+D GENES KO #

  KEGG Orthology (KO) - Candidatus Portiera aleyrodidarum TV-BCN

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:plb00010] D PTV_215 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PTV_169 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PTV_168 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00020 Citrate cycle (TCA cycle) [PATH:plb00020] D PTV_078 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PTV_077 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PTV_169 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PTV_168 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:plb00030] D PTV_216 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PTV_172 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PTV_233 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] C 00040 Pentose and glucuronate interconversions C 00051 Fructose and mannose metabolism C 00052 Galactose metabolism D PTV_215 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism D PTV_215 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:plb00520] D PTV_215 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00620 Pyruvate metabolism [PATH:plb00620] D PTV_169 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PTV_168 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PTV_041 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00650 Butanoate metabolism D PTV_099 ilvI; Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTV_098 ilvH; Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:plb00660] D PTV_099 ilvI; Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTV_098 ilvH; Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTV_044 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PTV_045 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PTV_046 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:plb00190] D PTV_279 nuoA; NADH-quinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D PTV_280 nuoB; NADH-quinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PTV_281 nuoC; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D PTV_282 nuoE; NADH-quinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D PTV_283 nuoF; NADH-quinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D PTV_284 nuoG; NADH-quinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D PTV_285 nuoH; NADH-quinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D PTV_286 nuoI; NADH-quinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PTV_287 nuoJ; NADH-quinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D PTV_288 nuoK; NADH-quinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D PTV_289 nuoL; NADH-quinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D PTV_290 nuoM; NADH-quinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D PTV_291 nuoN; NADH-quinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D PTV_152 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D PTV_153 cyoD; Cytochrome o ubiquinol oxidase protein CyoD K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D PTV_154 cyoC; Cytochrome o ubiquinol oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D PTV_155 cyoB; Ubiquinol oxidase subunit 1 K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D PTV_156 cyoA; Ubiquinol oxidase subunit 2 K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D PTV_262 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PTV_260 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PTV_261 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PTV_263 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PTV_259 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PTV_266 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PTV_264 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PTV_265 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism C 00910 Nitrogen metabolism C 00920 Sulfur metabolism B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis D PTV_038 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism C 00564 Glycerophospholipid metabolism D PTV_205 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism D PTV_233 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] C 00240 Pyrimidine metabolism [PATH:plb00240] D PTV_012 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PTV_013 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PTV_242 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:plb00250] D PTV_249 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PTV_294 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PTV_012 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PTV_013 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] C 00260 Glycine, serine and threonine metabolism [PATH:plb00260] D PTV_194 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTV_047 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PTV_093 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PTV_297 thrB; Homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D PTV_092 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PTV_277 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PTV_071 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PTV_072 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:plb00270] D PTV_028 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PTV_194 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTV_047 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PTV_093 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] C 00280 Valine, leucine and isoleucine degradation [PATH:plb00280] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:plb00290] D PTV_277 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PTV_044 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PTV_045 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PTV_046 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D PTV_099 ilvI; Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTV_098 ilvH; Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTV_097 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PTV_188 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PTV_041 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:plb00300] D PTV_093 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PTV_194 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTV_047 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PTV_170 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PTV_014 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D PTV_019 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D PTV_068 argD; Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PTV_018 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PTV_292 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PTV_293 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00310 Lysine degradation [PATH:plb00310] D PTV_077 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:plb00220] D PTV_258 arcB; Ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PTV_249 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PTV_294 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PTV_068 argD; Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism C 00340 Histidine metabolism [PATH:plb00340] D PTV_225 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PTV_184 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D PTV_056 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D PTV_300 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PTV_301 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PTV_299 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PTV_302 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D PTV_298 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00350 Tyrosine metabolism D PTV_298 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism D PTV_298 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D PTV_077 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:plb00400] D PTV_027 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PTV_033 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PTV_220 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D PTV_213 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PTV_032 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D PTV_253 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PTV_043 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PTV_240 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PTV_239 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PTV_238 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D PTV_049 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D PTV_237 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D PTV_071 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PTV_072 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PTV_254 pheA; P-protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D PTV_298 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:plb00450] D PTV_028 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PTV_180 sufS; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] C 00460 Cyanoamino acid metabolism C 00470 D-Amino acid metabolism [PATH:plb00470] D PTV_292 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PTV_293 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:plb00480] D PTV_172 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PTV_216 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism C 00740 Riboflavin metabolism C 00750 Vitamin B6 metabolism D PTV_092 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism C 00770 Pantothenate and CoA biosynthesis [PATH:plb00770] D PTV_099 ilvI; Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTV_098 ilvH; Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTV_097 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PTV_188 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] C 00780 Biotin metabolism C 00785 Lipoic acid metabolism [PATH:plb00785] D PTV_198 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D PTV_197 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PTV_169 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PTV_168 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PTV_078 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PTV_077 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis C 00670 One carbon pool by folate D PTV_218 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:plb00860] D PTV_079 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PTV_152 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:plb00906] D PTV_230 crtB; Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D PTV_229 crtI; Phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D PTV_231 crtY; Lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:plb00261] D PTV_194 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTV_047 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PTV_170 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PTV_014 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis D PTV_215 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D PTV_215 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D PTV_298 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D PTV_240 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PTV_239 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D PTV_038 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D PTV_213 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:plb03020] D PTV_142 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PTV_141 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PTV_111 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:plb03010] D PTV_252 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PTV_021 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PTV_129 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PTV_112 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PTV_118 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PTV_164 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PTV_139 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PTV_121 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PTV_223 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PTV_136 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PTV_113 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PTV_140 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PTV_114 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PTV_122 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PTV_004 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PTV_096 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PTV_126 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PTV_163 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PTV_131 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PTV_105 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PTV_158 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PTV_132 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PTV_135 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PTV_134 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PTV_123 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PTV_120 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PTV_143 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PTV_162 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PTV_144 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PTV_145 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PTV_224 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PTV_125 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PTV_117 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PTV_128 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PTV_110 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PTV_119 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PTV_094 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PTV_061 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PTV_108 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PTV_130 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PTV_133 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PTV_124 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PTV_234 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D PTV_107 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PTV_087 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PTV_127 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PTV_031 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PTV_037 rmpF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PTV_086 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PTV_271 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PTV_062 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PTV_115 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PTV_084 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTV_082 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PTV_081 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:plb00970] D PTV_017 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTV_247 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTV_192 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTV_257 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTV_209 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTV_236 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PTV_165 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PTV_246 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PTV_304 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PTV_177 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PTV_150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTV_176 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTV_208 tRNA-His K14226 tRNA-His; tRNA His D PTV_083 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PTV_009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTV_052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTV_245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTV_241 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PTV_274 tRNA-Ile K14230 tRNA-Met; tRNA Met D PTV_008 tRNA-Met K14230 tRNA-Met; tRNA Met D PTV_235 tRNA-Met K14230 tRNA-Met; tRNA Met D PTV_303 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PTV_210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PTV_200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTV_193 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTV_199 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTV_173 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTV_149 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTV_295 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTV_305 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTV_148 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PTV_151 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PTV_167 tRNA-Val K14237 tRNA-Val; tRNA Val D PTV_243 tRNA-Val K14237 tRNA-Val; tRNA Val D PTV_079 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PTV_227 gatA; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PTV_228 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PTV_212 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PTV_195 alaXp; Alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTV_203 aspC; aspartate---tRNAAsn ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PTV_276 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PTV_275 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PTV_051 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PTV_211 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PTV_069 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PTV_074 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PTV_104 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PTV_090 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PTV_064 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PTV_190 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PTV_060 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PTV_059 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PTV_016 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PTV_085 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:plb03060] D PTV_116 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PTV_147 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PTV_269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PTV_256 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PTV_066 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PTV_103 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:plb04122] D PTV_053 tusE; Sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D PTV_179 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:plb03018] D PTV_035 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D PTV_003 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PTV_080 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PTV_026 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho D PTV_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PTV_251 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:plb03030] D PTV_058 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PTV_024 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTV_171 dnaX; DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTV_039 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTV_075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTV_272 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTV_161 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PTV_109 ssb; Single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein C 03410 Base excision repair C 03420 Nucleotide excision repair C 03430 Mismatch repair [PATH:plb03430] D PTV_196 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PTV_186 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D PTV_109 ssb; Single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PTV_024 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTV_272 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTV_171 dnaX; DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTV_075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTV_039 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTV_058 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03440 Homologous recombination [PATH:plb03440] D PTV_109 ssb; Single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PTV_202 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PTV_024 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTV_272 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTV_171 dnaX; DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTV_075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTV_039 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTV_058 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:plb03070] D PTV_147 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PTV_116 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PTV_269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PTV_256 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:plb02020] D PTV_040 mucD; Serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:plb02024] D PTV_240 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PTV_239 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PTV_027 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PTV_269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PTV_147 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PTV_116 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PTV_256 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D PTV_157 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance D PTV_040 mucD; Serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:plb01000] C 01001 Protein kinases C 01009 Protein phosphatases and associated proteins C 01002 Peptidases and inhibitors [BR:plb01002] D PTV_103 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D PTV_018 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PTV_020 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PTV_010 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PTV_040 mucD; Serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D PTV_207 clpP; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PTV_189 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PTV_066 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PTV_057 sohB; Putative protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D PTV_030 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] C 01003 Glycosyltransferases C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins C 01004 Lipid biosynthesis proteins C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:plb01006] D PTV_230 crtB; Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D PTV_152 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:plb01007] D PTV_079 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PTV_212 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PTV_016 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PTV_085 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PTV_211 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PTV_104 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PTV_069 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PTV_074 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PTV_090 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PTV_203 aspC; aspartate---tRNAAsn ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PTV_190 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PTV_276 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PTV_275 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PTV_051 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PTV_064 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PTV_195 alaXp; Alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTV_060 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PTV_059 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PTV_298 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PTV_068 argD; Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:plb00194] D PTV_259 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PTV_260 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PTV_261 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PTV_262 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PTV_263 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PTV_264 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PTV_265 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PTV_266 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:plb03000] C 03021 Transcription machinery [BR:plb03021] D PTV_111 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PTV_142 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PTV_141 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PTV_157 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D PTV_088 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D PTV_007 nusA; Transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA D PTV_146 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PTV_011 greA; greA K03624 greA; transcription elongation factor GreA D PTV_026 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:plb03019] D PTV_035 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D PTV_080 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PTV_003 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PTV_026 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho D PTV_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PTV_251 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] C 03041 Spliceosome C 03011 Ribosome [BR:plb03011] D PTV_252 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PTV_021 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PTV_129 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PTV_112 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PTV_118 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PTV_164 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PTV_139 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PTV_121 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PTV_223 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PTV_136 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PTV_113 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PTV_140 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PTV_114 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PTV_122 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PTV_004 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PTV_096 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PTV_126 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PTV_163 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PTV_131 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PTV_105 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PTV_158 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PTV_132 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PTV_135 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PTV_134 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PTV_123 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PTV_120 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PTV_162 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PTV_144 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PTV_145 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PTV_143 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PTV_224 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PTV_125 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PTV_117 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PTV_128 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PTV_110 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PTV_119 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PTV_094 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PTV_061 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PTV_108 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PTV_130 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PTV_133 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PTV_124 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PTV_107 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PTV_087 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PTV_127 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PTV_031 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PTV_037 rmpF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PTV_086 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PTV_271 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PTV_062 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PTV_115 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PTV_234 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D PTV_081 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PTV_084 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTV_082 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:plb03009] D PTV_065 era; GTPase Era K03595 era; GTPase D PTV_106 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D PTV_007 nusA; Transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA D PTV_146 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PTV_160 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PTV_089 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D PTV_221 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PTV_036 rluC_rpmF; Fused ribosomal large subunit pseudouridine synthase C and 50S ribosomal protein L32 K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D PTV_102 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PTV_095 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D PTV_035 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D PTV_080 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PTV_191 der; GTPase Der K03977 engA; GTPase D PTV_005 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D PTV_073 ybeY; rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor C 03016 Transfer RNA biogenesis [BR:plb03016] D PTV_079 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PTV_064 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PTV_104 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PTV_074 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PTV_212 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PTV_090 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PTV_203 aspC; aspartate---tRNAAsn ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PTV_195 alaXp; Alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTV_051 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PTV_211 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PTV_069 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PTV_190 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PTV_060 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PTV_059 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PTV_016 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PTV_085 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PTV_048 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PTV_268 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D PTV_267 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PTV_270 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D PTV_222 rnpB; Bacterial RNase P class A, RNA component K01978 rnpB; M1 RNA D PTV_276 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PTV_275 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PTV_179 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PTV_053 tusE; Sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D PTV_025 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D PTV_166 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D PTV_003 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:plb03012] D PTV_006 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PTV_063 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PTV_022 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D PTV_137 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D PTV_138 fusA; Elongation factor G K02355 fusA; elongation factor G D PTV_232 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D PTV_023 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor D PTV_178 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D PTV_091 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:plb03110] D PTV_101 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PTV_206 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PTV_029 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D PTV_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PTV_251 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PTV_002 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D PTV_308 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE D PTV_250 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES D PTV_040 mucD; Serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D PTV_010 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PTV_266 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PTV_248 grxD; Glutaredoxin-4 K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:plb03032] D PTV_161 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PTV_109 ssb; Single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PTV_024 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTV_272 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTV_075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTV_039 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTV_058 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PTV_171 dnaX; DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTV_255 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PTV_273 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] C 03036 Chromosome and associated proteins [BR:plb03036] D PTV_267 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PTV_244 ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:plb03400] D PTV_142 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PTV_141 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PTV_111 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PTV_196 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PTV_186 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D PTV_024 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTV_272 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTV_075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTV_039 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTV_058 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PTV_171 dnaX; DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTV_109 ssb; Single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PTV_202 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PTV_255 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PTV_273 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] C 03029 Mitochondrial biogenesis [BR:plb03029] D PTV_006 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PTV_063 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PTV_022 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D PTV_137 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D PTV_138 fusA; Elongation factor G K02355 fusA; elongation factor G D PTV_065 era; GTPase Era K03595 era; GTPase D PTV_016 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PTV_074 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PTV_203 aspC; aspartate---tRNAAsn ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PTV_227 gatA; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PTV_228 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PTV_109 ssb; Single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PTV_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PTV_308 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE D PTV_251 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PTV_250 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES D PTV_002 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D PTV_248 grxD; Glutaredoxin-4 K07390 grxD; monothiol glutaredoxin D PTV_244 ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D PTV_152 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D PTV_269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:plb02000] D PTV_174 yadH; Inner membrane transport permease YadH K01992 ABC-2.P; ABC-2 type transport system permease protein D PTV_175 yadG; ABC transporter ATP-binding protein YadG K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PTV_182 sufC; Probable ATP-dependent transporter SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D PTV_217 galP; Galactose transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D PTV_204 mgtE; Magnesium transporter MgtE K06213 mgtE; magnesium transporter D PTV_219 gltP; Proton glutamate symport protein K11102 gltP; proton glutamate symport protein D PTV_050 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO D PTV_100 marC; Inner membrane protein MarC K05595 marC; multiple antibiotic resistance protein D PTV_201 Peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein C 02044 Secretion system [BR:plb02044] D PTV_015 YGGT family protein K02221 yggT; YggT family protein D PTV_256 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PTV_147 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PTV_116 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PTV_269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins C 04147 Exosome [BR:plb04147] D PTV_251 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PTV_001 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PTV_137 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu D PTV_294 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PTV_249 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PTV_076 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PTV_216 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] C 02048 Prokaryotic defense system [BR:plb02048] D PTV_079 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:plb03100] D PTV_017 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTV_247 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTV_192 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTV_257 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTV_209 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTV_236 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PTV_165 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PTV_246 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PTV_304 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PTV_177 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PTV_150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTV_176 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTV_208 tRNA-His K14226 tRNA-His; tRNA His D PTV_083 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PTV_009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTV_052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTV_245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTV_241 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PTV_274 tRNA-Ile K14230 tRNA-Met; tRNA Met D PTV_008 tRNA-Met K14230 tRNA-Met; tRNA Met D PTV_235 tRNA-Met K14230 tRNA-Met; tRNA Met D PTV_303 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PTV_210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PTV_200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTV_193 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTV_199 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTV_173 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTV_149 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTV_295 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTV_305 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTV_148 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PTV_151 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PTV_167 tRNA-Val K14237 tRNA-Val; tRNA Val D PTV_243 tRNA-Val K14237 tRNA-Val; tRNA Val D PTV_084 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTV_082 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PTV_081 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PTV_222 rnpB; Bacterial RNase P class A, RNA component K01978 rnpB; M1 RNA D PTV_306 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PTV_278 fpr; Ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D PTV_214 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] C 99981 Carbohydrate metabolism C 99982 Energy metabolism C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D PTV_042 cspB; Cold shock protein CspB K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D PTV_307 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D PTV_054 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA C 99976 Replication and repair C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins C 99992 Structural proteins C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D PTV_183 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D PTV_181 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D PTV_055 sufE; Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE C 99997 Function unknown ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 14, 2024