of ABC branched chain amino acid transporter K01997 livH; branched-chain amino acid transport system permease protein
D PADK2_20315 branched-chain amino acid transport protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D PADK2_26045 putative permease of ABC branched-chain amino acid transporter K01998 livM; branched-chain amino acid transport system permease protein
D PADK2_20320 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PADK2_26040 putative ATP-binding component of ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PADK2_20325 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PADK2_20330 branched-chain amino acid transport protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PADK2_26035 putative ATP-binding component of ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PADK2_04670 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D PADK2_13525 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D PADK2_29265 putative TonB-dependent receptor K02073 metQ; D-methionine transport system substrate-binding protein
D PADK2_13515 putative permease of ABC transporter K02072 metI; D-methionine transport system permease protein
D PADK2_29260 putative permease of ABC transporter K02072 metI; D-methionine transport system permease protein
D PADK2_13520 phosphate ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PADK2_29255 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D PADK2_25780 hypothetical protein K11959 urtA; urea transport system substrate-binding protein
D PADK2_25785 putative branched-chain amino acid ABC transporter, permease protein K11960 urtB; urea transport system permease protein
D PADK2_25790 putative permease of ABC transporter K11961 urtC; urea transport system permease protein
D PADK2_25795 putative ATP-binding component of ABC transporter K11962 urtD; urea transport system ATP-binding protein
D PADK2_25800 ATP-binding component of ABC transporter K11963 urtE; urea transport system ATP-binding protein
D PADK2_28320 putative binding protein component of ABC dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23440 putative binding protein component of ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23410 putative binding protein component of ABC transpor K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23415 ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23430 putative binding protein component of ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23445 putative permease of ABC transporter K12369 dppB; dipeptide transport system permease protein
D PADK2_23450 putative permease of ABC transporter K12370 dppC; dipeptide transport system permease protein
D PADK2_23455 putative ATP-binding component of ABC transporter K12371 dppD; dipeptide transport system ATP-binding protein
D PADK2_23460 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein
D PADK2_15355 putative binding protein component of ABC transporter K13893 yejA; microcin C transport system substrate-binding protein
D PADK2_16610 putative solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PADK2_16615 putative binding protein component of ABC transporter K13893 yejA; microcin C transport system substrate-binding protein
D PADK2_15350 putative permease of ABC transporter K13894 yejB; microcin C transport system permease protein
D PADK2_16620 putative permease of ABC transporter K13894 yejB; microcin C transport system permease protein
D PADK2_15345 putative permease of ABC transporter K13895 yejE; microcin C transport system permease protein
D PADK2_16625 putative permease of ABC transporter K13895 yejE; microcin C transport system permease protein
D PADK2_15340 ATP-binding component of ABC transporter K13896 yejF; microcin C transport system ATP-binding protein
D PADK2_16630 microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein
D PADK2_04100 putative ABC transporter K06858 btuF; vitamin B12 transport system substrate-binding protein
D PADK2_13235 putative adhesion protein K09815 znuA; zinc transport system substrate-binding protein
D PADK2_29230 putative adhesin K09815 znuA; zinc transport system substrate-binding protein
D PADK2_13225 putative permease of ABC transporter K09816 znuB; zinc transport system permease protein
D PADK2_29245 permease of ABC zinc transporter ZnuB K09816 znuB; zinc transport system permease protein
D PADK2_13230 putative ATP-binding component of ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PADK2_29240 zinc transport protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PADK2_11260 putative permease of ABC-2 transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D PADK2_29000 membrane subunit of A-band LPS efflux transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D PADK2_28995 ABC subunit of A-band LPS efflux transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PADK2_09415 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PADK2_09425 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PADK2_09420 putative ATP-binding component of ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PADK2_18335 heme exporter protein D K02196 ccmD; heme exporter protein D
D PADK2_18340 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D PADK2_18345 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PADK2_18350 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PADK2_05180 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D PADK2_05185 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D PADK2_23235 putative ATP-binding component of ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PADK2_07295 NosY protein K19341 nosY; Cu-processing system permease protein
D PADK2_07300 NosF protein K19340 nosF; Cu-processing system ATP-binding protein
D PADK2_01885 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PADK2_01880 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PADK2_26480 transport protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PADK2_08185 ATP-binding/permease fusion ABC transporter K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PADK2_16270 ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PADK2_07235 transport protein HasD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PADK2_19420 alkaline protease secretion protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PADK2_13315 putative ATP-binding/permease fusion ABC transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PADK2_13280 pyoverdine biosynthesis protein PvdE K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pdk02060]
D PADK2_05530 putative phosphotransferase system protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PADK2_06555 putative phosphotransferase system enzyme I K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PADK2_05535 putative phosphotransferase protein K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PADK2_06565 phosphotransferase system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PADK2_06560 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PADK2_01690 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PADK2_23260 phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr
D PADK2_23250 nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pdk03070]
D PADK2_26360 putative outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_24390 outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_17100 type III export protein PscF K03221 yscF; type III secretion protein F
D PADK2_17220 translocation protein in type III secretion K04056 yscO; type III secretion protein O
D PADK2_17225 translocation protein in type III secretion K04057 yscP; type III secretion protein P
D PADK2_17195 Yop proteins translocation protein X K04059 yscX; type III secretion protein X
D PADK2_17115 Type III secretion outer membrane protein PscC precursor K03219 yscC; type III secretion protein C
D PADK2_17210 Type III secretion outer membrane protein PopN precursor K04058 yscW; type III secretion protein W
D PADK2_17080 pscJ type III export protein K03222 yscJ; type III secretion protein J
D PADK2_17235 type III secretion system protein YscR K03226 yscR; type III secretion protein R
D PADK2_17240 putative translocation protein in type III secretion K03227 yscS; type III secretion protein S
D PADK2_17245 translocation protein in type III secretion K03228 yscT; type III secretion protein T
D PADK2_17250 translocation protein in type III secretion K03229 yscU; type III secretion protein U
D PADK2_17185 type III secretory apparatus protein PcrD K03230 yscV; type III secretion protein V
D PADK2_17215 type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D PADK2_17230 type III secretion system protein K03225 yscQ; type III secretion protein Q
D PADK2_17070 type III secretion system protein K03223 yscL; type III secretion protein L
D PADK2_08810 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PADK2_16310 secretion protein XqhA K02453 gspD; general secretion pathway protein D
D PADK2_22225 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PADK2_08815 secretion protein XcpP K02452 gspC; general secretion pathway protein C
D PADK2_16315 XphA K02452 gspC; general secretion pathway protein C
D PADK2_22255 hypothetical protein K02452 gspC; general secretion pathway protein C
D PADK2_11270 putative type II secretion system protein K02455 gspF; general secretion pathway protein F
D PADK2_08825 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D PADK2_22215 putative type II secretion system protein K02455 gspF; general secretion pathway protein F
D PADK2_11275 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D PADK2_11280 putative type II secretion system protein K02456 gspG; general secretion pathway protein G
D PADK2_08830 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D PADK2_22245 HxcT pseudopilin K02456 gspG; general secretion pathway protein G
D PADK2_08835 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D PADK2_22260 HxcU putative pseudopilin K02457 gspH; general secretion pathway protein H
D PADK2_11285 type II secretion system protein K02458 gspI; general secretion pathway protein I
D PADK2_08840 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D PADK2_22250 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D PADK2_11290 putative type II secretion system protein K02459 gspJ; general secretion pathway protein J
D PADK2_08845 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D PADK2_22265 HxcW putative pseudopilin K02459 gspJ; general secretion pathway protein J
D PADK2_08850 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D PADK2_22240 putative type II secretion system protein K02460 gspK; general secretion pathway protein K
D PADK2_08855 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D PADK2_22235 type II secretion system protein K02461 gspL; general secretion pathway protein L
D PADK2_08860 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D PADK2_22230 type II secretion system protein K02462 gspM; general secretion pathway protein M
D PADK2_08820 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PADK2_22220 putative type II secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PADK2_27570 putative secretion pathway ATPase K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PADK2_23810 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PADK2_05220 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PADK2_05225 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PADK2_03290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PADK2_25205 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PADK2_03455 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PADK2_05215 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PADK2_29580 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PADK2_22945 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PADK2_01875 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PADK2_27135 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PADK2_05605 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PADK2_26835 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PADK2_26840 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PADK2_26845 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D PADK2_26945 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_01305 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_07815 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_18165 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_27860 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_11220 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_00495 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_00475 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_13400 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_00445 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_13435 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_01310 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_18160 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_27865 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_00420 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D PADK2_17375 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D PADK2_00405 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D PADK2_13465 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL
D PADK2_17360 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D PADK2_00410 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D PADK2_13460 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D PADK2_17365 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D PADK2_00470 putative ClpA/B-type chaperone K11907 vasG; type VI secretion system protein VasG
D PADK2_13415 ClpA/B-type protease K11907 vasG; type VI secretion system protein VasG
D PADK2_17395 putative ClpA/B-type protease K11907 vasG; type VI secretion system protein VasG
D PADK2_00390 serine/threonine-protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D PADK2_00425 hypothetical protein K11913 fha1; type VI secretion system protein
D PADK2_17355 serine/threonine phosphoprotein phosphatase Stp1 K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
D PADK2_00395 PppA K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pdk02020]
D PADK2_28540 two-component sensor PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PADK2_28535 two-component response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PADK2_07805 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PADK2_04775 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PADK2_12495 putative ABC-type periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PADK2_28580 phosphate ABC transporter, periplasmic phosphate-binding protein, PstS K02040 pstS; phosphate transport system substrate-binding protein
D PADK2_19745 two-component sensor PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PADK2_19750 two-component response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PADK2_00955 putative acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D PADK2_27515 AmgS K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PADK2_27520 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PADK2_08305 putative two-component response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PADK2_19855 two-component sensor K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PADK2_19860 two-component response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D PADK2_21860 serine protease MucD precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D PADK2_02330 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D PADK2_02325 DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D PADK2_12600 putative RND efflux membrane fusion protein precursor K07799 mdtA; membrane fusion protein, multidrug efflux system
D PADK2_12605 putative Resistance-Nodulation-Cell Division (RND) efflux transporter K07788 mdtB; multidrug efflux pump
D PADK2_12610 putative efflux transporter K07789 mdtC; multidrug efflux pump
D PADK2_06605 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D PADK2_11850 sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_12625 two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_10365 two-component sensor, CopS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_25920 putative two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_18535 putative two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_12630 putative two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_25915 two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_18540 putative two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_10370 two-component response regulator, CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_11845 transcriptional activator protein IrlR 2 K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_14425 RND family efflux transporter MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D PADK2_14430 CzcA family heavy metal efflux protein K07787 cusA; copper/silver efflux system protein
D PADK2_25355 PmrB: two-component regulator system signal sensor kinase PmrB K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PADK2_12845 putative two-component sensor K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PADK2_25350 two-component response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PADK2_12850 putative two-component response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PADK2_20220 flagellin type B K02406 fliC; flagellin
D PADK2_18450 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PADK2_26260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PADK2_18425 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PADK2_17530 two-component sensor KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PADK2_17525 two-component response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PADK2_17545 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PADK2_17540 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PADK2_17535 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PADK2_17550 kdbF; potassium-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit
D PADK2_21915 putative two-component sensor K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PADK2_21920 putative two-component response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D PADK2_21940 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PADK2_14620 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PADK2_21935 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PADK2_14615 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PADK2_21930 tricarboxylate transport protein TctC, putative K07795 tctC; putative tricarboxylic transport membrane protein
D PADK2_14610 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PADK2_00575 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PADK2_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PADK2_21105 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PADK2_16675 putative two-component sensor K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D PADK2_16670 putative two-component response regulator K18073 parR; two-component system, OmpR family, response regulator ParR
D PADK2_20900 Basic amino acid, basic peptide and imipenem outer membrane porin OprD precursor K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_00950 putative porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_11150 proline porin OpdB K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_15550 periplasmic multidrug efflux lipoprotein precursor K18094 mexX; membrane fusion protein, multidrug efflux system
D PADK2_15555 multidrug efflux protein K18095 mexY; multidrug efflux pump
D PADK2_05420 peptidase M15D, VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PADK2_21955 hypothetical protein K18346 vanW; vancomycin resistance protein VanW
D PADK2_11210 two-component sensor PfeS K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PADK2_21055 two-component sensor K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PADK2_21060 two-component response regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D PADK2_11215 two-component response regulator PfeR K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D PADK2_21050 outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor
D PADK2_11205 outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor
D PADK2_06905 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PADK2_27840 alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PADK2_27835 alginate biosynthesis regulatory protein AlgR K08083 algR; two-component system, LytTR family, response regulator AlgR
D PADK2_06665 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D PADK2_04945 two-component sensor NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PADK2_04940 transcriptional regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PADK2_13385 putative transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PADK2_04960 respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_04965 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_04975 respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_04970 respiratory nitrate reductase delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D PADK2_03925 putative response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PADK2_05770 putative two-component response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PADK2_09875 putative transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PADK2_21065 sensor/response regulator hybrid K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PADK2_11730 response regulator GacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PADK2_10940 carbon storage regulator K03563 csrA; carbon storage regulator
D PADK2_21175 carbon storage regulator K03563 csrA; carbon storage regulator
D PADK2_04595 two-component sensor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PADK2_12315 sensor/response regulator hybrid K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PADK2_00175 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_04585 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_09120 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_22370 two-component sensor PprA K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D PADK2_22385 two-component response regulator, PprB K27077 pprB; two-component system, NarL family, response regulator PprB
D PADK2_24695 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24700 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24720 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24705 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_15030 chaperone CupA2 K07346 fimC; fimbrial chaperone protein
D PADK2_24710 pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D PADK2_03905 usher CupB3 K07347 fimD; outer membrane usher protein
D PADK2_20775 usher CupC3 K07347 fimD; outer membrane usher protein
D PADK2_24715 hypothetical protein K07347 fimD; outer membrane usher protein
D PADK2_15025 usher CupA3 K07347 fimD; outer membrane usher protein
D PADK2_22435 type IVb pilin, Flp K02651 flp; pilus assembly protein Flp/PilA
D PADK2_22430 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PADK2_22425 putative type II secretion system protein K02280 cpaC; pilus assembly protein CpaC
D PADK2_22420 TadZ K02282 cpaE; pilus assembly protein CpaE
D PADK2_22415 TadA ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PADK2_22410 hypothetical protein K12510 tadB; tight adherence protein B
D PADK2_22405 TadC K12511 tadC; tight adherence protein C
D PADK2_22400 TadD K27079 tadD; tight adherence protein D
D PADK2_22390 TadG K27080 tadG; tight adherence protein G
D PADK2_06050 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PADK2_27115 two-component sensor NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PADK2_27120 two-component response regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PADK2_01470 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_01480 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_07490 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_15450 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_17885 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_27090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29350 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_25100 two-component response regulator CbrB K07713 zraR; two-component system, NtrC family, response regulator HydG
D PADK2_15640 putative short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_27330 two-component sensor K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PADK2_29300 MifS K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PADK2_27335 putative two-component response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PADK2_29295 putative two-component response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PADK2_00610 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D PADK2_19725 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D PADK2_24160 two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D PADK2_24165 two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D PADK2_23240 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PADK2_23560 type IV pilin structural subunit K02650 pilA; type IV pilus assembly protein PilA
D PADK2_29160 putative two-component sensor K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D PADK2_29155 two-component response regulator AlgB K11384 algB; two-component system, NtrC family, response regulator AlgB
D PADK2_00880 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PADK2_07530 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PADK2_00885 aerotaxis transducer Aer2 K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_00905 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_09770 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_12365 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_12415 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_11385 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_11395 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22355 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22455 chemotactic transducer PctA K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22460 chemotactic transducer PctB K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17475 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_26065 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_26855 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_19395 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_15985 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_23530 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_24610 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17670 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_18595 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17910 aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D PADK2_00890 putative purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_18405 putative purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_18410 putative CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_00895 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_18435 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_00900 putative two-component response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PADK2_18445 two-component response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PADK2_00870 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PADK2_18430 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PADK2_07525 putative chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PADK2_02075 methyltransferase PilK K02661 pilK; type IV pilus assembly protein PilK
D PADK2_02070 twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D PADK2_02065 twitching motility protein PilI K02659 pilI; twitching motility protein PilI
D PADK2_02080 putative component of chemotactic signal transduction system K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PADK2_02055 twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PADK2_02060 twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PADK2_02085 methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D PADK2_02090 chemotaxis protein K06598 chpC; chemosensory pili system protein ChpC
D PADK2_05810 putative protein methyltransferase K13486 wspC; chemotaxis protein methyltransferase WspC
D PADK2_05800 putative chemotaxis transducer K13487 wspA; methyl-accepting chemotaxis protein WspA
D PADK2_05805 hypothetical protein K13488 wspB; chemotaxis-related protein WspB
D PADK2_05815 CheW domain protein K13489 wspD; chemotaxis-related protein WspD
D PADK2_05820 chemotaxis sensor/effector fusion protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PADK2_05825 chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D PADK2_05830 putative two-component response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D PADK2_21280 C4-dicarboxylate-binding periplasmic protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PADK2_27340 putative c4-dicarboxylate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PADK2_24520 putative c4-dicarboxylate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PADK2_21275 putative C4-dicarboxylate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PADK2_27345 putative dicarboxylate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PADK2_27350 putative C4-dicarboxylate transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PADK2_21270 putative C4-dicarboxylate transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PADK2_03690 putative two-component response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D PADK2_20195 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PADK2_20190 two-component sensor K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PADK2_20185 two-component response regulator K10943 flrC; two-component system, response regulator FlrC
D PADK2_18960 putative two-component sensor K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D PADK2_18965 putative two-component response regulator K17061 aauR; two-component system, response regulator AauR
D PADK2_18945 putative ATP-binding component of ABC transporter K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_18940 putative permease of ABC transporter K10002 gltK; glutamate/aspartate transport system permease protein
D PADK2_18935 putative permease of ABC transporter K10003 gltJ; glutamate/aspartate transport system permease protein
D PADK2_18930 putative binding protein component of ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PADK2_18955 glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D PADK2_03185 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_01365 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_10325 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_17520 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PADK2_23400 putative two-component sensor K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PADK2_23395 putative two-component response regulator K15012 regA; two-component system, response regulator RegA
D PADK2_23085 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PADK2_23080 putative cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PADK2_23075 putative cytochrome c1 precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PADK2_02605 cytochrome c-551 precursor K08738 CYC; cytochrome c
D PADK2_16375 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PADK2_17925 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PADK2_17945 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PADK2_17930 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PADK2_17950 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PADK2_17935 putative cytochrome c oxidase subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PADK2_17955 putative cytochrome c oxidase subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PADK2_17940 putative cytochrome c K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PADK2_17960 putative cytochrome c K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PADK2_04675 cyanide insensitive terminal oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PADK2_04680 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PADK2_26360 putative outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_24390 outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_09465 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PADK2_08545 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PADK2_08550 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PADK2_06880 autoinducer synthesis protein RhlI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PADK2_04830 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_15395 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_02375 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_16080 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_12905 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_13325 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_04825 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_16085 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_19135 transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_07220 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_15390 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_02370 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_00760 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_12910 transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_15180 putative transmembrane sensor K07165 fecR; transmembrane sensor
D PADK2_10255 sensor/response regulator hybrid K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D PADK2_17655 putative sensor/response regulator hybrid K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PADK2_15775 putative two-component sensor K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PADK2_07545 putative histidine-containing phosphotransfer (HPt) domain K20976 hptB; histidine phosphotransfer protein HptB
D PADK2_20790 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D PADK2_07540 putative two-component response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D PADK2_07535 putative anti-sigma F factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D PADK2_07515 FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:pdk04148]
D PADK2_23525 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PADK2_23085 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pdk02024]
D PADK2_26210 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PADK2_18565 acyl-homoserine-lactone synthase K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PADK2_03070 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PADK2_20735 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PADK2_03170 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PADK2_20730 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PADK2_20760 coenzyme A ligase K18000 pqsA; anthranilate-CoA ligase [EC:6.2.1.32]
D PADK2_20755 beta-keto-acyl-acyl-carrier-like protein synthase K18001 pqsB; 2-heptyl-4(1H)-quinolone synthase subunit PqsB [EC:2.3.1.230]
D PADK2_20750 beta-keto-acyl-acyl-carrier-like protein synthase K18002 pqsC; 2-heptyl-4(1H)-quinolone synthase subunit PqsC [EC:2.3.1.230]
D PADK2_20745 3-oxoacyl-(acyl carrier protein) synthase III K18003 pqsD; anthraniloyl-CoA anthraniloyltransferase [EC:2.3.1.262]
D PADK2_20740 Quinolone signal response protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
D PADK2_11725 putative FAD-dependent monooxygenase K17940 pqsH; 2-heptyl-3-hydroxy-4(1H)-quinolone synthase [EC:1.14.13.182]
D PADK2_20725 Transcriptional regulator MvfR K19735 mvfR; LysR family transcriptional regulator, quorum-sensing system regulator MvfR
D PADK2_06880 autoinducer synthesis protein RhlI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PADK2_06875 transcriptional regulator RhlR K18099 rhlR; LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
D PADK2_06865 rhamnosyltransferase chain A K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D PADK2_06870 rhamnosyltransferase chain B K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D PADK2_20020 rhamnosyltransferase 2 K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D PADK2_16295 LasA protease precursor K08642 lasA; LasA protease [EC:3.4.24.-]
D PADK2_05720 elastase LasB K01399 lasB; pseudolysin [EC:3.4.24.26]
D PADK2_12380 LecA K20258 lecA; PA-I galactophilic lectin
D PADK2_12385 hypothetical protein K20259 lecB; PA-IIL fucose-binding lectin
D PADK2_03620 phenazine biosynthesis protein K20260 phzA_B; phenazine biosynthesis protein
D PADK2_16150 phenazine biosynthesis protein K20260 phzA_B; phenazine biosynthesis protein
D PADK2_16155 putative phenazine biosynthesis protein K20260 phzA_B; phenazine biosynthesis protein
D PADK2_03615 phenazine biosynthesis protein K20260 phzA_B; phenazine biosynthesis protein
D PADK2_10160 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_03610 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_09645 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_16145 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_16940 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PADK2_16140 phenazine biosynthesis protein PhzD K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15]
D PADK2_03605 phenazine biosynthesis protein PhzD K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15]
D PADK2_03600 phenazine biosynthesis protein PhzE K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D PADK2_16135 phenazine biosynthesis protein PhzE K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D PADK2_16130 putative phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D PADK2_03595 putative phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D PADK2_03590 pyrodoxamine 5'-phosphate oxidase K20262 phzG; dihydrophenazinedicarboxylate synthase [EC:1.10.3.16]
D PADK2_25355 PmrB: two-component regulator system signal sensor kinase PmrB K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PADK2_12845 putative two-component sensor K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PADK2_25350 two-component response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PADK2_12850 putative two-component response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PADK2_17525 two-component response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PADK2_25495 putative amino acid permease K20265 gadC; glutamate:GABA antiporter
D PADK2_22090 hypothetical protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D PADK2_19990 transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D PADK2_08075 putative ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_03035 putative binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_03045 putative binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_01095 putative binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_26420 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_03055 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PADK2_08060 putative permease of ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PADK2_08065 putative permease of ABC transporter K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PADK2_03050 putative permease of ABC transporter K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PADK2_08055 putative ATP-binding component of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PADK2_03040 putative ATP-binding component of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PADK2_07450 aliphatic amidase expression-regulating protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_26055 putative binding protein component of ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_20310 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_26050 putative permease of ABC branched chain amino acid transporter K01997 livH; branched-chain amino acid transport system permease protein
D PADK2_20315 branched-chain amino acid transport protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D PADK2_26045 putative permease of ABC branched-chain amino acid transporter K01998 livM; branched-chain amino acid transport system permease protein
D PADK2_20320 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PADK2_26040 putative ATP-binding component of ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PADK2_20325 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PADK2_20330 branched-chain amino acid transport protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PADK2_26035 putative ATP-binding component of ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PADK2_16280 hypothetical protein K20276 bapA; large repetitive protein
D PADK2_07465 fucose-binding lectin PA-IIL K20277 bcl; mannose-binding lectin
D PADK2_07785 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_07790 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_17625 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_03185 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_01365 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_10325 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_29235 transcriptional regulator np20 K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PADK2_04090 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PADK2_04045 riboflavin-specific deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PADK2_07670 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PADK2_25555 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PADK2_03640 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K18306 mexH; membrane fusion protein, multidrug efflux system
D PADK2_03635 putative Resistance-Nodulation-Cell Division (RND) efflux transporter K18307 mexI; multidrug efflux pump
D PADK2_02155 Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D PADK2_29580 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PADK2_03290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PADK2_25205 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PADK2_03455 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PADK2_05215 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PADK2_22945 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PADK2_01875 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PADK2_27135 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PADK2_05605 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PADK2_07675 non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D PADK2_21485 hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa [PATH:pdk02025]
D PADK2_02070 twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D PADK2_02065 twitching motility protein PilI K02659 pilI; twitching motility protein PilI
D PADK2_02080 putative component of chemotactic signal transduction system K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PADK2_02090 chemotaxis protein K06598 chpC; chemosensory pili system protein ChpC
D PADK2_02060 twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PADK2_02055 twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PADK2_08240 CyaB K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PADK2_26335 putative phosphohydrolase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PADK2_03185 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_01365 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_10325 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_20195 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PADK2_17130 transcriptional regulator ExsA K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D PADK2_18565 acyl-homoserine-lactone synthase K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PADK2_06880 autoinducer synthesis protein RhlI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PADK2_06875 transcriptional regulator RhlR K18099 rhlR; LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
D PADK2_06865 rhamnosyltransferase chain A K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D PADK2_06870 rhamnosyltransferase chain B K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D PADK2_20020 rhamnosyltransferase 2 K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D PADK2_12380 LecA K20258 lecA; PA-I galactophilic lectin
D PADK2_12385 hypothetical protein K20259 lecB; PA-IIL fucose-binding lectin
D PADK2_03070 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PADK2_20735 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PADK2_03170 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PADK2_20730 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PADK2_20760 coenzyme A ligase K18000 pqsA; anthranilate-CoA ligase [EC:6.2.1.32]
D PADK2_20755 beta-keto-acyl-acyl-carrier-like protein synthase K18001 pqsB; 2-heptyl-4(1H)-quinolone synthase subunit PqsB [EC:2.3.1.230]
D PADK2_20750 beta-keto-acyl-acyl-carrier-like protein synthase K18002 pqsC; 2-heptyl-4(1H)-quinolone synthase subunit PqsC [EC:2.3.1.230]
D PADK2_20745 3-oxoacyl-(acyl carrier protein) synthase III K18003 pqsD; anthraniloyl-CoA anthraniloyltransferase [EC:2.3.1.262]
D PADK2_20740 Quinolone signal response protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
D PADK2_11725 putative FAD-dependent monooxygenase K17940 pqsH; 2-heptyl-3-hydroxy-4(1H)-quinolone synthase [EC:1.14.13.182]
D PADK2_20725 Transcriptional regulator MvfR K19735 mvfR; LysR family transcriptional regulator, quorum-sensing system regulator MvfR
D PADK2_21065 sensor/response regulator hybrid K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PADK2_04450 Lost Adherence Sensor, LadS K20971 ladS; two-component system, sensor histidine kinase LadS
D PADK2_25765 RetS (Regulator of Exopolysaccharide and Type III Secretion) K20972 retS; two-component system, sensor histidine kinase RetS
D PADK2_06950 putative sensor/response regulator hybrid K20972 retS; two-component system, sensor histidine kinase RetS
D PADK2_11730 response regulator GacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PADK2_10940 carbon storage regulator K03563 csrA; carbon storage regulator
D PADK2_21175 carbon storage regulator K03563 csrA; carbon storage regulator
D PADK2_10255 sensor/response regulator hybrid K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D PADK2_17655 putative sensor/response regulator hybrid K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PADK2_15775 putative two-component sensor K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PADK2_07545 putative histidine-containing phosphotransfer (HPt) domain K20976 hptB; histidine phosphotransfer protein HptB
D PADK2_20790 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D PADK2_07540 putative two-component response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D PADK2_07535 putative anti-sigma F factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D PADK2_07515 FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PADK2_18450 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PADK2_00390 serine/threonine-protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D PADK2_17355 serine/threonine phosphoprotein phosphatase Stp1 K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
D PADK2_00395 PppA K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
D PADK2_00400 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM
D PADK2_00405 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D PADK2_13465 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL
D PADK2_17360 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D PADK2_00415 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D PADK2_13455 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D PADK2_17370 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D PADK2_00425 hypothetical protein K11913 fha1; type VI secretion system protein
D PADK2_00430 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D PADK2_13470 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D PADK2_00435 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D PADK2_13445 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D PADK2_17420 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D PADK2_00440 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D PADK2_13440 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D PADK2_17415 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D PADK2_00445 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_13435 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_01310 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_18160 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_27865 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_00465 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D PADK2_13420 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D PADK2_17400 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D PADK2_00470 putative ClpA/B-type chaperone K11907 vasG; type VI secretion system protein VasG
D PADK2_13415 ClpA/B-type protease K11907 vasG; type VI secretion system protein VasG
D PADK2_17395 putative ClpA/B-type protease K11907 vasG; type VI secretion system protein VasG
D PADK2_05800 putative chemotaxis transducer K13487 wspA; methyl-accepting chemotaxis protein WspA
D PADK2_05820 chemotaxis sensor/effector fusion protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PADK2_05805 hypothetical protein K13488 wspB; chemotaxis-related protein WspB
D PADK2_05815 CheW domain protein K13489 wspD; chemotaxis-related protein WspD
D PADK2_05825 chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D PADK2_05830 putative two-component response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D PADK2_22575 hypothetical protein K21019 sadC; diguanylate cyclase [EC:2.7.7.65]
D PADK2_00850 hypothetical protein K21020 siaD; diguanylate cyclase [EC:2.7.7.65]
D PADK2_20070 hypothetical protein K21021 tpbB; diguanylate cyclase [EC:2.7.7.65]
D PADK2_20145 hypothetical protein K21022 roeA; diguanylate cyclase [EC:2.7.7.65]
D PADK2_17060 MucR K21023 mucR; diguanylate cyclase [EC:2.7.7.65]
D PADK2_22755 putative GGDEF domain/EAL domain protein K21024 bifA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PADK2_14110 putative glycosyl transferase K20997 pslA; polysaccharide biosynthesis protein PslA
D PADK2_06610 phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_14105 putative phosphomannose isomerase/GDP-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_29005 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PADK2_14100 putative glycosyl transferase K25205 pslC; polysaccharide biosynthesis protein PslC
D PADK2_14095 putative exopolysaccharide transporter K20987 pslD; polysaccharide biosynthesis/export protein PslD
D PADK2_14090 hypothetical protein K20998 pslE; polysaccharide biosynthesis protein PslE
D PADK2_14085 putative glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH
D PADK2_14080 putative transferase K21002 pslI; polysaccharide biosynthesis protein PslI
D PADK2_14075 hypothetical protein K21003 pslJ; polysaccharide biosynthesis protein PslJ
D PADK2_14070 hypothetical protein K21004 pslK; polysaccharide biosynthesis protein PslK
D PADK2_14065 hypothetical protein K21005 pslL; polysaccharide biosynthesis protein PslL
D PADK2_09015 hypothetical protein K21006 pelA; polysaccharide biosynthesis protein PelA
D PADK2_09020 PelB K21007 pelB; polysaccharide biosynthesis protein PelB
D PADK2_09025 putative lipoprotein K21008 pelC; polysaccharide biosynthesis protein PelC
D PADK2_09030 hypothetical protein K21009 pelD; polysaccharide biosynthesis protein PelD
D PADK2_09035 hypothetical protein K21010 pelE; polysaccharide biosynthesis protein PelE
D PADK2_09040 hypothetical protein K21011 pelF; polysaccharide biosynthesis protein PelF
D PADK2_09045 PelG K21012 pelG; polysaccharide biosynthesis protein PelG
D PADK2_06655 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D PADK2_26285 FimX K21025 fimX; multidomain signaling protein FimX
D PADK2_26280 hypothetical protein K23127 fimW; cyclic-di-GMP-binding protein
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pdk02030]
D PADK2_00885 aerotaxis transducer Aer2 K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_00905 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_09770 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_12365 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_12415 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_11385 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_11395 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22355 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22455 chemotactic transducer PctA K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22460 chemotactic transducer PctB K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17475 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_26065 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_26855 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_19395 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_15985 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_23530 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_24610 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17670 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_18595 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17910 aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D PADK2_15925 binding protein component precursor of ABC ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D PADK2_28320 putative binding protein component of ABC dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23440 putative binding protein component of ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23410 putative binding protein component of ABC transpor K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23415 ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23430 putative binding protein component of ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_00895 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_18435 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_00890 putative purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_18405 putative purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_18410 putative CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_00900 putative two-component response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PADK2_18445 two-component response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PADK2_18440 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D PADK2_00870 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PADK2_18430 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PADK2_07525 putative chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PADK2_00875 putative chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PADK2_00880 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PADK2_07530 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PADK2_20170 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PADK2_18510 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PADK2_18505 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PADK2_26260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PADK2_18425 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PADK2_26255 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PADK2_18420 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pdk02040]
D PADK2_20180 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PADK2_20175 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PADK2_20170 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PADK2_20165 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D PADK2_20160 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PADK2_20155 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D PADK2_18520 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PADK2_18515 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PADK2_27690 flagellar basal body-associated protein FliL-like protein K02415 fliL; flagellar protein FliL
D PADK2_18510 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PADK2_18505 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PADK2_18500 flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PADK2_18495 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PADK2_18490 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PADK2_18485 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PADK2_18465 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PADK2_18480 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PADK2_07520 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PADK2_20295 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PADK2_20290 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PADK2_20285 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PADK2_20280 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PADK2_20275 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PADK2_20270 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PADK2_20265 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D PADK2_20260 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D PADK2_20255 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PADK2_20250 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PADK2_20245 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PADK2_06735 putative outer membrane protein precursor K21218 motY; sodium-type flagellar protein MotY
D PADK2_20220 flagellin type B K02406 fliC; flagellin
D PADK2_20210 flagellar capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D PADK2_20205 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D PADK2_20200 hypothetical protein K02423 fliT; flagellar protein FliT
D PADK2_26260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PADK2_18425 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PADK2_26255 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PADK2_18420 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D PADK2_07515 FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PADK2_07510 putative export chaperone involved in flagellar synthesis K02399 flgN; flagellar biosynthesis protein FlgN
D PADK2_01565 L-cysteine transporter of ABC system FliY K02424 tcyA; L-cystine transport system substrate-binding protein
D PADK2_02905 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PADK2_20195 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PADK2_23240 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PADK2_20185 two-component response regulator K10943 flrC; two-component system, response regulator FlrC
D PADK2_18450 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PADK2_06165 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pdk04980]
D PADK2_22925 putative cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PADK2_16440 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pdk01501]
D PADK2_20900 Basic amino acid, basic peptide and imipenem outer membrane porin OprD precursor K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_00950 putative porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_11150 proline porin OpdB K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_22895 putative permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PADK2_03580 putative transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PADK2_09320 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PADK2_03770 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D PADK2_16675 putative two-component sensor K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D PADK2_16670 putative two-component response regulator K18073 parR; two-component system, OmpR family, response regulator ParR
D PADK2_29100 hypothetical protein K18148 rtcB; release factor H-coupled RctB family protein
D PADK2_15545 transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D PADK2_15550 periplasmic multidrug efflux lipoprotein precursor K18094 mexX; membrane fusion protein, multidrug efflux system
D PADK2_15555 multidrug efflux protein K18095 mexY; multidrug efflux pump
D PADK2_05735 putative transcriptional regulator K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC
D PADK2_05745 hypothetical protein K18150 armR; antirepressor for MexR
D PADK2_02135 multidrug resistance operon repressor MexR K18131 mexR; MarR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D PADK2_06480 TetR family transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D PADK2_22790 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PADK2_02150 RND multidrug efflux transporter MexB K18138 acrB; multidrug efflux pump
D PADK2_22795 multidrug efflux protein K18138 acrB; multidrug efflux pump
D PADK2_02155 Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D PADK2_26360 putative outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_24390 outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_26720 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PADK2_04310 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PADK2_13915 penicillin-binding protein 3A K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PADK2_23020 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PADK2_03765 ampC; beta-lactamase/D-alanine carboxypeptidase K20320 blaPDC; beta-lactamase class C PDC [EC:3.5.2.6]
D PADK2_29310 putative beta-lactamase K18973 blaOXA-50; beta-lactamase class D OXA-50 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:pdk01502]
D PADK2_05420 peptidase M15D, VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PADK2_03665 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PADK2_22980 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PADK2_26140 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PADK2_28245 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PADK2_23010 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PADK2_23005 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PADK2_22990 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PADK2_21955 hypothetical protein K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pdk01503]
D PADK2_19745 two-component sensor PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PADK2_19750 two-component response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PADK2_16675 putative two-component sensor K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D PADK2_16670 putative two-component response regulator K18073 parR; two-component system, OmpR family, response regulator ParR
D PADK2_06605 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D PADK2_06600 putative glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D PADK2_06595 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D PADK2_06590 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D PADK2_06585 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PADK2_06580 putative inner membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D PADK2_06575 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D PADK2_07720 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PADK2_15795 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PADK2_05720 elastase LasB K01399 lasB; pseudolysin [EC:3.4.24.26]
D PADK2_19405 alkaline metalloproteinase precursor K01406 prtC; serralysin [EC:3.4.24.40]
D PADK2_08305 putative two-component response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PADK2_26225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PADK2_29430 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PADK2_21860 serine protease MucD precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D PADK2_29185 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PADK2_08190 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PADK2_22790 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PADK2_02150 RND multidrug efflux transporter MexB K18138 acrB; multidrug efflux pump
D PADK2_22795 multidrug efflux protein K18138 acrB; multidrug efflux pump
D PADK2_26360 putative outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_24390 outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_06120 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PADK2_21105 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pdk01000]
C 01001 Protein kinases [BR:pdk01001]
D PADK2_25375 putative serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PADK2_00390 serine/threonine-protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D PADK2_28540 two-component sensor PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PADK2_19745 two-component sensor PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PADK2_27515 AmgS K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PADK2_19855 two-component sensor K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PADK2_02330 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D PADK2_11850 sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_12625 two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_10365 two-component sensor, CopS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_25920 putative two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_18535 putative two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_25355 PmrB: two-component regulator system signal sensor kinase PmrB K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PADK2_12845 putative two-component sensor K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PADK2_17530 two-component sensor KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PADK2_21915 putative two-component sensor K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PADK2_16675 putative two-component sensor K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D PADK2_11210 two-component sensor PfeS K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PADK2_21055 two-component sensor K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PADK2_08295 putative two-component sensor K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PADK2_04945 two-component sensor NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PADK2_21065 sensor/response regulator hybrid K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PADK2_04595 two-component sensor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PADK2_12315 sensor/response regulator hybrid K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PADK2_22370 two-component sensor PprA K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D PADK2_27840 alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PADK2_27115 two-component sensor NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PADK2_24160 two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D PADK2_27330 two-component sensor K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PADK2_29300 MifS K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PADK2_29160 putative two-component sensor K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D PADK2_12375 putative two-component sensor K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D PADK2_00895 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_18435 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_02080 putative component of chemotactic signal transduction system K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PADK2_05820 chemotaxis sensor/effector fusion protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PADK2_20190 two-component sensor K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PADK2_23400 putative two-component sensor K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PADK2_10255 sensor/response regulator hybrid K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D PADK2_17655 putative sensor/response regulator hybrid K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PADK2_15775 putative two-component sensor K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PADK2_04450 Lost Adherence Sensor, LadS K20971 ladS; two-component system, sensor histidine kinase LadS
D PADK2_25765 RetS (Regulator of Exopolysaccharide and Type III Secretion) K20972 retS; two-component system, sensor histidine kinase RetS
D PADK2_06950 putative sensor/response regulator hybrid K20972 retS; two-component system, sensor histidine kinase RetS
C 01009 Protein phosphatases and associated proteins [BR:pdk01009]
D PADK2_02180 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PADK2_17730 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PADK2_20340 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D PADK2_26290 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pdk01002]
D PADK2_12225 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PADK2_24225 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PADK2_23590 type 4 prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PADK2_22380 Flp prepilin peptidase A, FppA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PADK2_05485 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PADK2_01475 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D PADK2_06900 putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D PADK2_08795 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PADK2_26675 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PADK2_05540 putative aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PADK2_29485 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PADK2_00280 putative phenazine-modifying enzyme K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PADK2_06965 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PADK2_15230 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PADK2_19995 chaperone protein HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D PADK2_01780 protease PfpI K05520 yhbO; deglycase [EC:3.5.1.124]
D PADK2_22595 hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124]
D PADK2_10105 putative ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D PADK2_09950 putative protease K07052 K07052; CAAX protease family protein
D PADK2_27155 hypothetical protein K07052 K07052; CAAX protease family protein
D PADK2_08920 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PADK2_00355 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PADK2_05720 elastase LasB K01399 lasB; pseudolysin [EC:3.4.24.26]
D PADK2_19405 alkaline metalloproteinase precursor K01406 prtC; serralysin [EC:3.4.24.40]
D PADK2_05420 peptidase M15D, VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PADK2_01870 putative zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D PADK2_01865 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PADK2_05165 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PADK2_28715 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PADK2_10495 glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PADK2_19835 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PADK2_09760 putative hydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D PADK2_22635 putative hydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D PADK2_16295 LasA protease precursor K08642 lasA; LasA protease [EC:3.4.24.-]
D PADK2_29495 hypothetical protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D PADK2_06055 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PADK2_10750 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PADK2_23420 metallopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PADK2_27640 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PADK2_25225 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PADK2_10225 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PADK2_01375 putative Zn-dependent protease with chaperone function K07387 K07387; metalloprotease [EC:3.4.24.-]
D PADK2_20715 Putative Zn-dependent protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PADK2_06095 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PADK2_02880 hypothetical protein K21429 impA; immunomodulating metalloprotease
D PADK2_04175 hypothetical protein K09933 mtfA; MtfA peptidase
D PADK2_18290 hypothetical protein K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D PADK2_21860 serine protease MucD precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D PADK2_23160 AlgW protein K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D PADK2_19120 putative oligopeptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PADK2_04330 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PADK2_21355 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D PADK2_09110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PADK2_07640 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PADK2_16660 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PADK2_16650 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PADK2_21795 putative ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PADK2_09310 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PADK2_19125 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PADK2_21850 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PADK2_26895 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PADK2_08040 periplasmic tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PADK2_27165 putative carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PADK2_01515 putative penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PADK2_16185 hypothetical protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PADK2_09490 putative peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D PADK2_16505 putative inner membrane peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D PADK2_08905 rhomboid family protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D PADK2_27510 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PADK2_26760 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PADK2_00825 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_01810 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_18950 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PADK2_28940 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PADK2_04765 putative protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D PADK2_04760 putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D PADK2_23290 PmbA protein K03592 pmbA; PmbA protein
D PADK2_23300 putative tldD protein K03568 tldD; TldD protein
D PADK2_10685 ecotin K08276 eco; ecotin
D PADK2_23375 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D PADK2_26195 protease subunit HflC K04087 hflC; modulator of FtsH protease HflC
D PADK2_26200 protease subunit HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pdk01003]
D PADK2_22465 hypothetical protein K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D PADK2_14840 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PADK2_01900 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PADK2_24965 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PADK2_26720 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PADK2_06865 rhamnosyltransferase chain A K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D PADK2_06870 rhamnosyltransferase chain B K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D PADK2_14085 putative glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH
D PADK2_14080 putative transferase K21002 pslI; polysaccharide biosynthesis protein PslI
D PADK2_06660 alginate biosynthesis protein Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D PADK2_09040 hypothetical protein K21011 pelF; polysaccharide biosynthesis protein PelF
D PADK2_26880 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pdk01005]
D PADK2_06120 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PADK2_06125 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PADK2_22960 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PADK2_06110 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PADK2_16720 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PADK2_09450 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PADK2_00055 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PADK2_08115 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PADK2_23490 lipopolysaccharide biosynthetic protein LpxO1 K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D PADK2_26435 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PADK2_06585 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D PADK2_24760 Lipid A 3-O-deacylase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PADK2_07720 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PADK2_15795 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PADK2_06160 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PADK2_09460 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PADK2_23220 putative phophatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PADK2_23215 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PADK2_26550 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PADK2_26555 ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PADK2_26545 UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D PADK2_26540 lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D PADK2_23515 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PADK2_22110 glycosyl transferase K12987 migA; alpha-1,6-rhamnosyltransferase [EC:2.4.1.-]
D PADK2_20635 glycosyl transferase K12987 migA; alpha-1,6-rhamnosyltransferase [EC:2.4.1.-]
D PADK2_26495 putative glycosyl transferase K12988 wapR; alpha-1,3-rhamnosyltransferase [EC:2.4.1.-]
D PADK2_23055 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PADK2_00030 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PADK2_26475 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PADK2_07585 ADP-L-glycero-D-mannoheptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PADK2_08620 glycosyl transferase WbpL K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D PADK2_28990 glycosyltransferase WbpX K24655 wbpX; O-antigen biosynthesis alpha-1,2-rhamnosyltransferase [EC:2.4.1.-]
D PADK2_28985 glycosyltransferase WbpY K24656 wbpY; O-antigen biosynthesis alpha-1,3-rhamnosyltransferase [EC:2.4.1.-]
D PADK2_28980 glycosyltransferase WbpZ K24657 wbpZ; O-antigen biosynthesis rhamnosyltransferase [EC:2.4.1.-]
D PADK2_20020 rhamnosyltransferase 2 K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D PADK2_08540 O-antigen chain length regulator K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D PADK2_25575 putative glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pdk01011]
D PADK2_23180 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PADK2_09470 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PADK2_22985 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PADK2_23000 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PADK2_23015 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PADK2_03665 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PADK2_22980 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PADK2_26140 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PADK2_28245 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PADK2_24765 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PADK2_27510 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PADK2_23005 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PADK2_22990 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PADK2_15860 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PADK2_24240 putative virulence factor, membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D PADK2_26720 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PADK2_24965 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PADK2_04310 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PADK2_13915 penicillin-binding protein 3A K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PADK2_23020 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PADK2_04330 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PADK2_09110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PADK2_21355 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D PADK2_01900 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PADK2_10105 putative ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D PADK2_05420 peptidase M15D, VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PADK2_06900 putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D PADK2_29495 hypothetical protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D PADK2_09245 soluble lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PADK2_19530 membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D PADK2_04320 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PADK2_04360 putative murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PADK2_23150 murein hydrolase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PADK2_16605 membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PADK2_05515 membrane-bound lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D PADK2_09540 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PADK2_04325 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PADK2_23355 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PADK2_26225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PADK2_29430 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PADK2_29165 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PADK2_23540 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pdk01004]
D PADK2_09515 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PADK2_07605 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PADK2_27380 putative beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D PADK2_00510 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PADK2_17665 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PADK2_09530 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PADK2_18795 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PADK2_00915 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_03880 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_09520 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_25405 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_18375 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_22870 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_29360 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PADK2_17660 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PADK2_06115 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PADK2_16635 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PADK2_09605 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PADK2_02385 putative thioesterase K17362 ACOT13; acyl-coenzyme A thioesterase 13 [EC:3.1.2.-]
D PADK2_10095 acyl-CoA thioesterase I precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PADK2_04615 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PADK2_28590 putative long-chain acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D PADK2_01420 delta-9 fatty acid desaturase, DesA K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PADK2_25930 hypothetical protein K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D PADK2_12455 putative AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_25135 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_21265 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PADK2_06510 putative acetyl-coa synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PADK2_15665 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D PADK2_26380 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PADK2_20610 pimeloyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PADK2_09905 long-chain-acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D PADK2_07785 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_07790 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_17625 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_12445 AMP-binding domain protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PADK2_05015 AMP-binding domain protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PADK2_05975 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PADK2_09510 putative phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PADK2_02930 putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PADK2_00025 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pdk01008]
D PADK2_13210 putative MbtH-like protein K05375 mbtH; MbtH protein
D PADK2_13745 AmbB K25233 ambB; L-alanine---[L-alanyl-carrier protein] ligase [EC:6.2.1.67]
D PADK2_13760 AmbE K25234 ambE; L-glutamate---[L-glutamyl-carrier protein] ligase [EC:6.2.1.68]
D PADK2_19820 PcpS K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D PADK2_03530 pyochelin biosynthesis protein PchD K12238 pchD; salicylate---[aryl-carrier protein] ligase [EC:6.2.1.61]
D PADK2_03540 dihydroaeruginoic acid synthetase K12239 pchE; L-cysteine---[L-cysteinyl-carrier protein] ligase PchE [EC:6.2.1.69]
D PADK2_03545 pyochelin synthetase K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D PADK2_03550 pyochelin biosynthetic protein PchG K12241 pchG; pyochelin biosynthesis protein PchG
D PADK2_03525 pyochelin biosynthetic protein PchC K12242 pchC; pyochelin biosynthesis protein PchC
C 01006 Prenyltransferases [BR:pdk01006]
D PADK2_04110 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PADK2_24275 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PADK2_06080 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PADK2_26215 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PADK2_28525 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PADK2_00580 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PADK2_19035 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pdk01007]
D PADK2_08660 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PADK2_16710 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PADK2_25090 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PADK2_03265 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PADK2_23125 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PADK2_16705 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PADK2_26750 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PADK2_06850 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PADK2_24230 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PADK2_05150 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PADK2_04385 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PADK2_05840 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PADK2_20875 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PADK2_05315 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PADK2_00045 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PADK2_00040 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PADK2_11600 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PADK2_20910 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PADK2_10785 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PADK2_21185 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PADK2_10805 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PADK2_10810 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PADK2_21350 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PADK2_10235 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PADK2_25040 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D PADK2_08635 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PADK2_05335 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D PADK2_26370 Arginine:Pyruvate Transaminase, AruH K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D PADK2_06045 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D PADK2_12585 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_08510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_23165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PADK2_02520 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PADK2_00675 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PADK2_28300 omega amino acid--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PADK2_01320 4-aminobutyrate aminotransferase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D PADK2_02675 putative class III pyridoxal phosphate-dependent aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PADK2_21225 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D PADK2_13205 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PADK2_01485 putative aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PADK2_01090 putative aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PADK2_02115 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PADK2_03885 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PADK2_04435 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PADK2_29355 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PADK2_26560 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PADK2_19090 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D PADK2_08500 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PADK2_06605 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pdk00194]
D PADK2_29505 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PADK2_29510 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PADK2_29515 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PADK2_29520 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PADK2_29525 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PADK2_29530 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PADK2_29535 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PADK2_29540 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PADK2_29545 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pdk03000]
D PADK2_02095 putative transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD
D PADK2_03535 transcriptional regulator PchR K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D PADK2_01230 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PADK2_02840 putative transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D PADK2_13610 putative transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D PADK2_17130 transcriptional regulator ExsA K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D PADK2_04835 putative transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D PADK2_11170 putative transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D PADK2_06360 methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PADK2_15095 O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PADK2_28680 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D PADK2_21235 transcriptional regulator ArgR K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D PADK2_28635 putative transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D PADK2_28200 putative transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PADK2_05090 putative transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PADK2_19720 putative transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PADK2_13350 putative transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PADK2_26060 putative transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PADK2_21770 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PADK2_00770 transcriptional regulator PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D PADK2_06405 transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PADK2_28455 putative transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PADK2_22735 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D PADK2_15375 DNA-binding transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D PADK2_16915 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D PADK2_01065 putative transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D PADK2_09765 putative transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D PADK2_15660 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D PADK2_03770 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D PADK2_12785 transcriptional regulator MexT K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PADK2_15365 putative transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D PADK2_20725 Transcriptional regulator MvfR K19735 mvfR; LysR family transcriptional regulator, quorum-sensing system regulator MvfR
D PADK2_28875 putative transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D PADK2_00680 putative transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D PADK2_28920 putative transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D PADK2_12695 transcriptional regulator CatR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D PADK2_16390 putative transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D PADK2_00190 transcriptional regulator TrpI K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
D PADK2_06425 glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PADK2_18270 putative transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PADK2_15910 ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PADK2_13980 transcriptional regulator PtxS K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D PADK2_06550 DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D PADK2_13675 transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D PADK2_07365 putative transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D PADK2_27020 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PADK2_05550 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PADK2_13775 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D PADK2_25315 putative transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PADK2_00615 putative transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PADK2_28515 DNA-binding transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D PADK2_01330 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PADK2_28890 putative transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PADK2_26020 putative transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D PADK2_28605 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D PADK2_16335 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PADK2_00840 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PADK2_02200 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PADK2_18200 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PADK2_21510 putative transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PADK2_14675 putative transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PADK2_10615 putative transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PADK2_25640 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PADK2_05950 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D PADK2_15545 transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D PADK2_05735 putative transcriptional regulator K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC
D PADK2_06480 TetR family transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D PADK2_24435 transcriptional regulator NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D PADK2_25940 DesT K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D PADK2_09945 putative transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D PADK2_04500 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_28275 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_12345 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_25395 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_23470 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_14045 transcriptional regulator BkdR K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_15505 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PADK2_06875 transcriptional regulator RhlR K18099 rhlR; LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
D PADK2_19990 transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D PADK2_04720 putative transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D PADK2_16890 putative transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D PADK2_01255 transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D PADK2_07565 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PADK2_28080 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D PADK2_02135 multidrug resistance operon repressor MexR K18131 mexR; MarR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D PADK2_17695 putative transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D PADK2_10130 putative transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PADK2_10250 putative transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PADK2_12185 Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D PADK2_25360 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PADK2_13910 putative transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D PADK2_24750 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D PADK2_25290 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PADK2_13345 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PADK2_29235 transcriptional regulator np20 K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PADK2_01165 putative transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D PADK2_00785 transcriptional regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D PADK2_03185 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_01365 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_10325 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PADK2_18000 transcriptional regulator Anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PADK2_02650 transcriptional regulator Dnr K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D PADK2_05250 putative Rrf2 family protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PADK2_13890 ArsR protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PADK2_28115 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PADK2_11855 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PADK2_28110 ArsR family transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PADK2_11880 PadR-like family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D PADK2_28930 putative transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D PADK2_08415 DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D PADK2_03270 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PADK2_25750 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PADK2_08025 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PADK2_20195 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PADK2_04220 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D PADK2_13475 transcriptional regulator K11917 sfa3; sigma-54 dependent transcriptional regulator
D PADK2_17390 transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator
D PADK2_11325 anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D PADK2_20435 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D PADK2_19660 putative transcriptional regulator K06714 rocR; arginine utilization regulatory protein
D PADK2_02450 putative molybdenum transport regulator K02019 modE; molybdate transport system regulatory protein
D PADK2_04995 hypothetical protein K21829 dauR; D-arginine utilization repressor
D PADK2_10505 hypothetical protein K07727 K07727; putative transcriptional regulator
D PADK2_28750 putative transcriptional regulator K07727 K07727; putative transcriptional regulator
D PADK2_03940 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D PADK2_21780 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PADK2_07315 regulatory protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D PADK2_21420 morphogene protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PADK2_11895 ParB domain-containing protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PADK2_29550 chromosome partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PADK2_21335 transcriptional regulator PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PADK2_12970 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PADK2_20695 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D PADK2_27900 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D PADK2_02030 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PADK2_12295 hypothetical protein K07733 alpA; prophage regulatory protein
D PADK2_02040 hypothetical protein K07735 algH; putative transcriptional regulator
D PADK2_25085 suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PADK2_29420 putative C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D PADK2_04040 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D PADK2_24335 transcriptional regulator RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D PADK2_23035 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pdk03021]
D PADK2_16325 putative DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PADK2_03480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PADK2_03320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PADK2_03325 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PADK2_28420 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PADK2_02905 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PADK2_06230 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D PADK2_19140 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PADK2_21885 algU; RNA polymerase sigma factor AlgU K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PADK2_07870 RNA polymerase ECF-subfamily sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PADK2_09890 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PADK2_16800 RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PADK2_18880 putative sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PADK2_04830 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_15395 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_02375 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_16080 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_12905 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PADK2_01890 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D PADK2_23240 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D PADK2_18450 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PADK2_07730 ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D PADK2_25195 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PADK2_04065 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PADK2_03295 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PADK2_23070 stringent starvation protein A K03599 sspA; stringent starvation protein A
D PADK2_23065 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D PADK2_10425 putative two-component response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PADK2_21870 sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D PADK2_21865 positive regulator for alginate biosynthesis MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D PADK2_25085 suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PADK2_29420 putative C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D PADK2_25245 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PADK2_10080 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D PADK2_27720 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PADK2_21000 hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:pdk03019]
D PADK2_09475 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PADK2_23315 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PADK2_21840 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PADK2_26175 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PADK2_26245 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PADK2_05010 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PADK2_02160 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PADK2_04575 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PADK2_10175 putative ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PADK2_07550 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PADK2_06165 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PADK2_25170 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PADK2_27720 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PADK2_25275 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PADK2_22850 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PADK2_26210 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PADK2_27735 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PADK2_13075 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PADK2_00715 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PADK2_25105 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PADK2_01685 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PADK2_10940 carbon storage regulator K03563 csrA; carbon storage regulator
D PADK2_21175 carbon storage regulator K03563 csrA; carbon storage regulator
D PADK2_16820 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A
D PADK2_23255 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D PADK2_07800 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PADK2_04520 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pdk03011]
D PADK2_08525 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PADK2_06060 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PADK2_03385 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PADK2_03475 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PADK2_03440 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PADK2_26165 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PADK2_03335 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PADK2_03425 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PADK2_23090 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PADK2_03350 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PADK2_03470 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PADK2_03330 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PADK2_03465 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PADK2_03420 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PADK2_25175 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PADK2_05610 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PADK2_03400 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PADK2_26160 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PADK2_03375 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PADK2_24245 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PADK2_02920 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PADK2_03305 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PADK2_03370 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PADK2_03355 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PADK2_03360 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PADK2_03415 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PADK2_03430 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PADK2_26150 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PADK2_03310 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PADK2_03300 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PADK2_03315 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PADK2_23095 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PADK2_03405 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PADK2_03450 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PADK2_03390 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PADK2_03485 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PADK2_03435 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PADK2_05625 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PADK2_10800 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PADK2_24270 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PADK2_03380 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PADK2_03365 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PADK2_03410 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PADK2_24265 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PADK2_28315 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PADK2_03395 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PADK2_03445 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PADK2_06335 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PADK2_26740 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PADK2_09505 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PADK2_28310 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PADK2_29590 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PADK2_10795 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PADK2_03460 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PADK2_06340 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PADK2_24810 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PADK2_r29729 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29731 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29727 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29725 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29735 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29737 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29739 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29733 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29743 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29747 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29741 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pdk03009]
D PADK2_21840 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PADK2_25375 putative serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PADK2_26245 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PADK2_21835 era; GTPase Era K03595 era; GTPase
D PADK2_24260 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D PADK2_25085 suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PADK2_29420 putative C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D PADK2_25195 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PADK2_04065 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PADK2_03295 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PADK2_22045 putative pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PADK2_02985 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PADK2_00085 16S rRNA methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PADK2_24580 ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PADK2_01860 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PADK2_02110 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PADK2_29560 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PADK2_23030 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PADK2_23040 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PADK2_05940 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PADK2_19840 rRNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PADK2_26170 putative rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PADK2_25230 cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PADK2_05120 23S rRNA mA1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D PADK2_24525 hypothetical protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D PADK2_04305 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PADK2_01775 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PADK2_18675 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PADK2_26590 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PADK2_17900 putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D PADK2_05295 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PADK2_16460 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PADK2_21040 rumA; 23S rRNA m(5)U1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PADK2_08095 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PADK2_15435 putative pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PADK2_08440 putative pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PADK2_09480 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PADK2_24145 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PADK2_04485 putative pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PADK2_20130 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PADK2_24850 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PADK2_15995 ribosomal protein alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PADK2_27505 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D PADK2_08085 putative ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D PADK2_05615 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PADK2_21125 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PADK2_16005 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D PADK2_25735 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PADK2_17315 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D PADK2_11510 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PADK2_09475 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PADK2_23315 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PADK2_02035 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PADK2_02285 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D PADK2_10175 putative ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PADK2_26250 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PADK2_05330 GTP-binding protein Der K03977 engA; GTPase
D PADK2_26205 GTP-binding protein HflX K03665 hflX; GTPase
D PADK2_00110 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PADK2_28425 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PADK2_25185 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PADK2_25200 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D PADK2_04300 hypothetical protein K09710 ybeB; ribosome-associated protein
D PADK2_04410 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor
D PADK2_25235 putative RNA-binding protein K07574 yhbY; RNA-binding protein
D PADK2_23295 hypothetical protein K09889 yjgA; ribosome-associated protein
D PADK2_09095 ribosome modulation factor K03812 rmf; ribosome modulation factor
D PADK2_23245 putative ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D PADK2_24820 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D PADK2_09500 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pdk03016]
D PADK2_02945 cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PADK2_24345 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D PADK2_08660 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PADK2_20910 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PADK2_24230 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PADK2_04385 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PADK2_06850 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PADK2_16710 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PADK2_26750 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PADK2_05840 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PADK2_20875 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PADK2_21185 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PADK2_10785 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PADK2_11600 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PADK2_16705 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PADK2_05150 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PADK2_05315 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PADK2_10805 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PADK2_10810 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PADK2_03265 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PADK2_23125 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PADK2_26890 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PADK2_03205 putative HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PADK2_07810 putative HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PADK2_19110 putative HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PADK2_01920 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PADK2_07330 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PADK2_08765 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PADK2_25180 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PADK2_06210 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PADK2_05255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_15335 putative pyridoxal-phosphate dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_00110 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PADK2_26215 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PADK2_29575 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PADK2_29565 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PADK2_17500 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PADK2_27385 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PADK2_29585 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PADK2_06725 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D PADK2_28405 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PADK2_19170 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PADK2_10070 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PADK2_00290 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D PADK2_24405 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D PADK2_00045 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PADK2_00040 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PADK2_25090 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PADK2_06440 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PADK2_16450 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PADK2_05500 putative Cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PADK2_10440 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PADK2_25745 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PADK2_08685 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PADK2_04420 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PADK2_15475 putative methylase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PADK2_21815 hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PADK2_21820 tRNA mo(5)U34 methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D PADK2_25425 putative methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D PADK2_25070 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PADK2_05620 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PADK2_05240 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D PADK2_27130 putative rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PADK2_08095 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PADK2_15435 putative pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PADK2_11530 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PADK2_19680 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PADK2_17895 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PADK2_20710 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PADK2_11625 putative DsrH family protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PADK2_11630 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PADK2_11635 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PADK2_11620 hypothetical protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PADK2_05265 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D PADK2_21905 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D PADK2_16730 hypothetical protein K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D PADK2_06980 mnmC; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D PADK2_05205 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PADK2_20810 hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PADK2_11320 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PADK2_20815 putative radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PADK2_10385 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PADK2_26240 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PADK2_17495 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PADK2_05210 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PADK2_27085 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PADK2_06150 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PADK2_05915 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PADK2_02925 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PADK2_26230 putative ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PADK2_19825 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PADK2_26175 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PADK2_25170 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pdk03012]
D PADK2_25685 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D PADK2_25190 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PADK2_10790 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PADK2_27785 ATP-binding component of ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PADK2_06065 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PADK2_03285 elongation factor Tu K02358 tuf; elongation factor Tu
D PADK2_03345 elongation factor Tu K02358 tuf; elongation factor Tu
D PADK2_03340 elongation factor G K02355 fusA; elongation factor G
D PADK2_15290 elongation factor G K02355 fusA; elongation factor G
D PADK2_25510 selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D PADK2_24780 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PADK2_06075 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D PADK2_24775 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PADK2_24815 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PADK2_11565 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PADK2_10120 elongation factor P K02356 efp; elongation factor P
D PADK2_05835 putative peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PADK2_04810 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PADK2_29095 prfH; peptide chain release factor-like protein K02839 prfH; peptide chain release factor
D PADK2_04370 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D PADK2_21360 hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pdk03110]
D PADK2_11560 ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PADK2_24135 clpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PADK2_02305 putative ClpA/B protease ATP binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PADK2_16655 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PADK2_26765 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PADK2_17730 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PADK2_20340 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D PADK2_25275 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PADK2_05275 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D PADK2_25855 putative heat-shock protein K04046 yegD; hypothetical chaperone protein
D PADK2_22850 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PADK2_25270 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PADK2_03015 hypothetical protein K05801 djlA; DnaJ like chaperone protein
D PADK2_05270 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D PADK2_27485 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D PADK2_25280 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PADK2_08700 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D PADK2_27495 putative heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PADK2_22855 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D PADK2_21860 serine protease MucD precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D PADK2_25225 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PADK2_29540 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PADK2_15030 chaperone CupA2 K07346 fimC; fimbrial chaperone protein
D PADK2_24710 pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D PADK2_27135 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PADK2_08300 putative periplasmic inhibitor/zinc-resistance associated protein K06006 cpxP; periplasmic protein CpxP/Spy
D PADK2_05400 putative membrane or periplasmic protein K09796 pccA; periplasmic copper chaperone A
D PADK2_08190 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PADK2_16715 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PADK2_16640 periplasmic folding chaperone K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PADK2_07990 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PADK2_24290 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PADK2_27800 putative peptidyl-prolyl cis-trans isomerase, FkbP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PADK2_24220 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D PADK2_21520 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PADK2_04980 putative peptidyl-prolyl cis-trans isomerase, PpiC-type K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PADK2_15670 peptidyl-prolyl cis-trans isomerase C1 K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PADK2_02995 peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PADK2_11180 putative thioredoxin K03671 TXN; thioredoxin
D PADK2_27725 thioredoxin K03671 TXN; thioredoxin
D PADK2_04025 thioredoxin K05838 ybbN; putative thioredoxin
D PADK2_27140 glutaredoxin K03676 grxC; glutaredoxin 3
D PADK2_06700 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D PADK2_29185 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PADK2_02715 disulfide bond formation protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PADK2_27810 disulfide bond formation protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PADK2_05650 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PADK2_12855 thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D PADK2_25710 dipZ; thiol:disulfide interchange protein precursor K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D PADK2_18320 cytochrome C biogenesis protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D PADK2_12865 dsbG; disulfide isomerase/thiol-disulfide oxidase K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:pdk04131]
D PADK2_05290 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PADK2_24590 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PADK2_28100 arsenite-activated ATPase (arsA) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PADK2_08355 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PADK2_09340 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PADK2_22560 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PADK2_18230 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PADK2_17730 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PADK2_20340 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:pdk04121]
C 03051 Proteasome [BR:pdk03051]
D PADK2_17730 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PADK2_20340 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pdk03032]
D PADK2_16590 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PADK2_28475 putative DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D PADK2_04625 putative DNA binding protein K03530 hupB; DNA-binding protein HU-beta
D PADK2_16645 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PADK2_10815 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PADK2_08530 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PADK2_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PADK2_23685 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PADK2_26145 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PADK2_02910 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PADK2_03510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_23765 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_06140 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PADK2_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PADK2_05160 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PADK2_04375 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PADK2_09550 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PADK2_08165 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_16585 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_06130 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PADK2_29205 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PADK2_18080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PADK2_23725 DNA adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PADK2_20960 DNA replication initiation factor K10763 hda; DnaA-homolog protein
D PADK2_08495 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PADK2_00020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PADK2_26310 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PADK2_26325 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PADK2_09290 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PADK2_14055 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PADK2_23775 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PADK2_12250 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pdk03036]
D PADK2_12025 AAA ATPase, central domain protein K22399 TRIP13; pachytene checkpoint protein 2
D PADK2_21840 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PADK2_28475 putative DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D PADK2_04625 putative DNA binding protein K03530 hupB; DNA-binding protein HU-beta
D PADK2_16645 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PADK2_10815 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PADK2_08530 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PADK2_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PADK2_20880 putative dna-binding stress protein K04047 dps; starvation-inducible DNA-binding protein
D PADK2_25750 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PADK2_26210 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PADK2_22735 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D PADK2_04500 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_28275 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_12345 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_25395 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_23470 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_14045 transcriptional regulator BkdR K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PADK2_05070 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D PADK2_23720 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D PADK2_18090 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D PADK2_08335 hypothetical protein K05896 scpA; segregation and condensation protein A
D PADK2_08340 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D PADK2_22970 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PADK2_06170 putative septum formation initiator K05589 ftsB; cell division protein FtsB
D PADK2_01880 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PADK2_13915 penicillin-binding protein 3A K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PADK2_23020 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PADK2_11585 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PADK2_23025 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PADK2_22975 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PADK2_22995 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PADK2_01885 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PADK2_22965 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PADK2_18085 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D PADK2_27655 hypothetical protein K09888 zapA; cell division protein ZapA
D PADK2_28770 hypothetical protein K09888 zapA; cell division protein ZapA
D PADK2_27650 hypothetical protein K09892 zapB; cell division protein ZapB
D PADK2_13505 hypothetical protein K06916 zapE; cell division protein ZapE
D PADK2_23645 putative ATPase K06916 zapE; cell division protein ZapE
D PADK2_23120 putative ATPase K06916 zapE; cell division protein ZapE
D PADK2_26225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PADK2_29430 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PADK2_22790 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PADK2_08110 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D PADK2_08105 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D PADK2_08100 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D PADK2_09305 cell division inhibitor, putative K13053 sulA; cell division inhibitor SulA
D PADK2_23335 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PADK2_23330 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PADK2_23325 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PADK2_04315 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PADK2_26635 putative ATPase nvolved in chromosome partitioning K03496 parA; chromosome partitioning protein
D PADK2_29555 chromosome partitioning protein Soj K03496 parA; chromosome partitioning protein
D PADK2_18415 putative plasmid partitioning protein K03496 parA; chromosome partitioning protein
D PADK2_11895 ParB domain-containing protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PADK2_29550 chromosome partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PADK2_26310 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PADK2_26325 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PADK2_29565 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PADK2_29560 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PADK2_27935 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PADK2_05645 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PADK2_06855 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PADK2_29200 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pdk03400]
D PADK2_20770 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PADK2_24755 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PADK2_21950 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PADK2_04275 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PADK2_27240 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PADK2_06800 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PADK2_16325 putative DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PADK2_08435 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PADK2_22930 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PADK2_10600 putative pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PADK2_06910 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PADK2_26070 putative ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PADK2_28340 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PADK2_06360 methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PADK2_15095 O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PADK2_17270 DNA-3-methyladenine glycosidase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PADK2_00050 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PADK2_01790 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PADK2_12510 exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PADK2_28395 catabolite repression control protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PADK2_05715 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PADK2_18080 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PADK2_29205 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PADK2_03500 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PADK2_08640 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PADK2_11735 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PADK2_28170 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_28960 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_14140 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PADK2_03320 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PADK2_03325 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PADK2_03480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PADK2_28420 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PADK2_09335 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PADK2_06240 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PADK2_26220 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D PADK2_22495 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PADK2_05445 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PADK2_04115 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PADK2_06140 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PADK2_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PADK2_05160 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PADK2_04375 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PADK2_09550 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PADK2_08165 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_16585 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PADK2_03510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_23765 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_23725 DNA adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PADK2_22325 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PADK2_22330 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PADK2_22320 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PADK2_06255 recA; recombinase A K03553 recA; recombination protein RecA
D PADK2_20860 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PADK2_20855 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PADK2_20865 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PADK2_26745 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PADK2_11015 hypothetical protein K04067 priC; primosomal replication protein N''
D PADK2_22315 putative exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D PADK2_22310 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D PADK2_24480 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PADK2_00015 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D PADK2_28460 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PADK2_21830 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PADK2_18050 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PADK2_25285 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PADK2_07985 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D PADK2_13140 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D PADK2_22450 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PADK2_14915 putative KU domain protein K10979 ku; DNA end-binding protein Ku
D PADK2_14980 ligD; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D PADK2_08495 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PADK2_00020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PADK2_09290 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PADK2_14055 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PADK2_23775 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PADK2_28475 putative DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D PADK2_04625 putative DNA binding protein K03530 hupB; DNA-binding protein HU-beta
D PADK2_16645 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PADK2_25750 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PADK2_10815 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PADK2_08530 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PADK2_07550 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PADK2_21090 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PADK2_09310 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PADK2_16220 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D PADK2_22295 hypothetical protein K14160 imuA; protein ImuA
D PADK2_22300 hypothetical protein K14161 imuB; protein ImuB
D PADK2_22305 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D PADK2_06260 recX; recombination regulator RecX K03565 recX; regulatory protein
D PADK2_28215 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D PADK2_20460 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PADK2_07940 putative ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PADK2_19865 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PADK2_29225 NrdJa K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PADK2_19870 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pdk03029]
D PADK2_23080 putative cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PADK2_25190 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PADK2_10790 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PADK2_06065 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PADK2_03285 elongation factor Tu K02358 tuf; elongation factor Tu
D PADK2_03345 elongation factor Tu K02358 tuf; elongation factor Tu
D PADK2_03340 elongation factor G K02355 fusA; elongation factor G
D PADK2_15290 elongation factor G K02355 fusA; elongation factor G
D PADK2_21835 era; GTPase Era K03595 era; GTPase
D PADK2_03265 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PADK2_04385 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PADK2_20875 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PADK2_26750 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PADK2_23345 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PADK2_23350 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PADK2_23340 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PADK2_19005 putative protease K01173 ENDOG; endonuclease G, mitochondrial
D PADK2_03510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_23765 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PADK2_06100 putative outer membrane protein precursor K07277 SAM50; outer membrane protein insertion porin family
D PADK2_25275 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PADK2_25280 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PADK2_22850 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PADK2_22855 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D PADK2_25270 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PADK2_05255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_15335 putative pyridoxal-phosphate dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_05270 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D PADK2_06700 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D PADK2_06855 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PADK2_00580 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PADK2_19035 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PADK2_00550 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PADK2_00575 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PADK2_29580 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PADK2_00565 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D PADK2_00585 hypothetical protein K07152 SCO1; protein SCO1
D PADK2_17730 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PADK2_20340 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pdk02000]
D PADK2_26480 transport protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PADK2_08185 ATP-binding/permease fusion ABC transporter K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PADK2_03560 putative ATP-binding component of ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PADK2_20105 putative ATP-binding/permease fusion ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PADK2_16270 ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PADK2_07235 transport protein HasD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PADK2_19420 alkaline protease secretion protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PADK2_21405 ATP-binding/permease fusion ABC transporter K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D PADK2_13315 putative ATP-binding/permease fusion ABC transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PADK2_13280 pyoverdine biosynthesis protein PvdE K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D PADK2_09250 putative ATP-binding component of ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein
D PADK2_18255 sulfate-binding protein of ABC transporter K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PADK2_01405 sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PADK2_01400 sulfate transport protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PADK2_01395 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PADK2_01390 sulfate transport protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PADK2_16340 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PADK2_16345 molybdenum transport protein ModB K02018 modB; molybdate transport system permease protein
D PADK2_16350 molybdenum transport protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PADK2_04635 putative periplasmic taurine-binding protein precursor K15551 tauA; taurine transport system substrate-binding protein
D PADK2_04645 putative permease of ABC taurine transporter K15552 tauC; taurine transport system permease protein
D PADK2_04640 putative ATP-binding component of ABC taurine transporter K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PADK2_07015 putative sulfonate binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_07035 putative ABC-type transporter periplasmic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11680 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11685 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11690 putative periplasmic aliphatic sulfonate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_00935 sulfate ester transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_11665 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_13725 putative ABC transporter, periplasmic binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_13790 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PADK2_07020 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_07045 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D PADK2_00930 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_13735 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_13795 putative permease of ABC transporter K15554 ssuC; sulfonate transport system permease protein
D PADK2_00925 ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_07025 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_07050 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_13730 putative ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_13800 ATP-binding component of ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PADK2_27605 putative binding protein component of ABC iron transporter K02012 afuA; iron(III) transport system substrate-binding protein
D PADK2_24895 ferric iron-binding periplasmic protein HitA K02012 afuA; iron(III) transport system substrate-binding protein
D PADK2_27600 putative permease of ABC iron transporter K02011 afuB; iron(III) transport system permease protein
D PADK2_24900 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D PADK2_06675 putative ATP-binding component of ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PADK2_06290 polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PADK2_01610 putative binding protein component of ABC transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PADK2_06295 polyamine transport protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D PADK2_01615 putative permease of ABC transporter K11070 potC; spermidine/putrescine transport system permease protein
D PADK2_06300 polyamine transport protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D PADK2_01620 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D PADK2_06305 polyamine transport protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PADK2_01625 putative ATP-binding component of ABC transporter K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PADK2_01465 putative periplasmic polyamine binding protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_01490 polyamine transport protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_01495 polyamine transport protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_11095 putative periplasmic spermidine/putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_11700 putative periplasmic spermidine/putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_18660 putative periplasmic spermidine/putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PADK2_01510 polyamine transport protein PotI K11074 potI; putrescine transport system permease protein
D PADK2_01505 polyamine transport protein PotH K11075 potH; putrescine transport system permease protein
D PADK2_01500 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PADK2_08075 putative ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_03035 putative binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_03045 putative binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_01095 putative binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_26420 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PADK2_03055 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PADK2_08060 putative permease of ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PADK2_08065 putative permease of ABC transporter K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PADK2_03050 putative permease of ABC transporter K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PADK2_08055 putative ATP-binding component of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PADK2_03040 putative ATP-binding component of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PADK2_00150 putative glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_08145 putative glycine betaine-binding protein precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_26975 putative binding protein component of ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_27010 putative ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_28625 putative glycine betaine/L-proline ABC transporter, periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_28675 putative glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PADK2_26970 putative permease of ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D PADK2_28620 glycine/betaine/L-proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PADK2_26965 putative ATP-binding component of ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PADK2_28615 putative ATP-binding component of ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PADK2_04885 putative binding protein component of ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D PADK2_04880 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PADK2_04890 putative permease of ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D PADK2_04875 putative ATP-binding component of ABC transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PADK2_13630 putative sulfonate ABC transporter, periplasmic sulfonate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PADK2_13635 putative permease of ABC transporter K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PADK2_13625 putative ATP-binding component of ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PADK2_13565 putative ATP-binding component of ABC maltose/mannitol transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PADK2_08400 putative ATP-binding component of ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PADK2_08385 putative binding protein component of ABC sugar transporter K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PADK2_08390 putative permease of ABC sugar transporter K17316 gtsB; glucose/mannose transport system permease protein
D PADK2_08395 putative permease of ABC sugar transporter K17317 gtsC; glucose/mannose transport system permease protein
D PADK2_15925 binding protein component precursor of ABC ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D PADK2_15915 membrane protein component of ABC ribose transporter K10440 rbsC; ribose transport system permease protein
D PADK2_15920 ribose transporter RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PADK2_13580 binding protein component of ABC maltose/mannitol transporter K10227 smoE; polyol transport system substrate-binding protein
D PADK2_13575 putative binding-protein-dependent maltose/mannitol transport protein K10228 smoF; polyol transport system permease protein
D PADK2_13570 putative binding-protein-dependent maltose/mannitol transport protein K10229 smoG; polyol transport system permease protein
D PADK2_00740 putative basic membrane protein (bmp) K07335 bmpA; basic membrane protein A and related proteins
D PADK2_00695 putative permease of ABC transporter K23535 nupB; general nucleoside transport system permease protein
D PADK2_00700 putative permease of ABC transporter K23536 nupC; general nucleoside transport system permease protein
D PADK2_00690 putative ATP-binding component of ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D PADK2_08260 ABC-type transporter, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PADK2_23200 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PADK2_08270 putative permease of ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PADK2_23205 putative permease of ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PADK2_08265 putative ATP-binding component of ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PADK2_23210 putative ATP-binding component of ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PADK2_08255 putative ABC-type uncharacterized transport system K18480 linN; cholesterol transport system auxiliary component
D PADK2_23195 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PADK2_23190 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D PADK2_12495 putative ABC-type periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PADK2_28580 phosphate ABC transporter, periplasmic phosphate-binding protein, PstS K02040 pstS; phosphate transport system substrate-binding protein
D PADK2_28575 membrane protein component of ABC phosphate transporter K02037 pstC; phosphate transport system permease protein
D PADK2_28570 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D PADK2_28565 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PADK2_07355 binding protein component of ABC phosphonate transporter K02044 phnD; phosphonate transport system substrate-binding protein
D PADK2_07705 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D PADK2_07360 phosphonate transport protein PhnE K02042 phnE; phosphonate transport system permease protein
D PADK2_07690 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D PADK2_07695 putative permease of ABC transporter K02042 phnE; phosphonate transport system permease protein
D PADK2_07350 ATP-binding component of ABC phosphonate transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PADK2_07700 putative ATP-binding component of ABC transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PADK2_09745 histidine/lysine/arginine/ornithine ABC transporter permease HisM K10015 hisM; histidine transport system permease protein
D PADK2_09750 histidine transport system permease HisQ K10016 hisQ; histidine transport system permease protein
D PADK2_09740 histidine transport protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_09755 periplasmic histidine-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein
D PADK2_18930 putative binding protein component of ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PADK2_18940 putative permease of ABC transporter K10002 gltK; glutamate/aspartate transport system permease protein
D PADK2_18935 putative permease of ABC transporter K10003 gltJ; glutamate/aspartate transport system permease protein
D PADK2_18945 putative ATP-binding component of ABC transporter K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_05025 putative amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PADK2_01565 L-cysteine transporter of ABC system FliY K02424 tcyA; L-cystine transport system substrate-binding protein
D PADK2_01560 ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D PADK2_04990 putative amino acid binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PADK2_21260 arginine/ornithine binding protein AotJ K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D PADK2_21250 arginine/ornithine transport protein AotM K10023 aotM; arginine/ornithine transport system permease protein
D PADK2_21255 arginine/ornithine transport protein AotQ K10024 aotQ; arginine/ornithine transport system permease protein
D PADK2_21240 arginine/ornithine transport protein AotP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_19350 putative binding protein component of ABC transporter K23061 lhpP; hydroxyproline transporter system substrate-binding protein
D PADK2_19360 putative permease of ABC transporter K23062 lhpM; hydroxyproline transport system permease protein
D PADK2_19365 ABC transporter permease K23063 lhpN; hydroxyproline transport system permease protein
D PADK2_19370 putative ATP-binding component of ABC transporter K23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_07450 aliphatic amidase expression-regulating protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_26055 putative binding protein component of ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_20310 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PADK2_26050 putative permease of ABC branched chain amino acid transporter K01997 livH; branched-chain amino acid transport system permease protein
D PADK2_20315 branched-chain amino acid transport protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D PADK2_26045 putative permease of ABC branched-chain amino acid transporter K01998 livM; branched-chain amino acid transport system permease protein
D PADK2_20320 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PADK2_26040 putative ATP-binding component of ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PADK2_20325 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PADK2_20330 branched-chain amino acid transport protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PADK2_26035 putative ATP-binding component of ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PADK2_04670 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D PADK2_13525 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D PADK2_29265 putative TonB-dependent receptor K02073 metQ; D-methionine transport system substrate-binding protein
D PADK2_13515 putative permease of ABC transporter K02072 metI; D-methionine transport system permease protein
D PADK2_29260 putative permease of ABC transporter K02072 metI; D-methionine transport system permease protein
D PADK2_13520 phosphate ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PADK2_29255 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D PADK2_25780 hypothetical protein K11959 urtA; urea transport system substrate-binding protein
D PADK2_25785 putative branched-chain amino acid ABC transporter, permease protein K11960 urtB; urea transport system permease protein
D PADK2_25790 putative permease of ABC transporter K11961 urtC; urea transport system permease protein
D PADK2_25795 putative ATP-binding component of ABC transporter K11962 urtD; urea transport system ATP-binding protein
D PADK2_25800 ATP-binding component of ABC transporter K11963 urtE; urea transport system ATP-binding protein
D PADK2_05140 putative ABC transporter, periplasmic substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PADK2_05135 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D PADK2_05130 putative ABC-transporter ATP-binding component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D PADK2_27270 putative periplasmic binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein
D PADK2_27275 putative permease of ABC transporter K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D PADK2_27280 putative permease of ABC transporter K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D PADK2_27265 putative ATP-binding component of ABC transporter K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_09860 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_27185 putative ABC-type amino acid transport protein, periplasmic component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_02275 putative periplasmic transport system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_14635 putative binding protein component of ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_04190 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_03695 putative binding protein component of ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_26405 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_21805 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_27190 putative ABC-type amino acid transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_27880 putative ABC-type amino acid transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_26875 putative binding protein component of ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_27180 putative ABC-type amino acid transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_04530 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_08000 putative periplasmic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_04080 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_18070 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PADK2_03700 putative permease of ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein
D PADK2_03705 putative permease of ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein
D PADK2_14640 putative amino acid permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PADK2_14645 putative amino acid permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PADK2_26870 putative permease of ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein
D PADK2_26865 putative ATP-binding component of ABC transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_03710 putative ATP-binding component of ABC transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PADK2_28320 putative binding protein component of ABC dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23440 putative binding protein component of ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23410 putative binding protein component of ABC transpor K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23415 ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23430 putative binding protein component of ABC transporter K12368 dppA; dipeptide transport system substrate-binding protein
D PADK2_23445 putative permease of ABC transporter K12369 dppB; dipeptide transport system permease protein
D PADK2_23450 putative permease of ABC transporter K12370 dppC; dipeptide transport system permease protein
D PADK2_23455 putative ATP-binding component of ABC transporter K12371 dppD; dipeptide transport system ATP-binding protein
D PADK2_23460 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein
D PADK2_15355 putative binding protein component of ABC transporter K13893 yejA; microcin C transport system substrate-binding protein
D PADK2_16610 putative solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PADK2_16615 putative binding protein component of ABC transporter K13893 yejA; microcin C transport system substrate-binding protein
D PADK2_15350 putative permease of ABC transporter K13894 yejB; microcin C transport system permease protein
D PADK2_16620 putative permease of ABC transporter K13894 yejB; microcin C transport system permease protein
D PADK2_15345 putative permease of ABC transporter K13895 yejE; microcin C transport system permease protein
D PADK2_16625 putative permease of ABC transporter K13895 yejE; microcin C transport system permease protein
D PADK2_15340 ATP-binding component of ABC transporter K13896 yejF; microcin C transport system ATP-binding protein
D PADK2_16630 microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein
D PADK2_25005 Heme-transporter, PhuT K25132 hmuT; heme transport system substrate-binding protein
D PADK2_25000 ABC transporter permease K25133 hmuU; heme transport system permease protein
D PADK2_24995 hmuV; hemin importer ATP-binding subunit K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PADK2_09805 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PADK2_09800 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PADK2_09810 putative ATP-binding component of ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PADK2_04100 putative ABC transporter K06858 btuF; vitamin B12 transport system substrate-binding protein
D PADK2_13235 putative adhesion protein K09815 znuA; zinc transport system substrate-binding protein
D PADK2_29230 putative adhesin K09815 znuA; zinc transport system substrate-binding protein
D PADK2_13225 putative permease of ABC transporter K09816 znuB; zinc transport system permease protein
D PADK2_29245 permease of ABC zinc transporter ZnuB K09816 znuB; zinc transport system permease protein
D PADK2_13230 putative ATP-binding component of ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PADK2_29240 zinc transport protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PADK2_11260 putative permease of ABC-2 transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D PADK2_29000 membrane subunit of A-band LPS efflux transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D PADK2_28995 ABC subunit of A-band LPS efflux transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PADK2_05180 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D PADK2_05185 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D PADK2_23235 putative ATP-binding component of ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PADK2_07295 NosY protein K19341 nosY; Cu-processing system permease protein
D PADK2_07300 NosF protein K19340 nosF; Cu-processing system ATP-binding protein
D PADK2_05985 putative permease of ABC transporter K25151 gldF; gliding motility-associated transport system permease protein
D PADK2_04135 putative ABC transporter permease component K25151 gldF; gliding motility-associated transport system permease protein
D PADK2_04140 putative ATP-binding component of ABC transporter K25152 gldA; gliding motility-associated transport system ATP-binding protein
D PADK2_05980 putative ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D PADK2_05990 putative auxiliary component of ABC transporter K25153 gldG; gliding motility-associatede transport system auxiliary component
D PADK2_04130 putative ABC transporter component K25153 gldG; gliding motility-associatede transport system auxiliary component
D PADK2_09415 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PADK2_09425 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PADK2_09420 putative ATP-binding component of ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PADK2_18335 heme exporter protein D K02196 ccmD; heme exporter protein D
D PADK2_18340 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D PADK2_18345 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PADK2_18350 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PADK2_01885 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PADK2_01880 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PADK2_07270 putative ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PADK2_27675 putative permease of ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PADK2_07265 antibiotic transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PADK2_10360 inner membrane transport permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PADK2_10355 putative ATP-binding component of ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PADK2_00380 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PADK2_04005 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PADK2_10085 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PADK2_24395 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PADK2_00385 putative ATP-binding component of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PADK2_04010 putative ATP-binding component of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PADK2_10090 putative ATP-binding component of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PADK2_24400 putative ATP-binding component of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PADK2_15515 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PADK2_28205 multidrug efflux protein NorA K26939 norM; MATE family, multidrug efflux pump
D PADK2_18825 putative transporter K26939 norM; MATE family, multidrug efflux pump
D PADK2_25585 putative transporter K26937 dinF; MATE family, multidrug efflux pump
D PADK2_29390 putative MFS dicarboxylate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D PADK2_01130 dicarboxylic acid transporter PcaT K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D PADK2_28585 putative major facilitator superfamily (MFS) transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PADK2_01190 putative major facilitator superfamily (MFS) transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D PADK2_14605 putative MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D PADK2_14585 putative major facilitator superfamily (MFS) transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D PADK2_01160 4-hydroxybenzoate transporter PcaK K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D PADK2_12885 major facilitator superfamily (MFS) transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D PADK2_15620 putative major facilitator superfamily (MFS) transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D PADK2_20600 cis,cis-muconate transporter MucK K08196 mucK; MFS transporter, AAHS family, cis,cis-muconate transporter
D PADK2_25990 putative major facilitator superfamily (MFS) transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D PADK2_26005 putative major facilitator superfamily (MFS) transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D PADK2_01355 major facilitator superfamily (MFS) transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PADK2_12745 major facilitator superfamily (MFS) transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PADK2_17580 major facilitator superfamily (MFS) transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PADK2_15305 putative major facilitator superfamily (MFS) transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D PADK2_17295 putative MFS metabolite transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D PADK2_27700 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D PADK2_28145 major facilitator transporter K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D PADK2_04950 nitrite extrusion protein 1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PADK2_04955 nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PADK2_16765 nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PADK2_22895 putative permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PADK2_03580 putative transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PADK2_20015 major facilitator superfamily (MFS) transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PADK2_06485 putative major facilitator superfamily (MFS) transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PADK2_03750 putative arabinose transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D PADK2_10450 hypothetical protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PADK2_07770 putative major facilitator superfamily (MFS) transporter K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D PADK2_15190 putative major facilitator superfamily (MFS) transporter K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D PADK2_07590 major facilitator superfamily (MFS) transporter K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D PADK2_22690 putative major facilitator superfamily (MFS) transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PADK2_10200 major facilitator superfamily (MFS) transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PADK2_08645 MFS family transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PADK2_27305 drug efflux transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PADK2_19460 putative major facilitator superfamily (MFS) transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PADK2_19235 major facilitator superfamily (MFS) transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D PADK2_19060 putative major facilitator superfamily (MFS) transporter K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D PADK2_27615 hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PADK2_26645 putative major facilitator superfamily (MFS) transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PADK2_06925 major facilitator superfamily (MFS) transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D PADK2_01690 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PADK2_23260 phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr
D PADK2_06555 putative phosphotransferase system enzyme I K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PADK2_05535 putative phosphotransferase protein K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PADK2_05530 putative phosphotransferase system protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PADK2_06565 phosphotransferase system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PADK2_23250 nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PADK2_04155 aquaporin Z K06188 aqpZ; aquaporin Z
D PADK2_06435 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D PADK2_18240 putative potassium channel K10716 kch; voltage-gated potassium channel
D PADK2_09150 putative transporter K03320 amt; ammonium transporter, Amt family
D PADK2_27970 ammonium transporter AmtB K03320 amt; ammonium transporter, Amt family
D PADK2_09170 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_16200 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_17430 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_18395 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_22935 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_10350 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_10270 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_02380 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PADK2_23070 stringent starvation protein A K03599 sspA; stringent starvation protein A
D PADK2_08965 TPR domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PADK2_08970 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D PADK2_11640 putative 24K membrane protein K19416 yccA; modulator of FtsH protease
D PADK2_24510 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PADK2_26605 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel
D PADK2_18670 putative mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D PADK2_26115 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D PADK2_22900 putative mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D PADK2_27100 putative small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D PADK2_06920 hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel
D PADK2_21140 magnesium transporter K06213 mgtE; magnesium transporter
D PADK2_18235 putative transporter K08717 utp; urea transporter
D PADK2_07460 hypothetical protein K22112 amiS; putative amide transporter protein
D PADK2_26260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PADK2_18425 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PADK2_26255 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PADK2_18420 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D PADK2_06735 putative outer membrane protein precursor K21218 motY; sodium-type flagellar protein MotY
D PADK2_01000 transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D PADK2_09440 putative tolQ-type transport protein K03561 exbB; biopolymer transport protein ExbB
D PADK2_22185 transporter ExbB2 K03561 exbB; biopolymer transport protein ExbB
D PADK2_09445 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D PADK2_22180 transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D PADK2_01005 transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D PADK2_20845 TolQ protein K03562 tolQ; biopolymer transport protein TolQ
D PADK2_20840 TolR protein K03560 tolR; biopolymer transport protein TolR
D PADK2_27870 magnesium/cobalt transporter K03284 corA; magnesium transporter
D PADK2_16815 CmaX protein K16074 zntB; zinc transporter
D PADK2_16285 putative cation transporter K16074 zntB; zinc transporter
D PADK2_22840 chromosome condensation membrane protein K06199 crcB; fluoride exporter
D PADK2_12180 putative mercuric transport protein K08363 merT; mercuric ion transport protein
D PADK2_12175 mercuric transporter periplasmic component K08364 merP; periplasmic mercuric ion binding protein
D PADK2_28545 putative metal ion transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PADK2_05595 putative hemolysin containing a CBS domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PADK2_07900 Pyrophosphate-specific outer membrane porin OprO precursor K07221 oprO_P; phosphate-selective porin OprO and OprP
D PADK2_07905 phosphate-specific outer membrane porin OprP precursor K07221 oprO_P; phosphate-selective porin OprO and OprP
D PADK2_16795 Major porin and structural outer membrane porin OprF precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PADK2_19200 putative outer membrane protein precursor K06076 fadL; long-chain fatty acid transport protein
D PADK2_24375 outer membrane protein precursor K06076 fadL; long-chain fatty acid transport protein
D PADK2_03905 usher CupB3 K07347 fimD; outer membrane usher protein
D PADK2_20775 usher CupC3 K07347 fimD; outer membrane usher protein
D PADK2_24715 hypothetical protein K07347 fimD; outer membrane usher protein
D PADK2_15025 usher CupA3 K07347 fimD; outer membrane usher protein
D PADK2_06690 serine protease K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D PADK2_27055 esterase EstA K12686 apeE; outer membrane lipase/esterase
D PADK2_06645 Alginate production outer membrane protein AlgE precursor K16081 algE; alginate production protein
D PADK2_21050 outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor
D PADK2_11205 outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor
D PADK2_23500 putative outer membrane ferric siderophore receptor K16090 fiu; catecholate siderophore receptor
D PADK2_19030 putative TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D PADK2_04820 Fe(III) dicitrate transporter FecA K16091 fecA; Fe(3+) dicitrate transport protein
D PADK2_07960 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D PADK2_19290 putative tonB-dependent receptor K16092 btuB; vitamin B12 transporter
D PADK2_07230 heme acquisition protein HasAp K12545 hasA; heme acquisition protein HasA
D PADK2_07225 heme uptake outer membrane receptor HasR precursor K16152 hasR; heme acquisition protein HasR
D PADK2_03565 Fe(III)-pyochelin outer membrane receptor precursor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D PADK2_16025 putative TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PADK2_25975 hypothetical protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PADK2_25015 Heme/Hemoglobin uptake outer membrane receptor PhuR precursor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PADK2_19130 putative heme utilization protein precursor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PADK2_00765 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_00965 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_13595 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_13830 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_05375 Putative copper transport outer membrane porin OprC precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_12915 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_13275 ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_02190 putative outer membrane ferric siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_09815 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_11710 putative outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_02365 Ferrichrome receptor FiuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_15295 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_16090 putative tonB-dependent receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_17645 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_18805 siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_24835 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_25670 putative outer membrane protein precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_15205 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_21785 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_15360 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PADK2_07245 outer membrane protein HasF K12538 hasF; outer membrane protein, type I secretion system
D PADK2_19410 alkaline protease secretion outer membrane protein AprF precursor K12538 hasF; outer membrane protein, type I secretion system
D PADK2_12635 outer membrane protein precursor CzcC K15725 czcC; outer membrane protein, heavy metal efflux system
D PADK2_11760 heavy metal RND efflux outer membrane protein, CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D PADK2_14420 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D PADK2_26360 putative outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_24390 outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_16275 putative outer membrane protein precursor K12543 lapE; outer membrane protein, adhesin transport system
D PADK2_24420 outer membrane protein OprJ K08721 oprJ; outer membrane protein, multidrug efflux system
D PADK2_12770 Multidrug efflux outer membrane protein OprN precursor K18300 oprN; outer membrane protein, multidrug efflux system
D PADK2_03630 putative outer membrane protein precursor K18308 opmD; outer membrane protein, multidrug efflux system
D PADK2_06760 putative outer membrane protein precursor K19593 opmE; outer membrane protein, multidrug efflux system
D PADK2_02155 Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D PADK2_14095 putative exopolysaccharide transporter K20987 pslD; polysaccharide biosynthesis/export protein PslD
D PADK2_13820 glucose-sensitive porin K07267 oprB; porin
D PADK2_08405 Glucose/carbohydrate outer membrane porin OprB precursor K07267 oprB; porin
D PADK2_03830 putative porin K07267 oprB; porin
D PADK2_20900 Basic amino acid, basic peptide and imipenem outer membrane porin OprD precursor K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_00950 putative porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_11150 proline porin OpdB K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_06100 putative outer membrane protein precursor K07277 SAM50; outer membrane protein insertion porin family
D PADK2_05325 hypothetical protein K17713 bamB; outer membrane protein assembly factor BamB
D PADK2_20685 putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D PADK2_24150 competence protein ComL K05807 bamD; outer membrane protein assembly factor BamD
D PADK2_25295 Outer membrane lipoprotein OmlA precursor K06186 bamE; outer membrane protein assembly factor BamE
D PADK2_12530 hypothetical protein K09800 tamB; translocation and assembly module TamB
D PADK2_23230 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D PADK2_23225 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D PADK2_03000 organic solvent tolerance protein OstA precursor K04744 lptD; LPS-assembly protein
D PADK2_04380 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D PADK2_17160 translocator protein PopB K23475 yopB; transloator
D PADK2_17155 translocator outer membrane protein PopD precursor K23476 yopD; transloator
D PADK2_04405 Putative Mg2+ and Co2+ transporter CorC K06189 corC; hemolysin (HlyC) family protein
D PADK2_07100 putative murein hydrolase exporter K06518 cidA; holin-like protein
D PADK2_04255 hypothetical protein K06518 cidA; holin-like protein
D PADK2_24585 lysine-specific permease K11733 lysP; lysine-specific permease
D PADK2_21370 aromatic amino acid transport protein AroP2 K11734 aroP; aromatic amino acid transport protein AroP
D PADK2_00660 gamma-aminobutyrate permease K11735 gabP; GABA permease
D PADK2_26980 putative amino acid permease K16234 hutT; histidine transporter
D PADK2_26395 putative amino acid permease K02205 rocE; arginine/ornithine permease
D PADK2_15445 putative amino acid permease K14052 puuP; putrescine importer
D PADK2_06355 amino acid ABC transporter permease K14052 puuP; putrescine importer
D PADK2_19670 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D PADK2_27355 arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PADK2_04210 putative transport protein K16238 eat; ethanolamine permease
D PADK2_25495 putative amino acid permease K20265 gadC; glutamate:GABA antiporter
D PADK2_02000 putative cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PADK2_04510 putative transporter K13283 fieF; ferrous-iron efflux pump FieF
D PADK2_23265 putative heavy-metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D PADK2_12645 Resistance-Nodulation-Cell Division (RND) divalent metal cation efflux transporter CzcA K15726 czcA; heavy metal efflux system protein
D PADK2_14430 CzcA family heavy metal efflux protein K07787 cusA; copper/silver efflux system protein
D PADK2_24425 Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD K18296 mexD; multidrug efflux pump
D PADK2_12775 RND multidrug efflux transporter MexF K18299 mexF; multidrug efflux pump
D PADK2_03645 hypothetical protein K18305 mexG; transmembrane protein
D PADK2_03635 putative Resistance-Nodulation-Cell Division (RND) efflux transporter K18307 mexI; multidrug efflux pump
D PADK2_05960 Resistance-Nodulation-cell Division (RND) efflux transporter K18303 mexK; multidrug efflux pump
D PADK2_18545 putative RND efflux transporter K21133 mexN; multidrug efflux pump
D PADK2_15555 multidrug efflux protein K18095 mexY; multidrug efflux pump
D PADK2_06755 putative RND efflux transporter K19594 gesB; gold/copper resistance efflux pump
D PADK2_02150 RND multidrug efflux transporter MexB K18138 acrB; multidrug efflux pump
D PADK2_22795 multidrug efflux protein K18138 acrB; multidrug efflux pump
D PADK2_00800 putative Resistance-Nodulation-Cell Division (RND) efflux transporter K21134 triC; multidrug efflux pump
D PADK2_11900 transporter hydrophobe/amphiphile efflux-1 (HAE1) family protein K19585 oqxB; multidrug efflux pump
D PADK2_12605 putative Resistance-Nodulation-Cell Division (RND) efflux transporter K07788 mdtB; multidrug efflux pump
D PADK2_12610 putative efflux transporter K07789 mdtC; multidrug efflux pump
D PADK2_26445 SMR multidrug efflux transporter K03297 emrE; small multidrug resistance pump
D PADK2_21760 putative transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PADK2_07975 putative transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PADK2_16240 putative transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PADK2_18020 multidrug efflux system protein MdtI K11742 mdtI; spermidine export protein MdtI
D PADK2_18015 putative drug efflux transporter K11743 mdtJ; spermidine export protein MdtJ
D PADK2_28965 putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D PADK2_25370 hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D PADK2_18830 hypothetical protein K11939 rhtA; inner membrane transporter RhtA
D PADK2_02440 putative permease K05786 rarD; chloramphenicol-sensitive protein RarD
D PADK2_06895 putative chloramphenicol-sensitive protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PADK2_07670 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PADK2_25555 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PADK2_06580 putative inner membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D PADK2_07925 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PADK2_11390 putative transporter K07084 yuiF; putative amino acid transporter
D PADK2_13665 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PADK2_20430 putative transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PADK2_25320 L-lactate permease K03303 lutP; lactate permease
D PADK2_04660 choline transporter K02168 betT; choline/glycine/proline betaine transport protein
D PADK2_28190 putative choline transporter K02168 betT; choline/glycine/proline betaine transport protein
D PADK2_28610 choline transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D PADK2_22365 phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D PADK2_21775 sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D PADK2_08155 actP; acetate permease K14393 actP; cation/acetate symporter
D PADK2_29140 gltP; glutamate/aspartate:proton symporter K11102 gltP; proton glutamate symport protein
D PADK2_00610 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D PADK2_19725 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D PADK2_15440 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D PADK2_08455 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D PADK2_16565 nhaB; sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D PADK2_06040 putative Na(+)/H(+) exchanger protein K24163 nhaK; monovalent cation/hydrogen antiporter
D PADK2_15000 putative transporter K24160 NHA1; sodium/hydrogen antiporter
D PADK2_26600 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D PADK2_04895 Na+/H+ antiporter NhaP K03316 nhaP; Na+:H+ antiporter
D PADK2_19605 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PADK2_29385 putative sodium/proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D PADK2_29330 potassium efflux transporter K26735 KEA4_5_6; K+:H+ antiporter
D PADK2_08275 potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D PADK2_00080 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D PADK2_02210 codB; cytosine permease K10974 codB; cytosine permease
D PADK2_24690 uracil permease K02824 uraA; uracil permease
D PADK2_09670 putative transporter K24206 uacT; uric acid transporter
D PADK2_18185 putative transporter K24206 uacT; uric acid transporter
D PADK2_01765 putative transporter K16345 xanP; xanthine permease XanP
D PADK2_00835 transporter K16345 xanP; xanthine permease XanP
D PADK2_25065 putative transporter K06901 pbuG; adenine/guanine/hypoxanthine permease
D PADK2_18125 putative transporter K06901 pbuG; adenine/guanine/hypoxanthine permease
D PADK2_28905 tryptophan permease K03835 mtr; tryptophan-specific transport protein
D PADK2_17450 benzoate transporter K05782 benE; benzoate membrane transport protein
D PADK2_11885 chromate transporter K07240 chrA; chromate transporter
D PADK2_22350 putative transporter K07240 chrA; chromate transporter
D PADK2_14310 chromate resistance protein K07240 chrA; chromate transporter
D PADK2_00145 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PADK2_12405 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PADK2_21635 manganese transport protein MntH K03322 mntH; manganese transport protein
D PADK2_22585 manganese transport protein MntH K03322 mntH; manganese transport protein
D PADK2_21280 C4-dicarboxylate-binding periplasmic protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PADK2_27340 putative c4-dicarboxylate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PADK2_24520 putative c4-dicarboxylate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PADK2_21275 putative C4-dicarboxylate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PADK2_27345 putative dicarboxylate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PADK2_27350 putative C4-dicarboxylate transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PADK2_21270 putative C4-dicarboxylate transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PADK2_05425 transporter K21393 yiaN; TRAP-type transport system large permease protein
D PADK2_05435 putative TRAP-type C4-dicarboxylate transport K21395 yiaO; TRAP-type transport system periplasmic protein
D PADK2_25595 hypothetical protein K03324 yjbB; phosphate:Na+ symporter
D PADK2_29110 phosphate:Na+ symporter, PNaS family K03324 yjbB; phosphate:Na+ symporter
D PADK2_28100 arsenite-activated ATPase (arsA) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PADK2_13885 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D PADK2_11870 putative sodium bile acid symporter family protein K03325 ACR3; arsenite transporter
D PADK2_28125 arsenical-resistance protein K03325 ACR3; arsenite transporter
D PADK2_20410 putative monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D PADK2_20405 putative monovalent cation/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D PADK2_20400 putative monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D PADK2_20395 putative monovalent cation/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D PADK2_20390 putative monovalent cation/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D PADK2_20385 putative monovalent cation/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D PADK2_24240 putative virulence factor, membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D PADK2_29075 putative permease K13936 mdcF; malonate transporter and related proteins
D PADK2_17020 putative permease K24180 mleP; malate permease and related proteins
D PADK2_00945 hypothetical protein K24180 mleP; malate permease and related proteins
D PADK2_21120 potassium uptake protein Kup K03549 kup; KUP system potassium uptake protein
D PADK2_22745 putative transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PADK2_27770 putative LysE family efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D PADK2_06015 amino acid transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein
D PADK2_17610 hypothetical protein K05835 rhtC; threonine efflux protein
D PADK2_28440 hypothetical protein K05835 rhtC; threonine efflux protein
D PADK2_11100 hypothetical protein K05835 rhtC; threonine efflux protein
D PADK2_09720 hypothetical protein K05835 rhtC; threonine efflux protein
D PADK2_25255 leucine export protein LeuE K11250 leuE; leucine efflux protein
D PADK2_02100 putative chemotaxis protein K06600 chpE; chemosensory pili system protein ChpE
D PADK2_15455 hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D PADK2_15460 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D PADK2_21940 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PADK2_14620 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D PADK2_21935 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PADK2_14615 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PADK2_21930 tricarboxylate transport protein TctC, putative K07795 tctC; putative tricarboxylic transport membrane protein
D PADK2_14610 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PADK2_20705 hypothetical protein K03548 perM; putative permease
D PADK2_00065 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D PADK2_05060 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D PADK2_25770 putative membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D PADK2_27545 inner membrane protein K05595 marC; multiple antibiotic resistance protein
D PADK2_22995 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PADK2_24590 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D PADK2_09820 hypothetical protein K23242 mntP; manganese efflux pump family protein
D PADK2_27765 hypothetical protein K07243 FTR; high-affinity iron transporter
D PADK2_24465 carbon starvation protein K23676 btsT; pyruvate/proton symporter
D PADK2_00995 hypothetical protein K03832 tonB; periplasmic protein TonB
D PADK2_02045 putative tonB domain protein K03832 tonB; periplasmic protein TonB
D PADK2_29395 TonB protein K03832 tonB; periplasmic protein TonB
D PADK2_22175 hypothetical protein K03832 tonB; periplasmic protein TonB
D PADK2_20825 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D PADK2_20835 TolA protein K03646 tolA; colicin import membrane protein
D PADK2_20830 tolB; translocation protein TolB K03641 tolB; TolB protein
D PADK2_01020 malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D PADK2_01030 malonate decarboxylase subunit delta K13931 mdcC; malonate decarboxylase delta subunit
D PADK2_04960 respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_04965 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_04975 respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PADK2_08650 secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PADK2_10195 secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PADK2_27300 multidrug resistance protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PADK2_19455 multidrug resistance efflux pump K03543 emrA; membrane fusion protein, multidrug efflux system
D PADK2_07240 metalloprotease secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D PADK2_19415 alkaline protease secretion protein AprE K12537 hasE; membrane fusion protein, type I secretion system
D PADK2_12640 Resistance-Nodulation-Cell Division (RND) divalent metal cation efflux membrane fusion protein CzcB precursor K15727 czcB; membrane fusion protein, heavy metal efflux system
D PADK2_14425 RND family efflux transporter MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D PADK2_16265 putative secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D PADK2_24430 Resistance-Nodulation-cell Division (RND) multidrug efflux membrane fusion protein MexC precursor K18295 mexC; membrane fusion protein, multidrug efflux system
D PADK2_12780 Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexE precursor K18298 mexE; membrane fusion protein, multidrug efflux system
D PADK2_03640 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K18306 mexH; membrane fusion protein, multidrug efflux system
D PADK2_05955 Resistance-Nodulation-cell Division (RND) efflux membrane fusion protein precursor K18302 mexJ; membrane fusion protein, multidrug efflux system
D PADK2_18550 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K21135 mexM; membrane fusion protein, multidrug efflux system
D PADK2_15550 periplasmic multidrug efflux lipoprotein precursor K18094 mexX; membrane fusion protein, multidrug efflux system
D PADK2_06750 putative RND efflux membrane fusion protein precursor K19595 gesA; membrane fusion protein, gold/copper resistance efflux system
D PADK2_22790 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PADK2_00790 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K21136 triA; membrane fusion protein, multidrug efflux system
D PADK2_00795 putative RND efflux membrane fusion protein precursor K21137 triB; membrane fusion protein, multidrug efflux system
D PADK2_11910 hypothetical protein K19586 oqxA; membrane fusion protein, multidrug efflux system
D PADK2_11905 membrane fusion protein MexE K19586 oqxA; membrane fusion protein, multidrug efflux system
D PADK2_12600 putative RND efflux membrane fusion protein precursor K07799 mdtA; membrane fusion protein, multidrug efflux system
D PADK2_13320 putative ABC export system, membrane fusion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D PADK2_15865 putative transporter K03811 pnuC; nicotinamide mononucleotide transporter
D PADK2_22710 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D PADK2_22705 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PADK2_22700 hypothetical protein K07490 feoC; ferrous iron transport protein C
D PADK2_18325 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PADK2_12440 putative transport protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PADK2_24620 putative magnesium transporter, MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PADK2_14925 putative Mg2+ transporter-C (MgtC) family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PADK2_18130 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D PADK2_11810 copper resistance protein D K07245 pcoD; copper resistance protein D
D PADK2_11815 copper resistance protein C K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:pdk02044]
D PADK2_26360 putative outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_24390 outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_07235 transport protein HasD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PADK2_19420 alkaline protease secretion protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PADK2_07240 metalloprotease secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D PADK2_19415 alkaline protease secretion protein AprE K12537 hasE; membrane fusion protein, type I secretion system
D PADK2_07245 outer membrane protein HasF K12538 hasF; outer membrane protein, type I secretion system
D PADK2_19410 alkaline protease secretion outer membrane protein AprF precursor K12538 hasF; outer membrane protein, type I secretion system
D PADK2_16270 ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PADK2_16265 putative secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D PADK2_16275 putative outer membrane protein precursor K12543 lapE; outer membrane protein, adhesin transport system
D PADK2_08815 secretion protein XcpP K02452 gspC; general secretion pathway protein C
D PADK2_16315 XphA K02452 gspC; general secretion pathway protein C
D PADK2_22255 hypothetical protein K02452 gspC; general secretion pathway protein C
D PADK2_08810 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PADK2_16310 secretion protein XqhA K02453 gspD; general secretion pathway protein D
D PADK2_22225 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PADK2_08820 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PADK2_22220 putative type II secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PADK2_27570 putative secretion pathway ATPase K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PADK2_23810 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PADK2_11270 putative type II secretion system protein K02455 gspF; general secretion pathway protein F
D PADK2_08825 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D PADK2_22215 putative type II secretion system protein K02455 gspF; general secretion pathway protein F
D PADK2_11275 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D PADK2_11280 putative type II secretion system protein K02456 gspG; general secretion pathway protein G
D PADK2_08830 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D PADK2_22245 HxcT pseudopilin K02456 gspG; general secretion pathway protein G
D PADK2_08835 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D PADK2_22260 HxcU putative pseudopilin K02457 gspH; general secretion pathway protein H
D PADK2_11285 type II secretion system protein K02458 gspI; general secretion pathway protein I
D PADK2_08840 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D PADK2_22250 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D PADK2_11290 putative type II secretion system protein K02459 gspJ; general secretion pathway protein J
D PADK2_08845 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D PADK2_22265 HxcW putative pseudopilin K02459 gspJ; general secretion pathway protein J
D PADK2_08850 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D PADK2_22240 putative type II secretion system protein K02460 gspK; general secretion pathway protein K
D PADK2_08855 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D PADK2_22235 type II secretion system protein K02461 gspL; general secretion pathway protein L
D PADK2_08860 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D PADK2_22230 type II secretion system protein K02462 gspM; general secretion pathway protein M
D PADK2_23590 type 4 prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PADK2_23560 type IV pilin structural subunit K02650 pilA; type IV pilus assembly protein PilA
D PADK2_23565 type 4 fimbrial biogenesis protein PilB K02652 pilB; type IV pilus assembly protein PilB
D PADK2_23585 pilin biogenesis protein K02653 pilC; type IV pilus assembly protein PilC
D PADK2_24210 type 4 fimbrial biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D PADK2_05300 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D PADK2_02055 twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PADK2_02060 twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PADK2_02065 twitching motility protein PilI K02659 pilI; twitching motility protein PilI
D PADK2_02070 twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D PADK2_02075 methyltransferase PilK K02661 pilK; type IV pilus assembly protein PilK
D PADK2_26715 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D PADK2_26710 type 4 fimbrial biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D PADK2_26705 type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D PADK2_26700 type 4 fimbrial biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D PADK2_26695 type 4 fimbrial biogenesis outer membrane protein PilQ precursor K02666 pilQ; type IV pilus assembly protein PilQ
D PADK2_01990 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D PADK2_01995 twitching motility protein PilU K02670 pilU; twitching motility protein PilU
D PADK2_24185 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D PADK2_24190 type 4 fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D PADK2_24195 type 4 fimbrial biogenesis protein PilX K02673 pilX; type IV pilus assembly protein PilX
D PADK2_24200 type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D PADK2_09555 type 4 fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D PADK2_16555 pilin biosynthetic protein K27041 fimL; scaffold protein FimL
D PADK2_24175 type 4 fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D PADK2_24180 type 4 fimbrial biogenesis protein FimU K08085 fimU; type IV fimbrial biogenesis protein FimU
D PADK2_08760 Motility protein FimV K08086 fimV; pilus assembly protein FimV
D PADK2_22380 Flp prepilin peptidase A, FppA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PADK2_22430 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PADK2_22425 putative type II secretion system protein K02280 cpaC; pilus assembly protein CpaC
D PADK2_22420 TadZ K02282 cpaE; pilus assembly protein CpaE
D PADK2_22415 TadA ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PADK2_22410 hypothetical protein K12510 tadB; tight adherence protein B
D PADK2_22405 TadC K12511 tadC; tight adherence protein C
D PADK2_22400 TadD K27079 tadD; tight adherence protein D
D PADK2_22390 TadG K27080 tadG; tight adherence protein G
D PADK2_22435 type IVb pilin, Flp K02651 flp; pilus assembly protein Flp/PilA
D PADK2_01975 YGGT family protein K02221 yggT; YggT family protein
D PADK2_08630 putative competence protein K02237 comEA; competence protein ComEA
D PADK2_09435 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D PADK2_17115 Type III secretion outer membrane protein PscC precursor K03219 yscC; type III secretion protein C
D PADK2_17110 type III export protein PscD K03220 yscD; type III secretion protein D
D PADK2_17100 type III export protein PscF K03221 yscF; type III secretion protein F
D PADK2_17085 type III export protein PscI K04053 yscI; type III secretion protein I
D PADK2_17080 pscJ type III export protein K03222 yscJ; type III secretion protein J
D PADK2_17075 type III export protein PscK K04054 yscK; type III secretion protein K
D PADK2_17070 type III secretion system protein K03223 yscL; type III secretion protein L
D PADK2_17215 type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D PADK2_17220 translocation protein in type III secretion K04056 yscO; type III secretion protein O
D PADK2_17225 translocation protein in type III secretion K04057 yscP; type III secretion protein P
D PADK2_17230 type III secretion system protein K03225 yscQ; type III secretion protein Q
D PADK2_17235 type III secretion system protein YscR K03226 yscR; type III secretion protein R
D PADK2_17240 putative translocation protein in type III secretion K03227 yscS; type III secretion protein S
D PADK2_17245 translocation protein in type III secretion K03228 yscT; type III secretion protein T
D PADK2_17250 translocation protein in type III secretion K03229 yscU; type III secretion protein U
D PADK2_17185 type III secretory apparatus protein PcrD K03230 yscV; type III secretion protein V
D PADK2_17210 Type III secretion outer membrane protein PopN precursor K04058 yscW; type III secretion protein W
D PADK2_17195 Yop proteins translocation protein X K04059 yscX; type III secretion protein X
D PADK2_17120 type III export apparatus protein K04049 yscB; type III secretion protein B
D PADK2_17105 type III export protein PscE K04050 yscE; type III secretion protein E
D PADK2_17095 type III secretion protein, YscG family K04051 yscG; type III secretion protein G
D PADK2_17090 type III export protein PscH K04052 yscH; type III secretion protein H
D PADK2_17190 hypothetical protein K04060 yscY; type III secretion protein Y
D PADK2_18465 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PADK2_18480 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PADK2_18360 putative FlhB domain protein K04061 flhB2; flagellar biosynthesis protein
D PADK2_20175 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PADK2_20165 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D PADK2_20160 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PADK2_18505 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PADK2_18500 flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PADK2_18495 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PADK2_18490 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PADK2_18485 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PADK2_12290 Cobyrinic acid a,c-diamide synthase K12055 K12055; chromosome partitioning related protein ParA
D PADK2_23660 chromosome partitioning related protein K12055 K12055; chromosome partitioning related protein ParA
D PADK2_11915 hypothetical protein K12070 traI; conjugal transfer pilus assembly protein TraI
D PADK2_24125 relaxase K12070 traI; conjugal transfer pilus assembly protein TraI
D PADK2_23970 TraG/TraD family protein K12071 traD; conjugal transfer pilus assembly protein TraD
D PADK2_12060 hypothetical protein K12071 traD; conjugal transfer pilus assembly protein TraD
D PADK2_05650 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PADK2_06690 serine protease K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D PADK2_27055 esterase EstA K12686 apeE; outer membrane lipase/esterase
D PADK2_00405 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D PADK2_13465 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL
D PADK2_17360 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D PADK2_00410 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D PADK2_13460 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D PADK2_17365 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D PADK2_00415 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D PADK2_13455 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D PADK2_17370 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D PADK2_00465 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D PADK2_13420 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D PADK2_17400 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D PADK2_00460 type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG
D PADK2_13425 type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG
D PADK2_17405 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D PADK2_00455 hypothetical protein K11897 impF; type VI secretion system protein ImpF
D PADK2_00440 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D PADK2_13440 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D PADK2_17415 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D PADK2_00435 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D PADK2_13445 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D PADK2_17420 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D PADK2_00430 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D PADK2_13470 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D PADK2_00445 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_13435 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_01310 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_18160 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_27865 secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PADK2_26945 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_01305 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_07815 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_18165 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_27860 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_11220 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_00495 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_00475 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_13400 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D PADK2_17410 hypothetical protein K11905 K11905; type VI secretion system protein
D PADK2_00420 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D PADK2_17375 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D PADK2_00470 putative ClpA/B-type chaperone K11907 vasG; type VI secretion system protein VasG
D PADK2_13415 ClpA/B-type protease K11907 vasG; type VI secretion system protein VasG
D PADK2_17395 putative ClpA/B-type protease K11907 vasG; type VI secretion system protein VasG
D PADK2_17425 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D PADK2_00400 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM
D PADK2_17380 hypothetical protein K11894 impI; type VI secretion system protein ImpI
D PADK2_00450 putative secretion protein K11898 impE; type VI secretion system protein ImpE
D PADK2_00390 serine/threonine-protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D PADK2_00425 hypothetical protein K11913 fha1; type VI secretion system protein
D PADK2_17390 transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator
D PADK2_17355 serine/threonine phosphoprotein phosphatase Stp1 K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
D PADK2_00395 PppA K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
D PADK2_17350 serine-threonine kinase Stk1 K11916 stk1; serine/threonine-protein kinase Stk1 [EC:2.7.11.-]
D PADK2_13475 transcriptional regulator K11917 sfa3; sigma-54 dependent transcriptional regulator
D PADK2_13450 hypothetical protein K11918 lip3; type VI secretion system protein
D PADK2_13430 hypothetical protein K11919 hsiF3; type VI secretion system lysozyme-related protein
D PADK2_03895 putative fimbrial subunit CupB1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D PADK2_15035 fimbrial subunit CupA1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D PADK2_20785 fimbrial subunit CupC1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D PADK2_15030 chaperone CupA2 K07346 fimC; fimbrial chaperone protein
D PADK2_24710 pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D PADK2_03905 usher CupB3 K07347 fimD; outer membrane usher protein
D PADK2_20775 usher CupC3 K07347 fimD; outer membrane usher protein
D PADK2_24715 hypothetical protein K07347 fimD; outer membrane usher protein
D PADK2_15025 usher CupA3 K07347 fimD; outer membrane usher protein
D PADK2_24695 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24700 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24720 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24705 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_22945 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PADK2_27135 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PADK2_05220 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PADK2_03290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PADK2_05225 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PADK2_25205 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PADK2_03455 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PADK2_05605 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PADK2_01875 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PADK2_05215 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PADK2_29580 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PADK2_26835 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PADK2_26840 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PADK2_26845 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pdk02042]
D PADK2_19920 exotoxin A precursor K11020 toxA; exotoxin A [EC:2.4.2.-]
D PADK2_05115 exoenzyme S K16635 exoS; exoenzyme S
D PADK2_00240 exoenzyme T K16636 exoT; exoenzyme T
D PADK2_14705 adenylate cyclase ExoY K16637 K16637; adenylate cyclase ExoY
D PADK2_28545 putative metal ion transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PADK2_05595 putative hemolysin containing a CBS domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PADK2_25650 putative hemolyin III K11068 hlyIII; hemolysin III
D PADK2_07675 non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D PADK2_21485 hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D PADK2_14690 hydrogen cyanide synthase HcnA K10814 hcnA; hydrogen cyanide synthase HcnA [EC:1.4.99.5]
D PADK2_14685 hydrogen cyanide synthase HcnB K10815 hcnB; hydrogen cyanide synthase HcnB [EC:1.4.99.5]
D PADK2_14680 hydrogen cyanide synthase HcnC K10816 hcnC; hydrogen cyanide synthase HcnC [EC:1.4.99.5]
C 02022 Two-component system [BR:pdk02022]
D PADK2_28540 two-component sensor PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PADK2_28535 two-component response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PADK2_19745 two-component sensor PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PADK2_19750 two-component response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PADK2_27515 AmgS K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PADK2_27520 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PADK2_19855 two-component sensor K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PADK2_19860 two-component response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D PADK2_08305 putative two-component response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PADK2_02330 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D PADK2_02325 DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D PADK2_11850 sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_12625 two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_10365 two-component sensor, CopS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_25920 putative two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_18535 putative two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_12630 putative two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_25915 two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_18540 putative two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_10370 two-component response regulator, CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_11845 transcriptional activator protein IrlR 2 K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_25355 PmrB: two-component regulator system signal sensor kinase PmrB K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PADK2_12845 putative two-component sensor K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PADK2_25350 two-component response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PADK2_12850 putative two-component response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D PADK2_17530 two-component sensor KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PADK2_17525 two-component response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PADK2_21915 putative two-component sensor K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PADK2_21920 putative two-component response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D PADK2_16675 putative two-component sensor K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D PADK2_16670 putative two-component response regulator K18073 parR; two-component system, OmpR family, response regulator ParR
D PADK2_11210 two-component sensor PfeS K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PADK2_21055 two-component sensor K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D PADK2_21060 two-component response regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D PADK2_11215 two-component response regulator PfeR K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D PADK2_08295 putative two-component sensor K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PADK2_03815 BfmR K02483 K02483; two-component system, OmpR family, response regulator
D PADK2_08370 two-component response regulator GltR K02483 K02483; two-component system, OmpR family, response regulator
D PADK2_11370 putative two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PADK2_04945 two-component sensor NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PADK2_04940 transcriptional regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PADK2_13385 putative transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PADK2_03925 putative response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PADK2_05770 putative two-component response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PADK2_09875 putative transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PADK2_21065 sensor/response regulator hybrid K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PADK2_11730 response regulator GacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PADK2_04595 two-component sensor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PADK2_12315 sensor/response regulator hybrid K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PADK2_00175 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_04585 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_09120 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_22370 two-component sensor PprA K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D PADK2_22385 two-component response regulator, PprB K27077 pprB; two-component system, NarL family, response regulator PprB
D PADK2_27840 alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PADK2_27835 alginate biosynthesis regulatory protein AlgR K08083 algR; two-component system, LytTR family, response regulator AlgR
D PADK2_27115 two-component sensor NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PADK2_27120 two-component response regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PADK2_25100 two-component response regulator CbrB K07713 zraR; two-component system, NtrC family, response regulator HydG
D PADK2_24160 two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D PADK2_24165 two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D PADK2_27330 two-component sensor K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PADK2_29300 MifS K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PADK2_27335 putative two-component response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PADK2_29295 putative two-component response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PADK2_29160 putative two-component sensor K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D PADK2_29155 two-component response regulator AlgB K11384 algB; two-component system, NtrC family, response regulator AlgB
D PADK2_12375 putative two-component sensor K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D PADK2_00895 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_18435 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_00900 putative two-component response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PADK2_18445 two-component response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PADK2_00870 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PADK2_18430 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PADK2_07525 putative chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PADK2_02080 putative component of chemotactic signal transduction system K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PADK2_02055 twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PADK2_02060 twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PADK2_02085 methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D PADK2_05820 chemotaxis sensor/effector fusion protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PADK2_05830 putative two-component response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D PADK2_05825 chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D PADK2_03690 putative two-component response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D PADK2_20190 two-component sensor K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PADK2_20185 two-component response regulator K10943 flrC; two-component system, response regulator FlrC
D PADK2_18960 putative two-component sensor K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D PADK2_18965 putative two-component response regulator K17061 aauR; two-component system, response regulator AauR
D PADK2_23400 putative two-component sensor K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PADK2_23395 putative two-component response regulator K15012 regA; two-component system, response regulator RegA
D PADK2_10255 sensor/response regulator hybrid K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D PADK2_17655 putative sensor/response regulator hybrid K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PADK2_15775 putative two-component sensor K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PADK2_07545 putative histidine-containing phosphotransfer (HPt) domain K20976 hptB; histidine phosphotransfer protein HptB
D PADK2_20790 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D PADK2_07540 putative two-component response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D PADK2_16750 nitrate-binding protein NasS K22067 nasS; two-component system, oxyanion-binding sensor
D PADK2_16755 response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D PADK2_07455 aliphatic amidase regulator K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D PADK2_04450 Lost Adherence Sensor, LadS K20971 ladS; two-component system, sensor histidine kinase LadS
D PADK2_25765 RetS (Regulator of Exopolysaccharide and Type III Secretion) K20972 retS; two-component system, sensor histidine kinase RetS
D PADK2_06950 putative sensor/response regulator hybrid K20972 retS; two-component system, sensor histidine kinase RetS
C 02035 Bacterial motility proteins [BR:pdk02035]
D PADK2_00895 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_18435 putative two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PADK2_00890 putative purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_18405 putative purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_18410 putative CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D PADK2_00875 putative chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PADK2_00880 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PADK2_07530 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PADK2_00870 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PADK2_18430 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PADK2_00900 putative two-component response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PADK2_18445 two-component response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PADK2_18440 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D PADK2_07525 putative chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D PADK2_00885 aerotaxis transducer Aer2 K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_00905 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_09770 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_12365 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_12415 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_11385 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_11395 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22355 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22455 chemotactic transducer PctA K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_22460 chemotactic transducer PctB K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17475 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_26065 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_26855 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_19395 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_15985 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_23530 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_24610 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17670 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_18595 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D PADK2_17910 aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D PADK2_20165 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D PADK2_20160 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PADK2_20155 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D PADK2_18500 flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PADK2_18495 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PADK2_18490 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PADK2_18485 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PADK2_18465 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PADK2_18480 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PADK2_20170 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D PADK2_18510 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PADK2_18505 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PADK2_20175 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D PADK2_20260 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D PADK2_07520 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PADK2_20265 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D PADK2_18515 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PADK2_27690 flagellar basal body-associated protein FliL-like protein K02415 fliL; flagellar protein FliL
D PADK2_20180 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PADK2_18520 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PADK2_20295 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PADK2_20290 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PADK2_20285 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PADK2_20275 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PADK2_20270 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PADK2_20255 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PADK2_20280 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PADK2_20250 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PADK2_20245 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PADK2_07510 putative export chaperone involved in flagellar synthesis K02399 flgN; flagellar biosynthesis protein FlgN
D PADK2_06735 putative outer membrane protein precursor K21218 motY; sodium-type flagellar protein MotY
D PADK2_20220 flagellin type B K02406 fliC; flagellin
D PADK2_20210 flagellar capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D PADK2_20205 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D PADK2_20200 hypothetical protein K02423 fliT; flagellar protein FliT
D PADK2_18450 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D PADK2_26260 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D PADK2_18425 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D PADK2_26255 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PADK2_18420 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D PADK2_20195 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D PADK2_20190 two-component sensor K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D PADK2_20185 two-component response regulator K10943 flrC; two-component system, response regulator FlrC
D PADK2_01565 L-cysteine transporter of ABC system FliY K02424 tcyA; L-cystine transport system substrate-binding protein
D PADK2_07515 FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PADK2_20215 hypothetical protein K06603 flaG; flagellar protein FlaG
D PADK2_18460 flhF; flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D PADK2_18455 flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D PADK2_02055 twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D PADK2_02060 twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D PADK2_02065 twitching motility protein PilI K02659 pilI; twitching motility protein PilI
D PADK2_02070 twitching motility protein PilJ K02660 pilJ; twitching motility protein PilJ
D PADK2_02075 methyltransferase PilK K02661 pilK; type IV pilus assembly protein PilK
D PADK2_02080 putative component of chemotactic signal transduction system K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D PADK2_24165 two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D PADK2_24160 two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D PADK2_01990 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D PADK2_01995 twitching motility protein PilU K02670 pilU; twitching motility protein PilU
D PADK2_02085 methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D PADK2_02090 chemotaxis protein K06598 chpC; chemosensory pili system protein ChpC
D PADK2_02095 putative transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD
D PADK2_02100 putative chemotaxis protein K06600 chpE; chemosensory pili system protein ChpE
D PADK2_23560 type IV pilin structural subunit K02650 pilA; type IV pilus assembly protein PilA
D PADK2_23565 type 4 fimbrial biogenesis protein PilB K02652 pilB; type IV pilus assembly protein PilB
D PADK2_23585 pilin biogenesis protein K02653 pilC; type IV pilus assembly protein PilC
D PADK2_23590 type 4 prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PADK2_05300 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D PADK2_26695 type 4 fimbrial biogenesis outer membrane protein PilQ precursor K02666 pilQ; type IV pilus assembly protein PilQ
D PADK2_26700 type 4 fimbrial biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D PADK2_26705 type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D PADK2_26710 type 4 fimbrial biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D PADK2_26715 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D PADK2_09555 type 4 fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D PADK2_24185 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D PADK2_24190 type 4 fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D PADK2_24195 type 4 fimbrial biogenesis protein PilX K02673 pilX; type IV pilus assembly protein PilX
D PADK2_24200 type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D PADK2_24205 hypothetical protein K02675 pilY2; type IV pilus assembly protein PilY2
D PADK2_24210 type 4 fimbrial biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D PADK2_22435 type IVb pilin, Flp K02651 flp; pilus assembly protein Flp/PilA
D PADK2_22380 Flp prepilin peptidase A, FppA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PADK2_22430 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PADK2_22425 putative type II secretion system protein K02280 cpaC; pilus assembly protein CpaC
D PADK2_22420 TadZ K02282 cpaE; pilus assembly protein CpaE
D PADK2_22415 TadA ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PADK2_03895 putative fimbrial subunit CupB1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D PADK2_15035 fimbrial subunit CupA1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D PADK2_20785 fimbrial subunit CupC1 K07345 fimA; major type 1 subunit fimbrin (pilin)
D PADK2_15030 chaperone CupA2 K07346 fimC; fimbrial chaperone protein
D PADK2_24710 pili assembly chaperone K07346 fimC; fimbrial chaperone protein
D PADK2_03905 usher CupB3 K07347 fimD; outer membrane usher protein
D PADK2_20775 usher CupC3 K07347 fimD; outer membrane usher protein
D PADK2_24715 hypothetical protein K07347 fimD; outer membrane usher protein
D PADK2_15025 usher CupA3 K07347 fimD; outer membrane usher protein
D PADK2_24695 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24700 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24720 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D PADK2_24705 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pdk04812]
D PADK2_23335 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PADK2_22965 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PADK2_22970 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PADK2_08110 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D PADK2_08105 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D PADK2_08100 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D PADK2_26635 putative ATPase nvolved in chromosome partitioning K03496 parA; chromosome partitioning protein
D PADK2_29555 chromosome partitioning protein Soj K03496 parA; chromosome partitioning protein
D PADK2_18415 putative plasmid partitioning protein K03496 parA; chromosome partitioning protein
D PADK2_11895 ParB domain-containing protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PADK2_29550 chromosome partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pdk04147]
D PADK2_17730 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PADK2_20340 HSP90 family protein K04079 HSP90A; molecular chaperone HtpG
D PADK2_06165 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PADK2_08355 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PADK2_09340 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PADK2_02785 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PADK2_22560 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PADK2_18230 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PADK2_08190 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PADK2_28715 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PADK2_06720 putative peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PADK2_21465 putative alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PADK2_22850 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PADK2_25275 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PADK2_25130 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PADK2_05480 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PADK2_03285 elongation factor Tu K02358 tuf; elongation factor Tu
D PADK2_03345 elongation factor Tu K02358 tuf; elongation factor Tu
D PADK2_03205 putative HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PADK2_07810 putative HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PADK2_19110 putative HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PADK2_15515 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PADK2_07785 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_07790 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_17625 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PADK2_12465 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_04700 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_25400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_15645 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_17010 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PADK2_02180 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PADK2_05910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PADK2_18005 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PADK2_27845 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PADK2_06740 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PADK2_02015 putative cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PADK2_19665 N-Dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D PADK2_02225 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PADK2_15610 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PADK2_27045 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PADK2_14900 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PADK2_06430 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PADK2_06445 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PADK2_18285 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PADK2_01470 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_01480 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_07490 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_15450 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_17885 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_27090 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_29350 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PADK2_27740 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PADK2_21375 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PADK2_21345 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PADK2_07805 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PADK2_01575 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PADK2_25755 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PADK2_14025 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_25630 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_17770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PADK2_09600 electron transfer flavoprotein alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D PADK2_08420 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PADK2_28935 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PADK2_25210 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PADK2_27030 outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:pdk02048]
D PADK2_13140 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D PADK2_13135 CRISPR-associated helicase Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PADK2_13130 hypothetical protein K19127 csy1; CRISPR-associated protein Csy1
D PADK2_13125 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D PADK2_13120 hypothetical protein K19129 csy3; CRISPR-associated protein Csy3
D PADK2_13115 hypothetical protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D PADK2_23725 DNA adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PADK2_10875 HNH endonuclease typeIV restriction enzyme K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D PADK2_11005 hypothetical protein K19048 symE; toxic protein SymE
D PADK2_24100 putative plasmid stablization protein K19092 parE1_3_4; toxin ParE1/3/4
D PADK2_24095 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D PADK2_24830 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D PADK2_08025 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PADK2_24825 hypothetical protein K21498 higA-1; antitoxin HigA-1
D PADK2_22965 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PADK2_23335 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PADK2_26310 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PADK2_26325 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PADK2_08660 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PADK2_21895 hypothetical protein K19168 cptA; toxin CptA
D PADK2_21900 hypothetical protein K09159 cptB; antitoxin CptB
D PADK2_05255 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_15335 putative pyridoxal-phosphate dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PADK2_10970 hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
D PADK2_10975 hypothetical protein K19170 dndC; DNA sulfur modification protein DndC
D PADK2_10980 hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
D PADK2_10985 DNA sulfur modification protein DndE K19172 dndE; DNA sulfur modification protein DndE
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:pdk04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pdk04090]
C 01504 Antimicrobial resistance genes [BR:pdk01504]
D PADK2_29310 putative beta-lactamase K18973 blaOXA-50; beta-lactamase class D OXA-50 [EC:3.5.2.6]
D PADK2_03765 ampC; beta-lactamase/D-alanine carboxypeptidase K20320 blaPDC; beta-lactamase class C PDC [EC:3.5.2.6]
D PADK2_16365 streptomycin 3''-phosphotransferase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D PADK2_20015 major facilitator superfamily (MFS) transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PADK2_02355 putative streptogramin lyase K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D PADK2_01640 hypothetical protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D PADK2_07590 major facilitator superfamily (MFS) transporter K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D PADK2_22105 chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D PADK2_05050 putative acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D PADK2_22120 acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D PADK2_19235 major facilitator superfamily (MFS) transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D PADK2_20025 putative fosfomycin resistance protein K21253 fosA; glutathione S-transferase fosA [EC:2.5.1.18]
D PADK2_16675 putative two-component sensor K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D PADK2_16670 putative two-component response regulator K18073 parR; two-component system, OmpR family, response regulator ParR
D PADK2_11850 sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_12625 two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_10365 two-component sensor, CopS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_25920 putative two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_18535 putative two-component sensor K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D PADK2_12630 putative two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_25915 two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_18540 putative two-component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_10370 two-component response regulator, CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_11845 transcriptional activator protein IrlR 2 K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D PADK2_12785 transcriptional regulator MexT K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D PADK2_20900 Basic amino acid, basic peptide and imipenem outer membrane porin OprD precursor K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_00950 putative porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_11150 proline porin OpdB K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D PADK2_21955 hypothetical protein K18346 vanW; vancomycin resistance protein VanW
D PADK2_05420 peptidase M15D, VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PADK2_21105 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PADK2_19745 two-component sensor PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PADK2_19750 two-component response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PADK2_02135 multidrug resistance operon repressor MexR K18131 mexR; MarR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D PADK2_22790 putative Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PADK2_02150 RND multidrug efflux transporter MexB K18138 acrB; multidrug efflux pump
D PADK2_22795 multidrug efflux protein K18138 acrB; multidrug efflux pump
D PADK2_02155 Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D PADK2_24435 transcriptional regulator NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D PADK2_24430 Resistance-Nodulation-cell Division (RND) multidrug efflux membrane fusion protein MexC precursor K18295 mexC; membrane fusion protein, multidrug efflux system
D PADK2_24425 Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD K18296 mexD; multidrug efflux pump
D PADK2_12780 Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexE precursor K18298 mexE; membrane fusion protein, multidrug efflux system
D PADK2_12775 RND multidrug efflux transporter MexF K18299 mexF; multidrug efflux pump
D PADK2_12770 Multidrug efflux outer membrane protein OprN precursor K18300 oprN; outer membrane protein, multidrug efflux system
D PADK2_05950 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D PADK2_05955 Resistance-Nodulation-cell Division (RND) efflux membrane fusion protein precursor K18302 mexJ; membrane fusion protein, multidrug efflux system
D PADK2_05960 Resistance-Nodulation-cell Division (RND) efflux transporter K18303 mexK; multidrug efflux pump
D PADK2_15545 transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D PADK2_15550 periplasmic multidrug efflux lipoprotein precursor K18094 mexX; membrane fusion protein, multidrug efflux system
D PADK2_15555 multidrug efflux protein K18095 mexY; multidrug efflux pump
D PADK2_25360 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PADK2_06750 putative RND efflux membrane fusion protein precursor K19595 gesA; membrane fusion protein, gold/copper resistance efflux system
D PADK2_06755 putative RND efflux transporter K19594 gesB; gold/copper resistance efflux pump
D PADK2_06760 putative outer membrane protein precursor K19593 opmE; outer membrane protein, multidrug efflux system
D PADK2_26360 putative outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_24390 outer membrane protein precursor K12340 tolC; outer membrane protein
D PADK2_00175 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_04585 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_09120 putative two-component response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D PADK2_15365 putative transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:pdk00536]
D PADK2_00210 hemagglutinin K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pdk00537]
D PADK2_07805 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PADK2_13190 treA; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D PADK2_28715 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pdk03100]
D PADK2_t29685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29703 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29721 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29603 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29623 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29627 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PADK2_t29597 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29667 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29677 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29697 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PADK2_t29695 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PADK2_t29621 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PADK2_t29619 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PADK2_t29659 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PADK2_t29633 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PADK2_t29635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PADK2_t29655 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PADK2_t29699 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PADK2_t29625 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PADK2_t29629 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PADK2_t29641 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PADK2_t29683 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29607 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29643 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29653 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PADK2_t29661 tRNA-His K14226 tRNA-His; tRNA His
D PADK2_t29665 tRNA-His K14226 tRNA-His; tRNA His
D PADK2_t29601 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PADK2_t29687 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PADK2_t29705 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PADK2_t29723 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PADK2_t29709 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29613 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29657 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29663 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29713 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PADK2_t29671 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PADK2_t29691 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PADK2_t29701 tRNA-Met K14230 tRNA-Met; tRNA Met
D PADK2_t29599 tRNA-Met K14230 tRNA-Met; tRNA Met
D PADK2_t29673 tRNA-Met K14230 tRNA-Met; tRNA Met
D PADK2_t29707 tRNA-Met K14230 tRNA-Met; tRNA Met
D PADK2_t29717 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PADK2_t29693 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PADK2_t29637 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PADK2_t29649 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PADK2_t29651 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PADK2_t29669 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PADK2_t29679 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PADK2_t29639 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PADK2_t29719 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PADK2_t29689 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PADK2_t29609 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PADK2_t29611 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PADK2_t29605 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PADK2_t29617 tRNA-Val K14237 tRNA-Val; tRNA Val
D PADK2_t29647 tRNA-Val K14237 tRNA-Val; tRNA Val
D PADK2_t29631 tRNA-Val K14237 tRNA-Val; tRNA Val
D PADK2_t29711 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PADK2_r29735 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29737 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29739 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29733 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PADK2_r29743 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29747 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29741 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PADK2_r29729 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29731 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29727 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PADK2_r29725 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PADK2_28665 3-hydroxybutyryl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D PADK2_21985 putative 3-hydroxyisobutyrate dehydrogenase K19711 E1.1.1.387; L-serine 3-dehydrogenase (NAD+) [EC:1.1.1.387]
D PADK2_20120 putative dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PADK2_16995 putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D PADK2_01835 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D PADK2_28140 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D PADK2_08875 2,4-dienoyl-CoA reductase FadH1 K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PADK2_25550 2,4-dienoyl-CoA reductase FadH2 K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PADK2_14670 putative NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D PADK2_15715 pyrroloquinoline quinone biosynthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D PADK2_13370 putative oxidoreductase K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D PADK2_16245 putative oxidoreductase K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D PADK2_13375 aldehyde dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D PADK2_16250 putative oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D PADK2_09590 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D PADK2_24740 putative oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D PADK2_00115 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PADK2_11250 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PADK2_27695 putative oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PADK2_21390 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PADK2_20570 2-nitropropane Dioxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PADK2_12330 hypothetical protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D PADK2_08210 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PADK2_15845 azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PADK2_21765 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PADK2_00710 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D PADK2_12840 hypothetical protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D PADK2_24285 putative cytochrome c K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D PADK2_26585 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PADK2_10240 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PADK2_17595 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PADK2_20520 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PADK2_19715 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PADK2_11610 glutathione S-transferase domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PADK2_24925 TMAO/DMSO reductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D PADK2_21115 cytochrome b561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D PADK2_24365 cytochrome c551 peroxidase precursor K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PADK2_14735 non-heme catalase KatN K07217 ydbD; manganese catalase [EC:1.11.1.6]
D PADK2_11065 chloroperoxidase precursor K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PADK2_20700 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PADK2_12580 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PADK2_07010 putative antioxidant protein K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PADK2_00705 alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PADK2_00315 osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PADK2_10125 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PADK2_10625 putative peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PADK2_08125 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PADK2_19590 pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PADK2_13180 putative pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PADK2_19615 pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PADK2_11650 putative enzyme K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D PADK2_00970 putative alkylsulfatase K22303 atsK; alkyl sulfatase [EC:1.14.11.77]
D PADK2_23505 Fe(II)-dependent oxygenase superfamily protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D PADK2_11330 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PADK2_13335 L-ornithine N5-oxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D PADK2_13640 putative xenobiotic compound monooxygenase, DszA family protein K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D PADK2_13530 DszA family monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D PADK2_12170 putative mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D PADK2_07285 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PADK2_24515 putative oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PADK2_20945 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PADK2_11875 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PADK2_13880 ArsC protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PADK2_28120 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PADK2_11865 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PADK2_15705 pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D PADK2_11020 putative radical activating enzyme K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PADK2_16045 putative radical-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PADK2_06220 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PADK2_29470 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PADK2_15300 carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D PADK2_26520 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D PADK2_01050 putative acyl transferase K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D PADK2_25620 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D PADK2_07865 3-oxoacyl-(acyl carrier protein) synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D PADK2_04400 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PADK2_22670 phospholipid/glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D PADK2_11890 GCN5-like N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D PADK2_22080 hypothetical protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D PADK2_01235 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PADK2_18570 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PADK2_25820 putative phosphinothricin N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D PADK2_11575 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PADK2_10010 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D PADK2_11570 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D PADK2_01025 triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D PADK2_06310 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PADK2_18590 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PADK2_01710 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PADK2_09385 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PADK2_16840 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PADK2_06985 hypothetical protein K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D PADK2_26565 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PADK2_12095 reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D PADK2_23915 reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D PADK2_01045 phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D PADK2_26610 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PADK2_18775 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D PADK2_05675 hypothetical protein K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D PADK2_26780 poly(3-hydroxyalkanoate) depolymerase K22250 phaZ; poly(3-hydroxyoctanoate) depolymerase [EC:3.1.1.76]
D PADK2_05875 putative phophatase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PADK2_11200 putative hydrolase K23722 pfeE; iron(III)-enterobactin esterase [EC:3.1.1.108]
D PADK2_28660 putative thioesterase K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33]
D PADK2_08680 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PADK2_10410 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PADK2_28380 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PADK2_27440 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PADK2_08325 putative PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PADK2_17630 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PADK2_05195 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PADK2_25380 cyclic di-GMP phosphodiesterase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D PADK2_03780 putative HDIG domain protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D PADK2_00155 choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D PADK2_22000 SDS hydrolase SdsA1 K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D PADK2_10740 DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D PADK2_10045 secretion protein MttC K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PADK2_06545 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PADK2_09560 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PADK2_21645 AmpDh3 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PADK2_00095 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PADK2_20060 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PADK2_13340 penicillin acylase-related protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D PADK2_20525 QuiP K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D PADK2_06350 hypothetical protein K18540 ramA; (R)-amidase [EC:3.5.1.100]
D PADK2_23305 putative carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PADK2_01430 3-guanidinopropionase K18459 gpuA; guanidinopropionase [EC:3.5.3.17]
D PADK2_00720 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D PADK2_09495 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D PADK2_08985 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PADK2_10000 moxR protein, putative K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PADK2_22525 putative methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PADK2_01015 putative esterase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D PADK2_01035 malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D PADK2_01040 malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D PADK2_04120 putative racemase K22209 tarD; D(-)-tartrate dehydratase [EC:4.2.1.81]
D PADK2_26235 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PADK2_11235 serine/threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D PADK2_06005 putative pyridoxal-phosphate dependent enzyme K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D PADK2_05755 putative peptidyl-prolyl cis-trans isomerase, FkbP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PADK2_22155 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PADK2_02775 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D PADK2_04225 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PADK2_24355 RNA 3'-terminal-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D PADK2_06815 electron transport complex protein rnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PADK2_06820 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D PADK2_06825 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PADK2_09355 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D PADK2_09360 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D PADK2_09365 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PADK2_09370 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D PADK2_09375 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D PADK2_09380 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D PADK2_17975 cation-transporting P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PADK2_05890 putative metal-transporting P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D PADK2_12230 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D PADK2_25610 magnesium-transporting ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D PADK2_25075 putative DNA-binding transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D PADK2_27410 hypothetical protein K02379 fdhD; FdhD protein
D PADK2_05280 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D PADK2_11075 ferredoxin K05524 fdxA; ferredoxin
D PADK2_06235 ferredoxin I K05524 fdxA; ferredoxin
D PADK2_06810 electron transport complex protein rnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PADK2_06805 electron transport complex RsxE subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PADK2_06830 electron transport complex protein RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PADK2_07090 flavodoxin K06205 mioC; MioC protein
D PADK2_05260 scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PADK2_02640 putative dinitrification protein NorD K02448 norD; nitric oxide reductase NorD protein
D PADK2_02620 putative cytochrome c oxidase subunit K02164 norE; nitric oxide reductase NorE protein
D PADK2_02615 regulatory protein NirQ K04748 norQ; nitric oxide reductase NorQ protein
D PADK2_19770 NapD protein of periplasmic nitrate reductase K02570 napD; periplasmic nitrate reductase NapD
D PADK2_19765 ferredoxin protein NapF K02572 napF; ferredoxin-type protein NapF
D PADK2_19760 periplasmic nitrate reductase protein NapE K02571 napE; periplasmic nitrate reductase NapE
D PADK2_19785 cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC
D PADK2_09595 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D PADK2_02600 putative c-type cytochrome precursor K19344 nirC; cytochrome c55X
D PADK2_02595 heme d1 biosynthesis protein NirF K19345 nirF; protein NirF
D PADK2_00195 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D PADK2_04460 acyl-CoA dehydrogenase domain-containing protein K09456 aidB; putative acyl-CoA dehydrogenase
D PADK2_28195 phosphorylcholine phosphatase K21830 pchP; phosphorylcholine phosphatase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PADK2_21475 putative sulfate transport protein CysZ K06203 cysZ; CysZ protein
D PADK2_18265 ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D PADK2_12505 putative ring-cleaving dioxygenase K08234 yaeR; glyoxylase I family protein
D PADK2_01985 putative PLP dependent enzyme K06997 yggS; PLP dependent protein
D PADK2_00670 hypothetical protein K21700 bauB; beta-alanine degradation protein BauB
D PADK2_07950 hypothetical protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D PADK2_06650 alginate biosynthetic protein AlgK precursor K19292 algK; alginate biosynthesis protein AlgK
D PADK2_14895 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D PADK2_22475 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PADK2_09635 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D PADK2_27815 putative enzyme of heme biosynthesis K02498 hemY; HemY protein
D PADK2_02570 heme d1 biosynthesis protein NirJ K24868 nirJ; heme d1 biosynthesis protein
D PADK2_26820 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D PADK2_26815 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D PADK2_27980 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D PADK2_04770 Putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D PADK2_09655 magnesium chelatase subunit ChlD K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
D PADK2_02740 polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
D PADK2_03720 putative monooxygenase K18004 pqsL; HQNO biosynthesis monooxygenase PqsL
D PADK2_19620 putative oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PADK2_26095 putative phospholipase K21831 choE; cholinesterase
D PADK2_10055 hypothetical protein K15977 K15977; putative oxidoreductase
D PADK2_03800 hypothetical protein K15977 K15977; putative oxidoreductase
D PADK2_05020 carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PADK2_11550 cold-shock protein CspD K03704 cspA; cold shock protein
D PADK2_07970 cold acclimation protein B K03704 cspA; cold shock protein
D PADK2_02290 putative cold-shock protein K03704 cspA; cold shock protein
D PADK2_20885 cold-shock protein K03704 cspA; cold shock protein
D PADK2_19850 putative cold-shock protein K03704 cspA; cold shock protein
D PADK2_27805 anti-RNA polymerase sigma 70 factor K07740 rsd; regulator of sigma D
D PADK2_27975 hypothetical protein K04752 glnK; nitrogen regulatory protein P-II 2
D PADK2_27525 hypothetical protein K06959 tex; protein Tex
C 99974 Translation
D PADK2_27680 putative ATP-binding/permease fusion ABC transporter K13926 rbbA; ribosome-dependent ATPase
D PADK2_06270 putative metallo-beta-lactamase superfamily protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D PADK2_21080 putative lipoprotein K03668 hslJ; heat shock protein HslJ
D PADK2_11555 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PADK2_16665 tig; trigger factor K03545 tig; trigger factor
D PADK2_24920 putative sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D PADK2_25520 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D PADK2_25945 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D PADK2_25950 urease accessory protein UreF K03188 ureF; urease accessory protein
D PADK2_25955 urease accessory protein UreG K03189 ureG; urease accessory protein
D PADK2_25810 urease accessory protein K03190 ureD; urease accessory protein
D PADK2_25960 hypothetical protein K03192 ureJ; urease accessory protein
D PADK2_25310 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D PADK2_28185 hypothetical protein K07391 comM; magnesium chelatase family protein
D PADK2_27985 putative Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D PADK2_01545 putative proline hydroxylase K07394 K07394; SM-20-related protein
D PADK2_17030 putative proteasome-type protease K07395 K07395; putative proteasome-type protease
D PADK2_00310 putative protein-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase
D PADK2_21410 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D PADK2_03190 putative redox protein K07397 yhfA; putative redox protein
D PADK2_19625 hypothetical protein K07397 yhfA; putative redox protein
D PADK2_16420 hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
D PADK2_07580 selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein
D PADK2_24535 putative xanthine dehydrogenase accessory factor X K07402 xdhC; xanthine dehydrogenase accessory factor
D PADK2_18110 putative xanthine dehydrogenase accessory factor X K07402 xdhC; xanthine dehydrogenase accessory factor
D PADK2_02265 putative membrane-bound protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D PADK2_22890 putative methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PADK2_11960 DNA repair protein RadC 1 K03630 radC; DNA repair protein RadC
D PADK2_28330 hypothetical protein K03630 radC; DNA repair protein RadC
D PADK2_20530 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D PADK2_28165 ATP-dependent endonuclease family protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PADK2_14145 putative conjugative transposon DNA recombination protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PADK2_23050 hypothetical protein K07460 yraN; putative endonuclease
D PADK2_05045 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D PADK2_00105 putative Rossmann fold nucleotide-binding protein K04096 smf; DNA processing protein
D PADK2_11595 recombination factor protein RarA K07478 ycaJ; putative ATPase
D PADK2_14470 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D PADK2_08565 hypothetical protein K07483 K07483; transposase
D PADK2_10835 hypothetical protein K07483 K07483; transposase
D PADK2_10885 hypothetical protein K07483 K07483; transposase
D PADK2_13160 hypothetical protein K07483 K07483; transposase
D PADK2_19880 hypothetical protein K07483 K07483; transposase
D PADK2_21585 hypothetical protein K07483 K07483; transposase
D PADK2_23575 hypothetical protein K07483 K07483; transposase
D PADK2_00215 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D PADK2_00220 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D PADK2_08570 hypothetical protein K07497 K07497; putative transposase
D PADK2_10840 hypothetical protein K07497 K07497; putative transposase
D PADK2_10880 hypothetical protein K07497 K07497; putative transposase
D PADK2_13155 hypothetical protein K07497 K07497; putative transposase
D PADK2_19875 hypothetical protein K07497 K07497; putative transposase
D PADK2_21580 hypothetical protein K07497 K07497; putative transposase
D PADK2_23570 hypothetical protein K07497 K07497; putative transposase
D PADK2_11785 transposase K07497 K07497; putative transposase
D PADK2_11790 transposase subfamily protein K07497 K07497; putative transposase
D PADK2_14500 hypothetical protein K07497 K07497; putative transposase
D PADK2_23925 integrase catalytic subunit K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PADK2_18055 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PADK2_10550 putative transporter, formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein
D PADK2_21735 putative amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D PADK2_15255 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D PADK2_16570 putative amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PADK2_29085 putative citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D PADK2_02260 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PADK2_27555 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PADK2_01425 3-guanidinopropionate transport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D PADK2_18620 putative sodium:solute symport protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D PADK2_12575 putative sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PADK2_14015 putative AGCS sodium/alanine/glycine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PADK2_06135 putative amino acid permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PADK2_15800 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PADK2_17755 branched chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PADK2_07980 transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PADK2_17455 bile acid/Na+ symporter family transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PADK2_02230 putative transporter K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PADK2_02395 putative permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PADK2_26990 putative permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D PADK2_08320 intracellular septation protein A K06190 ispZ; intracellular septation protein
D PADK2_02955 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D PADK2_27160 putative membrane-bound metallopeptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
D PADK2_24980 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D PADK2_03900 chaperone CupB2 K15540 ecpD; chaperone protein EcpD
D PADK2_03910 chaperone CupB4 K15540 ecpD; chaperone protein EcpD
C 99995 Signaling proteins
D PADK2_23535 hypothetical protein K03807 ampE; AmpE protein
D PADK2_12320 hypothetical protein K03607 proQ; ProP effector
D PADK2_09260 putative universal stress protein K06149 uspA; universal stress protein A
D PADK2_22555 putative universal stress protein K14055 uspE; universal stress protein E
D PADK2_27080 GTP-binding protein TypA K06207 typA; GTP-binding protein
D PADK2_16385 putative CBS-domain-containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D PADK2_04415 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PADK2_04730 PhoH family protein K07175 phoH2; PhoH-like ATPase
D PADK2_02965 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D PADK2_08160 hypothetical protein K07182 K07182; CBS domain-containing protein
D PADK2_26295 membrane protein K07186 smp; membrane protein
D PADK2_22905 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PADK2_11590 lolA; lipoprotein chaperone K03634 lolA; outer membrane lipoprotein carrier protein
D PADK2_24795 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D PADK2_08130 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PADK2_10415 lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PADK2_20415 17 kDa surface antigen K06077 slyB; outer membrane lipoprotein SlyB
D PADK2_06105 outer membrane chaperone Skp K06142 hlpA; outer membrane protein
D PADK2_26110 hypothetical protein K12943 ygeR; lipoprotein YgeR
D PADK2_03995 outer membrane protein W K07275 ompW; outer membrane protein
D PADK2_24650 putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D PADK2_27235 AsmA family protein K07289 asmA; AsmA protein
D PADK2_25885 hypothetical protein K07290 yhjG; AsmA family protein
D PADK2_27575 membrane protein implicated in regulation of membrane protease activity K07340 ybbJ; inner membrane protein
D PADK2_07260 hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D PADK2_27685 putative membrane fusion protein K01993 ABC-2.TX; HlyD family secretion protein
D PADK2_24385 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D PADK2_25870 DNA-binding transcriptional activator OsmE K04064 osmE; osmotically inducible lipoprotein OsmE
D PADK2_02335 inner membrane protein K06143 creD; inner membrane protein
D PADK2_18330 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PADK2_18310 cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PADK2_18315 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PADK2_05305 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
D PADK2_13060 hypothetical protein K21695 aaeX; protein AaeX
D PADK2_07760 hypothetical protein K21695 aaeX; protein AaeX
C 99994 Others
D PADK2_28560 phosphate uptake regulatory protein PhoU K02039 phoU; phosphate transport system protein
D PADK2_06715 putative bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D PADK2_26885 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein
D PADK2_12490 hypothetical protein K05794 terC; tellurite resistance protein TerC
D PADK2_07390 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D PADK2_02980 apaG; CO2+/MG2+ efflux protein ApaG K06195 apaG; ApaG protein
D PADK2_27910 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D PADK2_17340 hypothetical protein K07216 hr; hemerythrin
D PADK2_07305 NosD protein K07218 nosD; nitrous oxidase accessory protein
D PADK2_28700 hypothetical protein K07222 K07222; putative flavoprotein involved in K+ transport
D PADK2_25010 putative hemin degrading factor K07225 hmuS; putative hemin transport protein
D PADK2_22770 metalloproteinase outer membrane K07231 K07231; putative iron-regulated protein
D PADK2_11835 copper resistance protein B K07233 pcoB; copper resistance protein B
D PADK2_15325 copper resistance protein B precursor K07233 pcoB; copper resistance protein B
D PADK2_11340 putative membraine protein K07234 K07234; uncharacterized protein involved in response to NO
D PADK2_07290 NosL protein K19342 nosL; copper chaperone NosL
D PADK2_14970 putative metallothionein K21904 smtA; metallothionein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PADK2_06415 GlpM family protein K02442 glpM; membrane protein GlpM
D PADK2_08790 putative colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D PADK2_03100 putative lytic enzyme K03791 K03791; putative chitinase
D PADK2_24905 mce-related protein K06192 pqiB; paraquat-inducible protein B
D PADK2_00590 putative acyltransferase K02348 elaA; ElaA protein
D PADK2_02455 lipoprotein K05811 yfiM; putative lipoprotein
D PADK2_25165 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D PADK2_15725 hypothetical protein K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A
D PADK2_15720 pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D PADK2_15710 pyrroloquinoline quinone biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D PADK2_08220 tRNA-binding protein K06878 K06878; tRNA-binding protein
D PADK2_08120 hypothetical protein K07001 K07001; NTE family protein
D PADK2_07575 patatin-like protein, PlpD K07001 K07001; NTE family protein
D PADK2_17510 putative esterase K07001 K07001; NTE family protein
D PADK2_03250 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D PADK2_26300 inner membrane protein YbcI K07038 K07038; inner membrane protein
D PADK2_10720 hypothetical protein K07058 K07058; membrane protein
D PADK2_20940 ribonuclease K07058 K07058; membrane protein
D PADK2_22860 fxsA; phage T7 F exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA
D PADK2_06000 hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D PADK2_21415 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D PADK2_11525 putative lysogenization regulator K07153 hflD; high frequency lysogenization protein
D PADK2_24660 hypothetical protein K04750 phnB; PhnB protein
D PADK2_18870 hypothetical protein K04750 phnB; PhnB protein
D PADK2_28495 putative GlcG protein K11477 glcG; glc operon protein GlcG
D PADK2_13875 putative arsenical resistance protein K11811 arsH; arsenical resistance protein ArsH
D PADK2_28130 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D PADK2_02710 hypothetical protein K03744 lemA; LemA protein
D PADK2_22765 putative lemA-like protein K03744 lemA; LemA protein
D PADK2_20890 hypothetical protein K03745 slyX; SlyX protein
D PADK2_24250 hypothetical protein K05805 creA; CreA protein
D PADK2_19695 hypothetical protein K02742 sprT; SprT protein
D PADK2_08785 putative DedD protein K03749 dedD; DedD protein
D PADK2_26680 putative Type II secretory pathway protein K03112 damX; DamX protein
D PADK2_21445 chitin-binding protein CbpD precursor K03933 cpbD; chitin-binding protein
D PADK2_04180 SNARE associated Golgi protein-related protein K03975 dedA; membrane-associated protein
D PADK2_24910 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PADK2_24915 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PADK2_25625 putative membrane protein K08983 K08983; putative membrane protein
D PADK2_20360 putative lipoprotein K08985 K08985; putative lipoprotein
D PADK2_20475 putative membrane protein K08993 yhhL; putative membrane protein
D PADK2_15005 putative membrane protein K08995 K08995; putative membrane protein
D PADK2_20490 hypothetical protein K09858 K09858; SEC-C motif domain protein
D PADK2_05970 putative lipoprotein K09914 K09914; putative lipoprotein
D PADK2_00655 phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D PADK2_07860 putative ankyrin domain protein K06867 K06867; uncharacterized protein
D PADK2_12755 hypothetical protein K06867 K06867; uncharacterized protein
D PADK2_24495 ankyrin-like protein K06867 K06867; uncharacterized protein
D PADK2_02705 putative dehydrogenase K06872 K06872; uncharacterized protein
D PADK2_18470 hypothetical protein K06872 K06872; uncharacterized protein
D PADK2_18475 hypothetical protein K06872 K06872; uncharacterized protein
D PADK2_14710 hypothetical protein K06884 K06884; uncharacterized protein
D PADK2_14935 hypothetical protein K06884 K06884; uncharacterized protein
D PADK2_05865 putative hydrolase, alpha/beta family protein K06889 K06889; uncharacterized protein
D PADK2_05175 putative hydrolase K06889 K06889; uncharacterized protein
D PADK2_17305 hypothetical protein K06889 K06889; uncharacterized protein
D PADK2_14565 hypothetical protein K06889 K06889; uncharacterized protein
D PADK2_14825 hypothetical protein K06889 K06889; uncharacterized protein
D PADK2_16580 hypothetical protein K06893 K06893; uncharacterized protein
D PADK2_07610 putative isomerase K06893 K06893; uncharacterized protein
D PADK2_10260 hypothetical protein K06923 K06923; uncharacterized protein
D PADK2_05575 hypothetical protein K06938 K06938; uncharacterized protein
D PADK2_27905 hypothetical protein K06938 K06938; uncharacterized protein
D PADK2_16740 hypothetical protein K06938 K06938; uncharacterized protein
D PADK2_08350 putative Fe-S protein K06938 K06938; uncharacterized protein
D PADK2_06025 hypothetical protein K06940 K06940; uncharacterized protein
D PADK2_08280 putative ferredoxin K06940 K06940; uncharacterized protein
D PADK2_25565 hypothetical protein K06940 K06940; uncharacterized protein
D PADK2_17815 putative Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein
D PADK2_24155 hypothetical protein K06950 K06950; uncharacterized protein
D PADK2_16945 hypothetical protein K06975 K06975; uncharacterized protein
D PADK2_22470 hypothetical protein K06986 K06986; uncharacterized protein
D PADK2_21245 hypothetical protein K06987 K06987; uncharacterized protein
D PADK2_21595 ring-cleaving dioxygenase K06991 K06991; uncharacterized protein
D PADK2_15890 hypothetical protein K06992 K06992; uncharacterized protein
D PADK2_16875 putative peptidase K06992 K06992; uncharacterized protein
D PADK2_07135 hypothetical protein K06995 K06995; uncharacterized protein
D PADK2_13680 putative enzyme of the cupin superfamily protein K06995 K06995; uncharacterized protein
D PADK2_10650 hypothetical protein K06995 K06995; uncharacterized protein
D PADK2_16055 hypothetical protein K06995 K06995; uncharacterized protein
D PADK2_28305 hypothetical protein K06995 K06995; uncharacterized protein
D PADK2_17345 putative enzyme K06996 K06996; uncharacterized protein
D PADK2_26330 putative esterase K07000 K07000; uncharacterized protein
D PADK2_08940 putative export protein K07003 K07003; uncharacterized protein
D PADK2_04780 putative extracellular nuclease K07004 K07004; uncharacterized protein
D PADK2_09165 hypothetical protein K07006 K07006; uncharacterized protein
D PADK2_21085 hypothetical protein K07014 K07014; uncharacterized protein
D PADK2_23130 putative hydrolase K07018 K07018; uncharacterized protein
D PADK2_01850 putative hydrolase K07019 K07019; uncharacterized protein
D PADK2_17920 hypothetical protein K07020 K07020; uncharacterized protein
D PADK2_24970 hypothetical protein K07028 K07028; uncharacterized protein
D PADK2_23520 hypothetical protein K07032 K07032; uncharacterized protein
D PADK2_18525 hypothetical protein K07039 K07039; uncharacterized protein
D PADK2_07645 putative hydrolase K07044 K07044; uncharacterized protein
D PADK2_21560 hypothetical protein K07044 K07044; uncharacterized protein
D PADK2_18010 putative hydrolase K07044 K07044; uncharacterized protein
D PADK2_25050 putative zinc metallopeptidase K07054 K07054; uncharacterized protein
D PADK2_20620 hypothetical protein K07068 K07068; uncharacterized protein
D PADK2_00360 putative nucleic-acid-binding protein K07070 K07070; uncharacterized protein
D PADK2_24735 putative sugar nucleotide epimerase K07071 K07071; uncharacterized protein
D PADK2_24350 putative nucleotidyltransferase K07074 K07074; uncharacterized protein
D PADK2_14190 hypothetical protein K07075 K07075; uncharacterized protein
D PADK2_12355 putative nitroreductase K07078 K07078; uncharacterized protein
D PADK2_29465 putative periplasmic transport protein K07080 K07080; uncharacterized protein
D PADK2_05075 putative periplasmic transport protein K07080 K07080; uncharacterized protein
D PADK2_05455 hypothetical protein K07090 K07090; uncharacterized protein
D PADK2_01380 hypothetical protein K07090 K07090; uncharacterized protein
D PADK2_10140 putative permease K07090 K07090; uncharacterized protein
D PADK2_06975 putative transmembrane protein K07090 K07090; uncharacterized protein
D PADK2_01705 putative permease K07090 K07090; uncharacterized protein
D PADK2_26615 hypothetical protein K07090 K07090; uncharacterized protein
D PADK2_16545 putative membrain protein K07090 K07090; uncharacterized protein
D PADK2_21730 hypothetical protein K07090 K07090; uncharacterized protein
D PADK2_25450 putative peroxiredoxin K07092 K07092; uncharacterized protein
D PADK2_11485 hypothetical protein K07093 K07093; uncharacterized protein
D PADK2_01760 putative phosphoesterase K07095 K07095; uncharacterized protein
D PADK2_06185 putative inner membrane protein K07112 K07112; uncharacterized protein
D PADK2_28885 hypothetical protein K07112 K07112; uncharacterized protein
D PADK2_21995 hypothetical protein K07118 K07118; uncharacterized protein
D PADK2_21945 hypothetical protein K07120 K07120; uncharacterized protein
D PADK2_23045 hypothetical protein K07121 K07121; uncharacterized protein
D PADK2_03215 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D PADK2_25645 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D PADK2_01805 hypothetical protein K07126 K07126; uncharacterized protein
D PADK2_04430 hypothetical protein K07126 K07126; uncharacterized protein
D PADK2_23510 hypothetical protein K07126 K07126; uncharacterized protein
D PADK2_26935 hypothetical protein K07126 K07126; uncharacterized protein
D PADK2_26925 hypothetical protein K07126 K07126; uncharacterized protein
D PADK2_26930 hypothetical protein K07126 K07126; uncharacterized protein
D PADK2_09235 hypothetical protein K07140 K07140; MOSC domain-containing protein
D PADK2_04265 hypothetical protein K07157 K07157; uncharacterized protein
D PADK2_15425 hypothetical protein K08998 K08998; uncharacterized protein
D PADK2_02915 hypothetical protein K09117 K09117; uncharacterized protein
D PADK2_01970 hypothetical protein K09131 K09131; uncharacterized protein
D PADK2_04335 hypothetical protein K09158 K09158; uncharacterized protein
D PADK2_19145 hypothetical protein K09160 K09160; uncharacterized protein
D PADK2_10995 ATP/GTP-binding protein K09384 K09384; uncharacterized protein
D PADK2_27760 hypothetical protein K09768 K09768; uncharacterized protein
D PADK2_08315 YciI-like protein K09780 K09780; uncharacterized protein
D PADK2_16370 hypothetical protein K09781 K09781; uncharacterized protein
D PADK2_02960 hypothetical protein K09786 K09786; uncharacterized protein
D PADK2_18530 hypothetical protein K09790 K09790; uncharacterized protein
D PADK2_09455 hypothetical protein K09791 K09791; uncharacterized protein
D PADK2_17985 hypothetical protein K09792 K09792; uncharacterized protein
D PADK2_24490 hypothetical protein K09794 K09794; uncharacterized protein
D PADK2_27170 putative divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D PADK2_25300 protein rnfH K09801 K09801; uncharacterized protein
D PADK2_09390 hypothetical protein K05952 K05952; uncharacterized protein
D PADK2_20090 hypothetical protein K00243 K00243; uncharacterized protein
D PADK2_26305 hypothetical protein K09857 K09857; uncharacterized protein
D PADK2_06670 hypothetical protein K09861 K09861; uncharacterized protein
D PADK2_23600 DNA gyrase inhibitor K09862 K09862; uncharacterized protein
D PADK2_27645 hypothetical protein K09895 K09895; uncharacterized protein
D PADK2_06945 hypothetical protein K09898 K09898; uncharacterized protein
D PADK2_19165 hypothetical protein K09902 K09902; uncharacterized protein
D PADK2_23135 hypothetical protein K09908 K09908; uncharacterized protein
D PADK2_21015 hypothetical protein K09912 K09912; uncharacterized protein
D PADK2_06995 hypothetical protein K09915 K09915; uncharacterized protein
D PADK2_08910 hypothetical protein K09916 K09916; uncharacterized protein
D PADK2_07200 hypothetical protein K09918 K09918; uncharacterized protein
D PADK2_08175 hypothetical protein K09919 K09919; uncharacterized protein
D PADK2_26340 hypothetical protein K09920 K09920; uncharacterized protein
D PADK2_27930 hypothetical protein K09921 K09921; uncharacterized protein
D PADK2_17825 hypothetical protein K09922 K09922; uncharacterized protein
D PADK2_09115 hypothetical protein K09923 K09923; uncharacterized protein
D PADK2_16445 hypothetical protein K09923 K09923; uncharacterized protein
D PADK2_21425 hypothetical protein K09924 K09924; uncharacterized protein
D PADK2_18040 hypothetical protein K09925 K09925; uncharacterized protein
D PADK2_17970 hypothetical protein K09926 K09926; uncharacterized protein
D PADK2_10155 hypothetical protein K09927 K09927; uncharacterized protein
D PADK2_09430 hypothetical protein K09928 K09928; uncharacterized protein
D PADK2_07890 hypothetical protein K09929 K09929; uncharacterized protein
D PADK2_03795 hypothetical protein K09929 K09929; uncharacterized protein
D PADK2_07885 hypothetical protein K09930 K09930; uncharacterized protein
D PADK2_03790 hypothetical protein K09930 K09930; uncharacterized protein
D PADK2_07500 hypothetical protein K09931 K09931; uncharacterized protein
D PADK2_07085 hypothetical protein K09932 K09932; uncharacterized protein
D PADK2_23380 hypothetical protein K09934 K09934; uncharacterized protein
D PADK2_26190 putative transmembrane protein K09937 K09937; uncharacterized protein
D PADK2_20965 hypothetical protein K09938 K09938; uncharacterized protein
D PADK2_28400 hypothetical protein K09940 K09940; uncharacterized protein
D PADK2_04565 hypothetical protein K09945 K09945; uncharacterized protein
D PADK2_01645 hypothetical protein K09946 K09946; uncharacterized protein
D PADK2_22785 hypothetical protein K09947 K09947; uncharacterized protein
D PADK2_07065 hypothetical protein K09948 K09948; uncharacterized protein
D PADK2_04000 putative lipoprotein K09950 K09950; uncharacterized protein
D PADK2_28850 hypothetical protein K09950 K09950; uncharacterized protein
D PADK2_06280 hypothetical protein K09954 K09954; uncharacterized protein
D PADK2_03875 hypothetical protein K09956 K09956; uncharacterized protein
D PADK2_15680 hypothetical protein K09957 K09957; uncharacterized protein
D PADK2_28710 hypothetical protein K09958 K09958; uncharacterized protein
D PADK2_25365 hypothetical protein K09962 K09962; uncharacterized protein
D PADK2_22740 hypothetical protein K09964 K09964; uncharacterized protein
D PADK2_05510 hypothetical protein K09965 K09965; uncharacterized protein
D PADK2_27015 hypothetical protein K09975 K09975; uncharacterized protein
D PADK2_08890 hypothetical protein K09977 K09977; uncharacterized protein
D PADK2_28260 hypothetical protein K09978 K09978; uncharacterized protein
D PADK2_05680 hypothetical protein K09980 K09980; uncharacterized protein
D PADK2_22075 hypothetical protein K09982 K09982; uncharacterized protein
D PADK2_00295 hypothetical protein K09983 K09983; uncharacterized protein
D PADK2_16410 hypothetical protein K09984 K09984; uncharacterized protein
D PADK2_09585 hypothetical protein K09986 K09986; uncharacterized protein
D PADK2_11125 VWA containing CoxE family protein K09989 K09989; uncharacterized protein
D PADK2_27560 putative phosphate transport regulator K07220 K07220; uncharacterized protein
D PADK2_22780 putative lipoprotein K07338 K07338; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 28, 2024