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  Transcription Machinery - Pseudomonas fluorescens SBW25

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AEukaryotic type B RNA polymerase II system C RNA polymerase II D Core subunits D Pol II specific subunits D Pol I, II, III common subunits D Pol IV and V specific subunits C Basal transcription factors D TFIIA D TFIIB D TFIID D TFIIE D TFIIF D TFIIH E PFLU_3138 Uncharacterized protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C Mediator complex D Head D Middle D Tail D CDK-module D Other mediators C Coactivators D SAGA/TFTC/STAGA complex D BAF/PBAF complex D SWI/SNF complex D RSC complex D Others C Other transcription-related factors D Transcription elongation factors D Transcription termination factor D PAF1 complex D NELF complex D Super elongation complex (SEC) D Little elongation complex (LEC) D Brd4/P-TEFb complex D BUR kinase complex D CTDK-I complex D 7SK RNP complex D DBIRD complex D Others B RNA polymerase III system C RNA polymerase III D Core subunits D Pol III specific subunits D Pol I, II, III common subunits C Basal transcription factors D TFIIIA D TFIIIB D TFIIIC D TFIIIC, fungi type C Other transcription-related factors D snRNA-activating protein complex (SNAPc) D Octamer transcription factors D Others B RNA polymerase I system C RNA polymerase I D Core subunits D Pol I specific subunits D Pol I, II, III common subunits C Basal transcription factors D SL1/TIF-1B C Other transcription-related factors D UBF D Transcription initiation factors D Transcription elongation factors D NoRC (nucleolar remodeling complex) D CTDK-I complex D Transcription termination factors D Others # AProkaryotic type B Bacterial type C RNA polymerase D Core subunits E PFLU_5502 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] E PFLU_5534 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] E PFLU_5533 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] E PFLU_5994 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Sigma factors E PFLU_5592 rpoD; RNA polymerase sigma factor (sigma-70) K03086 rpoD; RNA polymerase primary sigma factor E PFLU_1302 rpoS; RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor E PFLU_4802 Uncharacterized protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E PFLU_1467 algU; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E PFLU_4538 Putative putative ECF-family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E PFLU_4613 Putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E PFLU_2725 Putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E PFLU_3349 Putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E PFLU_0166 Putative sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E PFLU_3631 Putative RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E PFLU_1042 fecI; Probable RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E PFLU_5627 Putative RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E PFLU_3568 Putative RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E PFLU_2787 Heme uptake regulator K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E PFLU_3749 Putative RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E PFLU_6130 Putative iron-related RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E PFLU_5777 rpoH; RNA polymerase sigma factor RpoH (RNA polymerase sigma-32 factor) K03089 rpoH; RNA polymerase sigma-32 factor E PFLU_0882 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor E PFLU_4417 RNA polymerase sigma factor FliA (RNA polymerase sigma factor for flagellar operon) (Sigma F) (Sigma-28) K02405 fliA; RNA polymerase sigma factor FliA C Other transcription-related factors D RNA polymerase-associated proteins E PFLU_1352 rapA; RNA polymerase associated protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] E PFLU_5254 Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA E PFLU_5469 Transcription antitermination protein NusB (Antitermination factor NusB) K03625 nusB; transcription antitermination protein NusB E PFLU_5539 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG E PFLU_0844 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A E PFLU_0845 sspB; Stringent starvation protein B K03600 sspB; stringent starvation protein B E PFLU_3555 Histidine kinase (EC K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] E PFLU_1583 Putative response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] E PFLU_3554 Putative hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ E PFLU_1468 mucA; Sigma factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA E PFLU_1469 mucB; Sigma factor regulatory protein K03598 rseB; sigma-E factor negative regulatory protein RseB D Transcription elongation factors E PFLU_6086 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor E PFLU_2586 Putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor E PFLU_5233 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor E PFLU_5264 Transcription elongation factor GreA (Transcript cleavage factor GreA) K03624 greA; transcription elongation factor GreA E PFLU_1696 greB; Transcription elongation factor GreB (Transcript cleavage factor GreB) K04760 greB; transcription elongation factor GreB D Transcription termination factor E PFLU_5900 rho; Transcription termination factor Rho (EC (ATP-dependent helicase Rho) K03628 rho; transcription termination factor Rho B Archaeal type C RNA polymerase D Core subunits C Basal transcription factors D TFB D TFE D TFS ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024