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Mitochondrial Biogenesis - Pseudozyma flocculosa
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AMitochondrial DNA transcription, translation, and replication factors
B Mitochondrial DNA-encoded proteins
C Mitochondrial respiratory chain complex I
C Mitochondrial respiratory chain complex III
C Cytochrome c oxidase
C F-type ATPase
B Mitochondrial transcription and translation factors
C Mitochondrial RNA polymerase
D PFL1_01836 hypothetical protein K10908 POLRMT; DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
C Mitochondrial transcription factors
C Mitochondrial translation factors
D PFL1_01538 hypothetical protein K02519 infB; translation initiation factor IF-2
D PFL1_03148 hypothetical protein K02357 tsf; elongation factor Ts
D PFL1_00593 hypothetical protein K02358 tuf; elongation factor Tu
D PFL1_03577 hypothetical protein K02355 fusA; elongation factor G
D PFL1_02687 hypothetical protein K02355 fusA; elongation factor G
D PFL1_00086 hypothetical protein K21594 GUF1; translation factor GUF1, mitochondrial [EC:3.6.5.-]
C RNase MRP
D PFL1_05468 hypothetical protein K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D PFL1_06908 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PFL1_05494 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PFL1_05385 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Mitochondrial ribonuclease P
C Other mitochondrial DNA transcription and translation factors
D PFL1_01853 hypothetical protein K17656 MSS51; mitochondrial splicing suppressor protein 51
D PFL1_04397 hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D PFL1_02363 hypothetical protein K17669 PET309; pentatricopeptide repeat-containing protein PET309
D PFL1_00308 hypothetical protein K18798 AFG1; peroxisome-assembly ATPase [EC:3.6.4.7]
D PFL1_04419 hypothetical protein K18156 ATP23; mitochondrial inner membrane protease ATP23 [EC:3.4.24.-]
D PFL1_01617 hypothetical protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D PFL1_02742 hypothetical protein K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-]
D PFL1_05006 hypothetical protein K05863 SLC25A4S; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
D PFL1_00933 hypothetical protein K15113 SLC25A28_37; solute carrier family 25 (mitochondrial iron transporter), member 28/37
D PFL1_03123 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFL1_02639 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFL1_03195 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFL1_04773 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFL1_05509 hypothetical protein K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PFL1_01097 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFL1_03775 hypothetical protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PFL1_04438 hypothetical protein K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PFL1_03330 hypothetical protein K19828 MTG1; mitochondrial GTPase 1
D PFL1_01231 hypothetical protein K23495 RCC1L; RCC1-like G exchanging factor-like protein
D PFL1_06034 hypothetical protein K23499 RMND1; required for meiotic nuclear division protein 1
B Mitochondrial DNA replication factors
C Mitochondrial DNA polymerase
D PFL1_00955 hypothetical protein K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
C Mitochondrial DNA maintenance factors
D PFL1_04853 hypothetical protein K01173 ENDOG; endonuclease G, mitochondrial
D PFL1_02631 hypothetical protein K17677 IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]
D PFL1_06833 hypothetical protein K17679 MSS116; ATP-dependent RNA helicase MSS116, mitochondrial [EC:5.6.2.7]
D PFL1_02988 hypothetical protein K17679 MSS116; ATP-dependent RNA helicase MSS116, mitochondrial [EC:5.6.2.7]
D PFL1_06459 hypothetical protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D PFL1_03862 hypothetical protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
C Other Mitochondrial DNA replication factors
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AMitochondrial protein import machinery
B Endoplasmic reticulum membrane and cytosol
C ER-mitochondria encounter structure (ERMES) complex
D PFL1_01224 hypothetical protein K17764 MMM1; maintenance of mitochondrial morphology protein 1
D PFL1_05925 hypothetical protein K17765 MDM12; mitochondrial distribution and morphology protein 12
C Other ER-memrane and cytosol factors
D PFL1_02053 hypothetical protein K09503 DNAJA2; DnaJ homolog subfamily A member 2
D PFL1_01370 hypothetical protein K09503 DNAJA2; DnaJ homolog subfamily A member 2
D PFL1_02117 hypothetical protein K07870 RHOT1; mitochondrial Rho GTPase 1 [EC:3.6.5.-]
D PFL1_04090 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PFL1_06905 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
B Outer membrane
C Transporter outer membrane (TOM) complex
D PFL1_06112 hypothetical protein K11518 TOM40; mitochondrial import receptor subunit TOM40
D PFL1_02490 hypothetical protein K17768 TOM70; mitochondrial import receptor subunit TOM70
D PFL1_02338 hypothetical protein K17769 TOM22; mitochondrial import receptor subunit TOM22
D PFL1_02854 hypothetical protein K17770 TOM20; mitochondrial import receptor subunit TOM20
D PFL1_00132 hypothetical protein K17771 TOM7; mitochondrial import receptor subunit TOM7
C TOB/SAM complex
D PFL1_05090 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
C Porin
D PFL1_04609 hypothetical protein K15040 VDAC2; voltage-dependent anion channel protein 2
C ERMES complex
D PFL1_04069 hypothetical protein K17774 MDM10; mitochondrial distribution and morphology protein 10
D PFL1_02954 hypothetical protein K17775 MDM34; mitochondrial distribution and morphology protein 34
C Other outer membrane factor
D PFL1_02337 hypothetical protein K17776 MTX; metaxin
B Inter membrane space
C Transporter inner membrane (TIM) 9/10 complex
D PFL1_04862 hypothetical protein K17777 TIM9; mitochondrial import inner membrane translocase subunit TIM9
D PFL1_00602 hypothetical protein K17778 TIM10; mitochondrial import inner membrane translocase subunit TIM10
C TIM8/13 complex
D PFL1_03349 hypothetical protein K17780 TIM8; mitochondrial import inner membrane translocase subunit TIM8
D PFL1_03483 hypothetical protein K17781 TIM13; mitochondrial import inner membrane translocase subunit TIM13
C Mitochondrial intermembrane space assembly (MIA) complex
D PFL1_02524 hypothetical protein K17782 MIA40; mitochondrial intermembrane space import and assembly protein 40
B Inner mambrane
C MICOS complex
D PFL1_01195 hypothetical protein K17784 MICOS10; MICOS complex subunit MIC10
D PFL1_00574 hypothetical protein K17785 IMMT; MICOS complex subunit MIC60
C MICOS complex (yeast)
D PFL1_01195 hypothetical protein K17784 MICOS10; MICOS complex subunit MIC10
D PFL1_00574 hypothetical protein K17785 IMMT; MICOS complex subunit MIC60
D PFL1_01380 hypothetical protein K17788 MIC19; MICOS complex subunit MIC19
D PFL1_01605 hypothetical protein K17786 MIC26; MICOS complex subunit MIC26
C TIM22 complex
D PFL1_01975 hypothetical protein K17790 TIM22; mitochondrial import inner membrane translocase subunit TIM22
D PFL1_05466 hypothetical protein K17792 TIM54; mitochondrial import inner membrane translocase subunit TIM54
C TIM23 complex
D PFL1_03769 hypothetical protein K17794 TIM23; mitochondrial import inner membrane translocase subunit TIM23
D PFL1_03439 hypothetical protein K17795 TIM17; mitochondrial import inner membrane translocase subunit TIM17
D PFL1_04056 hypothetical protein K17496 TIM50; mitochondrial import inner membrane translocase subunit TIM50
C Mitochondrial calcium uniporter complex
D PFL1_01131 hypothetical protein K06125 COQ2; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C Other inner membrane factors
D PFL1_03854 hypothetical protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial
D PFL1_04989 hypothetical protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial
D PFL1_03109 hypothetical protein K22138 MPC1; mitochondrial pyruvate carrier 1
D PFL1_05551 hypothetical protein K22139 MPC2; mitochondrial pyruvate carrier 2
B Matrix
C MMC/PAM proteins
D PFL1_01354 hypothetical protein K17804 TIM44; mitochondrial import inner membrane translocase subunit TIM44
D PFL1_02892 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D PFL1_02285 hypothetical protein K03687 GRPE; molecular chaperone GrpE
D PFL1_03723 hypothetical protein K09539 DNAJC19; DnaJ homolog subfamily C member 19
D PFL1_02240 hypothetical protein K17805 PAM16; mitochondrial import inner membrane translocase subunit TIM16
D PFL1_06555 hypothetical protein K17806 PAM17; mitochondrial import inner membrane translocase subunit TIM23
C Other matrix factors
D PFL1_01986 hypothetical protein K01412 PMPCA; mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64]
D PFL1_06209 hypothetical protein K17732 PMPCB; mitochondrial-processing peptidase subunit beta [EC:3.4.24.64]
D PFL1_01578 hypothetical protein K01410 MIPEP; mitochondrial intermediate peptidase [EC:3.4.24.59]
D PFL1_02577 hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFL1_02576 hypothetical protein K04078 groES; chaperonin GroES
D PFL1_03707 hypothetical protein K03686 dnaJ; molecular chaperone DnaJ
D PFL1_05227 hypothetical protein K17807 TAM41; mitochondrial translocator assembly and maintenance protein 41
D PFL1_00245 hypothetical protein K17808 ZIM17; mitochondrial protein import protein ZIM17
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AMitochondrial quality control factors
B Regulator of mitochondrial biogenesis
C Ubiquitas transcription factors
D PFL1_03577 hypothetical protein K02355 fusA; elongation factor G
D PFL1_02687 hypothetical protein K02355 fusA; elongation factor G
C Nuclear respiratory factors
D PFL1_03812 hypothetical protein K14739 MT1_2; metallothionein 1/2
C Coactivators
C Proteins involved in Fe-S cluster biogenesis
D PFL1_04654 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFL1_04767 hypothetical protein K22068 ISCU; iron-sulfur cluster assembly enzyme ISCU, mitochondrial
D PFL1_01740 hypothetical protein K22069 LYRM4; LYR motif-containing protein 4
D PFL1_05750 hypothetical protein K19054 FXN; frataxin [EC:1.16.3.1]
D PFL1_02816 hypothetical protein K22071 FDX2; ferredoxin-2, mitochondrial
D PFL1_00914 hypothetical protein K18914 FDXR; adrenodoxin-NADP+ reductase [EC:1.18.1.6]
D PFL1_02892 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D PFL1_05184 hypothetical protein K04082 hscB; molecular chaperone HscB
D PFL1_01958 hypothetical protein K07390 grxD; monothiol glutaredoxin
D PFL1_02796 hypothetical protein K22063 ISCA1; iron-sulfur cluster assembly 1
D PFL1_05196 hypothetical protein K22072 ISCA2; iron-sulfur cluster assembly 2
D PFL1_00945 hypothetical protein K22073 IBA57; transferase CAF17, mitochondrial [EC:2.1.-.-]
D PFL1_06390 hypothetical protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D PFL1_02049 hypothetical protein K22066 BOLA1; BolA-like protein 1
D PFL1_04839 hypothetical protein K22075 BOLA3; BolA-like protein 3
D PFL1_02492 hypothetical protein K23503 SFXN5; sideroflexin-5
C Other regulator of mitochondrial biogenesis
D PFL1_00832 hypothetical protein K08675 PRSS15; ATP-dependent Lon protease [EC:3.4.21.53]
D PFL1_00508 hypothetical protein K18158 NCA2; nuclear control of ATPase protein 2
B Mitochondrial respiratory chain complex assembly factors
C Complex-I assembly factors
D PFL1_03532 hypothetical protein K18159 NDUFAF1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
D PFL1_02760 hypothetical protein K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
D PFL1_00644 hypothetical protein K09008 NDUFAF3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
D PFL1_00093 hypothetical protein K18163 NDUFAF6; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
D PFL1_01842 hypothetical protein K24726 NDUFAF8; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8
D PFL1_04597 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C Complex-II assembly factors
D PFL1_03481 hypothetical protein K18167 SDHAF1; succinate dehydrogenase assembly factor 1
D PFL1_00185 hypothetical protein K18168 SDHAF2; succinate dehydrogenase assembly factor 2
C Complex-III assembly factors
D PFL1_04409 hypothetical protein K08900 BCS1; mitochondrial chaperone BCS1
D PFL1_06072 hypothetical protein K08900 BCS1; mitochondrial chaperone BCS1
D PFL1_04397 hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
C Complex-IV assembly factors
D PFL1_01733 hypothetical protein K18171 CMC1; COX assembly mitochondrial protein 1
D PFL1_00336 hypothetical protein K18172 CMC2; COX assembly mitochondrial protein 2
D PFL1_00557 hypothetical protein K18173 COA1; cytochrome c oxidase assembly factor 1
D PFL1_02107 hypothetical protein K18176 COA3; cytochrome c oxidase assembly factor 3, fungi type
D PFL1_00084 hypothetical protein K18178 COA5; cytochrome c oxidase assembly factor 5
D PFL1_00140 hypothetical protein K18179 COA6; cytochrome c oxidase assembly factor 6
D PFL1_03359 hypothetical protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PFL1_04807 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PFL1_02460 hypothetical protein K18182 COX16; cytochrome c oxidase assembly protein subunit 16
D PFL1_00959 hypothetical protein K02260 COX17; cytochrome c oxidase assembly protein subunit 17
D PFL1_05023 hypothetical protein K17797 COX18; mitochondrial inner membrane protein COX18
D PFL1_01173 hypothetical protein K18183 COX19; cytochrome c oxidase assembly protein subunit 19
D PFL1_00186 hypothetical protein K18184 COX20; cytochrome c oxidase assembly protein subunit 20
D PFL1_05642 hypothetical protein K18185 COX23; cytochrome c oxidase assembly protein subunit 23
D PFL1_01853 hypothetical protein K17656 MSS51; mitochondrial splicing suppressor protein 51
D PFL1_03702 hypothetical protein K18187 PET100F; protein PET100, fungi type
D PFL1_04959 hypothetical protein K18188 PET117; protein PET117
D PFL1_01747 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFL1_02931 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D PFL1_06632 hypothetical protein K07152 SCO1; protein SCO1
C Complex-V assembly factors
D PFL1_06478 hypothetical protein K07555 ATPeAF1; ATP synthase mitochondrial F1 complex assembly factor 1
D PFL1_05808 hypothetical protein K07556 ATPeAF2; ATP synthase mitochondrial F1 complex assembly factor 2
D PFL1_06574 hypothetical protein K18192 ATP10; mitochondrial ATPase complex subunit ATP10
B Mitochondrial dynamics
C Fission and Fusion factors
D PFL1_06128 hypothetical protein K06030 MFN2; mitofusin 2 [EC:3.6.5.-]
D PFL1_04940 hypothetical protein K22140 MGM1; dynamin-like GTPase MGM1, mitochondrial
D PFL1_03825 hypothetical protein K17967 UGO1; mitochondrial fusion and transport protein UGO1
D PFL1_01690 hypothetical protein K23166 OPA3; optic atrophy 3 protein
D PFL1_04452 hypothetical protein K09650 PARL; rhomboid-like protein [EC:3.4.21.105]
D PFL1_05418 hypothetical protein K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
D PFL1_00719 hypothetical protein K17969 FIS1; mitochondrial fission 1 protein
D PFL1_02292 hypothetical protein K17970 MDV1; mitochondrial division protein 1
C Actin cytoskeleton organization
D PFL1_03777 hypothetical protein K17945 TPM1_2; tropomyosin, fungi type
D PFL1_03302 hypothetical protein K17972 NAA20; N-terminal acetyltransferase B complex catalytic subunit [EC:2.3.1.254]
D PFL1_02000 hypothetical protein K17973 NAA25; N-terminal acetyltransferase B complex non-catalytic subunit
C Mitochondrial movement
D PFL1_01224 hypothetical protein K17764 MMM1; maintenance of mitochondrial morphology protein 1
D PFL1_04069 hypothetical protein K17774 MDM10; mitochondrial distribution and morphology protein 10
D PFL1_02954 hypothetical protein K17775 MDM34; mitochondrial distribution and morphology protein 34
D PFL1_00550 hypothetical protein K17974 JSN1; protein JSN1
D PFL1_02289 hypothetical protein K17080 PHB1; prohibitin 1
D PFL1_01734 hypothetical protein K17081 PHB2; prohibitin 2
C Retention of mitochondria
D PFL1_05418 hypothetical protein K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
D PFL1_01416 hypothetical protein K10357 MYO5; myosin V
C Morphogenesis factors
D PFL1_05536 hypothetical protein K17887 SNX25; sorting nexin-25
D PFL1_04263 hypothetical protein K17979 MDM31; mitochondrial distribution and morphology protein 31
D PFL1_02117 hypothetical protein K07870 RHOT1; mitochondrial Rho GTPase 1 [EC:3.6.5.-]
D PFL1_00574 hypothetical protein K17785 IMMT; MICOS complex subunit MIC60
D PFL1_05449 hypothetical protein K17981 MTFP1; mitochondrial fission process protein 1
D PFL1_02465 hypothetical protein K17408 DAP3; small subunit ribosomal protein S29
D PFL1_00058 hypothetical protein K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26]
D PFL1_06004 hypothetical protein K17983 SHE9; sensitive to high expression protein 9, mitochondrial
B Mitophagy factors
C Autophagy-related proteins
D PFL1_04254 hypothetical protein K17906 ATG2; autophagy-related protein 2
D PFL1_00462 hypothetical protein K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3
D PFL1_03172 hypothetical protein K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-]
D PFL1_01656 hypothetical protein K08339 ATG5; autophagy-related protein 5
D PFL1_03309 hypothetical protein K08334 BECN; beclin
D PFL1_04299 hypothetical protein K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
D PFL1_05134 hypothetical protein K08341 GABARAP; GABA(A) receptor-associated protein
D PFL1_05637 hypothetical protein K17907 ATG9; autophagy-related protein 9
D PFL1_02769 hypothetical protein K17888 ATG10L; ubiquitin-like-conjugating enzyme ATG10
D PFL1_06548 hypothetical protein K08330 ATG11; autophagy-related protein 11
D PFL1_02497 hypothetical protein K08336 ATG12; ubiquitin-like protein ATG12
D PFL1_00391 hypothetical protein K17900 ATG15; lipase ATG15 [EC:3.1.1.3]
D PFL1_05160 hypothetical protein K17890 ATG16L1; autophagy-related protein 16-1
D PFL1_02770 hypothetical protein K17908 WIPI1_2; autophagy-related protein 18
D PFL1_02384 hypothetical protein K08332 VAC8; vacuolar protein 8
C Parkin-dependent mechanism factors
D PFL1_04452 hypothetical protein K09650 PARL; rhomboid-like protein [EC:3.4.21.105]
C Parkin-independent mechanism factors
D PFL1_03024 hypothetical protein K08331 ATG13; autophagy-related protein 13
D PFL1_04724 hypothetical protein K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1]
D PFL1_06571 hypothetical protein K04079 HSP90A; molecular chaperone HtpG
D PFL1_05195 hypothetical protein K09554 CDC37; cell division cycle protein 37
D PFL1_05899 hypothetical protein K17986 FUNDC1; FUN14 domain-containing protein 1
C Other mitophagy factors
D PFL1_06739 hypothetical protein K17987 NBR1; next to BRCA1 gene 1 protein
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 14, 2024