+D GENES KO #

  KEGG Orthology (KO) - Prevotella denticola

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pdn00010] D HMPREF9137_1347 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HMPREF9137_1698 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF9137_1011 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HMPREF9137_2359 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D HMPREF9137_1030 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D HMPREF9137_0052 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF9137_1475 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF9137_2344 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HMPREF9137_0769 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HMPREF9137_1277 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF9137_0096 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HMPREF9137_2300 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF9137_1524 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D HMPREF9137_1430 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0543 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HMPREF9137_1431 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0542 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0471 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF9137_1652 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HMPREF9137_1884 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HMPREF9137_1999 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HMPREF9137_2455 putative glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D HMPREF9137_2410 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HMPREF9137_0477 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:pdn00020] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF9137_1430 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0543 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HMPREF9137_1431 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0542 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HMPREF9137_1432 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D HMPREF9137_1429 4Fe-4S binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D HMPREF9137_1090 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HMPREF9137_1091 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HMPREF9137_0600 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HMPREF9137_0601 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HMPREF9137_0599 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HMPREF9137_2215 hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D HMPREF9137_0880 lactate/malate dehydrogenase, NAD binding domain protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HMPREF9137_2105 HMGL-like protein K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D HMPREF9137_0477 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D HMPREF9137_1524 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:pdn00030] D HMPREF9137_1698 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF9137_0660 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D HMPREF9137_1184 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HMPREF9137_1888 Transketolase, thiamine diphosphate binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HMPREF9137_1889 putative ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HMPREF9137_0580 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D HMPREF9137_2410 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HMPREF9137_1230 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HMPREF9137_0052 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF9137_1030 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D HMPREF9137_1011 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HMPREF9137_2359 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:pdn00040] D HMPREF9137_1465 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HMPREF9137_1184 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:pdn00051] D HMPREF9137_1942 glycosyl hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D HMPREF9137_1950 glycosyl hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D HMPREF9137_0674 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HMPREF9137_0678 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HMPREF9137_2232 putative mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HMPREF9137_1513 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HMPREF9137_0385 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HMPREF9137_2196 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HMPREF9137_1290 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HMPREF9137_1289 NAD dependent epimerase/dehydratase family protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D HMPREF9137_1011 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HMPREF9137_2359 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D HMPREF9137_1030 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D HMPREF9137_0052 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF9137_0672 glycosyl hydrolase family 32 K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] D HMPREF9137_1889 putative ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:pdn00052] D HMPREF9137_1652 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HMPREF9137_1884 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HMPREF9137_1999 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HMPREF9137_1886 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HMPREF9137_2369 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HMPREF9137_2410 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HMPREF9137_1347 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HMPREF9137_1735 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_2183 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_0566 glycosyl hydrolase family 2, sugar binding domain protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_0438 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D HMPREF9137_1011 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HMPREF9137_0665 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D HMPREF9137_0671 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D HMPREF9137_0994 GDSL-like protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism D HMPREF9137_1465 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:pdn00500] D HMPREF9137_0665 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D HMPREF9137_0671 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D HMPREF9137_0994 GDSL-like protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D HMPREF9137_1998 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D HMPREF9137_0335 cellulase (glycosyl hydrolase family 5) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D HMPREF9137_2406 starch synthase catalytic domain protein K00703 glgA; starch synthase [EC:2.4.1.21] D HMPREF9137_1479 glycosyltransferase, group 1 family protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D HMPREF9137_1315 alpha amylase, catalytic domain protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D HMPREF9137_0463 glgP; alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D HMPREF9137_0724 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D HMPREF9137_0735 alpha amylase, catalytic domain protein K01176 AMY; alpha-amylase [EC:3.2.1.1] D HMPREF9137_0727 alpha amylase, catalytic domain protein K01176 AMY; alpha-amylase [EC:3.2.1.1] D HMPREF9137_1481 glycosyl hydrolase, family 57 K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1] D HMPREF9137_0421 alpha amylase, catalytic domain protein K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D HMPREF9137_1000 alpha amylase, catalytic domain protein K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D HMPREF9137_0675 hypothetical protein K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3] D HMPREF9137_0726 putative 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D HMPREF9137_0991 alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D HMPREF9137_2410 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HMPREF9137_1347 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HMPREF9137_1698 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF9137_0674 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HMPREF9137_0678 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pdn00520] D HMPREF9137_0207 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HMPREF9137_2292 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HMPREF9137_1921 glucosamine-6-phosphate deaminase-like protein K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D HMPREF9137_1922 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D HMPREF9137_0674 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HMPREF9137_0678 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HMPREF9137_1359 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HMPREF9137_1451 nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D HMPREF9137_0833 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HMPREF9137_0187 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HMPREF9137_1366 N-acylglucosamine 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8] D HMPREF9137_2434 dihydrodipicolinate synthetase family K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D HMPREF9137_1145 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D HMPREF9137_0806 NAD dependent epimerase/dehydratase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D HMPREF9137_1347 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HMPREF9137_2410 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HMPREF9137_1465 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HMPREF9137_1886 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HMPREF9137_2369 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HMPREF9137_1698 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF9137_2232 putative mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HMPREF9137_1513 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HMPREF9137_0385 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HMPREF9137_2196 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HMPREF9137_1290 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HMPREF9137_1289 NAD dependent epimerase/dehydratase family protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00620 Pyruvate metabolism [PATH:pdn00620] D HMPREF9137_0471 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF9137_1524 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D HMPREF9137_1430 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0543 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HMPREF9137_1431 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0542 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF9137_1860 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D HMPREF9137_0319 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HMPREF9137_0318 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF9137_0096 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HMPREF9137_1541 pdxB; 4-phosphoerythronate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D HMPREF9137_2267 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D HMPREF9137_2380 metallo-beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HMPREF9137_0167 malate dehydrogenase (oxaloacetate-decarboxylating) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D HMPREF9137_2105 HMGL-like protein K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D HMPREF9137_0880 lactate/malate dehydrogenase, NAD binding domain protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HMPREF9137_2215 hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D HMPREF9137_0477 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D HMPREF9137_2300 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pdn00630] D HMPREF9137_0471 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF9137_0880 lactate/malate dehydrogenase, NAD binding domain protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HMPREF9137_1962 pdxB; 4-phosphoerythronate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D HMPREF9137_0101 HAD hydrolase, family IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HMPREF9137_1930 HAD hydrolase, family IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HMPREF9137_0797 glnA; glutamate--ammonia ligase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1467 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1533 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HMPREF9137_2191 glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HMPREF9137_2190 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HMPREF9137_2193 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF9137_2192 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D HMPREF9137_1197 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] C 00640 Propanoate metabolism [PATH:pdn00640] D HMPREF9137_0471 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF9137_0319 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HMPREF9137_0318 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF9137_1860 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D HMPREF9137_1091 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HMPREF9137_1090 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:pdn00650] D HMPREF9137_1092 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D HMPREF9137_2367 Biotin-requiring enzyme K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D HMPREF9137_0600 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HMPREF9137_0601 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HMPREF9137_0599 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HMPREF9137_1860 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D HMPREF9137_1524 nifJ; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D HMPREF9137_1430 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0543 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HMPREF9137_1431 thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0542 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HMPREF9137_0305 aDH; NADP-dependent alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80] C 00660 C5-Branched dibasic acid metabolism D HMPREF9137_1091 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HMPREF9137_1090 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:pdn00562] D HMPREF9137_1224 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HMPREF9137_0850 oxidoreductase, NAD-binding domain protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pdn00190] D HMPREF9137_1114 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HMPREF9137_1115 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D HMPREF9137_1116 respiratory-chain NADH dehydrogenase, 49 Kd subunit K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D HMPREF9137_1117 NADH dehydrogenase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HMPREF9137_1118 4Fe-4S binding domain protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D HMPREF9137_1119 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D HMPREF9137_1120 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HMPREF9137_1122 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D HMPREF9137_1123 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D HMPREF9137_0680 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D HMPREF9137_0600 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HMPREF9137_0601 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HMPREF9137_0599 sdhC; succinate dehydrogenase cytochrome B subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HMPREF9137_1160 bacterial cytochrome ubiquinol oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HMPREF9137_1161 putative cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HMPREF9137_1019 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HMPREF9137_1012 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HMPREF9137_1020 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HMPREF9137_1018 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HMPREF9137_1013 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HMPREF9137_1015 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HMPREF9137_1017 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HMPREF9137_1016 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:pdn00680] D HMPREF9137_1533 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HMPREF9137_1962 pdxB; 4-phosphoerythronate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D HMPREF9137_1277 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF9137_0880 lactate/malate dehydrogenase, NAD binding domain protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HMPREF9137_0052 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF9137_1030 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D HMPREF9137_1011 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HMPREF9137_0319 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HMPREF9137_0318 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF9137_0471 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF9137_0769 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HMPREF9137_2469 pdxB; 4-phosphoerythronate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HMPREF9137_2470 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:pdn00910] D HMPREF9137_1264 nrfA; nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D HMPREF9137_1265 nrfH; cytochrome c nitrate reductase, small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit D HMPREF9137_0507 Cytochrome C oxidase subunit II, periplasmic domain protein K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D HMPREF9137_1292 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D HMPREF9137_1402 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HMPREF9137_2199 gdh; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HMPREF9137_0797 glnA; glutamate--ammonia ligase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1467 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_0111 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:pdn00920] D HMPREF9137_1071 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D HMPREF9137_0365 phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D HMPREF9137_1236 putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HMPREF9137_0236 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HMPREF9137_1502 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pdn00061] D HMPREF9137_0495 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF9137_2060 putative acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF9137_2065 putative acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF9137_1911 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HMPREF9137_0274 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HMPREF9137_1626 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HMPREF9137_2056 Beta-ketoacyl synthase, N-terminal domain protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D HMPREF9137_2064 Beta-ketoacyl synthase, C-terminal domain protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D HMPREF9137_0496 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF9137_2066 Beta-ketoacyl synthase, C-terminal domain protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF9137_0173 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF9137_2055 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF9137_0004 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D HMPREF9137_0362 hypothetical protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HMPREF9137_0351 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1306 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1307 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D HMPREF9137_0351 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1306 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1307 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pdn00561] D HMPREF9137_1197 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D HMPREF9137_0393 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D HMPREF9137_1552 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HMPREF9137_0438 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:pdn00564] D HMPREF9137_1699 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HMPREF9137_0396 glpA; glycerol-3-phosphate dehydrogenase, anaerobic, A subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D HMPREF9137_0395 glpB; glycerol-3-phosphate dehydrogenase, anaerobic, B subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D HMPREF9137_0394 glpC; glycerol-3-phosphate dehydrogenase, anaerobic, C subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D HMPREF9137_1552 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HMPREF9137_1716 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D HMPREF9137_2123 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D HMPREF9137_2124 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D HMPREF9137_1183 phospholipase D domain protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D HMPREF9137_1768 phospholipase D domain protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:pdn00600] D HMPREF9137_1735 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_2183 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_0566 glycosyl hydrolase family 2, sugar binding domain protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_1920 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] D HMPREF9137_0438 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D HMPREF9137_0207 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HMPREF9137_2292 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pdn00230] D HMPREF9137_1496 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D HMPREF9137_2410 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HMPREF9137_1230 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HMPREF9137_1360 class II glutamine amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HMPREF9137_1239 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HMPREF9137_1299 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D HMPREF9137_0839 putative phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D HMPREF9137_2337 hypothetical protein K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D HMPREF9137_0512 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D HMPREF9137_0104 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HMPREF9137_0243 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HMPREF9137_0045 AICARFT/IMPCHase bienzyme K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HMPREF9137_0585 putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HMPREF9137_0037 Ser/Thr phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HMPREF9137_1749 survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HMPREF9137_1194 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D HMPREF9137_0047 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HMPREF9137_0050 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D HMPREF9137_0247 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HMPREF9137_0575 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D HMPREF9137_1046 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D HMPREF9137_1452 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HMPREF9137_0216 cytidine and deoxycytidylate deaminase zinc-binding region K01487 guaD; guanine deaminase [EC:3.5.4.3] D HMPREF9137_0829 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D HMPREF9137_2495 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF9137_0548 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF9137_0547 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HMPREF9137_1364 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HMPREF9137_0356 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D HMPREF9137_2374 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HMPREF9137_1744 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HMPREF9137_0348 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D HMPREF9137_1169 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HMPREF9137_1215 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D HMPREF9137_1216 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D HMPREF9137_1400 5'-nucleotidase, C-terminal domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D HMPREF9137_0049 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:pdn00240] D HMPREF9137_1362 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HMPREF9137_1361 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HMPREF9137_2308 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HMPREF9137_2306 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D HMPREF9137_1555 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D HMPREF9137_1457 dihydroorotate dehydrogenase 1B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D HMPREF9137_1456 oxidoreductase NAD-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D HMPREF9137_0292 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D HMPREF9137_2334 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HMPREF9137_0220 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D HMPREF9137_2342 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D HMPREF9137_1906 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D HMPREF9137_2035 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D HMPREF9137_0565 phosphoribulokinase/uridine kinase family protein K00876 udk; uridine kinase [EC:2.7.1.48] D HMPREF9137_1827 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D HMPREF9137_0037 Ser/Thr phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HMPREF9137_1749 survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HMPREF9137_1223 HAD hydrolase, family IA, variant 3 K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D HMPREF9137_1328 phosphorylase family K00757 udp; uridine phosphorylase [EC:2.4.2.3] D HMPREF9137_0478 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D HMPREF9137_1400 5'-nucleotidase, C-terminal domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D HMPREF9137_0551 putative cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D HMPREF9137_1364 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HMPREF9137_2495 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF9137_0548 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF9137_0547 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HMPREF9137_1215 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D HMPREF9137_1216 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D HMPREF9137_1246 cytidine and deoxycytidylate deaminase zinc-binding region K01493 comEB; dCMP deaminase [EC:3.5.4.12] D HMPREF9137_0355 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HMPREF9137_2237 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D HMPREF9137_1204 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HMPREF9137_2241 putative thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HMPREF9137_1273 oxidoreductase, short chain dehydrogenase/reductase family protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pdn00250] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_0204 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HMPREF9137_2433 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HMPREF9137_1566 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D HMPREF9137_0739 putative aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D HMPREF9137_1169 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HMPREF9137_0243 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HMPREF9137_2308 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HMPREF9137_2306 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D HMPREF9137_0111 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D HMPREF9137_1402 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HMPREF9137_2199 gdh; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HMPREF9137_0797 glnA; glutamate--ammonia ligase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1467 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1362 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HMPREF9137_1361 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HMPREF9137_1359 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HMPREF9137_1360 class II glutamine amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pdn00260] D HMPREF9137_1034 amino acid kinase family K00928 lysC; aspartate kinase [EC:2.7.2.4] D HMPREF9137_2449 homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D HMPREF9137_0256 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HMPREF9137_1533 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HMPREF9137_1962 pdxB; 4-phosphoerythronate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D HMPREF9137_1197 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D HMPREF9137_0769 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HMPREF9137_2469 pdxB; 4-phosphoerythronate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HMPREF9137_2470 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D HMPREF9137_1273 oxidoreductase, short chain dehydrogenase/reductase family protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D HMPREF9137_0843 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D HMPREF9137_2191 glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HMPREF9137_2190 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HMPREF9137_2193 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF9137_2192 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D HMPREF9137_2123 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D HMPREF9137_1128 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HMPREF9137_0194 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:pdn00270] D HMPREF9137_1236 putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HMPREF9137_0236 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HMPREF9137_0431 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HMPREF9137_2054 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D HMPREF9137_0047 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HMPREF9137_1694 putative GAF domain-containing protein A K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D HMPREF9137_2053 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HMPREF9137_1034 amino acid kinase family K00928 lysC; aspartate kinase [EC:2.7.2.4] D HMPREF9137_2449 homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D HMPREF9137_0256 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HMPREF9137_1502 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D HMPREF9137_0235 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D HMPREF9137_1664 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_0880 lactate/malate dehydrogenase, NAD binding domain protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HMPREF9137_1128 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HMPREF9137_2469 pdxB; 4-phosphoerythronate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HMPREF9137_2470 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pdn00280] D HMPREF9137_1664 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pdn00290] D HMPREF9137_1664 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:pdn00300] D HMPREF9137_1034 amino acid kinase family K00928 lysC; aspartate kinase [EC:2.7.2.4] D HMPREF9137_2449 homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D HMPREF9137_0256 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HMPREF9137_2332 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HMPREF9137_0605 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HMPREF9137_1470 aminotransferase, class I/II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D HMPREF9137_1033 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HMPREF9137_1783 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D HMPREF9137_1758 LYS1; saccharopine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7] D HMPREF9137_0790 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HMPREF9137_0414 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HMPREF9137_2283 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] C 00310 Lysine degradation [PATH:pdn00310] D HMPREF9137_1758 LYS1; saccharopine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:pdn00220] D HMPREF9137_0797 glnA; glutamate--ammonia ligase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1467 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1402 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HMPREF9137_2199 gdh; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:pdn00330] D HMPREF9137_0612 speA; arginine 2-monooxygenase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D HMPREF9137_1567 putative N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D HMPREF9137_1228 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D HMPREF9137_0965 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:pdn00340] D HMPREF9137_2315 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HMPREF9137_1321 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D HMPREF9137_1322 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D HMPREF9137_1320 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D HMPREF9137_1323 ftcD; glutamate formimidoyltransferase K13990 FTCD; glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] C 00350 Tyrosine metabolism [PATH:pdn00350] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_2315 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:pdn00360] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_2315 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pdn00400] D HMPREF9137_2107 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D HMPREF9137_0442 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D HMPREF9137_0611 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D HMPREF9137_0069 putative 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D HMPREF9137_1459 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D HMPREF9137_1188 glutamine amidotransferase, class I K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HMPREF9137_1187 putative N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D HMPREF9137_0194 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D HMPREF9137_1471 putative 3-deoxy-7-phosphoheptulonate synthase K04516 AROA1; chorismate mutase [EC:5.4.99.5] D HMPREF9137_1469 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_2315 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pdn00410] D HMPREF9137_2404 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D HMPREF9137_2405 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:pdn00430] D HMPREF9137_0318 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF9137_0319 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D HMPREF9137_0186 metallo-beta-lactamase domain protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:pdn00450] D HMPREF9137_0741 sufS; cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D HMPREF9137_1214 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HMPREF9137_0343 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pdn00460] D HMPREF9137_1998 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D HMPREF9137_2433 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HMPREF9137_1566 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D HMPREF9137_1533 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pdn00470] D HMPREF9137_2283 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D HMPREF9137_0399 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HMPREF9137_0554 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HMPREF9137_0788 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HMPREF9137_1033 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:pdn00480] D HMPREF9137_0071 pepD; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D HMPREF9137_1691 pepD; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D HMPREF9137_0089 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D HMPREF9137_1124 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:pdn00511] D HMPREF9137_1920 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] D HMPREF9137_1735 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_2183 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_0566 glycosyl hydrolase family 2, sugar binding domain protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HMPREF9137_0207 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HMPREF9137_2292 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HMPREF9137_0993 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D HMPREF9137_1909 hypothetical protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D HMPREF9137_1792 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D HMPREF9137_1029 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis [PATH:pdn00540] D HMPREF9137_0005 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D HMPREF9137_0004 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D HMPREF9137_0003 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D HMPREF9137_0320 Ser/Thr phosphatase family protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D HMPREF9137_1750 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D HMPREF9137_1195 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D HMPREF9137_1182 sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HMPREF9137_1181 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D HMPREF9137_2341 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D HMPREF9137_2340 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D HMPREF9137_0872 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D HMPREF9137_0534 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D HMPREF9137_0823 arylsulfatase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D HMPREF9137_0720 arylsulfatase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] C 00542 O-Antigen repeat unit biosynthesis [PATH:pdn00542] D HMPREF9137_0033 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pdn00541] D HMPREF9137_2369 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HMPREF9137_1465 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HMPREF9137_1100 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HMPREF9137_1300 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HMPREF9137_2174 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HMPREF9137_1344 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HMPREF9137_2232 putative mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HMPREF9137_1513 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HMPREF9137_0385 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HMPREF9137_2196 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HMPREF9137_1290 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HMPREF9137_1289 NAD dependent epimerase/dehydratase family protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D HMPREF9137_1145 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:pdn00550] D HMPREF9137_0833 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HMPREF9137_0187 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HMPREF9137_0785 putative UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HMPREF9137_0788 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HMPREF9137_0790 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HMPREF9137_0399 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HMPREF9137_0414 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HMPREF9137_2283 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D HMPREF9137_0559 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HMPREF9137_1085 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HMPREF9137_1253 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HMPREF9137_0789 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HMPREF9137_0786 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HMPREF9137_2482 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D HMPREF9137_0007 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HMPREF9137_2310 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HMPREF9137_1233 penicillin-binding protein, transpeptidase domain protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HMPREF9137_2097 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HMPREF9137_0791 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HMPREF9137_1781 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:pdn00552] D HMPREF9137_1085 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HMPREF9137_1253 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HMPREF9137_0033 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D HMPREF9137_2430 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D HMPREF9137_2421 LICD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] D HMPREF9137_0805 LICD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] D HMPREF9137_0029 hypothetical protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pdn00543] D HMPREF9137_0033 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D HMPREF9137_1052 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D HMPREF9137_0163 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D HMPREF9137_1236 putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pdn00730] D HMPREF9137_0302 putative phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D HMPREF9137_0229 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HMPREF9137_1739 putative 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HMPREF9137_1229 hypothetical protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HMPREF9137_1193 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D HMPREF9137_1696 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HMPREF9137_2295 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D HMPREF9137_0049 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pdn00740] D HMPREF9137_1881 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HMPREF9137_0333 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HMPREF9137_0133 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D HMPREF9137_2187 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D HMPREF9137_2050 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D HMPREF9137_0039 PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D HMPREF9137_2453 PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D HMPREF9137_1496 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:pdn00750] D HMPREF9137_0429 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D HMPREF9137_2470 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D HMPREF9137_1510 pdxA; pyridoxal phosphate biosynthetic protein PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D HMPREF9137_0303 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D HMPREF9137_0304 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:pdn00760] D HMPREF9137_0204 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HMPREF9137_0205 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D HMPREF9137_0206 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D HMPREF9137_1538 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D HMPREF9137_1194 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D HMPREF9137_0037 Ser/Thr phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HMPREF9137_1749 survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HMPREF9137_0828 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HMPREF9137_1399 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D HMPREF9137_1250 nadE; NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D HMPREF9137_2324 competence/damage-inducible domain protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D HMPREF9137_1458 hypothetical protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D HMPREF9137_0649 transcriptional regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D HMPREF9137_0712 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:pdn00770] D HMPREF9137_2376 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D HMPREF9137_2405 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HMPREF9137_0196 putative pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33] D HMPREF9137_1269 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D HMPREF9137_0633 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HMPREF9137_1682 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D HMPREF9137_1418 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D HMPREF9137_1664 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HMPREF9137_2404 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:pdn00780] D HMPREF9137_2056 Beta-ketoacyl synthase, N-terminal domain protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D HMPREF9137_2064 Beta-ketoacyl synthase, C-terminal domain protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D HMPREF9137_0496 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF9137_2066 Beta-ketoacyl synthase, C-terminal domain protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF9137_0173 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF9137_2055 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF9137_0362 hypothetical protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HMPREF9137_1409 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D HMPREF9137_0219 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pdn00785] D HMPREF9137_0254 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF9137_2191 glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HMPREF9137_2190 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HMPREF9137_2193 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HMPREF9137_2192 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pdn00790] D HMPREF9137_1057 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D HMPREF9137_2496 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D HMPREF9137_1393 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D HMPREF9137_1082 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D HMPREF9137_0315 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HMPREF9137_1203 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HMPREF9137_1865 folC; bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HMPREF9137_1881 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HMPREF9137_0481 para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D HMPREF9137_0482 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D HMPREF9137_0109 protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HMPREF9137_1651 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:pdn00670] D HMPREF9137_1203 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HMPREF9137_1279 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D HMPREF9137_1427 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HMPREF9137_1533 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HMPREF9137_0045 AICARFT/IMPCHase bienzyme K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HMPREF9137_1323 ftcD; glutamate formimidoyltransferase K13990 FTCD; glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] D HMPREF9137_1489 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HMPREF9137_2193 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HMPREF9137_1204 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HMPREF9137_2241 putative thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HMPREF9137_1248 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pdn00860] D HMPREF9137_0871 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF9137_0433 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pdn00130] D HMPREF9137_0103 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D HMPREF9137_1702 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D HMPREF9137_1703 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D HMPREF9137_1707 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D HMPREF9137_1704 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D HMPREF9137_0214 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pdn00900] D HMPREF9137_0229 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HMPREF9137_1739 putative 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HMPREF9137_0835 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D HMPREF9137_0710 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D HMPREF9137_2478 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D HMPREF9137_0681 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D HMPREF9137_0511 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HMPREF9137_1338 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D HMPREF9137_2101 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HMPREF9137_0579 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HMPREF9137_0559 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HMPREF9137_1888 Transketolase, thiamine diphosphate binding domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pdn00523] D HMPREF9137_1100 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HMPREF9137_1300 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HMPREF9137_2174 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HMPREF9137_1344 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D HMPREF9137_1702 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D HMPREF9137_1300 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:pdn00946] D HMPREF9137_1998 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:pdn00261] D HMPREF9137_1034 amino acid kinase family K00928 lysC; aspartate kinase [EC:2.7.2.4] D HMPREF9137_2449 homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D HMPREF9137_0256 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HMPREF9137_2332 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HMPREF9137_0605 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pdn00521] D HMPREF9137_1347 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HMPREF9137_2410 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HMPREF9137_1224 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HMPREF9137_1100 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HMPREF9137_1300 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HMPREF9137_2174 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HMPREF9137_1344 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D HMPREF9137_1347 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:pdn00525] D HMPREF9137_1100 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HMPREF9137_1300 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:pdn00401] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_2315 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D HMPREF9137_1188 glutamine amidotransferase, class I K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D HMPREF9137_1911 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HMPREF9137_0173 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF9137_2055 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF9137_0362 hypothetical protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D HMPREF9137_0495 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF9137_2060 putative acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF9137_2065 putative acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:pdn00999] D HMPREF9137_0431 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HMPREF9137_1998 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D HMPREF9137_2367 Biotin-requiring enzyme K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pdn03020] D HMPREF9137_0902 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HMPREF9137_0903 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HMPREF9137_0370 hypothetical protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HMPREF9137_0946 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pdn03010] D HMPREF9137_2017 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HMPREF9137_0699 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HMPREF9137_0925 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HMPREF9137_0945 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HMPREF9137_0936 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HMPREF9137_1918 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HMPREF9137_0916 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HMPREF9137_0933 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HMPREF9137_0698 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HMPREF9137_0918 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HMPREF9137_0944 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HMPREF9137_0915 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HMPREF9137_0943 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HMPREF9137_0932 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14 D HMPREF9137_1080 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HMPREF9137_1319 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HMPREF9137_0928 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HMPREF9137_1917 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HMPREF9137_0923 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HMPREF9137_0777 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HMPREF9137_0887 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HMPREF9137_0899 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HMPREF9137_0922 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HMPREF9137_0919 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HMPREF9137_0920 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HMPREF9137_0931 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HMPREF9137_0934 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HMPREF9137_0901 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HMPREF9137_1916 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HMPREF9137_0900 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HMPREF9137_0898 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HMPREF9137_0697 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HMPREF9137_0929 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HMPREF9137_0938 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HMPREF9137_0926 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HMPREF9137_0947 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HMPREF9137_0935 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HMPREF9137_0040 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HMPREF9137_1171 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HMPREF9137_1498 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HMPREF9137_0924 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HMPREF9137_0921 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HMPREF9137_0930 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HMPREF9137_1686 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D HMPREF9137_1499 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HMPREF9137_2325 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HMPREF9137_0927 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HMPREF9137_0937 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HMPREF9137_1834 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HMPREF9137_2326 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HMPREF9137_0402 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HMPREF9137_1172 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HMPREF9137_0942 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HMPREF9137_2117 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0470 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0853 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0283 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0280 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_2120 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_0854 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_0469 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_0279 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_2121 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_0855 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_0468 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pdn00970] D HMPREF9137_0281 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF9137_2119 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF9137_0312 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF9137_1960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF9137_1348 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF9137_1564 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF9137_0749 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HMPREF9137_0966 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HMPREF9137_0967 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HMPREF9137_1167 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HMPREF9137_0439 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HMPREF9137_1713 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HMPREF9137_0778 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF9137_0076 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF9137_0077 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF9137_1411 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF9137_1414 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF9137_1374 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF9137_0892 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF9137_1504 tRNA-His K14226 tRNA-His; tRNA His D HMPREF9137_0282 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HMPREF9137_2118 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HMPREF9137_1412 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_0446 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_1788 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_1413 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_0384 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_2346 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF9137_1668 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF9137_1669 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF9137_1876 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF9137_1929 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF9137_2051 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF9137_1192 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HMPREF9137_1410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF9137_0415 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF9137_0070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF9137_0075 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF9137_2466 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF9137_2127 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF9137_0989 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF9137_2347 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF9137_0890 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF9137_1373 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF9137_0893 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF9137_0895 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HMPREF9137_0891 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HMPREF9137_1396 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HMPREF9137_0241 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF9137_1397 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF9137_0242 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF9137_0871 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF9137_2488 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D HMPREF9137_1764 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HMPREF9137_2413 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HMPREF9137_0245 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D HMPREF9137_0223 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HMPREF9137_2402 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HMPREF9137_0112 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HMPREF9137_0501 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HMPREF9137_0343 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HMPREF9137_1489 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HMPREF9137_2444 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HMPREF9137_0577 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HMPREF9137_2459 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HMPREF9137_1700 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF9137_0341 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HMPREF9137_1026 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HMPREF9137_1170 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HMPREF9137_0190 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HMPREF9137_2304 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HMPREF9137_0436 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HMPREF9137_0874 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pdn03060] D HMPREF9137_0939 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D HMPREF9137_0896 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HMPREF9137_1505 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HMPREF9137_0408 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D HMPREF9137_1684 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HMPREF9137_1905 yidC; membrane protein insertase, YidC/Oxa1 family domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HMPREF9137_0182 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HMPREF9137_1426 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HMPREF9137_2348 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D HMPREF9137_1353 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HMPREF9137_0606 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HMPREF9137_2461 putative signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system C 03050 Proteasome C 03018 RNA degradation [PATH:pdn03018] D HMPREF9137_1277 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF9137_0650 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HMPREF9137_0541 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HMPREF9137_0656 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HMPREF9137_0262 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF9137_1436 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF9137_2372 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D HMPREF9137_1105 YmdA/YtgF family protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D HMPREF9137_1011 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HMPREF9137_1820 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF9137_1342 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF9137_1061 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pdn03030] D HMPREF9137_1270 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_1673 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_2125 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF9137_1559 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF9137_2224 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF9137_1543 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF9137_1271 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF9137_2477 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HMPREF9137_1770 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HMPREF9137_1416 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF9137_0340 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HMPREF9137_0740 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HMPREF9137_0578 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D HMPREF9137_1136 ligA; NAD-dependent DNA ligase OB-fold domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pdn03410] D HMPREF9137_2442 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HMPREF9137_0772 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HMPREF9137_0773 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HMPREF9137_2091 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HMPREF9137_1054 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HMPREF9137_0578 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D HMPREF9137_1437 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HMPREF9137_1136 ligA; NAD-dependent DNA ligase OB-fold domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pdn03420] D HMPREF9137_1705 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HMPREF9137_1068 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D HMPREF9137_1078 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D HMPREF9137_0057 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D HMPREF9137_0584 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D HMPREF9137_0059 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF9137_2481 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF9137_0578 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D HMPREF9137_1136 ligA; NAD-dependent DNA ligase OB-fold domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pdn03430] D HMPREF9137_0490 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D HMPREF9137_1207 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D HMPREF9137_0252 mutL; DNA mismatch repair domain protein K03572 mutL; DNA mismatch repair protein MutL D HMPREF9137_0059 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF9137_2481 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF9137_1666 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HMPREF9137_1665 putative exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HMPREF9137_1437 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HMPREF9137_1416 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF9137_2125 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF9137_1271 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF9137_1559 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF9137_1543 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF9137_2224 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF9137_1270 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_1673 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_1136 ligA; NAD-dependent DNA ligase OB-fold domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HMPREF9137_0950 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:pdn03440] D HMPREF9137_1437 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HMPREF9137_1416 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF9137_0131 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D HMPREF9137_0779 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HMPREF9137_0962 recR; recombination protein RecR K06187 recR; recombination protein RecR D HMPREF9137_1757 recA; RecA protein K03553 recA; recombination protein RecA D HMPREF9137_0578 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D HMPREF9137_1785 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HMPREF9137_0639 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HMPREF9137_2381 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HMPREF9137_0371 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF9137_1656 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF9137_0708 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF9137_2125 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF9137_1271 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF9137_1559 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF9137_1543 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF9137_2224 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF9137_1270 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_1673 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_0868 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pdn02010] D HMPREF9137_2498 putative virulence factor Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HMPREF9137_0267 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HMPREF9137_0268 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HMPREF9137_0445 efflux ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D HMPREF9137_0456 efflux ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D HMPREF9137_2311 efflux ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D HMPREF9137_0258 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D HMPREF9137_1880 permease, YjgP/YjgQ family K07091 lptF; lipopolysaccharide export system permease protein D HMPREF9137_1404 permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein D HMPREF9137_0266 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HMPREF9137_0502 hypothetical protein K19341 nosY; Cu-processing system permease protein D HMPREF9137_0503 ABC transporter, ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D HMPREF9137_1087 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein D HMPREF9137_1035 ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D HMPREF9137_1614 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HMPREF9137_1613 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HMPREF9137_0532 ABC transporter, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:pdn03070] D HMPREF9137_0408 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D HMPREF9137_0896 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HMPREF9137_1505 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HMPREF9137_0939 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D HMPREF9137_1684 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HMPREF9137_1905 yidC; membrane protein insertase, YidC/Oxa1 family domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HMPREF9137_0182 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HMPREF9137_1353 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HMPREF9137_1426 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:pdn02020] D HMPREF9137_0202 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HMPREF9137_0039 PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D HMPREF9137_2453 PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D HMPREF9137_1111 peptidase Do K04771 degP; serine protease Do [EC:3.4.21.107] D HMPREF9137_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HMPREF9137_0631 ddpX; D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D HMPREF9137_0797 glnA; glutamate--ammonia ligase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1467 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_0514 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D HMPREF9137_1160 bacterial cytochrome ubiquinol oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HMPREF9137_1161 putative cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HMPREF9137_1358 polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein D HMPREF9137_1099 putative phage head-tail adaptor K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D HMPREF9137_1145 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D HMPREF9137_0335 cellulase (glycosyl hydrolase family 5) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D HMPREF9137_2181 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D HMPREF9137_0999 sigma factor regulatory protein, FecR/PupR family K07165 fecR; transmembrane sensor D HMPREF9137_2182 sigma factor regulatory protein, FecR/PupR family K07165 fecR; transmembrane sensor C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pdn02024] D HMPREF9137_2053 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HMPREF9137_1188 glutamine amidotransferase, class I K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HMPREF9137_0351 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1306 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1307 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1942 glycosyl hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D HMPREF9137_1950 glycosyl hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D HMPREF9137_0333 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HMPREF9137_1064 efflux transporter, outer membrane factor lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HMPREF9137_1926 efflux transporter, outer membrane factor lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HMPREF9137_1905 yidC; membrane protein insertase, YidC/Oxa1 family domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HMPREF9137_0969 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF9137_2228 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF9137_0408 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D HMPREF9137_0896 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HMPREF9137_1505 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HMPREF9137_0939 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D HMPREF9137_1684 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HMPREF9137_0182 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HMPREF9137_1353 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HMPREF9137_1426 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D HMPREF9137_0285 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:pdn02040] D HMPREF9137_0285 OmpA family protein K02557 motB; chemotaxis protein MotB D HMPREF9137_2485 sigma-70, region 4 K03086 rpoD; RNA polymerase primary sigma factor D HMPREF9137_1024 Sigma-70 region 2 K03086 rpoD; RNA polymerase primary sigma factor D HMPREF9137_1110 Sigma-70 region 2 K03086 rpoD; RNA polymerase primary sigma factor D HMPREF9137_0514 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D HMPREF9137_1277 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pdn01501] D HMPREF9137_1139 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HMPREF9137_1923 transporter, major facilitator family protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HMPREF9137_2089 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HMPREF9137_1762 peptidase, M56 family K02172 blaR1; bla regulator protein blaR1 D HMPREF9137_1763 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HMPREF9137_1062 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1928 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1064 efflux transporter, outer membrane factor lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HMPREF9137_1926 efflux transporter, outer membrane factor lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HMPREF9137_0007 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HMPREF9137_2310 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HMPREF9137_1233 penicillin-binding protein, transpeptidase domain protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HMPREF9137_2097 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HMPREF9137_0791 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pdn01502] D HMPREF9137_0631 ddpX; D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D HMPREF9137_0399 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HMPREF9137_2283 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D HMPREF9137_0414 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HMPREF9137_0789 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HMPREF9137_0786 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pdn01503] D HMPREF9137_2497 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HMPREF9137_1111 peptidase Do K04771 degP; serine protease Do [EC:3.4.21.107] D HMPREF9137_1062 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1928 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_0005 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pdn01000] C 01001 Protein kinases [BR:pdn01001] D HMPREF9137_0604 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HMPREF9137_0401 PASTA domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HMPREF9137_1099 putative phage head-tail adaptor K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D HMPREF9137_0202 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:pdn01009] D HMPREF9137_1011 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HMPREF9137_1339 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG D HMPREF9137_2166 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:pdn01002] D HMPREF9137_2461 putative signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D HMPREF9137_1730 peptidase C1-like family K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D HMPREF9137_1452 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HMPREF9137_1360 class II glutamine amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HMPREF9137_1359 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HMPREF9137_0711 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D HMPREF9137_0311 peptidase, C69 family K08659 pepDA; dipeptidase [EC:3.4.-.-] D HMPREF9137_1808 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein D HMPREF9137_2049 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein D HMPREF9137_1245 peptidase family M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D HMPREF9137_0078 M6 family metalloprotease domain protein K09607 ina; immune inhibitor A [EC:3.4.24.-] D HMPREF9137_2083 M6 family metalloprotease domain protein K09607 ina; immune inhibitor A [EC:3.4.24.-] D HMPREF9137_0810 peptidase family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D HMPREF9137_1658 peptidase family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D HMPREF9137_1958 peptidase M15 K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HMPREF9137_0631 ddpX; D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D HMPREF9137_0010 peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D HMPREF9137_0417 peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D HMPREF9137_1562 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D HMPREF9137_0071 pepD; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D HMPREF9137_1691 pepD; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D HMPREF9137_0940 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HMPREF9137_2322 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HMPREF9137_1440 peptidase, M24 family K14213 PEPD; Xaa-Pro dipeptidase [EC:3.4.13.9] D HMPREF9137_0883 Creatinase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D HMPREF9137_0643 peptidase, M28 family K00683 QPCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D HMPREF9137_1715 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HMPREF9137_0847 peptidase, M48 family K07387 K07387; metalloprotease [EC:3.4.24.-] D HMPREF9137_1294 peptidase family M49 K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4] D HMPREF9137_0836 putative RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D HMPREF9137_1762 peptidase, M56 family K02172 blaR1; bla regulator protein blaR1 D HMPREF9137_1111 peptidase Do K04771 degP; serine protease Do [EC:3.4.21.107] D HMPREF9137_0969 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF9137_2228 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF9137_1667 peptidase, S8/S53 family K17734 aprX; serine protease AprX [EC:3.4.21.-] D HMPREF9137_1288 peptidase, S9A/B/C family, catalytic domain protein K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D HMPREF9137_1131 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D HMPREF9137_1238 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D HMPREF9137_1781 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D HMPREF9137_0264 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HMPREF9137_0369 TIGR02688 family protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D HMPREF9137_1406 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D HMPREF9137_0606 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HMPREF9137_1023 peptidase, S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HMPREF9137_0748 peptidase, S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HMPREF9137_1247 peptidase, S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HMPREF9137_0624 peptidase, S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HMPREF9137_1196 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-] D HMPREF9137_2441 peptidase family S51 K05995 pepE; dipeptidase E [EC:3.4.13.21] D HMPREF9137_0410 peptidase, S54 family K07059 K07059; rhomboid family protein D HMPREF9137_0516 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-] D HMPREF9137_1501 peptidase, U32 family K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase C 01003 Glycosyltransferases [BR:pdn01003] D HMPREF9137_1551 glycosyltransferase, group 2 family protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D HMPREF9137_1479 glycosyltransferase, group 1 family protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D HMPREF9137_2406 starch synthase catalytic domain protein K00703 glgA; starch synthase [EC:2.4.1.21] D HMPREF9137_2482 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D HMPREF9137_0007 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HMPREF9137_2310 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HMPREF9137_0033 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pdn01005] D HMPREF9137_0005 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D HMPREF9137_1750 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D HMPREF9137_0004 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D HMPREF9137_0003 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D HMPREF9137_0320 Ser/Thr phosphatase family protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D HMPREF9137_1195 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D HMPREF9137_0534 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D HMPREF9137_0872 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D HMPREF9137_1181 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D HMPREF9137_2340 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D HMPREF9137_2341 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D HMPREF9137_1182 sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HMPREF9137_0823 arylsulfatase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D HMPREF9137_0720 arylsulfatase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D HMPREF9137_0528 glycosyltransferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D HMPREF9137_0033 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pdn01011] D HMPREF9137_0833 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HMPREF9137_0187 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HMPREF9137_0785 putative UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HMPREF9137_0788 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HMPREF9137_0790 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HMPREF9137_2283 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D HMPREF9137_0399 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HMPREF9137_0554 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HMPREF9137_0789 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HMPREF9137_0786 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HMPREF9137_1085 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HMPREF9137_1253 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HMPREF9137_0007 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HMPREF9137_2310 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HMPREF9137_1233 penicillin-binding protein, transpeptidase domain protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HMPREF9137_2097 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HMPREF9137_0791 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HMPREF9137_1781 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D HMPREF9137_2482 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D HMPREF9137_0631 ddpX; D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D HMPREF9137_1958 peptidase M15 K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HMPREF9137_0100 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D HMPREF9137_2200 putative rare lipoprotein A double-psi beta-barrel protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D HMPREF9137_2497 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:pdn01004] D HMPREF9137_1911 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HMPREF9137_0274 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HMPREF9137_1626 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HMPREF9137_2056 Beta-ketoacyl synthase, N-terminal domain protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D HMPREF9137_2064 Beta-ketoacyl synthase, C-terminal domain protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D HMPREF9137_0496 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF9137_2066 Beta-ketoacyl synthase, C-terminal domain protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF9137_0173 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF9137_2055 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF9137_0004 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D HMPREF9137_0362 hypothetical protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HMPREF9137_0471 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF9137_0351 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1306 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1307 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1552 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:pdn01006] D HMPREF9137_2101 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HMPREF9137_0579 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HMPREF9137_0559 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HMPREF9137_0006 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HMPREF9137_1476 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HMPREF9137_0214 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D HMPREF9137_0820 prenyltransferase, UbiA family K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:pdn01007] D HMPREF9137_0871 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF9137_2488 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D HMPREF9137_0436 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HMPREF9137_0874 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HMPREF9137_0501 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HMPREF9137_0341 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HMPREF9137_0343 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HMPREF9137_2459 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HMPREF9137_2444 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HMPREF9137_0577 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HMPREF9137_1700 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF9137_2413 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HMPREF9137_0245 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D HMPREF9137_1170 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HMPREF9137_0223 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HMPREF9137_0112 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HMPREF9137_1026 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HMPREF9137_2402 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HMPREF9137_1764 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HMPREF9137_0190 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HMPREF9137_2304 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HMPREF9137_2312 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1979 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF9137_1470 aminotransferase, class I/II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D HMPREF9137_2315 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HMPREF9137_0843 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D HMPREF9137_1409 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D HMPREF9137_1664 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HMPREF9137_2470 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pdn00194] D HMPREF9137_1013 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HMPREF9137_1012 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HMPREF9137_1020 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HMPREF9137_1019 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HMPREF9137_1018 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HMPREF9137_1017 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HMPREF9137_1016 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HMPREF9137_1015 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pdn03000] D HMPREF9137_0775 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D HMPREF9137_2255 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D HMPREF9137_1175 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D HMPREF9137_0390 LysR substrate binding domain protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D HMPREF9137_0286 transcriptional regulator, DeoR family K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D HMPREF9137_2026 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HMPREF9137_0730 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D HMPREF9137_1625 transcriptional regulator, TetR family K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D HMPREF9137_0960 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D HMPREF9137_0645 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D HMPREF9137_0955 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HMPREF9137_1168 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HMPREF9137_2284 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HMPREF9137_2457 transcriptional regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D HMPREF9137_2354 cyclic nucleotide-binding domain protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D HMPREF9137_1763 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HMPREF9137_0219 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HMPREF9137_1747 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HMPREF9137_0474 arginine repressor, C-terminal domain protein K03402 argR; transcriptional regulator of arginine metabolism D HMPREF9137_0473 PspC domain protein K03973 pspC; phage shock protein C D HMPREF9137_2460 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D HMPREF9137_0794 putative protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:pdn03021] D HMPREF9137_0370 hypothetical protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HMPREF9137_0946 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HMPREF9137_0902 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HMPREF9137_0903 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HMPREF9137_2485 sigma-70, region 4 K03086 rpoD; RNA polymerase primary sigma factor D HMPREF9137_1024 Sigma-70 region 2 K03086 rpoD; RNA polymerase primary sigma factor D HMPREF9137_1110 Sigma-70 region 2 K03086 rpoD; RNA polymerase primary sigma factor D HMPREF9137_0614 Sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HMPREF9137_2181 RNA polymerase sigma-70 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D HMPREF9137_0514 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D HMPREF9137_0746 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D HMPREF9137_1685 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HMPREF9137_0897 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D HMPREF9137_2460 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D HMPREF9137_0307 prokaryotic transcription elongation factor, GreA/GreB domain protein K03624 greA; transcription elongation factor GreA D HMPREF9137_2372 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:pdn03019] D HMPREF9137_0198 S1 RNA binding domain protein K08301 rng; ribonuclease G [EC:3.1.26.-] D HMPREF9137_0497 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HMPREF9137_1105 YmdA/YtgF family protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D HMPREF9137_0541 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HMPREF9137_0656 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HMPREF9137_0262 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF9137_1436 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF9137_1277 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF9137_0650 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HMPREF9137_2372 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D HMPREF9137_1011 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HMPREF9137_1820 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF9137_1342 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF9137_1061 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:pdn03011] D HMPREF9137_2017 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HMPREF9137_0699 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HMPREF9137_0925 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HMPREF9137_0945 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HMPREF9137_0936 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HMPREF9137_1918 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HMPREF9137_0916 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HMPREF9137_0933 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HMPREF9137_0698 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HMPREF9137_0918 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HMPREF9137_0944 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HMPREF9137_0915 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HMPREF9137_0943 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HMPREF9137_0932 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14 D HMPREF9137_1080 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HMPREF9137_1319 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HMPREF9137_0928 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HMPREF9137_1917 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HMPREF9137_0923 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HMPREF9137_0777 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HMPREF9137_0887 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HMPREF9137_0899 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HMPREF9137_0922 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HMPREF9137_0919 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HMPREF9137_0920 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HMPREF9137_0931 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HMPREF9137_0934 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HMPREF9137_1916 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HMPREF9137_0900 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HMPREF9137_0898 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HMPREF9137_0901 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HMPREF9137_0697 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HMPREF9137_0929 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HMPREF9137_0938 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HMPREF9137_0926 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HMPREF9137_0947 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HMPREF9137_0935 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HMPREF9137_0040 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HMPREF9137_1171 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HMPREF9137_1498 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HMPREF9137_0924 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HMPREF9137_0921 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HMPREF9137_0930 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HMPREF9137_1499 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HMPREF9137_2325 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HMPREF9137_0927 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HMPREF9137_0937 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HMPREF9137_1834 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HMPREF9137_2326 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HMPREF9137_0402 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HMPREF9137_1172 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HMPREF9137_0942 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HMPREF9137_1686 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D HMPREF9137_0279 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_2121 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_0855 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_0468 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_2117 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0470 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0853 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0283 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0280 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_2120 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_0854 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_0469 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pdn03009] D HMPREF9137_0497 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HMPREF9137_0273 era; ribosome biogenesis GTPase Era K03595 era; GTPase D HMPREF9137_0048 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D HMPREF9137_2460 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D HMPREF9137_0746 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D HMPREF9137_1685 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HMPREF9137_0897 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D HMPREF9137_1693 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HMPREF9137_1767 putative RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D HMPREF9137_2207 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D HMPREF9137_2379 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HMPREF9137_0793 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D HMPREF9137_2276 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HMPREF9137_2343 putative rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D HMPREF9137_2384 PUA domain protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D HMPREF9137_1237 THUMP domain protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D HMPREF9137_1511 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HMPREF9137_2299 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D HMPREF9137_0308 pseudouridine synthase, RluA family K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D HMPREF9137_0244 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HMPREF9137_0400 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HMPREF9137_0172 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HMPREF9137_0091 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HMPREF9137_0834 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D HMPREF9137_1352 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D HMPREF9137_2358 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D HMPREF9137_0198 S1 RNA binding domain protein K08301 rng; ribonuclease G [EC:3.1.26.-] D HMPREF9137_0115 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D HMPREF9137_2471 DEAD/DEAH box helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D HMPREF9137_0656 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HMPREF9137_1696 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HMPREF9137_0272 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D HMPREF9137_2218 hflX; GTP-binding protein HflX K03665 hflX; GTPase D HMPREF9137_1491 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HMPREF9137_2374 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HMPREF9137_1744 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HMPREF9137_0444 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D HMPREF9137_0455 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D HMPREF9137_0747 hypothetical protein K09748 rimP; ribosome maturation factor RimP D HMPREF9137_1714 iojap-like protein K09710 ybeB; ribosome-associated protein D HMPREF9137_0632 ybeY; translation metalloprotein YbeY K07042 ybeY; probable rRNA maturation factor D HMPREF9137_0889 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D HMPREF9137_0498 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D HMPREF9137_0275 putative ACR, COG1399 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pdn03016] D HMPREF9137_2448 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D HMPREF9137_0871 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF9137_1026 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HMPREF9137_2459 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HMPREF9137_0577 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HMPREF9137_0343 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HMPREF9137_2488 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D HMPREF9137_0341 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HMPREF9137_1700 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF9137_2413 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HMPREF9137_1764 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HMPREF9137_0245 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D HMPREF9137_0223 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HMPREF9137_2402 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HMPREF9137_0112 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HMPREF9137_0501 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HMPREF9137_2444 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HMPREF9137_1170 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HMPREF9137_0190 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HMPREF9137_2304 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HMPREF9137_0436 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HMPREF9137_0874 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HMPREF9137_0583 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D HMPREF9137_0306 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HMPREF9137_1212 putative tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D HMPREF9137_0192 methyltransferase, YaeB family K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D HMPREF9137_2330 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D HMPREF9137_1084 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D HMPREF9137_1005 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] D HMPREF9137_1491 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HMPREF9137_0006 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HMPREF9137_1476 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HMPREF9137_1329 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D HMPREF9137_0586 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HMPREF9137_0434 putative ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D HMPREF9137_1163 rnpB; Bacterial RNase P class A K01978 rnpB; M1 RNA D HMPREF9137_2235 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA D HMPREF9137_0217 cytidine and deoxycytidylate deaminase zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D HMPREF9137_0407 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D HMPREF9137_0531 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HMPREF9137_1838 yqeV; tRNA methylthiotransferase YqeV K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D HMPREF9137_1133 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D HMPREF9137_1407 methyltransferase domain protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D HMPREF9137_2316 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family D HMPREF9137_0308 pseudouridine synthase, RluA family K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D HMPREF9137_1083 putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D HMPREF9137_1252 putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D HMPREF9137_0109 protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HMPREF9137_1651 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HMPREF9137_1151 putative iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D HMPREF9137_1405 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HMPREF9137_2383 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D HMPREF9137_0831 yeaZ; universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D HMPREF9137_2323 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D HMPREF9137_0065 hydrolase, P-loop family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HMPREF9137_0260 ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D HMPREF9137_0541 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HMPREF9137_0650 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pdn03012] D HMPREF9137_0745 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HMPREF9137_1173 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HMPREF9137_1659 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D HMPREF9137_0700 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D HMPREF9137_0894 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D HMPREF9137_0088 translation elongation factor G K02355 fusA; elongation factor G D HMPREF9137_0917 fusA; translation elongation factor G K02355 fusA; elongation factor G D HMPREF9137_2335 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D HMPREF9137_1695 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D HMPREF9137_0332 methyltransferase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D HMPREF9137_1687 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HMPREF9137_0941 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D HMPREF9137_0403 efp; translation elongation factor P K02356 efp; elongation factor P D HMPREF9137_0350 putative peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D HMPREF9137_1343 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:pdn03110] D HMPREF9137_1129 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HMPREF9137_2409 ATPase family associated with various cellular activities (AAA) K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D HMPREF9137_0263 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HMPREF9137_1339 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG D HMPREF9137_1820 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF9137_1342 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF9137_1864 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D HMPREF9137_1227 DnaJ domain protein K05516 cbpA; curved DNA-binding protein D HMPREF9137_1545 DnaJ domain protein K05801 djlA; DnaJ like chaperone protein D HMPREF9137_1863 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D HMPREF9137_1679 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D HMPREF9137_1688 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D HMPREF9137_1341 groS; chaperonin GroS K04078 groES; chaperonin GroES D HMPREF9137_1111 peptidase Do K04771 degP; serine protease Do [EC:3.4.21.107] D HMPREF9137_1715 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HMPREF9137_1015 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HMPREF9137_0969 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF9137_2228 peptidase, S8/S53 family K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF9137_0207 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HMPREF9137_2292 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HMPREF9137_0079 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D HMPREF9137_0224 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D HMPREF9137_0648 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D HMPREF9137_0646 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D HMPREF9137_1460 slyD; peptidyl-prolyl cis-trans isomerase SlyD, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D HMPREF9137_0248 putative phage tail component domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D HMPREF9137_0249 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D HMPREF9137_2126 trxA; thioredoxin K03671 TXN; thioredoxin D HMPREF9137_1846 antioxidant, AhpC/TSA family K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:pdn04131] D HMPREF9137_1475 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF9137_0096 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HMPREF9137_1339 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:pdn03051] D HMPREF9137_1339 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:pdn03032] D HMPREF9137_0340 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HMPREF9137_0197 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_0412 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_1351 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HMPREF9137_2477 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HMPREF9137_1770 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HMPREF9137_1416 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF9137_2125 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF9137_1271 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF9137_1543 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF9137_2224 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF9137_1270 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_1673 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_1559 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF9137_0740 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HMPREF9137_0578 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D HMPREF9137_1136 ligA; NAD-dependent DNA ligase OB-fold domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HMPREF9137_0950 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HMPREF9137_2475 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HMPREF9137_0776 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HMPREF9137_1821 DNA gyrase/topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D HMPREF9137_0626 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D HMPREF9137_0610 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HMPREF9137_1621 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D HMPREF9137_1154 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D HMPREF9137_2164 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pdn03036] D HMPREF9137_0497 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HMPREF9137_1323 ftcD; glutamate formimidoyltransferase K13990 FTCD; glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] D HMPREF9137_0197 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_0412 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_1351 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_1227 DnaJ domain protein K05516 cbpA; curved DNA-binding protein D HMPREF9137_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HMPREF9137_0246 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D HMPREF9137_0955 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HMPREF9137_0782 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D HMPREF9137_1035 ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D HMPREF9137_0791 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HMPREF9137_2386 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HMPREF9137_0783 hypothetical protein K03589 ftsQ; cell division protein FtsQ D HMPREF9137_0787 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW D HMPREF9137_1087 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein D HMPREF9137_0781 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HMPREF9137_2497 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HMPREF9137_1062 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1928 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_2094 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D HMPREF9137_2095 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D HMPREF9137_2098 cell cycle protein, FtsW/RodA/SpoVE family K05837 rodA; rod shape determining protein RodA D HMPREF9137_1973 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D HMPREF9137_1748 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D HMPREF9137_1747 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HMPREF9137_1821 DNA gyrase/topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D HMPREF9137_0626 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D HMPREF9137_0586 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HMPREF9137_2379 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HMPREF9137_0888 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D HMPREF9137_0441 putative tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D HMPREF9137_0364 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D HMPREF9137_2239 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D HMPREF9137_1729 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D HMPREF9137_1933 mrp; ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning D HMPREF9137_1812 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HMPREF9137_1814 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HMPREF9137_0179 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pdn03400] D HMPREF9137_2493 6-O-methylguanine DNA methyltransferase, DNA binding domain protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D HMPREF9137_0772 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HMPREF9137_0773 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HMPREF9137_2091 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HMPREF9137_2442 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HMPREF9137_2286 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HMPREF9137_1887 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HMPREF9137_0355 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HMPREF9137_1054 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HMPREF9137_1437 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HMPREF9137_1136 ligA; NAD-dependent DNA ligase OB-fold domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HMPREF9137_0578 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D HMPREF9137_1068 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D HMPREF9137_1078 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D HMPREF9137_0057 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D HMPREF9137_0584 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D HMPREF9137_0059 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF9137_2481 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF9137_0902 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HMPREF9137_0903 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HMPREF9137_0370 hypothetical protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HMPREF9137_0946 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HMPREF9137_1705 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HMPREF9137_0490 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D HMPREF9137_1207 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D HMPREF9137_0252 mutL; DNA mismatch repair domain protein K03572 mutL; DNA mismatch repair protein MutL D HMPREF9137_1666 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HMPREF9137_1665 putative exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HMPREF9137_2125 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF9137_1271 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF9137_1543 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF9137_2224 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF9137_1270 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_1673 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF9137_1559 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF9137_1416 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF9137_0950 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HMPREF9137_2234 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D HMPREF9137_1757 recA; RecA protein K03553 recA; recombination protein RecA D HMPREF9137_1785 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HMPREF9137_0639 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HMPREF9137_2381 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HMPREF9137_0868 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D HMPREF9137_1283 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D HMPREF9137_0131 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D HMPREF9137_0371 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF9137_1656 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF9137_0708 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF9137_0779 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HMPREF9137_0962 recR; recombination protein RecR K06187 recR; recombination protein RecR D HMPREF9137_1267 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D HMPREF9137_2399 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D HMPREF9137_2475 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HMPREF9137_0776 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HMPREF9137_0610 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HMPREF9137_0197 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_0412 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_1351 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_0262 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF9137_1436 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF9137_0016 ImpB/MucB/SamB family protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D HMPREF9137_1311 ImpB/MucB/SamB family protein K03502 umuC; DNA polymerase V D HMPREF9137_1796 dinD; DNA-damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D D HMPREF9137_0331 putative regulatory protein RecX K03565 recX; regulatory protein D HMPREF9137_2495 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF9137_0548 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF9137_0547 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HMPREF9137_1071 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:pdn03029] D HMPREF9137_0745 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HMPREF9137_1173 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HMPREF9137_0700 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D HMPREF9137_0894 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D HMPREF9137_0088 translation elongation factor G K02355 fusA; elongation factor G D HMPREF9137_0917 fusA; translation elongation factor G K02355 fusA; elongation factor G D HMPREF9137_0273 era; ribosome biogenesis GTPase Era K03595 era; GTPase D HMPREF9137_0436 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HMPREF9137_0577 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HMPREF9137_2413 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HMPREF9137_0223 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HMPREF9137_0341 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HMPREF9137_1835 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D HMPREF9137_1416 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF9137_0558 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family D HMPREF9137_1820 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF9137_1863 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D HMPREF9137_1342 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF9137_1341 groS; chaperonin GroS K04078 groES; chaperonin GroES D HMPREF9137_1864 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D HMPREF9137_1933 mrp; ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning D HMPREF9137_1905 yidC; membrane protein insertase, YidC/Oxa1 family domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HMPREF9137_1339 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pdn02000] D HMPREF9137_1614 ABC transporter, ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HMPREF9137_1613 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HMPREF9137_0532 ABC transporter, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D HMPREF9137_0754 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF9137_1632 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF9137_2003 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF9137_0713 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF9137_0180 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D HMPREF9137_1284 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D HMPREF9137_2498 putative virulence factor Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HMPREF9137_0267 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HMPREF9137_0268 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HMPREF9137_1332 hypothetical protein K25034 btuF; cobalamin transport system substrate-binding protein D HMPREF9137_1331 iron chelate uptake ABC transporter, FeCT family, permease protein K25027 btuC; cobalamin transport system permease protein D HMPREF9137_0427 ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D HMPREF9137_1880 permease, YjgP/YjgQ family K07091 lptF; lipopolysaccharide export system permease protein D HMPREF9137_1404 permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein D HMPREF9137_0266 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HMPREF9137_0502 hypothetical protein K19341 nosY; Cu-processing system permease protein D HMPREF9137_0503 ABC transporter, ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D HMPREF9137_1530 ABC-2 type transporter K25180 ybhR; drug efflux transport system permease protein D HMPREF9137_1529 putative ABC transporter K25181 ybhS; drug efflux transport system permease protein D HMPREF9137_1528 ABC transporter, ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D HMPREF9137_1527 auxiliary transport protein, membrane fusion protein (MFP) family protein K25183 ybhG; membrane fusion protein YbhG D HMPREF9137_0445 efflux ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D HMPREF9137_0456 efflux ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D HMPREF9137_2311 efflux ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D HMPREF9137_0258 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D HMPREF9137_1087 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein D HMPREF9137_1035 ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D HMPREF9137_1155 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF9137_1741 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF9137_1156 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF9137_0181 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF9137_1743 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF9137_1751 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF9137_1740 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF9137_0743 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D HMPREF9137_1333 transporter, DASS family K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D HMPREF9137_0226 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D HMPREF9137_1539 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D HMPREF9137_1485 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D HMPREF9137_2254 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D HMPREF9137_1176 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D HMPREF9137_1304 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D HMPREF9137_1885 transporter, major facilitator family protein K02429 fucP; MFS transporter, FHS family, L-fucose permease D HMPREF9137_2435 transporter, major facilitator family protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D HMPREF9137_1139 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HMPREF9137_1923 transporter, major facilitator family protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HMPREF9137_2089 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HMPREF9137_0587 transporter, major facilitator family protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D HMPREF9137_0392 MIP family channel protein K02440 glpF; glycerol uptake facilitator D HMPREF9137_1256 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog D HMPREF9137_1257 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog D HMPREF9137_1474 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D HMPREF9137_1178 transporter, small conductance mechanosensitive ion channel MscS family protein K05802 mscK; potassium-dependent mechanosensitive channel D HMPREF9137_1780 transporter, small conductance mechanosensitive ion channel MscS family protein K16053 ybdG; miniconductance mechanosensitive channel D HMPREF9137_0285 OmpA family protein K02557 motB; chemotaxis protein MotB D HMPREF9137_0956 transporter, MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D HMPREF9137_1980 transporter, MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D HMPREF9137_1709 CorA-like protein K03284 corA; magnesium transporter D HMPREF9137_1226 crcB; protein CrcB K06199 crcB; fluoride exporter D HMPREF9137_1417 gldE; gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family D HMPREF9137_0080 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HMPREF9137_2454 phosphate-selective porin O and P K07221 oprO_P; phosphate-selective porin OprO and OprP D HMPREF9137_0253 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D HMPREF9137_0869 outer membrane protein transport protein, Ompp1/FadL/TodX family K06076 fadL; long-chain fatty acid transport protein D HMPREF9137_1535 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D HMPREF9137_1045 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D HMPREF9137_0597 TonB-linked outer membrane protein, SusC/RagA family K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D HMPREF9137_1871 TonB-linked outer membrane protein, SusC/RagA family K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D HMPREF9137_0731 TonB-linked outer membrane protein, SusC/RagA family K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D HMPREF9137_1842 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D HMPREF9137_0589 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D HMPREF9137_1242 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HMPREF9137_0692 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HMPREF9137_1722 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HMPREF9137_2297 TonB-dependent receptor plug domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HMPREF9137_0278 TonB-dependent receptor plug domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HMPREF9137_1064 efflux transporter, outer membrane factor lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HMPREF9137_1926 efflux transporter, outer membrane factor lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HMPREF9137_1358 polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein D HMPREF9137_0558 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family D HMPREF9137_0056 yfiO; outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD D HMPREF9137_2156 hypothetical protein K21449 ata; trimeric autotransporter adhesin D HMPREF9137_0729 transporter, major facilitator family protein K16211 malY; maltose/moltooligosaccharide transporter D HMPREF9137_2331 putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein D HMPREF9137_0736 transporter, anaerobic C4-dicarboxylate uptake (Dcu) family K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D HMPREF9137_1674 K+-dependent Na+/Ca+ exchanger family protein K07301 yrbG; cation:H+ antiporter D HMPREF9137_1561 TrkA C-terminal domain protein K26735 KEA4_5_6; K+:H+ antiporter D HMPREF9137_0257 transporter, CPA2 family K26730 napA; Na+:H+ antiporter D HMPREF9137_0231 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D HMPREF9137_0230 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein D HMPREF9137_1330 putative permease K02824 uraA; uracil permease D HMPREF9137_1047 pbuX; xanthine permease K16345 xanP; xanthine permease XanP D HMPREF9137_1398 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease D HMPREF9137_1490 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family D HMPREF9137_0837 chromate transport protein K07240 chrA; chromate transporter D HMPREF9137_0838 chromate transport protein K07240 chrA; chromate transporter D HMPREF9137_0099 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family K03322 mntH; manganese transport protein D HMPREF9137_0564 putative Na/Pi-cotransporter II-like protein K03324 yjbB; phosphate:Na+ symporter D HMPREF9137_1503 eamB; cysteine/O-acetylserine efflux protein K11249 eamB; cysteine/O-acetylserine efflux protein D HMPREF9137_1649 putative membrane protein K09125 yhhQ; queuosine precursor transporter D HMPREF9137_0787 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW D HMPREF9137_0768 TonB family domain protein K03832 tonB; periplasmic protein TonB D HMPREF9137_1983 TonB-dependent receptor K03832 tonB; periplasmic protein TonB D HMPREF9137_2100 TonB-dependent receptor K03832 tonB; periplasmic protein TonB D HMPREF9137_2338 TonB-dependent receptor K03832 tonB; periplasmic protein TonB D HMPREF9137_1206 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein D HMPREF9137_2287 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D HMPREF9137_2365 carboxyl transferase domain protein K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D HMPREF9137_2367 Biotin-requiring enzyme K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D HMPREF9137_1062 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1928 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1099 putative phage head-tail adaptor K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D HMPREF9137_0420 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0702 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_2110 Tat pathway signal sequence domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_2029 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0763 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0014 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0663 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_1995 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0997 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0389 tetratricopeptide repeat protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0669 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0971 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_1896 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0596 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_1733 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_0732 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_1870 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D HMPREF9137_2296 pnuC; nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D HMPREF9137_2031 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D HMPREF9137_1487 Mg2+ transporter-C family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:pdn02044] D HMPREF9137_1246 cytidine and deoxycytidylate deaminase zinc-binding region K01493 comEB; dCMP deaminase [EC:3.5.4.12] D HMPREF9137_2329 ComEC/Rec2-like protein K02238 comEC; competence protein ComEC D HMPREF9137_0182 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HMPREF9137_0408 secD; export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D HMPREF9137_0896 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HMPREF9137_1505 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HMPREF9137_0939 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D HMPREF9137_1426 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HMPREF9137_1353 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HMPREF9137_1684 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HMPREF9137_1905 yidC; membrane protein insertase, YidC/Oxa1 family domain protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:pdn02042] D HMPREF9137_1417 gldE; gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family D HMPREF9137_0080 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HMPREF9137_0590 F5/8 type C domain protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 02022 Two-component system [BR:pdn02022] D HMPREF9137_0202 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HMPREF9137_0203 rprY; transcriptional regulatory protein RprY K02483 K02483; two-component system, OmpR family, response regulator D HMPREF9137_0509 LytTr DNA-binding domain protein K02477 K02477; two-component system, LytTR family, response regulator D HMPREF9137_2186 response regulator receiver domain protein K02477 K02477; two-component system, LytTR family, response regulator C 02035 Bacterial motility proteins [BR:pdn02035] D HMPREF9137_0285 OmpA family protein K02557 motB; chemotaxis protein MotB C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pdn04812] D HMPREF9137_2094 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D HMPREF9137_0781 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HMPREF9137_0782 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D HMPREF9137_1973 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D HMPREF9137_1748 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D HMPREF9137_1747 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pdn04147] D HMPREF9137_1339 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K04079 HSP90A; molecular chaperone HtpG D HMPREF9137_1277 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF9137_1475 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF9137_2344 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HMPREF9137_0096 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HMPREF9137_1342 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF9137_1820 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF9137_1698 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF9137_1131 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D HMPREF9137_1238 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D HMPREF9137_0247 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HMPREF9137_0894 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D HMPREF9137_0306 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HMPREF9137_0351 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1306 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_1307 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF9137_0049 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HMPREF9137_0585 putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HMPREF9137_1323 ftcD; glutamate formimidoyltransferase K13990 FTCD; glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] D HMPREF9137_0993 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D HMPREF9137_1909 hypothetical protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D HMPREF9137_1792 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D HMPREF9137_1886 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HMPREF9137_1315 alpha amylase, catalytic domain protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D HMPREF9137_0393 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D HMPREF9137_0797 glnA; glutamate--ammonia ligase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_1467 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF9137_2469 pdxB; 4-phosphoerythronate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HMPREF9137_0045 AICARFT/IMPCHase bienzyme K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HMPREF9137_2189 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF9137_1772 etfA; electron transfer flavoprotein FAD-binding domain protein K03522 fixB; electron transfer flavoprotein alpha subunit C 02048 Prokaryotic defense system [BR:pdn02048] D HMPREF9137_2399 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D HMPREF9137_2401 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D HMPREF9137_2301 hypothetical protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D HMPREF9137_0950 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HMPREF9137_2009 Eco57I restriction endonuclease K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HMPREF9137_2263 DNA (cytosine-5-)-methyltransferase K24451 zim; modification methylase D HMPREF9137_0949 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D HMPREF9137_0473 PspC domain protein K03973 pspC; phage shock protein C D HMPREF9137_1243 YhcH/YjgK/YiaL family protein K19334 tabA; biofilm protein TabA D HMPREF9137_0781 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HMPREF9137_2094 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D HMPREF9137_1821 DNA gyrase/topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D HMPREF9137_0626 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D HMPREF9137_0871 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:pdn04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pdn04090] D HMPREF9137_1131 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D HMPREF9137_1238 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:pdn01504] D HMPREF9137_1762 peptidase, M56 family K02172 blaR1; bla regulator protein blaR1 D HMPREF9137_1763 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HMPREF9137_0631 ddpX; D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D HMPREF9137_1062 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1928 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1064 efflux transporter, outer membrane factor lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D HMPREF9137_1926 efflux transporter, outer membrane factor lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:pdn00536] D HMPREF9137_0590 F5/8 type C domain protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pdn00537] D HMPREF9137_0991 alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D HMPREF9137_0590 F5/8 type C domain protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pdn03100] D HMPREF9137_0281 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF9137_2119 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF9137_0312 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF9137_1960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF9137_1348 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF9137_1564 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF9137_0749 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HMPREF9137_0966 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HMPREF9137_0967 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HMPREF9137_1167 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HMPREF9137_0439 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HMPREF9137_1713 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HMPREF9137_0778 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF9137_0076 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF9137_0077 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF9137_1411 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF9137_1414 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF9137_1374 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF9137_0892 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF9137_1504 tRNA-His K14226 tRNA-His; tRNA His D HMPREF9137_0282 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HMPREF9137_2118 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HMPREF9137_1412 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_0446 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_1788 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_1413 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_0384 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF9137_2346 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF9137_1668 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF9137_1669 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF9137_1876 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF9137_1929 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF9137_2051 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF9137_1192 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HMPREF9137_1410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF9137_0415 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF9137_0070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF9137_0075 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF9137_2466 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF9137_2127 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF9137_0989 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF9137_2347 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF9137_0890 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF9137_1373 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF9137_0893 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF9137_0895 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HMPREF9137_0891 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HMPREF9137_1396 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HMPREF9137_0241 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF9137_1397 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF9137_0242 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF9137_2117 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0470 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0853 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0283 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF9137_0280 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_2120 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_0854 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_0469 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF9137_0279 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_2121 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_0855 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_0468 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF9137_2348 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D HMPREF9137_1163 rnpB; Bacterial RNase P class A K01978 rnpB; M1 RNA D HMPREF9137_1576 ssrA_1; ssrA_1 K15035 ssrA; transfer-messenger RNA D HMPREF9137_1641 ssrA_2; ssrA_2 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HMPREF9137_0422 ahpF; alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D HMPREF9137_1213 msrB; methionine-R-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D HMPREF9137_0800 antioxidant, AhpC/TSA family K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HMPREF9137_0423 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D HMPREF9137_0756 putative superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2] D HMPREF9137_1663 ftnA; ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D HMPREF9137_1959 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D HMPREF9137_1336 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HMPREF9137_1861 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HMPREF9137_0188 bacterial transferase hexapeptide repeat protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D HMPREF9137_1488 bacterial transferase hexapeptide repeat protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D HMPREF9137_1951 hypothetical protein K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281] D HMPREF9137_2294 hypothetical protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D HMPREF9137_0499 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D HMPREF9137_2353 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D HMPREF9137_0483 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D HMPREF9137_0316 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D HMPREF9137_2438 GDSL-like protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D HMPREF9137_0653 acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HMPREF9137_2063 acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HMPREF9137_0870 7TM receptor with intracellular HD hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D HMPREF9137_2102 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HMPREF9137_1590 hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D HMPREF9137_2136 hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D HMPREF9137_1868 glycosyl hydrolase, family 53 K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D HMPREF9137_1997 glycosyl hydrolase, family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D HMPREF9137_0723 alpha amylase, catalytic domain protein K21575 susA; neopullulanase [EC:3.2.1.135] D HMPREF9137_0114 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HMPREF9137_1209 glycosyltransferase, group 2 family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D HMPREF9137_1152 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D HMPREF9137_0044 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D HMPREF9137_1260 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D HMPREF9137_1854 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D HMPREF9137_0051 YjeF domain protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HMPREF9137_1953 N-acylglucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11] D HMPREF9137_2436 cyclically-permuted mutarotase family protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24] D HMPREF9137_2019 nqrA; NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D HMPREF9137_2021 nqrB; NADH:ubiquinone oxidoreductase, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D HMPREF9137_2022 nqrC; NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D HMPREF9137_2023 nqrD; NADH:ubiquinone oxidoreductase, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D HMPREF9137_2024 nqrE; NADH:ubiquinone oxidoreductase, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D HMPREF9137_2025 nqrF; NADH:ubiquinone oxidoreductase, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D HMPREF9137_1654 copper-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D HMPREF9137_1003 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D HMPREF9137_0406 cadA; cadmium-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D HMPREF9137_1274 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D HMPREF9137_1275 putative iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D HMPREF9137_1276 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D HMPREF9137_1463 flavodoxin K03839 fldA; flavodoxin I D HMPREF9137_1771 electron transfer flavoprotein domain protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D HMPREF9137_2314 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D HMPREF9137_1692 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D HMPREF9137_1008 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D HMPREF9137_0265 tig; trigger factor K03545 tig; trigger factor D HMPREF9137_2321 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D HMPREF9137_0448 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein D HMPREF9137_1354 OsmC-like protein K07397 yhfA; putative redox protein C 99976 Replication and repair D HMPREF9137_1125 6-O-methylguanine DNA methyltransferase, DNA binding domain protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D HMPREF9137_0290 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D HMPREF9137_2233 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC D HMPREF9137_0218 hypothetical protein K07460 yraN; putative endonuclease D HMPREF9137_0652 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein D HMPREF9137_1963 recombination factor protein RarA K07478 ycaJ; putative ATPase D HMPREF9137_0336 transposase, IS4 family K07481 K07481; transposase, IS5 family D HMPREF9137_1609 transposase K07485 K07485; transposase D HMPREF9137_2006 transposase K07485 K07485; transposase D HMPREF9137_2161 transposase K07485 K07485; transposase D HMPREF9137_2432 transposase K07485 K07485; transposase D HMPREF9137_1480 transposase, IS116/IS110/IS902 family K07486 K07486; transposase D HMPREF9137_0137 transposase, IS116/IS110/IS902 family K07486 K07486; transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HMPREF9137_1952 transporter, major facilitator family protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D HMPREF9137_1063 RND transporter, HAE1 family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D HMPREF9137_1927 RND transporter, HAE1 family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D HMPREF9137_1074 putative ATP synthase F0, A subunit K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D HMPREF9137_0346 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D HMPREF9137_1007 agcS; amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HMPREF9137_2417 sodium bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D HMPREF9137_0973 TrkA C-terminal domain protein K07085 K07085; putative transport protein D HMPREF9137_0428 TrkA C-terminal domain protein K07085 K07085; putative transport protein C 99978 Cell growth D HMPREF9137_1677 putative iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D HMPREF9137_0352 peptidase, M23 family K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D HMPREF9137_1079 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein D HMPREF9137_0106 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D HMPREF9137_2068 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D HMPREF9137_0074 outer membrane protein K06142 hlpA; outer membrane protein D HMPREF9137_0555 outer membrane protein K06142 hlpA; outer membrane protein D HMPREF9137_0556 outer membrane protein K06142 hlpA; outer membrane protein D HMPREF9137_0557 outer membrane protein K06142 hlpA; outer membrane protein D HMPREF9137_1280 glycosyl hydrolase family 25 K07273 acm; lysozyme D HMPREF9137_2033 glycosyl hydrolase family 25 K07273 acm; lysozyme D HMPREF9137_1157 auxiliary transport protein, membrane fusion protein (MFP) family protein K01993 ABC-2.TX; HlyD family secretion protein D HMPREF9137_0734 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F D HMPREF9137_0733 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F D HMPREF9137_1869 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F C 99994 Others D HMPREF9137_1719 CutC family protein K06201 cutC; copper homeostasis protein D HMPREF9137_0504 hypothetical protein K07218 nosD; nitrous oxidase accessory protein D HMPREF9137_0505 hypothetical protein K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D HMPREF9137_1989 oxidoreductase, NAD-binding domain protein K03810 mviM; virulence factor D HMPREF9137_0314 phospholipase, patatin family K07001 K07001; NTE family protein D HMPREF9137_1355 haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D HMPREF9137_1365 haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D HMPREF9137_0744 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D HMPREF9137_0742 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D HMPREF9137_0517 sufE; Fe-S metabolism associated domain protein K02426 sufE; cysteine desulfuration protein SufE D HMPREF9137_2451 hypothetical protein K21741 rclC; reactive chlorine resistance protein C C 99997 Function unknown D HMPREF9137_1629 radical SAM domain protein K06871 K06871; uncharacterized protein D HMPREF9137_2005 radical SAM domain protein K06871 K06871; uncharacterized protein D HMPREF9137_0002 HD domain protein K06885 K06885; uncharacterized protein D HMPREF9137_0849 hypothetical protein K06890 K06890; uncharacterized protein D HMPREF9137_0538 hypothetical protein K06921 K06921; uncharacterized protein D HMPREF9137_0215 HD domain protein K06950 K06950; uncharacterized protein D HMPREF9137_2103 HDIG domain protein K06950 K06950; uncharacterized protein D HMPREF9137_0358 hypothetical protein K07000 K07000; uncharacterized protein D HMPREF9137_1612 hypothetical protein K07003 K07003; uncharacterized protein D HMPREF9137_2076 Acyltransferase K07003 K07003; uncharacterized protein D HMPREF9137_1971 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D HMPREF9137_0545 arylsulfatase K07014 K07014; uncharacterized protein D HMPREF9137_0704 phosphodiesterase family protein K07095 K07095; uncharacterized protein D HMPREF9137_1302 phosphodiesterase family protein K07095 K07095; uncharacterized protein D HMPREF9137_1553 Ser/Thr phosphatase family protein K07098 K07098; uncharacterized protein D HMPREF9137_1484 Ser/Thr phosphatase family protein K07098 K07098; uncharacterized protein D HMPREF9137_1732 Ser/Thr phosphatase family protein K07098 K07098; uncharacterized protein D HMPREF9137_1522 hypothetical protein K07133 K07133; uncharacterized protein D HMPREF9137_2045 hypothetical protein K07133 K07133; uncharacterized protein D HMPREF9137_2450 FAD binding domain protein K07137 K07137; uncharacterized protein D HMPREF9137_1130 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein D HMPREF9137_1548 putative zinc ribbon domain protein K07164 K07164; uncharacterized protein D HMPREF9137_0435 conserved hypothetical protein YidD K08998 K08998; uncharacterized protein D HMPREF9137_2206 hypothetical protein K08999 K08999; uncharacterized protein D HMPREF9137_1009 hemerythrin HHE cation binding domain protein K09155 K09155; uncharacterized protein D HMPREF9137_1295 hypothetical protein K09704 K09704; uncharacterized protein D HMPREF9137_2336 hypothetical protein K09805 K09805; uncharacterized protein D HMPREF9137_0259 hypothetical protein K00243 K00243; uncharacterized protein D HMPREF9137_1287 hypothetical protein K09861 K09861; uncharacterized protein D HMPREF9137_0317 hypothetical protein K01163 K01163; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024