+D GENES KO #

  KEGG Orthology (KO) - Pandoraea pnomenusa DSM 16536

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ppnm00010] D LV28_20410 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2] D LV28_03465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LV28_06630 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LV28_07675 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LV28_23645 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LV28_11060 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LV28_07685 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LV28_16775 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LV28_18480 hypothetical protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LV28_23525 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LV28_07680 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LV28_01060 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LV28_24410 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LV28_10350 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LV28_24415 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_01410 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LV28_10220 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LV28_02220 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LV28_11970 lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LV28_22785 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_11965 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D LV28_21985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04145 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_18855 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04860 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_11245 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LV28_10515 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LV28_15005 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:ppnm00020] D LV28_23910 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D LV28_01780 excisionase K01647 CS; citrate synthase [EC:2.3.3.1] D LV28_21540 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D LV28_23865 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D LV28_04935 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D LV28_06315 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D LV28_08980 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D LV28_04085 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D LV28_04080 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_10605 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D LV28_10610 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D LV28_05380 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D LV28_23895 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D LV28_23900 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D LV28_23885 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LV28_23890 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LV28_18840 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D LV28_14255 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LV28_23875 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LV28_15005 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D LV28_24410 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LV28_10350 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LV28_24415 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ppnm00030] D LV28_03465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LV28_20400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LV28_20405 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D LV28_11610 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LV28_11065 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D LV28_00445 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D LV28_00450 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D LV28_10515 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LV28_17230 ribose-phosphate pyrophosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D LV28_02200 hypothetical protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LV28_17040 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LV28_20395 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D LV28_18520 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D LV28_18525 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D LV28_06185 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D LV28_22780 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D LV28_22775 gluconate 2-dehydrogenase K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D LV28_18510 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D LV28_09965 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D LV28_18535 gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D LV28_03860 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D LV28_07675 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LV28_06630 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:ppnm00040] D LV28_20910 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D LV28_05690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LV28_11610 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LV28_09635 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D LV28_02460 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] D LV28_21685 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] D LV28_01940 class II aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:ppnm00051] D LV28_20150 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LV28_10515 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LV28_01940 class II aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D LV28_00345 NAD(P)-dependent oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D LV28_02755 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D LV28_06630 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LV28_07675 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LV28_23645 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LV28_16750 PTS sugar transporter subunit IIB K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:ppnm00052] D LV28_11245 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LV28_12115 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LV28_11935 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LV28_05690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LV28_10515 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LV28_20410 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism [PATH:ppnm00053] D LV28_20910 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_04550 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D LV28_09675 glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D LV28_09635 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D LV28_09630 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D LV28_20615 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] D LV28_12655 NAD-dependent dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:ppnm00500] D LV28_05690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LV28_17860 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D LV28_03050 cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D LV28_03320 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D LV28_03315 hypothetical protein K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D LV28_06180 treF; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D LV28_10515 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LV28_20410 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2] D LV28_03465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LV28_20150 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppnm00520] D LV28_09790 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D LV28_20150 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LV28_15910 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_22525 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_11930 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_06125 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D LV28_15905 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LV28_18455 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D LV28_22925 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D LV28_10955 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D LV28_10960 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D LV28_12560 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LV28_10130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LV28_09100 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LV28_13505 UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D LV28_00715 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D LV28_00705 chitin deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D LV28_20410 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2] D LV28_10515 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LV28_05690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LV28_20910 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D LV28_12115 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LV28_11935 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LV28_16750 PTS sugar transporter subunit IIB K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LV28_03465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LV28_02450 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D LV28_08785 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:ppnm00620] D LV28_21985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04145 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_18855 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04860 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_24410 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LV28_10350 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LV28_24415 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_21845 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D LV28_02220 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LV28_11970 lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LV28_10220 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LV28_22785 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D LV28_17930 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LV28_07680 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LV28_24080 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LV28_11200 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LV28_11205 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LV28_12100 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LV28_23970 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LV28_03305 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D LV28_11865 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_11965 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D LV28_05380 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D LV28_07290 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D LV28_01410 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LV28_09365 2-hydroxy-acid oxidase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D LV28_10920 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D LV28_06275 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D LV28_13635 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D LV28_16280 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D LV28_05485 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D LV28_18510 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D LV28_09965 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D LV28_08720 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D LV28_11105 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D LV28_13275 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D LV28_23875 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LV28_18840 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D LV28_14255 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LV28_21145 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LV28_15005 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D LV28_01060 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LV28_14735 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D LV28_00835 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17775 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D LV28_04595 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppnm00630] D LV28_00815 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D LV28_21985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04145 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_18855 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04860 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_14735 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D LV28_00835 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D LV28_23875 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LV28_23910 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D LV28_01780 excisionase K01647 CS; citrate synthase [EC:2.3.3.1] D LV28_21540 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D LV28_23865 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D LV28_04935 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03875 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D LV28_03000 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D LV28_10015 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D LV28_09370 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D LV28_10020 glcE; glycolate oxidase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D LV28_09380 glcE; glycolate oxidase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D LV28_10025 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D LV28_15985 catalase K03781 katE; catalase [EC:1.11.1.6] D LV28_18770 catalase K03781 katE; catalase [EC:1.11.1.6] D LV28_11340 catalase K03781 katE; catalase [EC:1.11.1.6] D LV28_16280 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D LV28_05485 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D LV28_18510 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D LV28_09965 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D LV28_09915 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D LV28_11615 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D LV28_07160 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D LV28_00285 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LV28_06820 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LV28_13735 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D LV28_13745 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_13740 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D LV28_00635 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D LV28_00630 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D LV28_00625 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D LV28_20685 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D LV28_05245 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LV28_17870 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D LV28_18525 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D LV28_17740 formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9] D LV28_22155 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D LV28_01370 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D LV28_01360 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D LV28_22335 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D LV28_22330 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D LV28_22160 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D LV28_22165 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D LV28_22340 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D LV28_01355 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D LV28_22170 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D LV28_22345 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D LV28_01350 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D LV28_02295 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D LV28_06720 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D LV28_24945 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9] D LV28_07445 kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D LV28_17245 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D LV28_22195 oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] C 00640 Propanoate metabolism [PATH:ppnm00640] D LV28_21985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04145 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_18855 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04860 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_06265 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D LV28_17930 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_01525 NADPH:quinone dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_24080 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LV28_11200 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LV28_11205 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LV28_12100 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LV28_23970 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LV28_20810 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D LV28_21680 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LV28_15825 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D LV28_10610 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D LV28_10605 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D LV28_15830 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_10295 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_14245 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_05265 citrate synthase/methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D LV28_05250 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D LV28_05260 Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D LV28_05255 3-methylitaconate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D LV28_04935 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D LV28_05270 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D LV28_01410 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LV28_08385 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:ppnm00650] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16230 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LV28_23785 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LV28_03385 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LV28_18350 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_22275 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_07365 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D LV28_21845 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D LV28_02990 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D LV28_03885 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D LV28_23325 esterase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D LV28_03875 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D LV28_03000 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D LV28_17870 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D LV28_21870 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D LV28_05855 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D LV28_23895 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D LV28_23900 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D LV28_23885 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LV28_23890 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LV28_21680 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LV28_07180 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_18085 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_05455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_20245 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_05380 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D LV28_18090 4-hydroxybutyrate dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D LV28_16275 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D LV28_04440 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D LV28_04435 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D LV28_04430 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D LV28_21485 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D LV28_11840 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D LV28_02205 alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D LV28_21655 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_20510 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_03275 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_04625 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_04620 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ppnm00660] D LV28_21655 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_20510 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_03275 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_04625 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_04620 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LV28_02565 CoA-transferase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22] D LV28_10610 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D LV28_10605 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D LV28_01985 dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D LV28_15585 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D LV28_06615 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D LV28_23915 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D LV28_05770 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D LV28_23925 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D LV28_05765 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D LV28_23930 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ppnm00562] D LV28_24035 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LV28_17830 hypothetical protein K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D LV28_15830 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_10295 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_14245 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_23645 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ppnm00190] D LV28_23660 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D LV28_23665 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D LV28_23670 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D LV28_23675 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D LV28_23680 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D LV28_23685 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D LV28_23690 NADH dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D LV28_23695 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D LV28_23700 NADH dehydrogenase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D LV28_23705 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D LV28_23710 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D LV28_23715 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D LV28_23720 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D LV28_22580 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D LV28_23725 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D LV28_14645 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D LV28_05640 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D LV28_23895 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D LV28_23900 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D LV28_23885 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D LV28_23890 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D LV28_12455 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D LV28_12450 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D LV28_12445 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D LV28_16925 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D LV28_21605 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D LV28_19815 cytochrome C oxidase subunit III K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D LV28_06940 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D LV28_13420 cytochrome C oxidase subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9] D LV28_16900 MFS transporter K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D LV28_13430 hypothetical protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D LV28_13425 bb3-type cytochrome oxidase subunit IV K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D LV28_16880 cytochrome oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D LV28_13435 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D LV28_16875 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D LV28_16890 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D LV28_16920 cytochrome C oxidase subunit I K02259 COX15; heme a synthase [EC:1.17.99.9] D LV28_21600 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D LV28_19820 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D LV28_06945 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D LV28_19825 cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D LV28_06950 cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D LV28_21595 cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D LV28_19830 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D LV28_06955 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D LV28_05165 hypothetical protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LV28_16945 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LV28_05170 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LV28_16940 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LV28_20765 hypothetical protein K08738 CYC; cytochrome c D LV28_09460 cytochrome C K08738 CYC; cytochrome c D LV28_13560 cytochrome C K08738 CYC; cytochrome c D LV28_14120 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LV28_14110 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LV28_14115 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LV28_14125 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LV28_01415 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LV28_14105 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LV28_14140 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LV28_14130 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LV28_14135 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LV28_01880 pirin K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D LV28_21230 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D LV28_06085 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D LV28_08755 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ppnm00680] D LV28_10220 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LV28_00205 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D LV28_17740 formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9] D LV28_01360 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D LV28_22335 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D LV28_22330 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D LV28_22160 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D LV28_22165 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D LV28_22340 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D LV28_01355 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D LV28_22170 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D LV28_22345 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D LV28_01350 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D LV28_22155 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D LV28_01370 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D LV28_06820 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LV28_07160 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D LV28_23525 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LV28_21145 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LV28_23875 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LV28_07675 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LV28_06630 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LV28_17930 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LV28_21985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04145 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_18855 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04860 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_01060 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D LV28_16775 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LV28_18480 hypothetical protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LV28_15000 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D LV28_20855 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D LV28_03835 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ppnm00910] D LV28_05150 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LV28_02495 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LV28_02520 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LV28_02515 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LV28_02505 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LV28_08120 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D LV28_08130 nitrite reductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D LV28_08125 nitrite reductase K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D LV28_21690 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D LV28_16245 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D LV28_01535 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D LV28_06385 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D LV28_18380 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D LV28_00285 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LV28_12670 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D LV28_12665 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D LV28_02010 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D LV28_16385 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ppnm00920] D LV28_00595 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D LV28_00600 sulfate transporter K02046 cysU; sulfate/thiosulfate transport system permease protein D LV28_00605 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D LV28_18000 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LV28_02655 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LV28_17990 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D LV28_02660 ABC transporter permease K15552 tauC; taurine transport system permease protein D LV28_17995 nitrate ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D LV28_23095 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_13795 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_24250 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_09255 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_13785 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_09250 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_24265 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_09245 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_24255 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_13790 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_20715 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D LV28_20710 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D LV28_20705 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D LV28_13695 oxidase K05301 sorA; sulfite dehydrogenase (cytochrome) subunit A [EC:1.8.2.1] D LV28_13700 hypothetical protein K00386 sorB; sulfite dehydrogenase (cytochrome) subunit B [EC:1.8.2.1] D LV28_13545 sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D LV28_13540 sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D LV28_13555 thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D LV28_13550 thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D LV28_13530 bifunctional metallophosphatase/5'-nucleotidase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D LV28_13570 sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC D LV28_13565 cytochrome C K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D LV28_03310 hypothetical protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D LV28_04090 sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D LV28_04095 sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D LV28_04210 nitrite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D LV28_01275 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D LV28_13585 flavocytochrome C K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D LV28_13590 hypothetical protein K17230 fccA; cytochrome subunit of sulfide dehydrogenase D LV28_01855 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D LV28_05625 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D LV28_24045 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LV28_02550 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LV28_15630 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D LV28_24000 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D LV28_03410 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D LV28_20970 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D LV28_18345 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D LV28_02900 enoyl-CoA hydratase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ppnm00061] D LV28_24080 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D LV28_11200 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D LV28_11205 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LV28_12100 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D LV28_23970 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D LV28_09860 acyl carrier protein K02078 acpP; acyl carrier protein D LV28_13450 acyl carrier protein K02078 acpP; acyl carrier protein D LV28_09870 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LV28_09875 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LV28_13455 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LV28_13445 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LV28_09855 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LV28_08390 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_03530 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_00355 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_21185 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_12065 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_09480 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_09865 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_08965 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_05315 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_01030 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LV28_07365 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D LV28_07335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_05050 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_03545 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_11995 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_09120 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ppnm00071] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_12020 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_18355 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_03385 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LV28_18350 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LV28_23765 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D LV28_06225 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D LV28_03525 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D LV28_07465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D LV28_07335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_05050 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_03545 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_11995 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_09120 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_03030 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D LV28_10220 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LV28_02220 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LV28_11970 lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ppnm00561] D LV28_05245 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_05225 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D LV28_09880 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LV28_09110 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LV28_10550 glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LV28_10910 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:ppnm00564] D LV28_16795 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D LV28_05230 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D LV28_09110 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LV28_10550 glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LV28_10910 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LV28_08465 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D LV28_22505 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D LV28_01000 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D LV28_04605 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D LV28_21855 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D LV28_04610 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D LV28_02590 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D LV28_11115 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D LV28_03085 HAD family hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D LV28_00895 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D LV28_18335 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D LV28_13155 phospholipase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] D LV28_09765 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:ppnm00592] D LV28_12020 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_18355 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:ppnm01040] D LV28_08870 aminotransferase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D LV28_03475 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D LV28_18365 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ppnm00230] D LV28_23735 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LV28_10515 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LV28_02200 hypothetical protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LV28_17040 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LV28_23995 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D LV28_08415 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D LV28_08885 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D LV28_00155 phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D LV28_03445 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D LV28_09200 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D LV28_07650 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D LV28_07655 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D LV28_07660 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D LV28_18715 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LV28_10985 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LV28_17135 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D LV28_18230 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D LV28_24270 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LV28_09085 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D LV28_03895 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D LV28_11280 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LV28_01095 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LV28_24305 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LV28_04850 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D LV28_06540 FAD-binding molybdopterin dehydrogenase K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D LV28_06545 aldehyde oxidase K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D LV28_01105 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LV28_06565 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D LV28_04835 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LV28_11250 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LV28_02085 ribonucleotide reductase-like protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LV28_11240 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LV28_12700 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D LV28_04825 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LV28_06080 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D LV28_04415 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D LV28_02280 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LV28_24375 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LV28_16830 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LV28_11225 sugar kinase K00856 ADK; adenosine kinase [EC:2.7.1.20] D LV28_20425 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D LV28_06555 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D LV28_09045 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LV28_06660 metallophosphatase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D LV28_01300 hypothetical protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D LV28_20715 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D LV28_20710 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D LV28_07945 FAD-dependent oxidoreductase K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D LV28_01205 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D LV28_01160 OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D LV28_21880 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D LV28_01155 allantoinase K16842 hpxB; allantoinase [EC:3.5.2.5] D LV28_06195 allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D LV28_01165 allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D LV28_02800 (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D LV28_06200 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D LV28_01170 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D LV28_15740 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D LV28_15745 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D LV28_15755 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D LV28_10370 gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D LV28_19265 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D LV28_02810 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:ppnm00240] D LV28_06160 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LV28_06170 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LV28_06625 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LV28_10560 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LV28_18410 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D LV28_10555 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D LV28_22740 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D LV28_22745 oxidoreductase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D LV28_24485 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D LV28_13285 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D LV28_11130 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D LV28_00985 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D LV28_24305 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LV28_08470 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D LV28_23515 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D LV28_20880 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D LV28_18230 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D LV28_24270 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LV28_09085 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D LV28_08395 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D LV28_02820 N-acyl-D-amino-acid deacylase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D LV28_21120 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D LV28_11250 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LV28_02085 ribonucleotide reductase-like protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LV28_11240 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LV28_03345 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D LV28_08920 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LV28_02195 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D LV28_23070 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LV28_21875 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D LV28_18145 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D LV28_04995 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_14905 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_22735 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_17415 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_05750 cysteine hydrolase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110] D LV28_23305 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppnm00250] D LV28_08855 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D LV28_06415 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D LV28_18150 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D LV28_00620 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LV28_22015 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D LV28_22125 aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12] D LV28_00740 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D LV28_07160 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D LV28_22935 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D LV28_16050 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LV28_18070 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LV28_21135 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LV28_02280 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LV28_24375 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LV28_16830 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LV28_18715 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LV28_06625 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LV28_10560 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LV28_21680 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LV28_07180 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_18085 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_05455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_20245 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_12670 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D LV28_12665 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D LV28_06385 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D LV28_18380 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D LV28_13705 putA; transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D LV28_00285 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LV28_06160 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LV28_06170 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LV28_15910 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_22525 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_11930 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_23995 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ppnm00260] D LV28_24090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LV28_23935 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LV28_00745 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D LV28_05670 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D LV28_00750 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D LV28_16845 hypothetical protein K01733 thrC; threonine synthase [EC:4.2.3.1] D LV28_05710 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D LV28_17400 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D LV28_06820 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LV28_07160 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D LV28_16280 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D LV28_05485 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D LV28_18510 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D LV28_09965 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D LV28_05245 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LV28_16775 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LV28_18480 hypothetical protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LV28_15000 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D LV28_20855 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D LV28_03835 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D LV28_10755 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D LV28_04920 hypothetical protein K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D LV28_13735 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D LV28_13745 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_13740 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D LV28_16850 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D LV28_04605 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D LV28_05895 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D LV28_18445 methionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D LV28_13730 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LV28_03810 pyridoxal-5'-phosphate-dependent protein subunit beta K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D LV28_18235 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D LV28_22535 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D LV28_18190 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D LV28_23965 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D LV28_23955 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D LV28_05480 N-alpha-acetyl diaminobutyric acid deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D LV28_05465 hypothetical protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D LV28_05470 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:ppnm00270] D LV28_24045 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LV28_02550 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LV28_18445 methionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D LV28_03850 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LV28_14630 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LV28_16465 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D LV28_01715 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D LV28_06590 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D LV28_15405 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D LV28_11070 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D LV28_07225 hypothetical protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D LV28_18545 S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D LV28_03895 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D LV28_21310 hypothetical protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D LV28_14530 hypothetical protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D LV28_13010 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_23330 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_12180 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_24550 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_15670 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D LV28_24090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LV28_23935 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LV28_00745 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D LV28_15630 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D LV28_04490 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D LV28_14680 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D LV28_24000 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D LV28_17465 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LV28_04135 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LV28_16735 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LV28_16745 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D LV28_01855 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D LV28_05625 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D LV28_01410 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LV28_22125 aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12] D LV28_23875 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D LV28_13730 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LV28_20930 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D LV28_15000 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D LV28_20855 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ppnm00280] D LV28_17465 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_23765 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D LV28_06225 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D LV28_16395 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_12020 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_18355 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_10290 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D LV28_06790 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D LV28_22645 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D LV28_15830 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_10295 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_14245 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_20820 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-] D LV28_15825 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D LV28_16330 3-methylcrotonyl-CoA carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D LV28_16360 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D LV28_16355 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D LV28_16275 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D LV28_04440 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D LV28_04435 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppnm00290] D LV28_03810 pyridoxal-5'-phosphate-dependent protein subunit beta K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D LV28_18235 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D LV28_06615 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D LV28_23915 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D LV28_05770 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D LV28_23925 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D LV28_05765 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D LV28_23930 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D LV28_21655 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_20510 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_03275 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_04625 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_04620 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LV28_04615 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D LV28_20770 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D LV28_20775 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D LV28_05320 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D LV28_17465 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LV28_00740 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D LV28_17775 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D LV28_04595 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ppnm00300] D LV28_00745 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D LV28_24090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LV28_23935 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LV28_20385 hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LV28_23585 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LV28_21215 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LV28_02950 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LV28_11040 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D LV28_00915 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D LV28_08790 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D LV28_00920 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D LV28_00905 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LV28_15415 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LV28_12745 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D LV28_23220 2-aminoadipate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D LV28_11475 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LV28_11470 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ppnm00310] D LV28_17445 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D LV28_04080 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_07465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_07180 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_18085 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_05455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_20245 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_05735 CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D LV28_02890 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D LV28_16615 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D LV28_02480 amino acid dehydrogenase K26064 amaD; D-lysine oxidase D LV28_14325 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:ppnm00220] D LV28_09080 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D LV28_25530 hypothetical protein K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9] D LV28_16050 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LV28_18070 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LV28_21135 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LV28_15740 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D LV28_15745 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D LV28_15755 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D LV28_00285 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LV28_06385 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D LV28_18380 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D LV28_00740 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D LV28_00465 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D LV28_11405 argJ; ornithine acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D LV28_15495 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D LV28_18110 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D LV28_18435 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D LV28_08790 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D LV28_04930 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D LV28_03800 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:ppnm00330] D LV28_02820 N-acyl-D-amino-acid deacylase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D LV28_05755 hydantoin utilization protein A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D LV28_05760 hydantoin utilization protein B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D LV28_21125 lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D LV28_17610 arginase K01480 speB; agmatinase [EC:3.5.3.11] D LV28_14945 hypothetical protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D LV28_11070 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_07265 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_02475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_03250 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D LV28_03130 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D LV28_03255 acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D LV28_03135 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D LV28_03140 hypothetical protein K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D LV28_05065 FAD/NAD(P)-binding oxidoreductase K24954 ooxA; octopine oxidase subunit A D LV28_05075 FAD-dependent oxidoreductase K24955 ooxB; octopine oxidase subunit B D LV28_08285 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D LV28_09405 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D LV28_13705 putA; transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D LV28_11305 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D LV28_11020 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D LV28_00840 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D LV28_16615 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D LV28_16850 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D LV28_14325 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] C 00340 Histidine metabolism [PATH:ppnm00340] D LV28_12555 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D LV28_24370 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D LV28_12500 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D LV28_12505 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D LV28_12515 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D LV28_12525 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D LV28_12510 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D LV28_12535 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D LV28_24005 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_12540 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_22100 histidinol phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D LV28_12550 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D LV28_02635 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D LV28_02630 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D LV28_02645 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D LV28_07390 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_09595 dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:ppnm00350] D LV28_24005 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_12540 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_13010 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_23330 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_17765 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D LV28_03160 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D LV28_17550 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D LV28_16970 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D LV28_03155 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D LV28_16495 fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D LV28_10220 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LV28_02220 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LV28_11970 lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LV28_22445 4-hydroxyphenylacetate 3-monooxygenase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D LV28_13030 extradiol ring-cleavage dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D LV28_13035 betaine-aldehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D LV28_13045 2-oxo-hepta-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D LV28_13040 5-keto-4-deoxy-D-glucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D LV28_07180 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_18085 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_05455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_20245 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_17560 gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D LV28_05930 gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D LV28_21320 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] D LV28_17555 5-carboxymethyl-2-hydroxymuconate isomerase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] D LV28_05215 fumarylacetoacetate hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:ppnm00360] D LV28_14355 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D LV28_11590 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D LV28_11585 hypothetical protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D LV28_13220 phenylacetate-CoA oxygenase K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D LV28_13225 phenylacetate-CoA oxygenase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D LV28_13230 phenylacetic acid degradation protein K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D LV28_13235 phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D LV28_13240 phenylacetic acid degradation protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D LV28_11580 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D LV28_19205 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_16230 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LV28_23785 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LV28_24005 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_12540 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_13010 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_23330 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_17765 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D LV28_06405 hypothetical protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D LV28_03450 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D LV28_22940 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D LV28_16615 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D LV28_07265 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_02475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_03030 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D LV28_16105 monooxygenase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D LV28_17810 FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D LV28_19235 3-(3-hydroxyphenyl)propionate hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D LV28_07795 3-(3-hydroxyphenyl)propionate hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D LV28_19230 mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D LV28_19215 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D LV28_20325 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_19225 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_22260 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_21850 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D LV28_21845 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:ppnm00380] D LV28_07455 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D LV28_02295 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D LV28_06720 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D LV28_24945 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9] D LV28_07445 kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D LV28_06705 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] D LV28_06710 aminocarboxymuconate-semialdehyde decarboxylase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] D LV28_17435 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LV28_06695 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LV28_06700 2-aminomuconate deaminase K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5] D LV28_04080 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_07465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_07265 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_02475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_15985 catalase K03781 katE; catalase [EC:1.11.1.6] D LV28_18770 catalase K03781 katE; catalase [EC:1.11.1.6] D LV28_11340 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ppnm00400] D LV28_09355 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D LV28_12705 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D LV28_11195 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D LV28_11155 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D LV28_20870 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D LV28_04475 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D LV28_11620 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D LV28_11660 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D LV28_11665 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D LV28_23950 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D LV28_11670 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D LV28_23965 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D LV28_23955 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D LV28_25405 hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5] D LV28_20860 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D LV28_20865 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D LV28_13680 ArtI protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D LV28_24005 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_12540 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_13010 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_23330 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_14355 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ppnm00410] D LV28_21060 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D LV28_21680 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_21065 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D LV28_21875 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D LV28_18145 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D LV28_04995 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_14905 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_22735 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_17415 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_15825 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_20810 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D LV28_15830 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_10295 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D LV28_14245 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:ppnm00430] D LV28_19870 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LV28_19795 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LV28_22935 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D LV28_06385 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D LV28_17940 DUF4440 domain-containing protein K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D LV28_17945 FAD-dependent oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-] D LV28_17935 sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D LV28_17930 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LV28_20090 long-chain fatty acid--CoA ligase K26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-] D LV28_20085 sulfoacetaldehyde dehydrogenase K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81] C 00440 Phosphonate and phosphinate metabolism [PATH:ppnm00440] D LV28_21770 phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D LV28_21765 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] D LV28_17285 phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2] D LV28_17290 phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-] D LV28_17260 2-aminoethylphosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D LV28_21760 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D LV28_17205 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D LV28_17215 hypothetical protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D LV28_17210 hypothetical protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D LV28_17190 alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D LV28_17185 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D LV28_17200 carbon-phosphorus lyase K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] C 00450 Selenocompound metabolism [PATH:ppnm00450] D LV28_03850 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LV28_14630 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LV28_16465 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D LV28_01715 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D LV28_06590 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D LV28_18445 methionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D LV28_21260 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D LV28_20715 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D LV28_20710 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D LV28_06885 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D LV28_22355 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D LV28_21105 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ppnm00460] D LV28_17860 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D LV28_19870 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LV28_19795 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LV28_00620 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LV28_22015 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D LV28_06820 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ppnm00470] D LV28_00880 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LV28_16615 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D LV28_11440 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LV28_18830 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LV28_11460 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LV28_06415 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D LV28_18150 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D LV28_22535 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D LV28_18190 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D LV28_07140 alanine racemase K19967 dta; D-threonine aldolase [EC:4.1.2.42] D LV28_15415 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LV28_12745 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D LV28_16850 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D LV28_05070 sarcosine oxidase subunit alpha K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma D LV28_09635 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D LV28_06405 hypothetical protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D LV28_03450 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D LV28_22940 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:ppnm00480] D LV28_19870 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LV28_19795 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LV28_10880 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D LV28_13400 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D LV28_15835 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D LV28_15840 allophanate hydrolase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D LV28_14375 gamma-glutamyl ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D LV28_04135 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LV28_16735 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D LV28_16745 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D LV28_20750 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D LV28_06580 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LV28_16070 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_01935 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_04295 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_18710 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_14865 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_23795 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_15865 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_17475 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_05915 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_01395 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D LV28_06315 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D LV28_08980 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D LV28_20400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LV28_20560 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D LV28_09395 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D LV28_11070 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ppnm00540] D LV28_01035 UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D LV28_11420 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D LV28_01025 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D LV28_24050 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D LV28_01040 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D LV28_09030 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D LV28_17125 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D LV28_23520 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D LV28_17120 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D LV28_09040 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D LV28_10500 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D LV28_15410 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LV28_11160 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D LV28_21840 hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D LV28_13600 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D LV28_20915 hypothetical protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D LV28_10905 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D LV28_16545 ADP-heptose synthase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D LV28_20920 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D LV28_10510 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D LV28_07705 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D LV28_10170 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D LV28_22595 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppnm00541] D LV28_05690 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LV28_12115 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LV28_11935 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LV28_20910 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D LV28_08490 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LV28_08495 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LV28_08485 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LV28_00300 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D LV28_04970 TDP-4-oxo-6-deoxy-D-glucose aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D LV28_02450 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D LV28_08785 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D LV28_15905 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LV28_13505 UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D LV28_13500 capsular biosynthesis protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367] D LV28_13495 UDP-N-acetyl glucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] D LV28_13475 capsular biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00550 Peptidoglycan biosynthesis [PATH:ppnm00550] D LV28_12560 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LV28_10130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LV28_09100 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LV28_11445 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LV28_11460 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LV28_11475 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LV28_11440 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LV28_11470 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LV28_00995 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LV28_14690 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_10465 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_05580 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_20365 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_11465 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LV28_11450 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LV28_11150 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D LV28_04120 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LV28_12735 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LV28_14330 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D LV28_06935 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LV28_11480 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LV28_16610 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LV28_07635 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:ppnm00552] D LV28_14690 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_10465 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_05580 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_20365 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_13475 capsular biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ppnm00543] D LV28_24045 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D LV28_02550 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ppnm00730] D LV28_08585 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D LV28_00870 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LV28_10585 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LV28_15980 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_22435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_23380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_12630 cytochrome C biogenesis protein CcdA K03153 thiO; glycine oxidase [EC:1.4.3.19] D LV28_05600 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LV28_21755 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LV28_12620 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D LV28_24920 hypothetical protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D LV28_11110 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D LV28_23005 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LV28_09045 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ppnm00740] D LV28_22410 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D LV28_20275 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LV28_20335 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LV28_06500 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D LV28_20270 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D LV28_00320 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D LV28_08890 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D LV28_17830 hypothetical protein K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D LV28_05500 flavin reductase K23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36] D LV28_23735 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LV28_11790 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:ppnm00750] D LV28_07350 pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D LV28_00210 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D LV28_00780 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D LV28_20855 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D LV28_10940 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D LV28_09800 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D LV28_00750 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D LV28_16845 hypothetical protein K01733 thrC; threonine synthase [EC:4.2.3.1] D LV28_05890 dehydrogenase K18611 K18611; 4-pyridoxate dehydrogenase [EC:1.1.99.42] C 00760 Nicotinate and nicotinamide metabolism [PATH:ppnm00760] D LV28_08855 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D LV28_20515 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D LV28_08865 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D LV28_08860 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D LV28_09980 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D LV28_18230 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D LV28_24270 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D LV28_08430 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D LV28_21240 nadE; NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D LV28_11120 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D LV28_03380 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D LV28_09310 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D LV28_22230 NADP transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D LV28_22235 NAD(P)(+) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D LV28_18555 NAD(P)(+) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D LV28_18560 NADP transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D LV28_22240 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D LV28_18550 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D LV28_07430 peptidase M29 K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9] D LV28_21870 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D LV28_05855 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D LV28_07180 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_18085 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_05455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LV28_20245 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:ppnm00770] D LV28_21655 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_20510 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_03275 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_04625 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LV28_04620 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D LV28_04615 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D LV28_20770 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D LV28_20775 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D LV28_05320 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D LV28_09230 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D LV28_17375 hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D LV28_22185 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D LV28_09720 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D LV28_13020 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D LV28_21065 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D LV28_25540 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D LV28_08905 phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D LV28_17015 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D LV28_11380 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D LV28_09795 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D LV28_17465 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LV28_21875 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D LV28_18145 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D LV28_04995 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_14905 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_22735 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_17415 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D LV28_21060 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:ppnm00780] D LV28_16815 amidophosphoribosyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D LV28_09855 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LV28_08390 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_03530 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_00355 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_21185 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_12065 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_09480 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_09865 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_08965 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_05315 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_01030 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LV28_16345 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D LV28_16350 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D LV28_16340 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D LV28_16335 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D LV28_16565 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ppnm00785] D LV28_16640 lipoate--protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D LV28_16645 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24410 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LV28_10350 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D LV28_24415 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D LV28_04085 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D LV28_04080 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D LV28_13735 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D LV28_13745 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LV28_13740 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ppnm00790] D LV28_05180 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D LV28_05430 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D LV28_05595 GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D LV28_18330 dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D LV28_15895 diguanylate cyclase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D LV28_09220 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D LV28_06130 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D LV28_23065 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LV28_23975 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D LV28_22410 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D LV28_20275 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D LV28_09260 anthranilate synthase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D LV28_15115 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D LV28_14360 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D LV28_14355 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D LV28_15110 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D LV28_15105 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D LV28_18225 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D LV28_09930 cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D LV28_07730 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D LV28_00765 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D LV28_23020 hypothetical protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D LV28_00755 molybdenum cofactor biosynthesis protein MoaA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D LV28_09945 molybdenum cofactor biosynthesis protein MoaA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D LV28_18240 molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D LV28_09940 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:ppnm00670] D LV28_23065 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LV28_24395 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LV28_06820 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LV28_08885 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D LV28_10985 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LV28_15070 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LV28_25225 formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LV28_13745 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D LV28_16465 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D LV28_23070 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LV28_17245 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D LV28_15685 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D LV28_15850 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ppnm00860] D LV28_24030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LV28_11770 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D LV28_20355 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D LV28_12780 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D LV28_21150 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D LV28_25400 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D LV28_13685 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D LV28_08425 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D LV28_15035 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D LV28_18500 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D LV28_12980 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D LV28_25395 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D LV28_20720 uroporphyrin-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D LV28_08115 uroporphyrin-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D LV28_16925 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D LV28_16920 cytochrome C oxidase subunit I K02259 COX15; heme a synthase [EC:1.17.99.9] D LV28_20735 cobalamin biosynthesis protein CbiX K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D LV28_17915 cobalamin biosynthesis protein CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D LV28_17920 cobalt chelatase K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D LV28_09360 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D LV28_21000 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D LV28_21050 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D LV28_23000 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D LV28_21040 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D LV28_21035 hypothetical protein K02225 cobC1; cobalamin biosynthesis protein CobC D LV28_21045 adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D LV28_21010 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D LV28_21005 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D LV28_21015 hypothetical protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D LV28_18835 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D LV28_20205 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppnm00130] D LV28_06215 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D LV28_05860 thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D LV28_23250 chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D LV28_09410 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D LV28_20250 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D LV28_11790 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D LV28_11710 ubiquinone biosynthesis protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D LV28_22930 bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D LV28_10970 hypothetical protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D LV28_18285 ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D LV28_11500 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D LV28_10340 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D LV28_08565 NAD(P)H-quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D LV28_04510 NAD(P)H-quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D LV28_25015 hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D LV28_17765 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ppnm00900] D LV28_05600 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LV28_21755 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D LV28_01005 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D LV28_03790 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D LV28_17050 ipk; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D LV28_03785 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D LV28_24320 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D LV28_21740 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D LV28_08830 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_11790 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D LV28_05605 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D LV28_11325 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D LV28_00995 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LV28_23010 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:ppnm00909] D LV28_21715 squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:ppnm00907] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_16275 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D LV28_12020 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_18355 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D LV28_11065 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ppnm00523] D LV28_08490 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LV28_08495 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LV28_08485 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LV28_00300 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:ppnm01054] D LV28_06415 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D LV28_18150 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D LV28_08495 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ppnm00946] D LV28_17860 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids [PATH:ppnm00996] D LV28_19940 p-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61] C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:ppnm00311] D LV28_16850 hypothetical protein K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D LV28_02540 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D LV28_11750 PbsX family transcriptional regulator K01434 pac; penicillin G amidase [EC:3.5.1.11] D LV28_09535 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:ppnm00332] D LV28_11305 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D LV28_11020 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ppnm00261] D LV28_20715 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D LV28_20710 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D LV28_24090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LV28_23935 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LV28_20385 hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LV28_23585 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LV28_21215 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LV28_02950 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LV28_11040 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ppnm00521] D LV28_20410 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2] D LV28_10515 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D LV28_24035 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D LV28_08490 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LV28_08495 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LV28_08485 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LV28_00300 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D LV28_20410 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:ppnm00525] D LV28_08490 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LV28_08495 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ppnm00401] D LV28_20865 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D LV28_24005 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_12540 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_13010 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_23330 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D LV28_11620 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D LV28_11660 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D LV28_09870 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LV28_08390 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_03530 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_00355 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_21185 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_12065 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_09480 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_09865 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_08965 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_05315 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:ppnm00998] D LV28_09860 acyl carrier protein K02078 acpP; acyl carrier protein D LV28_13450 acyl carrier protein K02078 acpP; acyl carrier protein D LV28_21770 phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D LV28_21765 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00999 Biosynthesis of various plant secondary metabolites [PATH:ppnm00999] D LV28_15405 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D LV28_11155 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D LV28_17860 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ppnm00362] D LV28_16480 hypothetical protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D LV28_19990 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D LV28_17790 3-oxoadipate CoA-transferase K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D LV28_17785 3-oxoadipate CoA-transferase K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D LV28_12020 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_18355 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_17780 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D LV28_11575 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D LV28_17490 hypothetical protein K10621 cmtC; 2,3-dihydroxy-p-cumate/2,3-dihydroxybenzoate 3,4-dioxygenase [EC:1.13.11.- 1.13.11.14] D LV28_17495 aldolase K10622 cmtD; HCOMODA/2-hydroxy-3-carboxy-muconic semialdehyde decarboxylase [EC:4.1.1.-] D LV28_20325 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_19225 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_22260 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_21850 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D LV28_21845 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D LV28_17435 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LV28_06695 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LV28_20320 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_08710 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_05715 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_04875 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_20330 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D LV28_21345 amidohydrolase K20941 graF; gamma-resorcylate decarboxylase [EC:4.1.1.103] D LV28_21340 monooxygenase K20942 graA; resorcinol 4-hydroxylase (FADH2) [EC:1.14.14.27] D LV28_21360 6-chlorohydroxyquinol-1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D LV28_21355 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D LV28_19975 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D LV28_19970 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D LV28_19980 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D LV28_01990 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D LV28_05540 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D LV28_19985 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D LV28_15590 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D LV28_15580 GlcNAc-PI de-N-acetylase K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83] D LV28_15585 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D LV28_20000 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D LV28_17545 salicylate hydroxylase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24] D LV28_06215 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D LV28_05860 thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D LV28_06875 4-hydroxybenzoate--CoA ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25] D LV28_08140 cyclohexanecarboxylate-CoA ligase K04116 aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-] D LV28_08145 cyclohexanecarboxyl-CoA dehydrogenase K04117 aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-] D LV28_08155 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D LV28_08150 2-ketocyclohexanecarboxyl-CoA hydrolase K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-] D LV28_03385 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LV28_18350 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D LV28_07465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D LV28_16230 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LV28_23785 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_06845 benzoyl-CoA oxygenase K15511 boxA; benzoyl-CoA 2,3-epoxidase subunit A [EC:1.14.13.208] D LV28_06850 benzoyl-CoA oxygenase subunit B K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208] D LV28_06870 aldehyde dehydrogenase K15514 boxD; 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [EC:1.2.1.77] D LV28_06855 benzoyl-CoA-dihydrodiol lyase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] C 00627 Aminobenzoate degradation [PATH:ppnm00627] D LV28_07265 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_02475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_03305 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D LV28_11865 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D LV28_06875 4-hydroxybenzoate--CoA ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25] D LV28_21225 alpha-hydroxy-acid oxidizing enzyme K15054 mdlB; (S)-mandelate dehydrogenase [EC:1.1.99.31] D LV28_15510 benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7] D LV28_15515 salicylaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D LV28_11790 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D LV28_06220 2-aminobenzoate-CoA ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32] D LV28_06240 salicylyl-CoA 5-hydroxylase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40] D LV28_08940 naphthalene 1,2-dioxygenase K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D LV28_08955 naphthalene 1,2-dioxygenase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] D LV28_19945 salicylaldehyde dehydrogenase K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67] D LV28_15530 Rieske (2Fe-2S) protein K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D LV28_15525 Vanillate O-demethylase oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:ppnm00364] D LV28_05635 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_12990 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_13650 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_21355 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:ppnm00625] D LV28_02220 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LV28_11970 lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LV28_10220 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D LV28_21190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_01250 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_06785 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D LV28_00830 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D LV28_21370 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D LV28_02615 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ppnm00361] D LV28_05635 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_12990 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_13650 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_20550 ferredoxin K21607 pcpD; tetrachlorobenzoquinone reductase [EC:1.1.1.404] D LV28_21355 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D LV28_21360 6-chlorohydroxyquinol-1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D LV28_19165 hypothetical protein K06912 tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase [EC:1.14.11.-] D LV28_00830 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D LV28_21370 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D LV28_02615 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:ppnm00623] D LV28_12090 enoyl-CoA hydratase K07546 bbsH; (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180] D LV28_15515 salicylaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D LV28_05635 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_12990 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_13650 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D LV28_21355 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation [PATH:ppnm00622] D LV28_15515 salicylaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D LV28_17435 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LV28_06695 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D LV28_20320 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_08710 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_05715 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_04875 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_20330 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D LV28_17490 hypothetical protein K10621 cmtC; 2,3-dihydroxy-p-cumate/2,3-dihydroxybenzoate 3,4-dioxygenase [EC:1.13.11.- 1.13.11.14] D LV28_17495 aldolase K10622 cmtD; HCOMODA/2-hydroxy-3-carboxy-muconic semialdehyde decarboxylase [EC:4.1.1.-] D LV28_20325 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_19225 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_22260 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_21850 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D LV28_21845 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:ppnm00633] D LV28_10780 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D LV28_08940 naphthalene 1,2-dioxygenase K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D LV28_08955 naphthalene 1,2-dioxygenase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] C 00642 Ethylbenzene degradation [PATH:ppnm00642] D LV28_08940 naphthalene 1,2-dioxygenase K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D LV28_08955 naphthalene 1,2-dioxygenase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] D LV28_12020 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D LV28_18355 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:ppnm00643] D LV28_03160 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D LV28_17550 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D LV28_16970 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D LV28_03155 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D LV28_16495 fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D LV28_07265 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D LV28_02475 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation D LV28_15740 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D LV28_15745 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D LV28_15755 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:ppnm00930] D LV28_08135 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D LV28_11565 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:ppnm00621] D LV28_20320 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_08710 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_05715 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_04875 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LV28_20330 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D LV28_20325 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_19225 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_22260 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D LV28_21850 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D LV28_21845 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:ppnm00626] D LV28_08940 naphthalene 1,2-dioxygenase K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D LV28_08955 naphthalene 1,2-dioxygenase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] D LV28_08950 salicylate hydroxylase K18242 nagG; salicylate 5-hydroxylase large subunit [EC:1.14.13.172] D LV28_08945 salicylate hydroxylase K18243 nagH; salicylate 5-hydroxylase small subunit [EC:1.14.13.172] D LV28_02220 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D LV28_11970 lactaldehyde reductase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D LV28_10220 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:ppnm00624] D LV28_08940 naphthalene 1,2-dioxygenase K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D LV28_08955 naphthalene 1,2-dioxygenase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] D LV28_19975 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D LV28_19970 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ppnm03020] D LV28_13065 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LV28_13060 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LV28_12805 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LV28_04830 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ppnm03010] D LV28_20885 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LV28_00975 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LV28_12905 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LV28_12810 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LV28_12850 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LV28_00645 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LV28_12955 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LV28_12865 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LV28_18430 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LV28_12940 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LV28_12815 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LV28_12960 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LV28_12820 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LV28_12870 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LV28_04580 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LV28_22975 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LV28_12890 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LV28_00655 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LV28_12915 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LV28_09070 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LV28_05830 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LV28_13080 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LV28_12920 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LV28_12935 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LV28_12930 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LV28_12875 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LV28_12860 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LV28_13070 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LV28_00660 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LV28_13075 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LV28_13085 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LV28_18425 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LV28_12885 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LV28_12840 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LV28_12900 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LV28_12800 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LV28_12855 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LV28_22990 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LV28_04390 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LV28_11320 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LV28_12910 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LV28_12925 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LV28_12880 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LV28_17035 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D LV28_11315 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LV28_08845 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LV28_12895 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LV28_12845 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LV28_04535 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D LV28_09885 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LV28_08850 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LV28_14465 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LV28_04395 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LV28_08010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_19730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_11555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_13150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_07995 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_13135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_19745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_11540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_07990 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_13130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_19750 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_11535 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppnm00970] D LV28_13525 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_04570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_07135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_11945 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_08000 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_11545 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_19740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_13140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_07325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_07330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_08280 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_13770 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_05810 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_09990 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LV28_09995 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LV28_03485 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LV28_04555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LV28_04560 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LV28_09750 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LV28_17045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LV28_04565 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LV28_11940 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LV28_07130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LV28_09755 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LV28_09760 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LV28_10395 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LV28_13115 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LV28_24530 tRNA-His K14226 tRNA-His; tRNA His D LV28_08005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LV28_11550 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LV28_13145 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LV28_19735 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LV28_23655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_14550 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_20680 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_09570 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_00405 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_00415 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_03740 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_00245 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LV28_00250 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LV28_00255 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LV28_22600 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LV28_10650 tRNA-Met K14230 tRNA-Met; tRNA Met D LV28_08070 tRNA-Met K14230 tRNA-Met; tRNA Met D LV28_24505 tRNA-Met K14230 tRNA-Met; tRNA Met D LV28_05545 tRNA-Met K14230 tRNA-Met; tRNA Met D LV28_15100 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LV28_04150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LV28_11330 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LV28_06065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LV28_04865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LV28_24095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LV28_18870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LV28_21285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LV28_12430 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LV28_13110 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LV28_06635 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LV28_13100 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LV28_13120 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LV28_06295 tRNA-Val K14237 tRNA-Val; tRNA Val D LV28_04410 tRNA-Val K14237 tRNA-Val; tRNA Val D LV28_16085 tRNA-Val K14237 tRNA-Val; tRNA Val D LV28_03490 tRNA-Val K14237 tRNA-Val; tRNA Val D LV28_22365 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D LV28_24030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LV28_15330 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LV28_06525 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LV28_01975 hypothetical protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LV28_15340 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LV28_15325 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LV28_23145 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D LV28_05730 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LV28_18325 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LV28_10895 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LV28_10900 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LV28_04405 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LV28_21280 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LV28_22355 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D LV28_24070 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LV28_21105 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LV28_15070 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LV28_25225 formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LV28_05685 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LV28_11035 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LV28_08895 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LV28_23435 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LV28_16440 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LV28_11290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LV28_24325 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LV28_04385 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LV28_04380 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LV28_18465 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LV28_23575 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LV28_14285 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ppnm03060] D LV28_12835 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LV28_13095 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LV28_23650 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LV28_18735 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LV28_18730 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LV28_18740 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LV28_14450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D LV28_11410 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LV28_16790 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D LV28_11275 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LV28_16980 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D LV28_12485 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D LV28_12480 tatB; preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D LV28_12475 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D LV28_09820 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D LV28_08900 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ppnm04122] D LV28_15980 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_22435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_23380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_01855 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D LV28_05625 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D LV28_05695 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D LV28_18570 mnmA; tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LV28_00765 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D LV28_09930 cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D LV28_00760 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D LV28_00230 thiamine biosynthesis protein ThiS K03636 moaD; sulfur-carrier protein D LV28_16765 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D LV28_07730 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D LV28_23020 hypothetical protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D LV28_12625 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:ppnm03018] D LV28_11295 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D LV28_09925 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D LV28_23525 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LV28_04575 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D LV28_13315 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D LV28_08540 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D LV28_00420 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LV28_08510 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LV28_24155 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D LV28_22870 heat-shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D LV28_09270 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LV28_07755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LV28_24345 RNA-binding protein hfq K03666 hfq; host factor-I protein D LV28_06085 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D LV28_08755 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D LV28_09215 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ppnm03030] D LV28_06290 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_07935 ethanolamine utilization protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_08525 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LV28_24165 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LV28_03340 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LV28_11025 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LV28_20755 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LV28_14475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LV28_18955 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LV28_00665 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LV28_05560 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D LV28_17340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LV28_06285 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LV28_01045 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LV28_05645 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LV28_00945 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ppnm03410] D LV28_23310 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LV28_11680 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LV28_17070 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D LV28_17065 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LV28_24075 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D LV28_23860 adenosine deaminase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D LV28_00360 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LV28_00860 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LV28_00315 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LV28_15650 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LV28_05645 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LV28_23470 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LV28_00945 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ppnm03420] D LV28_03795 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LV28_17330 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D LV28_14665 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LV28_09775 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D LV28_16015 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LV28_11950 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LV28_05645 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LV28_00945 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ppnm03430] D LV28_23620 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LV28_09155 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D LV28_16015 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LV28_11950 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LV28_09015 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LV28_05610 exodeoxyribonuclease K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LV28_23470 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LV28_17340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LV28_08525 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LV28_14475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LV28_24165 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LV28_11025 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LV28_03340 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LV28_06290 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_07935 ethanolamine utilization protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_20755 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LV28_00945 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LV28_24555 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D LV28_19115 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:ppnm03440] D LV28_23470 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LV28_17340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LV28_09805 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LV28_24175 recR; recombination protein RecR K06187 recR; recombination protein RecR D LV28_10630 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D LV28_05645 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LV28_17570 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LV28_18490 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LV28_18495 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D LV28_18755 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LV28_08610 hypothetical protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D LV28_08600 hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LV28_08525 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LV28_14475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LV28_24165 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LV28_11025 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LV28_03340 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LV28_06290 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_07935 ethanolamine utilization protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_20755 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LV28_13690 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D LV28_00650 primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining [PATH:ppnm03450] D LV28_17520 hypothetical protein K10979 ku; DNA end-binding protein Ku D LV28_17515 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ppnm03250] D LV28_24060 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ppnm02010] D LV28_00595 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D LV28_00600 sulfate transporter K02046 cysU; sulfate/thiosulfate transport system permease protein D LV28_00605 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D LV28_18000 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LV28_02655 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LV28_17990 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D LV28_02660 ABC transporter permease K15552 tauC; taurine transport system permease protein D LV28_17995 nitrate ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D LV28_23095 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_13795 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_24250 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_09255 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_13785 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_09250 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_24265 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_09245 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_24255 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_13790 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_07535 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D LV28_07270 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D LV28_07540 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D LV28_07545 hypothetical protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D LV28_17275 phosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D LV28_24145 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D LV28_20105 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D LV28_17265 phosphonate ABC transporter permease K02011 afuB; iron(III) transport system permease protein D LV28_23080 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D LV28_20100 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D LV28_17270 amino acid ABC transporter substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LV28_23075 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LV28_20110 ABC transporter substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LV28_05535 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein D LV28_05530 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D LV28_05525 proline/glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D LV28_10800 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D LV28_10805 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D LV28_10795 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D LV28_10790 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D LV28_12585 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D LV28_21745 ABC transporter K07323 mlaC; phospholipid transport system substrate-binding protein D LV28_16580 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D LV28_12595 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D LV28_16570 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D LV28_12600 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D LV28_12580 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D LV28_16575 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D LV28_12605 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D LV28_01240 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D LV28_01230 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D LV28_01235 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D LV28_01225 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D LV28_08445 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D LV28_22065 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D LV28_08450 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D LV28_22070 ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D LV28_08455 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D LV28_22075 ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D LV28_08460 glycerol-3-phosphate ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D LV28_06120 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D LV28_06115 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D LV28_06110 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D LV28_06105 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LV28_17155 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D LV28_17165 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D LV28_17150 phosphonate ABC transporter ATP-binidng protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D LV28_18385 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LV28_15875 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LV28_18395 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D LV28_18390 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D LV28_18400 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D LV28_24480 cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LV28_24475 ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D LV28_07185 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_20310 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_20690 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_22295 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_22455 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_23035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_04585 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_04905 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_05030 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14930 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_19280 ethanolamine utilization protein EutN K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_06715 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_07785 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_16500 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_15555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_05795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_02885 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_01505 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_10300 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_13715 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_08825 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14225 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14200 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_07190 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_03405 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_22475 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_23040 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_05040 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14925 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_19275 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_06725 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_07780 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_15560 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_05790 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_20305 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D LV28_01510 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_08820 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14220 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14190 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_19270 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_07775 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_01515 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14185 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08815 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D LV28_14215 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_05035 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_20300 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_15565 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_14920 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_03400 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_23045 amino acid ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D LV28_07195 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_22480 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_06730 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_03395 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_22465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_23050 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_05045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14915 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_06735 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_15570 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_05780 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_20295 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_07200 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08805 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14230 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14180 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_05775 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_05025 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_20290 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_15575 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14910 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_03390 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_07770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_23055 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_07205 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_22470 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_06740 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_01520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_05295 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D LV28_20230 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D LV28_20225 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D LV28_20220 phosphate ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D LV28_15805 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D LV28_15800 urea ABC transporter permease K11960 urtB; urea transport system permease protein D LV28_15795 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D LV28_15790 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D LV28_15785 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D LV28_05330 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D LV28_15690 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D LV28_15700 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein D LV28_15705 peptide transporter K12370 dppC; dipeptide transport system permease protein D LV28_15710 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D LV28_15715 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D LV28_22025 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D LV28_22030 glutathione ABC transporter permease K13890 gsiC; glutathione transport system permease protein D LV28_22035 glutathione ABC transporter permease K13891 gsiD; glutathione transport system permease protein D LV28_22020 glutathione ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D LV28_24115 peptide ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D LV28_24120 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D LV28_24125 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein D LV28_24130 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D LV28_22380 hypothetical protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D LV28_22385 hypothetical protein K23228 fhuB; ferric hydroxamate transport system permease protein D LV28_22395 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D LV28_16995 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D LV28_17005 nodulation factor ABC transporter ATP-binding protein NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein D LV28_23480 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein D LV28_23485 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D LV28_20745 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D LV28_20740 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D LV28_17105 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D LV28_08505 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D LV28_18370 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D LV28_21560 macrolide transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D LV28_22390 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D LV28_12635 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ppnm02060] D LV28_16760 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LV28_16755 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D LV28_16750 PTS sugar transporter subunit IIB K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LV28_17090 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ppnm03070] D LV28_18585 hypothetical protein K03221 yscF; type III secretion protein F D LV28_15135 hypothetical protein K03221 yscF; type III secretion protein F D LV28_19470 hypothetical protein K03221 yscF; type III secretion protein F D LV28_19595 hypothetical protein K04056 yscO; type III secretion protein O D LV28_19555 hypothetical protein K03219 yscC; type III secretion protein C D LV28_18635 hypothetical protein K03219 yscC; type III secretion protein C D LV28_19615 hypothetical protein K03222 yscJ; type III secretion protein J D LV28_25510 hypothetical protein K03222 yscJ; type III secretion protein J D LV28_18680 ssaR; type III secretion system protein SsaR K03226 yscR; type III secretion protein R D LV28_19580 ssaR; type III secretion system protein SsaR K03226 yscR; type III secretion protein R D LV28_18685 type III secretion system protein SsaS K03227 yscS; type III secretion protein S D LV28_19575 hypothetical protein K03227 yscS; type III secretion protein S D LV28_18690 type III secretion protein K03228 yscT; type III secretion protein T D LV28_19570 hypothetical protein K03228 yscT; type III secretion protein T D LV28_19565 type III secretion protein K03229 yscU; type III secretion protein U D LV28_18655 secretion system apparatus protein SsaV K03230 yscV; type III secretion protein V D LV28_15185 type III secretion system protein InvA K03230 yscV; type III secretion protein V D LV28_19490 Low calcium response locus protein D K03230 yscV; type III secretion protein V D LV28_18660 type III secretion protein ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D LV28_19600 fliI; type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D LV28_15205 hypothetical protein K03225 yscQ; type III secretion protein Q D LV28_19585 hypothetical protein K03225 yscQ; type III secretion protein Q D LV28_19605 hypothetical protein K03223 yscL; type III secretion protein L D LV28_15930 hypothetical protein K02453 gspD; general secretion pathway protein D D LV28_15920 type II secretion system protein G K02456 gspG; general secretion pathway protein G D LV28_15925 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G D LV28_15970 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D LV28_15955 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D LV28_15375 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D LV28_18735 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LV28_18730 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LV28_13095 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LV28_23650 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LV28_12835 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LV28_18740 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LV28_14450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D LV28_11410 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LV28_16980 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D LV28_16790 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D LV28_11275 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LV28_12485 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D LV28_12480 tatB; preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D LV28_12475 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:ppnm02020] D LV28_06090 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D LV28_06095 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D LV28_06120 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D LV28_08660 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_03770 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_08760 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_08655 ompR; two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D LV28_03765 two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D LV28_07610 peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D LV28_09835 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D LV28_08645 multidrug transporter K07799 mdtA; membrane fusion protein, multidrug efflux system D LV28_08635 multidrug transporter K07788 mdtB; multidrug efflux pump D LV28_08630 multidrug transporter K07789 mdtC; multidrug efflux pump D LV28_17365 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D LV28_01670 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D LV28_14090 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D LV28_14085 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D LV28_13820 hypothetical protein K02406 fliC; flagellin D LV28_13995 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA D LV28_14080 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D LV28_04750 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D LV28_04770 ATPase K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D LV28_04765 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D LV28_04760 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D LV28_09235 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D LV28_13805 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D LV28_09240 two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D LV28_13800 two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D LV28_16920 cytochrome C oxidase subunit I K02259 COX15; heme a synthase [EC:1.17.99.9] D LV28_14470 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D LV28_13335 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D LV28_08220 multidrug transporter K18094 mexX; membrane fusion protein, multidrug efflux system D LV28_01945 aldolase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D LV28_02570 aldolase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D LV28_02560 malate permease K11616 maeN; malate:Na+ symporter D LV28_15015 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D LV28_02520 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LV28_02515 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LV28_02505 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LV28_02510 hypothetical protein K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D LV28_03170 hypothetical protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D LV28_08620 hypothetical protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D LV28_03175 hypothetical protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D LV28_13815 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D LV28_14635 ampC; class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D LV28_03245 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D LV28_03225 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D LV28_03230 hypothetical protein K07346 fimC; fimbrial chaperone protein D LV28_03240 hypothetical protein K07347 fimD; outer membrane usher protein D LV28_04005 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D LV28_03985 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D LV28_02380 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D LV28_03980 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D LV28_02370 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D LV28_03975 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D LV28_03970 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D LV28_03965 hypothetical protein K12510 tadB; tight adherence protein B D LV28_02360 secretion system protein F K12510 tadB; tight adherence protein B D LV28_03960 pilus assembly protein TadC K12511 tadC; tight adherence protein C D LV28_02355 secretion system protein F K12511 tadC; tight adherence protein C D LV28_25110 hypothetical protein K27079 tadD; tight adherence protein D D LV28_03945 hypothetical protein K27080 tadG; tight adherence protein G D LV28_00960 bifunctional uridylyltransferase/uridylyl-removing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D LV28_21245 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D LV28_00290 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D LV28_00295 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D LV28_00285 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LV28_15090 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LV28_15095 XRE family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D LV28_02935 hypothetical protein K07713 zraR; two-component system, NtrC family, response regulator HydG D LV28_10255 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16685 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D LV28_16690 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D LV28_06190 C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D LV28_16680 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D LV28_17100 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D LV28_10595 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D LV28_14040 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D LV28_11820 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D LV28_14045 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_11815 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_00220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_20165 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_14555 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_04105 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_03300 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_14050 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_04705 chemotaxis protein K03776 aer; aerotaxis receptor D LV28_14055 hypothetical protein K03776 aer; aerotaxis receptor D LV28_14060 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D LV28_11830 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D LV28_14065 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LV28_19920 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14025 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14070 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14030 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D LV28_14830 chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA D LV28_14835 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB D LV28_14845 hypothetical protein K13489 wspD; chemotaxis-related protein WspD D LV28_14850 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D LV28_14855 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D LV28_14860 diguanylate cyclase response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D LV28_20805 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit D LV28_18400 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D LV28_18395 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D LV28_18390 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D LV28_18385 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LV28_15875 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LV28_05055 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LV28_15480 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D LV28_15475 two-component system response regulator K15012 regA; two-component system, response regulator RegA D LV28_12455 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D LV28_12450 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D LV28_12445 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D LV28_20765 hypothetical protein K08738 CYC; cytochrome c D LV28_09460 cytochrome C K08738 CYC; cytochrome c D LV28_13560 cytochrome C K08738 CYC; cytochrome c D LV28_05165 hypothetical protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LV28_16945 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LV28_05170 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LV28_16940 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LV28_23365 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D LV28_07225 hypothetical protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D LV28_07220 hypothetical protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR D LV28_13170 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D LV28_13165 hypothetical protein K07165 fecR; transmembrane sensor D LV28_13980 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D LV28_12455 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ppnm02024] D LV28_24345 RNA-binding protein hfq K03666 hfq; host factor-I protein D LV28_11620 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D LV28_11660 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D LV28_07225 hypothetical protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D LV28_09355 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D LV28_14090 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D LV28_14085 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D LV28_04750 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D LV28_04250 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_05095 branched-chain amino acid ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_06680 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_01425 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_21200 dehydrogenase K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_09670 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_21640 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_04270 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_05080 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_06670 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_06675 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_09655 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_09165 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_21210 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_01435 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_21635 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_04275 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_05085 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_09660 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_09180 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_21645 hypothetical protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_04280 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_05090 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_06665 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_01430 ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_21205 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_09665 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_09170 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_07185 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_20310 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_20690 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_22295 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_22455 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_23035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_04585 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_04905 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_05030 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14930 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_19280 ethanolamine utilization protein EutN K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_06715 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_07785 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_16500 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_15555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_05795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_02885 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_01505 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_10300 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_13715 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_08825 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14225 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14200 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_07190 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_03405 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_22475 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_23040 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_05040 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14925 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_19275 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_06725 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_07780 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_15560 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_05790 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_20305 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D LV28_01510 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_08820 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14220 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14190 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_19270 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_07775 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_01515 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14185 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08815 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D LV28_14215 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_05035 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_20300 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_15565 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_14920 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_03400 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_23045 amino acid ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D LV28_07195 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_22480 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_06730 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_03395 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_22465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_23050 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_05045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14915 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_06735 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_15570 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_05780 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_20295 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_07200 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08805 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14230 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14180 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_05775 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_05025 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_20290 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_15575 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14910 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_03390 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_07770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_23055 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_07205 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_22470 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_06740 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_01520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_07175 IclR family transcriptional regulator K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor D LV28_07220 hypothetical protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR D LV28_02785 inclusion body protein K20275 aidA; nematocidal protein AidA D LV28_07335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_05050 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_03545 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_11995 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_09120 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_05055 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LV28_22410 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D LV28_20335 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D LV28_08210 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D LV28_07515 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D LV28_19855 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LV28_07970 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LV28_12080 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LV28_12060 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LV28_07950 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D LV28_19860 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D LV28_19865 diguanylate cyclase K02034 ABC.PE.P1; peptide/nickel transport system permease protein D LV28_07955 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D LV28_12045 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D LV28_19845 dppD; peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D LV28_07960 methionine ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D LV28_07965 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D LV28_14450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D LV28_13095 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LV28_23650 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LV28_12835 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LV28_18740 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LV28_11410 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LV28_16980 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D LV28_16790 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D LV28_11275 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ppnm02030] D LV28_14045 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_11815 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_00220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_20165 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_14555 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_04105 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_03300 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_14050 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_04705 chemotaxis protein K03776 aer; aerotaxis receptor D LV28_14055 hypothetical protein K03776 aer; aerotaxis receptor D LV28_05330 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D LV28_15690 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D LV28_14065 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LV28_14060 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D LV28_11830 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D LV28_19920 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14025 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14070 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14020 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D LV28_14030 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D LV28_14035 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D LV28_11825 hypothetical protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D LV28_14040 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D LV28_11820 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D LV28_13860 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D LV28_13890 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D LV28_13895 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D LV28_14080 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D LV28_14075 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ppnm02040] D LV28_13850 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D LV28_13855 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D LV28_13860 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D LV28_13865 hypothetical protein K02411 fliH; flagellar assembly protein FliH D LV28_13870 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D LV28_13875 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D LV28_24885 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D LV28_13885 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D LV28_13890 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D LV28_13895 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D LV28_13900 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D LV28_13905 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D LV28_13910 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D LV28_13915 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D LV28_14010 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D LV28_14015 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D LV28_13975 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D LV28_13970 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D LV28_13965 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D LV28_13960 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D LV28_13955 flgE; flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D LV28_13950 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D LV28_13945 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D LV28_13940 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D LV28_13935 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D LV28_13930 flgJ; flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D LV28_13925 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D LV28_13920 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D LV28_13820 hypothetical protein K02406 fliC; flagellin D LV28_13825 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D LV28_13830 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D LV28_13835 hypothetical protein K02423 fliT; flagellar protein FliT D LV28_14080 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D LV28_14075 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D LV28_13980 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D LV28_13985 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D LV28_24480 cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LV28_05550 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D LV28_14090 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D LV28_14085 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D LV28_17100 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D LV28_13995 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D LV28_23525 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:ppnm04980] D LV28_09360 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D LV28_16465 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ppnm01501] D LV28_15640 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D LV28_09790 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D LV28_14635 ampC; class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D LV28_24970 hypothetical protein K02172 blaR1; bla regulator protein blaR1 D LV28_09520 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D LV28_09535 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LV28_08220 multidrug transporter K18094 mexX; membrane fusion protein, multidrug efflux system D LV28_07525 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system D LV28_07520 multidrug transporter K18138 acrB; multidrug efflux pump D LV28_08210 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D LV28_07515 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D LV28_04120 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LV28_12735 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LV28_06935 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LV28_11480 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LV28_08570 hypothetical protein K19211 blaOXA-62; beta-lactamase class D OXA-62 [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:ppnm01502] D LV28_11440 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LV28_00880 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LV28_11470 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LV28_11465 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LV28_11450 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppnm01503] D LV28_21840 hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D LV28_00715 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D LV28_00705 chitin deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D LV28_09140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LV28_07610 peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D LV28_09835 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D LV28_16430 disulfide bond formation protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D LV28_24060 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D LV28_07525 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system D LV28_07520 multidrug transporter K18138 acrB; multidrug efflux pump D LV28_01035 UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D LV28_13335 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ppnm01000] C 01001 Protein kinases [BR:ppnm01001] D LV28_01645 regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D LV28_06090 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D LV28_08660 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_03770 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_08760 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_17365 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D LV28_09235 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D LV28_13805 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D LV28_01865 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_07620 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_20125 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_01705 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_21570 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_03170 hypothetical protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D LV28_15020 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D LV28_00290 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D LV28_15090 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LV28_16685 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D LV28_14065 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LV28_14850 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D LV28_15480 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D LV28_10140 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS C 01009 Protein phosphatases and associated proteins [BR:ppnm01009] D LV28_15670 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D LV28_23245 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D LV28_03835 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ppnm01002] D LV28_08900 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D LV28_11375 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_15385 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_25175 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_03995 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D LV28_01105 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LV28_08365 hypothetical protein K07010 K07010; putative glutamine amidotransferase D LV28_23995 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D LV28_12670 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D LV28_15910 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_22525 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_11930 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LV28_06840 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D LV28_10380 hypothetical protein K07052 K07052; CAAX protease family protein D LV28_06580 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LV28_24390 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D LV28_16985 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D LV28_16990 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-] D LV28_20750 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D LV28_21660 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D LV28_00905 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D LV28_14885 amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D LV28_03675 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D LV28_00965 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D LV28_10965 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D LV28_09185 aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D LV28_06135 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LV28_22875 AAA family ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LV28_23010 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D LV28_15075 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D LV28_07725 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D LV28_01010 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D LV28_22045 aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D LV28_24970 hypothetical protein K02172 blaR1; bla regulator protein blaR1 D LV28_04530 hypothetical protein K09933 mtfA; MtfA peptidase D LV28_22040 hypothetical protein K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D LV28_07610 peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D LV28_09835 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D LV28_12470 2-alkenal reductase K04772 degQ; serine protease DegQ [EC:3.4.21.-] D LV28_16610 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LV28_24450 D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D LV28_19785 D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D LV28_07635 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D LV28_03510 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D LV28_18990 peptidase S14 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D LV28_03500 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D LV28_00590 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D LV28_09820 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D LV28_00840 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D LV28_16770 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D LV28_02540 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D LV28_11750 PbsX family transcriptional regulator K01434 pac; penicillin G amidase [EC:3.5.1.11] D LV28_09905 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-] D LV28_14740 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D LV28_01150 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D LV28_15465 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D LV28_24420 MFS transporter K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D LV28_22015 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D LV28_19870 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LV28_19795 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D LV28_10370 gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D LV28_19265 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D LV28_02810 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D LV28_23030 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D LV28_09345 tldD; metalloprotease TldD K03568 tldD; TldD protein D LV28_14340 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin D LV28_24360 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D LV28_24355 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:ppnm01003] D LV28_03050 cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D LV28_11150 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D LV28_14330 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D LV28_04120 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LV28_12735 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LV28_11915 glycosyl transferase family 1 K21011 pelF; polysaccharide biosynthesis protein PelF D LV28_23420 hypothetical protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D LV28_10075 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D LV28_03320 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ppnm01005] D LV28_01035 UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D LV28_01040 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D LV28_11420 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D LV28_01025 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D LV28_24050 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D LV28_09030 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D LV28_15410 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D LV28_11160 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D LV28_10500 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D LV28_21840 hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D LV28_23520 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D LV28_09040 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D LV28_17120 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D LV28_17125 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D LV28_20915 hypothetical protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D LV28_16545 ADP-heptose synthase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D LV28_10510 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D LV28_07705 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D LV28_10170 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D LV28_22595 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D LV28_13600 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D LV28_10905 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D LV28_20920 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D LV28_11745 bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppnm01011] D LV28_12560 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LV28_10130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LV28_09100 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LV28_11445 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LV28_11460 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LV28_11475 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LV28_11440 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LV28_00880 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LV28_18830 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LV28_01150 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D LV28_11465 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LV28_11450 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LV28_14690 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_10465 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_05580 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_20365 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LV28_09065 murein biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D LV28_04120 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LV28_12735 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LV28_14330 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D LV28_06935 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LV28_11480 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LV28_16610 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LV28_07635 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D LV28_24450 D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D LV28_19785 D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D LV28_11150 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D LV28_15855 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D LV28_11595 transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D LV28_20935 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D LV28_06270 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D LV28_03350 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D LV28_13630 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D LV28_09140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LV28_11255 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ppnm01004] D LV28_09870 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D LV28_09875 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LV28_13455 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LV28_13445 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D LV28_09855 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D LV28_08390 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_03530 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_00355 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_21185 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_12065 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_09480 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_09865 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_08965 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_05315 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LV28_01030 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D LV28_07365 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D LV28_21375 thioesterase K17362 ACOT13; acyl-coenzyme A thioesterase 13 [EC:3.1.2.-] D LV28_03475 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D LV28_18365 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D LV28_08870 aminotransferase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D LV28_21985 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04145 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_18855 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_04860 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D LV28_06265 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D LV28_07335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_05050 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_03545 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_11995 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_09120 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_07415 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D LV28_12055 hypothetical protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D LV28_14100 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D LV28_08315 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D LV28_09880 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LV28_09110 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LV28_10550 glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LV28_10910 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ppnm01008] D LV28_06415 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D LV28_18150 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:ppnm01006] D LV28_05605 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D LV28_11325 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D LV28_00995 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LV28_09160 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LV28_09410 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D LV28_16925 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:ppnm01007] D LV28_24030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LV28_23145 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D LV28_08535 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D LV28_18465 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LV28_23575 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LV28_14285 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LV28_24070 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LV28_16440 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LV28_21105 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LV28_08895 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LV28_05685 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LV28_11035 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LV28_23435 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LV28_18325 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LV28_24325 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LV28_10895 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LV28_10900 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LV28_21280 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LV28_11290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LV28_04405 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LV28_05730 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LV28_04385 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LV28_04380 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LV28_00740 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D LV28_08295 glutamate-pyruvate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D LV28_13010 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_23330 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D LV28_23820 aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D LV28_00920 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D LV28_24005 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_12540 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D LV28_10755 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D LV28_04920 hypothetical protein K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D LV28_16345 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D LV28_15825 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D LV28_08285 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D LV28_08790 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D LV28_03255 acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D LV28_21680 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D LV28_16350 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D LV28_02605 2,2-dialkylglycine decarboxylase K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64] D LV28_20355 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D LV28_16615 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D LV28_17465 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D LV28_09260 anthranilate synthase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D LV28_17260 2-aminoethylphosphonate--pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D LV28_21760 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D LV28_07160 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D LV28_20855 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D LV28_04970 TDP-4-oxo-6-deoxy-D-glucose aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ppnm00194] D LV28_01415 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LV28_14105 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LV28_14110 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LV28_14115 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LV28_14120 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LV28_14125 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LV28_14130 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LV28_14135 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LV28_14140 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LV28_14145 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ppnm03000] D LV28_12180 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_24550 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_19995 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D LV28_00400 cupin K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D LV28_18580 hypothetical protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D LV28_23860 adenosine deaminase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D LV28_05945 transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D LV28_19195 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_16625 XRE family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_01125 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_21405 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_09710 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_07750 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_22795 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_22530 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_17480 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D LV28_19965 LysR family transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D LV28_06595 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D LV28_05440 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D LV28_10715 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D LV28_18760 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D LV28_20695 transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D LV28_00615 transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D LV28_21435 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC D LV28_21290 LysR family transcriptional regulator K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator D LV28_17865 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D LV28_15550 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D LV28_03635 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D LV28_25030 hypothetical protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D LV28_02555 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D LV28_17575 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D LV28_18375 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D LV28_22220 transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D LV28_20145 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D LV28_14695 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D LV28_20315 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D LV28_05235 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D LV28_22510 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D LV28_17145 AraC family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D LV28_21500 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D LV28_20045 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LV28_17220 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D LV28_02625 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D LV28_23880 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D LV28_05800 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D LV28_01950 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D LV28_10010 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D LV28_17725 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D LV28_00340 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D LV28_06175 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D LV28_09685 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D LV28_05935 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D LV28_21920 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D LV28_08260 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D LV28_21625 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D LV28_06370 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D LV28_18005 2-aminoadipate aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D LV28_15535 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D LV28_17430 transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D LV28_07530 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D LV28_15625 dihydroorotate oxidase K05501 slmA; TetR/AcrR family transcriptional regulator D LV28_14650 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D LV28_07010 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D LV28_10405 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D LV28_07305 hypothetical protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D LV28_22945 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_04900 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_13260 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_14350 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_14295 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_07020 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_22520 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_06965 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_17770 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_17410 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_05475 AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D LV28_21100 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D LV28_03280 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D LV28_07220 hypothetical protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR D LV28_08165 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D LV28_14395 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D LV28_21330 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D LV28_17840 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D LV28_22430 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D LV28_02015 hypothetical protein K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D LV28_05435 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D LV28_18120 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon D LV28_15440 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D LV28_11050 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D LV28_20460 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D LV28_20080 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D LV28_17910 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D LV28_17905 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D LV28_21620 hypothetical protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D LV28_17800 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D LV28_21220 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D LV28_01445 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D LV28_19240 transcriptional regulator K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator D LV28_16660 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D LV28_07175 IclR family transcriptional regulator K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor D LV28_05055 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LV28_02225 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D LV28_00505 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D LV28_23375 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D LV28_22485 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D LV28_01830 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D LV28_06860 shikimate kinase K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator D LV28_02905 transcriptional regulator K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator D LV28_10760 DNA-binding protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D LV28_18515 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D LV28_09520 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D LV28_16565 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D LV28_10980 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LV28_05280 propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D LV28_11960 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D LV28_08350 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D LV28_14780 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein D LV28_24995 hypothetical protein K02019 modE; molybdate transport system regulatory protein D LV28_25045 hypothetical protein K07726 K07726; putative transcriptional regulator D LV28_13705 putA; transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D LV28_14575 transcriptional repressor rcnR K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression D LV28_03435 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D LV28_14155 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LV28_09305 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor D LV28_15255 hypothetical protein K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1 D LV28_20360 transcription elongation factor GreAB K06140 rnk; regulator of nucleoside diphosphate kinase D LV28_18165 GNAT family acetyltransferase K06140 rnk; regulator of nucleoside diphosphate kinase D LV28_22690 transcriptional regulator K07734 paiB; transcriptional regulator D LV28_10570 hypothetical protein K07735 algH; putative transcriptional regulator D LV28_15450 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D LV28_06815 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D LV28_11495 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ppnm03021] D LV28_12805 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LV28_13065 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LV28_13060 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LV28_04830 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LV28_05550 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D LV28_24285 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D LV28_11345 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D LV28_09850 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D LV28_13170 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D LV28_16955 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D LV28_17100 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D LV28_13995 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA D LV28_00525 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D LV28_20265 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D LV28_13090 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D LV28_12440 hypothetical protein K03599 sspA; stringent starvation protein A D LV28_12435 stringent starvation protein B K03600 sspB; stringent starvation protein B D LV28_09845 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA D LV28_09840 sugar dehydratase K03598 rseB; sigma-E factor negative regulatory protein RseB D LV28_15450 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D LV28_06155 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D LV28_04820 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D LV28_24155 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ppnm03019] D LV28_09925 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D LV28_08475 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D LV28_09815 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LV28_00420 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LV28_11100 ribonuclease N K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D LV28_23015 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D LV28_13315 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D LV28_08540 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D LV28_08510 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LV28_23525 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LV28_04575 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D LV28_24155 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D LV28_22870 heat-shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D LV28_09270 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LV28_07755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LV28_24345 RNA-binding protein hfq K03666 hfq; host factor-I protein D LV28_06085 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D LV28_08755 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D LV28_09215 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D LV28_11295 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D LV28_17075 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ D LV28_00470 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ppnm03011] D LV28_20885 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LV28_00975 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LV28_12905 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LV28_12810 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LV28_12850 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LV28_00645 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LV28_12955 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LV28_12865 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LV28_18430 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LV28_12940 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LV28_12815 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LV28_12960 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LV28_12820 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LV28_12870 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D LV28_04580 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D LV28_22975 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LV28_12890 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LV28_00655 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D LV28_12915 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LV28_09070 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LV28_05830 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LV28_13080 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LV28_12920 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LV28_12935 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LV28_12930 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LV28_12875 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LV28_12860 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LV28_00660 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D LV28_13075 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LV28_13085 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LV28_13070 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LV28_18425 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LV28_12885 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LV28_12840 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LV28_12900 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LV28_12800 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LV28_12855 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LV28_22990 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LV28_04390 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LV28_11320 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LV28_12910 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LV28_12925 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LV28_12880 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LV28_11315 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LV28_08845 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LV28_12895 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LV28_12845 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LV28_04535 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D LV28_09885 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LV28_08850 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LV28_14465 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LV28_04395 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LV28_17035 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D LV28_07990 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_13130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_19750 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_11535 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_08010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_19730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_11555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_13150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_07995 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_13135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_19745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_11540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ppnm03009] D LV28_09815 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LV28_23015 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D LV28_09810 GTPase Era K03595 era; GTPase D LV28_11310 obgE; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D LV28_15450 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D LV28_00525 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D LV28_20265 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D LV28_13090 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D LV28_00370 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D LV28_10935 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D LV28_15080 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LV28_08880 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LV28_17010 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D LV28_11080 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D LV28_14170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LV28_11490 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D LV28_09900 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LV28_13610 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LV28_15680 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D LV28_00425 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D LV28_06140 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D LV28_08440 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D LV28_15430 23S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D LV28_00365 competence protein ComJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D LV28_18540 DNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D LV28_24310 23S rRNA (adenine(2503)-C2)-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D LV28_24295 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D LV28_00515 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D LV28_09920 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D LV28_03900 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LV28_08985 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D LV28_00955 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D LV28_00855 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D LV28_22980 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D LV28_03865 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D LV28_11210 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D LV28_00900 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D LV28_23605 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D LV28_09925 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D LV28_08475 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D LV28_10565 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D LV28_06390 ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D LV28_23005 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LV28_24340 ribosome-associated GTPase EngA K03977 engA; GTPase D LV28_24350 GTPase HflX K03665 hflX; GTPase D LV28_07645 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LV28_04825 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LV28_00535 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D LV28_00520 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D LV28_04320 RNA-binding protein K14761 rlbA; ribosome-associated protein D LV28_08435 ribosome silencing factor K09710 ybeB; ribosome-associated protein D LV28_06145 RNA-binding protein K07574 yhbY; RNA-binding protein D LV28_23025 hypothetical protein K09889 yjgA; ribosome-associated protein D LV28_17095 ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor D LV28_11720 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase D LV28_09890 metal-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ppnm03016] D LV28_11100 ribonuclease N K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D LV28_15870 cca; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D LV28_24030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LV28_11290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LV28_08895 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LV28_11035 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LV28_21105 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LV28_23145 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D LV28_16440 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LV28_23435 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LV28_18325 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LV28_05730 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LV28_04405 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LV28_21280 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LV28_24070 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LV28_05685 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LV28_24325 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LV28_04385 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LV28_04380 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LV28_18465 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LV28_23575 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LV28_14285 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LV28_18470 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D LV28_04690 Ala-tRNA(Pro) hydrolase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D LV28_12490 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LV28_10460 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D LV28_23845 SAM-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D LV28_23945 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D LV28_00540 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D LV28_15980 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_22435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_23380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_07645 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LV28_09160 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LV28_14445 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D LV28_14175 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LV28_06885 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D LV28_14460 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D LV28_04845 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D LV28_11170 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D LV28_14425 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D LV28_11845 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D LV28_10895 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LV28_10900 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LV28_08535 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D LV28_01145 hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D LV28_24525 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D LV28_10975 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D LV28_10865 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D LV28_24040 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D LV28_22985 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D LV28_16805 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D LV28_01050 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D LV28_18570 mnmA; tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LV28_15900 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D LV28_05695 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D LV28_23390 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D LV28_03355 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D LV28_14385 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D LV28_18750 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D LV28_15105 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D LV28_15115 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D LV28_15110 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D LV28_18225 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D LV28_09130 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D LV28_05125 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D LV28_18745 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D LV28_24085 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D LV28_00850 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D LV28_05590 tRNA threonylcarbamoyl adenosine modification protein TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D LV28_09135 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D LV28_07340 heme biosynthesis protein HemY K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D LV28_00420 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LV28_04575 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ppnm03012] D LV28_00530 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LV28_04400 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LV28_00890 ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D LV28_00980 elongation factor Ts K02357 tsf; elongation factor Ts D LV28_13105 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LV28_12945 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LV28_00215 fusA; elongation factor G K02355 fusA; elongation factor G D LV28_12950 fusA; elongation factor G K02355 fusA; elongation factor G D LV28_22360 translation elongation factor K03833 selB; selenocysteine-specific elongation factor D LV28_11775 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D LV28_00990 ribosome recycling factor K02838 frr; ribosome recycling factor D LV28_11780 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D LV28_17025 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D LV28_11870 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D LV28_12830 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D LV28_09785 elongation factor P K02356 efp; elongation factor P D LV28_23445 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D LV28_01655 peptide chain release factor I K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:ppnm03110] D LV28_08925 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D LV28_00775 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D LV28_03505 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D LV28_15470 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D LV28_23245 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D LV28_22870 heat-shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D LV28_09270 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LV28_23400 molecular chaperone HscA K04044 hscA; molecular chaperone HscA D LV28_20430 heat-shock protein K04046 yegD; hypothetical chaperone protein D LV28_07755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LV28_09265 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D LV28_23395 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D LV28_23540 Hsp33 chaperonin K04083 hslO; molecular chaperone Hsp33 D LV28_09280 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D LV28_02140 hypothetical protein K13993 HSP20; HSP20 family protein D LV28_09290 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D LV28_07760 molecular chaperone GroES K04078 groES; chaperonin GroES D LV28_07610 peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D LV28_09835 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D LV28_06135 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LV28_22875 AAA family ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LV28_14140 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LV28_03230 hypothetical protein K07346 fimC; fimbrial chaperone protein D LV28_16790 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D LV28_14970 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D LV28_24060 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D LV28_24055 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D LV28_24100 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D LV28_08835 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D LV28_23610 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D LV28_03440 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D LV28_02500 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D LV28_13305 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D LV28_19310 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D LV28_10945 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D LV28_24160 thioredoxin K03671 TXN; thioredoxin D LV28_04805 co-chaperone YbbN K05838 ybbN; putative thioredoxin D LV28_16785 glutaredoxin K03676 grxC; glutaredoxin 3 D LV28_11785 glutaredoxin K07390 grxD; monothiol glutaredoxin D LV28_16430 disulfide bond formation protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D LV28_06530 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D LV28_11705 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D LV28_12785 thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D LV28_11655 dihydroneopterin aldolase K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:ppnm04131] D LV28_24305 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D LV28_06570 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D LV28_11060 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LV28_16775 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LV28_07680 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LV28_23245 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:ppnm03051] D LV28_23245 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ppnm03032] D LV28_06285 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LV28_12180 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_24550 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_03495 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LV28_01295 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LV28_04375 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LV28_20890 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LV28_14470 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D LV28_18955 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LV28_00665 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LV28_05560 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D LV28_17340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LV28_08525 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LV28_14475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LV28_20755 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LV28_11025 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LV28_03340 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LV28_06290 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_07935 ethanolamine utilization protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_24165 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LV28_01045 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LV28_05645 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LV28_00945 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LV28_24555 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D LV28_19115 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D LV28_09205 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D LV28_20845 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LV28_23190 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LV28_23175 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LV28_15045 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ppnm03036] D LV28_12180 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_24550 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_09815 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LV28_08665 DNA-binding protein K03746 hns; DNA-binding protein H-NS D LV28_03495 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LV28_01295 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LV28_04375 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LV28_20890 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LV28_14470 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D LV28_03215 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D LV28_10980 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LV28_24345 RNA-binding protein hfq K03666 hfq; host factor-I protein D LV28_22945 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_04900 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_13260 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_14350 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_14295 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_07020 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_22520 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_06965 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_17770 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_17410 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LV28_00930 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D LV28_21070 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D LV28_00510 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D LV28_11430 cell division protein FtsA K03590 ftsA; cell division protein FtsA D LV28_23530 cell division protein FtsB K05589 ftsB; cell division protein FtsB D LV28_06935 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LV28_11480 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D LV28_21265 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LV28_01500 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LV28_11485 cell division protein FtsL K03586 ftsL; cell division protein FtsL D LV28_11435 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D LV28_11455 cell division protein FtsW K03588 ftsW; cell division protein FtsW D LV28_11425 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LV28_20975 cell division protein ZapA K09888 zapA; cell division protein ZapA D LV28_11385 cell division protein ZapD K18778 zapD; cell division protein ZapD D LV28_04070 ATPase K06916 zapE; cell division protein ZapE D LV28_10330 ATPase K06916 zapE; cell division protein ZapE D LV28_09140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D LV28_07525 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system D LV28_03565 septum formation inhibitor K03610 minC; septum site-determining protein MinC D LV28_03560 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D LV28_03555 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D LV28_15625 dihydroorotate oxidase K05501 slmA; TetR/AcrR family transcriptional regulator D LV28_15320 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LV28_15315 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D LV28_15310 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D LV28_15300 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D LV28_14160 chromosome partitioning protein K03496 parA; chromosome partitioning protein D LV28_21055 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D LV28_03055 hypothetical protein K03496 parA; chromosome partitioning protein D LV28_14155 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LV28_23190 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LV28_23175 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LV28_14175 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LV28_14170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LV28_15425 recombinase XerC K03733 xerC; integrase/recombinase XerC D LV28_21115 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D LV28_12775 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ppnm03400] D LV28_23855 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D LV28_23130 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D LV28_11680 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LV28_17070 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D LV28_23310 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LV28_11395 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D LV28_18775 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D LV28_08920 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LV28_05420 deoxyribodipyrimidine photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D LV28_16135 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D LV28_00860 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LV28_24075 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D LV28_23860 adenosine deaminase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D LV28_00360 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LV28_17065 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LV28_00315 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LV28_15650 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LV28_23470 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LV28_00945 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LV28_05645 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LV28_17330 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D LV28_14665 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LV28_09775 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D LV28_16015 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LV28_11950 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LV28_13065 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LV28_13060 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LV28_12805 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LV28_04830 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LV28_03795 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LV28_23620 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LV28_09155 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D LV28_09015 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LV28_05610 exodeoxyribonuclease K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LV28_08525 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LV28_14475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LV28_20755 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D LV28_11025 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LV28_03340 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LV28_06290 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_07935 ethanolamine utilization protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LV28_24165 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LV28_17340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LV28_24555 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D LV28_19115 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D LV28_12185 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D LV28_08610 hypothetical protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D LV28_08600 hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LV28_10630 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D LV28_17570 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LV28_18490 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LV28_18495 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D LV28_13690 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D LV28_00650 primosomal replication protein N K02686 priB; primosomal replication protein N D LV28_00885 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D LV28_18755 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LV28_09805 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D LV28_24175 recR; recombination protein RecR K06187 recR; recombination protein RecR D LV28_09315 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D LV28_03595 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D LV28_08405 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D LV28_17520 hypothetical protein K10979 ku; DNA end-binding protein Ku D LV28_17515 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D LV28_20845 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LV28_03495 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LV28_01295 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D LV28_10980 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LV28_04375 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D LV28_20890 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D LV28_08510 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LV28_08665 DNA-binding protein K03746 hns; DNA-binding protein H-NS D LV28_23115 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D LV28_00590 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D LV28_06450 hypothetical protein K14160 imuA; protein ImuA D LV28_06445 hypothetical protein K14161 imuB; protein ImuB D LV28_06440 DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D LV28_10625 recombinase RecX K03565 recX; regulatory protein D LV28_02095 DNA polymerase III K02347 polX; DNA polymerase (family X) D LV28_13755 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D LV28_03910 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D LV28_11250 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LV28_02085 ribonucleotide reductase-like protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D LV28_11240 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ppnm03029] D LV28_12450 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D LV28_00530 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LV28_04400 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LV28_00980 elongation factor Ts K02357 tsf; elongation factor Ts D LV28_13105 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LV28_12945 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LV28_00215 fusA; elongation factor G K02355 fusA; elongation factor G D LV28_12950 fusA; elongation factor G K02355 fusA; elongation factor G D LV28_09810 GTPase Era K03595 era; GTPase D LV28_18465 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LV28_11035 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LV28_18325 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LV28_16440 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LV28_15330 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LV28_06525 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LV28_01975 hypothetical protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LV28_15340 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LV28_15325 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LV28_22700 endonuclease K01173 ENDOG; endonuclease G, mitochondrial D LV28_17340 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D LV28_01015 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D LV28_22870 heat-shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D LV28_09270 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LV28_09280 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D LV28_07755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LV28_07760 molecular chaperone GroES K04078 groES; chaperonin GroES D LV28_09265 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D LV28_15980 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_22435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_23380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_23395 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D LV28_11785 glutaredoxin K07390 grxD; monothiol glutaredoxin D LV28_21115 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D LV28_16925 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D LV28_16890 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D LV28_16920 cytochrome C oxidase subunit I K02259 COX15; heme a synthase [EC:1.17.99.9] D LV28_14450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D LV28_19810 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D LV28_16910 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D LV28_16930 photosynthetic protein synthase I K07152 SCO1; protein SCO1 D LV28_23245 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ppnm02000] D LV28_08505 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D LV28_18370 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D LV28_03605 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D LV28_02530 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D LV28_21560 macrolide transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D LV28_22390 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D LV28_12635 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D LV28_23170 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D LV28_00595 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D LV28_00600 sulfate transporter K02046 cysU; sulfate/thiosulfate transport system permease protein D LV28_00605 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D LV28_07535 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D LV28_07270 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D LV28_07540 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D LV28_07545 hypothetical protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D LV28_18000 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LV28_02655 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D LV28_17990 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D LV28_02660 ABC transporter permease K15552 tauC; taurine transport system permease protein D LV28_17995 nitrate ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D LV28_23095 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_13795 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_24250 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_09255 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D LV28_13785 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_09250 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_24265 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D LV28_09245 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_24255 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_13790 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D LV28_17275 phosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D LV28_24145 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D LV28_20105 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D LV28_17265 phosphonate ABC transporter permease K02011 afuB; iron(III) transport system permease protein D LV28_23080 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D LV28_20100 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D LV28_17270 amino acid ABC transporter substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LV28_23075 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LV28_20110 ABC transporter substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D LV28_04250 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_05095 branched-chain amino acid ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_06680 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_01425 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_21200 dehydrogenase K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_09670 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D LV28_21640 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_04270 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_05080 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_06670 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_06675 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_09655 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_09165 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_21210 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_01435 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D LV28_21635 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_04275 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_05085 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_09660 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_09180 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D LV28_21645 hypothetical protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_04280 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_05090 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_06665 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_01430 ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_21205 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_09665 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_09170 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D LV28_05535 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein D LV28_05530 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D LV28_05525 proline/glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D LV28_10800 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D LV28_10805 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D LV28_10795 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D LV28_10790 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D LV28_05900 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LV28_16665 myristoyl transferase K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LV28_00380 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LV28_08055 nitrate ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LV28_02750 nitrate ABC transporter permease K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LV28_18045 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LV28_20525 nitrate ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D LV28_10730 sulfonate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_05905 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_16670 sulfonate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_00375 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_20480 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_08060 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_02740 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_18035 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_18030 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D LV28_10735 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_05910 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_00385 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_20475 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_08050 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_02735 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_02665 ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_18040 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_16675 sulfonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D LV28_08445 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D LV28_22065 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D LV28_08450 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D LV28_22070 ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D LV28_08455 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D LV28_22075 ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D LV28_08460 glycerol-3-phosphate ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D LV28_01240 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D LV28_01230 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D LV28_01235 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D LV28_01225 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D LV28_16580 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D LV28_12595 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D LV28_16570 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D LV28_12600 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D LV28_16575 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D LV28_12605 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D LV28_16585 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D LV28_12585 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D LV28_21745 ABC transporter K07323 mlaC; phospholipid transport system substrate-binding protein D LV28_12580 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D LV28_06120 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D LV28_06115 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D LV28_06110 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D LV28_06105 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LV28_17155 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D LV28_17165 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D LV28_17150 phosphonate ABC transporter ATP-binidng protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D LV28_18385 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LV28_15875 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D LV28_18395 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D LV28_18390 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D LV28_18400 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D LV28_24480 cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LV28_24475 ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D LV28_07185 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_20310 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_20690 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_22295 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_22455 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_23035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_04585 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_04905 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_05030 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14930 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_19280 ethanolamine utilization protein EutN K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_06715 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_07785 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_16500 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_15555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_05795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_02885 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_01505 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_10300 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_13715 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_08825 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14225 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_14200 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D LV28_07190 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_03405 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_22475 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_23040 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_05040 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14925 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_19275 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_06725 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_07780 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_15560 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_05790 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_20305 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D LV28_01510 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_08820 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14220 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_14190 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D LV28_19270 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_07775 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_01515 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14185 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08815 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D LV28_14215 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_05035 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_20300 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_15565 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_14920 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_03400 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_23045 amino acid ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D LV28_07195 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_22480 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_06730 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D LV28_03395 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_22465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_23050 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_05045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14915 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_06735 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_15570 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_05780 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_20295 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_14235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_07200 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D LV28_08805 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14230 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14180 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_05775 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_05025 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_20290 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_15575 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_14910 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_03390 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_07770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_23055 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_07205 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_22470 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_06740 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_01520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D LV28_05295 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D LV28_20230 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D LV28_20225 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D LV28_20220 phosphate ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D LV28_15805 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D LV28_15800 urea ABC transporter permease K11960 urtB; urea transport system permease protein D LV28_15795 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D LV28_15790 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D LV28_15785 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D LV28_13625 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D LV28_13620 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D LV28_13615 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D LV28_21495 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_03270 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_17595 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_07405 glutamine ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_21815 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_18055 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_14600 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_15775 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_09455 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_11560 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LV28_17600 amino acid ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_17605 hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_07400 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_18060 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_18065 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_14605 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_14610 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_15765 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_15770 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_09445 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_03265 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D LV28_18075 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D LV28_03260 polar amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D LV28_09450 phosphate ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D LV28_05330 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D LV28_15690 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D LV28_15700 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein D LV28_15705 peptide transporter K12370 dppC; dipeptide transport system permease protein D LV28_15710 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D LV28_15715 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D LV28_22025 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D LV28_22030 glutathione ABC transporter permease K13890 gsiC; glutathione transport system permease protein D LV28_22035 glutathione ABC transporter permease K13891 gsiD; glutathione transport system permease protein D LV28_22020 glutathione ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D LV28_19855 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LV28_07970 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LV28_12080 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LV28_12060 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LV28_07950 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D LV28_19860 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D LV28_19865 diguanylate cyclase K02034 ABC.PE.P1; peptide/nickel transport system permease protein D LV28_07955 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D LV28_12045 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D LV28_19845 dppD; peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D LV28_07960 methionine ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D LV28_07965 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D LV28_24115 peptide ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D LV28_24120 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D LV28_24125 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein D LV28_24130 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D LV28_22380 hypothetical protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D LV28_22385 hypothetical protein K23228 fhuB; ferric hydroxamate transport system permease protein D LV28_22395 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D LV28_14310 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D LV28_14315 heme ABC transporter permease K25133 hmuU; heme transport system permease protein D LV28_14320 hmuV; hemin importer ATP-binding subunit K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D LV28_21020 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D LV28_20990 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D LV28_20995 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D LV28_10860 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D LV28_10855 zinc ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D LV28_10850 hypothetical protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D LV28_20745 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D LV28_20740 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D LV28_17105 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D LV28_16995 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D LV28_17005 nodulation factor ABC transporter ATP-binding protein NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein D LV28_23480 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein D LV28_23485 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D LV28_07060 sugar ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D LV28_11640 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D LV28_12570 metal-dependent hydrolase K01992 ABC-2.P; ABC-2 type transport system permease protein D LV28_05195 mannose-1-phosphate guanyltransferase K01992 ABC-2.P; ABC-2 type transport system permease protein D LV28_07055 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LV28_12575 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LV28_14570 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LV28_05190 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LV28_04735 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D LV28_03470 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LV28_08545 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D LV28_07830 Anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D LV28_04545 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D LV28_22105 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D LV28_01195 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump D LV28_21835 hypothetical protein K02429 fucP; MFS transporter, FHS family, L-fucose permease D LV28_07275 citrate-proton symporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D LV28_21450 citrate-proton symporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D LV28_17580 alpha-ketoglutarate permease K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT D LV28_04200 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D LV28_19405 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D LV28_14705 MFS transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D LV28_01930 transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D LV28_22190 oxalate/formate MFS antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D LV28_10000 oxalate/formate MFS antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D LV28_03025 sugar transporter K08178 JEN; MFS transporter, SHS family, lactate transporter D LV28_20610 glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D LV28_12660 hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D LV28_11990 hypothetical protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter D LV28_21865 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D LV28_21970 glucarate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D LV28_16095 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease D LV28_21535 glucose transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D LV28_17500 hypothetical protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D LV28_17540 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D LV28_05355 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D LV28_20005 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D LV28_05845 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D LV28_19220 MFS transporter K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter D LV28_19930 MFS transporter K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter D LV28_17850 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D LV28_05150 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LV28_02495 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D LV28_00875 MFS transporter K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D LV28_21295 MFS transporter K23677 SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter D LV28_15640 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D LV28_05350 hypothetical protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D LV28_14095 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D LV28_24105 hypothetical protein K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D LV28_10410 MFS transporter K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein D LV28_01630 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D LV28_14775 arabinose transporter permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D LV28_14405 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D LV28_01560 disulfide bond formation protein DsbA K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D LV28_07315 disulfide bond formation protein DsbA K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D LV28_00555 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D LV28_01470 disulfide bond formation protein DsbA K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D LV28_16595 hypothetical protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D LV28_18125 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D LV28_19780 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D LV28_17380 hypothetical protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein D LV28_22560 multidrug MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D LV28_15615 hypothetical protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D LV28_20435 multidrug MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D LV28_14795 Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D LV28_23205 hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D LV28_08240 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D LV28_01970 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D LV28_02255 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D LV28_06605 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D LV28_16760 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LV28_16755 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D LV28_16750 PTS sugar transporter subunit IIB K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LV28_17090 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D LV28_09770 voltage-gated potassium channel TrkA K10716 kch; voltage-gated potassium channel D LV28_09375 ion transporter K10716 kch; voltage-gated potassium channel D LV28_21910 ammonium transporter K03320 amt; ammonium transporter, Amt family D LV28_16730 ammonia channel protein K03320 amt; ammonium transporter, Amt family D LV28_16070 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_01935 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_04295 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_18710 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_14865 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_23795 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_15865 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_17475 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_05915 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D LV28_12440 hypothetical protein K03599 sspA; stringent starvation protein A D LV28_24300 hypothetical protein K19416 yccA; modulator of FtsH protease D LV28_12460 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel D LV28_08420 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D LV28_11140 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D LV28_10785 mechanosensitive ion channel protein MscS K16053 ybdG; miniconductance mechanosensitive channel D LV28_23135 hypothetical protein K08717 utp; urea transporter D LV28_14080 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D LV28_14075 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D LV28_18815 biopolymer transporter K03561 exbB; biopolymer transport protein ExbB D LV28_09020 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D LV28_09025 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D LV28_18810 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D LV28_22635 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D LV28_22630 protein TolR K03560 tolR; biopolymer transport protein TolR D LV28_03205 magnesium transporter K03284 corA; magnesium transporter D LV28_11135 magnesium transporter CorA K03284 corA; magnesium transporter D LV28_08750 magnesium transporter CorA K16074 zntB; zinc transporter D LV28_13290 camphor resistance protein CrcB K06199 crcB; fluoride exporter D LV28_10280 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D LV28_04315 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D LV28_11360 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D LV28_10045 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LV28_08595 magnesium transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D LV28_20840 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D LV28_02335 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D LV28_03240 hypothetical protein K07347 fimD; outer membrane usher protein D LV28_14960 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D LV28_13050 iron transporter K16091 fecA; Fe(3+) dicitrate transport protein D LV28_20985 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D LV28_22405 hypothetical protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D LV28_14300 hypothetical protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D LV28_17690 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LV28_15460 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LV28_01310 ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LV28_07015 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LV28_13160 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D LV28_16190 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D LV28_03655 RND transporter K18903 oprC; outer membrane protein, multidrug efflux system D LV28_01675 RND transporter K18903 oprC; outer membrane protein, multidrug efflux system D LV28_08185 RND transporter K18300 oprN; outer membrane protein, multidrug efflux system D LV28_08210 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D LV28_07515 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D LV28_01015 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D LV28_24335 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D LV28_23590 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC D LV28_03905 competence protein ComL K05807 bamD; outer membrane protein assembly factor BamD D LV28_11045 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE D LV28_21080 hypothetical protein K07278 tamA; translocation and assembly module TamA D LV28_21085 hypothetical protein K09800 tamB; translocation and assembly module TamB D LV28_07595 hypothetical protein K21449 ata; trimeric autotransporter adhesin D LV28_24900 hypothetical protein K21449 ata; trimeric autotransporter adhesin D LV28_24905 hypothetical protein K21449 ata; trimeric autotransporter adhesin D LV28_02260 hypothetical protein K21449 ata; trimeric autotransporter adhesin D LV28_17110 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D LV28_17115 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D LV28_10950 hypothetical protein K04744 lptD; LPS-assembly protein D LV28_11030 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D LV28_03065 hypothetical protein K20543 bcsC; cellulose synthase operon protein C D LV28_15235 hypothetical protein K13285 sipB; invasin B D LV28_15245 hypothetical protein K13287 sipD; invasin D D LV28_13385 hypothetical protein K15344 sseB; secreted effector protein SseB D LV28_13375 hypothetical protein K15345 sseC; secreted effector protein SseC D LV28_10885 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D LV28_15660 Holin-like protein CidA K06518 cidA; holin-like protein D LV28_17760 aromatic amino acid transporter K11734 aroP; aromatic amino acid transport protein AroP D LV28_17985 GABA permease K11735 gabP; GABA permease D LV28_02640 proY; proline-specific permease K16234 hutT; histidine transporter D LV28_03650 transporter K18902 bpeF; multidrug efflux pump D LV28_03010 multidrug transporter AcrB K18303 mexK; multidrug efflux pump D LV28_07520 multidrug transporter K18138 acrB; multidrug efflux pump D LV28_08635 multidrug transporter K07788 mdtB; multidrug efflux pump D LV28_08630 multidrug transporter K07789 mdtC; multidrug efflux pump D LV28_08290 multidrug transporter K03297 emrE; small multidrug resistance pump D LV28_04745 molecular chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE D LV28_24515 acetylserine transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D LV28_07735 ABC transporter permease K15269 pecM; probable blue pigment (indigoidine) exporter D LV28_22095 chemotaxis protein K05786 rarD; chloramphenicol-sensitive protein RarD D LV28_06990 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D LV28_18530 permease DsdX K03299 TC.GNTP; gluconate:H+ symporter, GntP family D LV28_21505 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D LV28_17720 L-lactate permease K03303 lutP; lactate permease D LV28_00335 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter D LV28_13710 proline:sodium symporter PutP K11928 putP; sodium/proline symporter D LV28_18865 cation acetate symporter K14393 actP; cation/acetate symporter D LV28_06190 C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D LV28_16680 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D LV28_21130 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D LV28_18270 hypothetical protein K24163 nhaK; monovalent cation/hydrogen antiporter D LV28_10240 NAD(P)H dehydrogenase K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF D LV28_17130 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter D LV28_06510 potassium transporter K26735 KEA4_5_6; K+:H+ antiporter D LV28_25085 hypothetical protein K26731 CHX; K+:H+ antiporter D LV28_13325 pyrimidine utilization transport protein G K09016 rutG; putative pyrimidine permease RutG D LV28_01210 purine permease K24206 uacT; uric acid transporter D LV28_06435 purine permease K24206 uacT; uric acid transporter D LV28_06360 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D LV28_06560 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D LV28_23270 hypothetical protein K05782 benE; benzoate membrane transport protein D LV28_14390 chloride channel protein K03281 clcA; chloride channel protein, CIC family D LV28_05705 chloride channel protein K03281 clcA; chloride channel protein, CIC family D LV28_20010 chloride channel protein K03281 clcA; chloride channel protein, CIC family D LV28_16005 voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family D LV28_06910 chromate transporter K07240 chrA; chromate transporter D LV28_06915 chromate transporter K07240 chrA; chromate transporter D LV28_09585 chromate transporter K07240 chrA; chromate transporter D LV28_09580 hypothetical protein K07240 chrA; chromate transporter D LV28_06455 divalent metal cation transporter K03322 mntH; manganese transport protein D LV28_20875 divalent metal cation transporter K03322 mntH; manganese transport protein D LV28_20805 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit D LV28_04455 C4-dicarboxylate ABC transporter K21395 yiaO; TRAP-type transport system periplasmic protein D LV28_20055 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D LV28_08330 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D LV28_17295 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D LV28_01820 arsenic transporter K03325 ACR3; arsenite transporter D LV28_09065 murein biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D LV28_00180 transporter K13936 mdcF; malonate transporter and related proteins D LV28_03930 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D LV28_16975 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D LV28_10055 amino acid transporter K05834 rhtB; homoserine/homoserine lactone efflux protein D LV28_10345 lysine transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein D LV28_23345 threonine transporter K05835 rhtC; threonine efflux protein D LV28_07255 lysine transporter LysE K05835 rhtC; threonine efflux protein D LV28_10085 hypothetical protein K05835 rhtC; threonine efflux protein D LV28_06165 leucine efflux protein K11250 leuE; leucine efflux protein D LV28_04125 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D LV28_04130 branched-chain amino acid transporter K26606 azlD; branched chain amino acid efflux pump D LV28_07690 branched-chain amino acid transporter K26606 azlD; branched chain amino acid efflux pump D LV28_04170 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D LV28_12530 hypothetical protein K05595 marC; multiple antibiotic resistance protein D LV28_11455 cell division protein FtsW K03588 ftsW; cell division protein FtsW D LV28_06570 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D LV28_09420 FTR1 family iron permease K07243 FTR; high-affinity iron transporter D LV28_14580 nickel/cobalt efflux protein RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein D LV28_18820 hypothetical protein K03832 tonB; periplasmic protein TonB D LV28_11165 hypothetical protein K03832 tonB; periplasmic protein TonB D LV28_13655 hypothetical protein K03832 tonB; periplasmic protein TonB D LV28_22615 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D LV28_22625 hypothetical protein K03646 tolA; colicin import membrane protein D LV28_22620 translocation protein TolB K03641 tolB; TolB protein D LV28_12085 hypothetical protein K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D LV28_02520 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D LV28_02515 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D LV28_02505 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D LV28_00560 hemolysin D K03543 emrA; membrane fusion protein, multidrug efflux system D LV28_07310 multidrug ABC transporter permease K03543 emrA; membrane fusion protein, multidrug efflux system D LV28_03645 RND transporter MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D LV28_03005 RND transporter MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D LV28_08220 multidrug transporter K18094 mexX; membrane fusion protein, multidrug efflux system D LV28_07525 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system D LV28_08645 multidrug transporter K07799 mdtA; membrane fusion protein, multidrug efflux system D LV28_21555 hemolysin secretion protein D K13888 macA; membrane fusion protein, macrolide-specific efflux system D LV28_17635 iron transporter K04758 feoA; ferrous iron transport protein A D LV28_17630 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D LV28_16455 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D LV28_23120 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D LV28_01205 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D LV28_16150 hypothetical protein K07245 pcoD; copper resistance protein D D LV28_16155 hypothetical protein K07156 copC; copper resistance protein C D LV28_20135 hypothetical protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:ppnm02044] D LV28_15930 hypothetical protein K02453 gspD; general secretion pathway protein D D LV28_15955 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D LV28_15375 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D LV28_15920 type II secretion system protein G K02456 gspG; general secretion pathway protein G D LV28_15925 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G D LV28_15970 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D LV28_11375 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_15385 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_25175 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_10595 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D LV28_11365 secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D LV28_11370 hypothetical protein K02653 pilC; type IV pilus assembly protein PilC D LV28_24915 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ D LV28_07500 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D LV28_25000 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D LV28_23940 hypothetical protein K08086 fimV; pilus assembly protein FimV D LV28_03995 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D LV28_03985 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D LV28_02380 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D LV28_03980 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D LV28_02370 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D LV28_03975 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D LV28_03970 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D LV28_03965 hypothetical protein K12510 tadB; tight adherence protein B D LV28_02360 secretion system protein F K12510 tadB; tight adherence protein B D LV28_03960 pilus assembly protein TadC K12511 tadC; tight adherence protein C D LV28_02355 secretion system protein F K12511 tadC; tight adherence protein C D LV28_25110 hypothetical protein K27079 tadD; tight adherence protein D D LV28_03945 hypothetical protein K27080 tadG; tight adherence protein G D LV28_04005 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D LV28_22000 hypothetical protein K02221 yggT; YggT family protein D LV28_23500 hypothetical protein K02238 comEC; competence protein ComEC D LV28_19555 hypothetical protein K03219 yscC; type III secretion protein C D LV28_18635 hypothetical protein K03219 yscC; type III secretion protein C D LV28_18630 hypothetical protein K03220 yscD; type III secretion protein D D LV28_19480 hypothetical protein K03220 yscD; type III secretion protein D D LV28_18585 hypothetical protein K03221 yscF; type III secretion protein F D LV28_15135 hypothetical protein K03221 yscF; type III secretion protein F D LV28_19470 hypothetical protein K03221 yscF; type III secretion protein F D LV28_19620 hypothetical protein K04053 yscI; type III secretion protein I D LV28_19615 hypothetical protein K03222 yscJ; type III secretion protein J D LV28_25510 hypothetical protein K03222 yscJ; type III secretion protein J D LV28_19605 hypothetical protein K03223 yscL; type III secretion protein L D LV28_18660 type III secretion protein ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D LV28_19600 fliI; type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D LV28_19595 hypothetical protein K04056 yscO; type III secretion protein O D LV28_15205 hypothetical protein K03225 yscQ; type III secretion protein Q D LV28_19585 hypothetical protein K03225 yscQ; type III secretion protein Q D LV28_18680 ssaR; type III secretion system protein SsaR K03226 yscR; type III secretion protein R D LV28_19580 ssaR; type III secretion system protein SsaR K03226 yscR; type III secretion protein R D LV28_18685 type III secretion system protein SsaS K03227 yscS; type III secretion protein S D LV28_19575 hypothetical protein K03227 yscS; type III secretion protein S D LV28_18690 type III secretion protein K03228 yscT; type III secretion protein T D LV28_19570 hypothetical protein K03228 yscT; type III secretion protein T D LV28_19565 type III secretion protein K03229 yscU; type III secretion protein U D LV28_18655 secretion system apparatus protein SsaV K03230 yscV; type III secretion protein V D LV28_15185 type III secretion system protein InvA K03230 yscV; type III secretion protein V D LV28_19490 Low calcium response locus protein D K03230 yscV; type III secretion protein V D LV28_15175 hypothetical protein K22504 invG; type III secretion system outer membrane ring protein D LV28_15190 ATP synthase K22506 spaL; type III secretion system ATPase [EC:7.4.2.8] D LV28_15210 type III secretion system protein K22507 spaP; type III secretion system export apparatus protein D LV28_15215 type III secretion system protein SpaQ K22508 spaQ; type III secretion system export apparatus protein D LV28_15220 hypothetical protein K22509 spaR; type III secretion system export apparatus protein D LV28_15180 hypothetical protein K22511 invE; type III secretion system protein D LV28_25505 hypothetical protein K22512 spaK; type III secretion system chaperone D LV28_15195 hypothetical protein K22513 spaM; type III secretion system protein D LV28_15130 hypothetical protein K22488 prgH; type III secretion system protein D LV28_25580 hypothetical protein K22487 prgJ; type III secretion system protein D LV28_14010 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D LV28_14015 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D LV28_13845 hypothetical protein K04061 flhB2; flagellar biosynthesis protein D LV28_13855 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D LV28_13865 hypothetical protein K02411 fliH; flagellar assembly protein FliH D LV28_13870 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D LV28_13895 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D LV28_13900 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D LV28_13905 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D LV28_13910 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D LV28_13915 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D LV28_11705 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D LV28_03230 hypothetical protein K07346 fimC; fimbrial chaperone protein D LV28_03240 hypothetical protein K07347 fimD; outer membrane usher protein D LV28_03245 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D LV28_03225 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D LV28_11410 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LV28_16790 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D LV28_18735 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D LV28_13095 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D LV28_18730 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D LV28_23650 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LV28_12835 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D LV28_11275 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LV28_16980 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D LV28_18740 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D LV28_14450 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D LV28_12485 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D LV28_12480 tatB; preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D LV28_12475 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ppnm02042] D LV28_11360 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D LV28_10045 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LV28_08595 magnesium transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D LV28_03290 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ppnm02022] D LV28_06090 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D LV28_06095 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D LV28_08660 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_03770 histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_08760 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D LV28_08655 ompR; two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D LV28_03765 two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D LV28_17365 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D LV28_01670 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D LV28_04750 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D LV28_09235 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D LV28_13805 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D LV28_09240 two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D LV28_13800 two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D LV28_01865 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_07620 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_20125 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_01705 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_21570 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D LV28_10635 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D LV28_02680 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D LV28_20130 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D LV28_01710 XRE family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D LV28_01870 XRE family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D LV28_07845 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D LV28_07625 XRE family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D LV28_15015 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D LV28_03170 hypothetical protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D LV28_08620 hypothetical protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D LV28_03175 hypothetical protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D LV28_13815 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D LV28_15020 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D LV28_00290 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D LV28_00295 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D LV28_15090 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D LV28_15095 XRE family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D LV28_02935 hypothetical protein K07713 zraR; two-component system, NtrC family, response regulator HydG D LV28_16685 ATPase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D LV28_16690 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D LV28_14065 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LV28_19920 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14025 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14070 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14030 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D LV28_14850 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D LV28_14860 diguanylate cyclase response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D LV28_14855 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D LV28_15480 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D LV28_15475 two-component system response regulator K15012 regA; two-component system, response regulator RegA D LV28_08105 nitrate ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor D LV28_08110 histidine kinase K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D LV28_10140 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS C 02035 Bacterial motility proteins [BR:ppnm02035] D LV28_14065 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D LV28_14060 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D LV28_11830 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D LV28_14035 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D LV28_11825 hypothetical protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D LV28_14040 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D LV28_11820 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D LV28_14030 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D LV28_19920 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14025 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14070 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D LV28_14020 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D LV28_14045 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_11815 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_00220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_20165 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_14555 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D LV28_04105 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_03300 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_14050 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D LV28_04705 chemotaxis protein K03776 aer; aerotaxis receptor D LV28_14055 hypothetical protein K03776 aer; aerotaxis receptor D LV28_13865 hypothetical protein K02411 fliH; flagellar assembly protein FliH D LV28_13870 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D LV28_13875 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D LV28_13900 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D LV28_13905 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D LV28_13910 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D LV28_13915 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D LV28_14010 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D LV28_14015 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D LV28_13860 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D LV28_13890 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D LV28_13895 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D LV28_13855 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D LV28_13935 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D LV28_13975 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D LV28_13940 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D LV28_13885 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D LV28_13850 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D LV28_24885 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D LV28_13970 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D LV28_13965 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D LV28_13960 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D LV28_13950 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D LV28_13945 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D LV28_13930 flgJ; flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D LV28_13955 flgE; flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D LV28_13925 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D LV28_13920 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D LV28_13985 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D LV28_13820 hypothetical protein K02406 fliC; flagellin D LV28_13825 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D LV28_13830 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D LV28_13835 hypothetical protein K02423 fliT; flagellar protein FliT D LV28_14090 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D LV28_14085 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D LV28_13995 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA D LV28_14080 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D LV28_14075 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D LV28_24480 cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D LV28_13980 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D LV28_14005 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D LV28_14000 hypothetical protein K04562 flhG; flagellar biosynthesis protein FlhG D LV28_10595 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D LV28_11365 secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D LV28_11370 hypothetical protein K02653 pilC; type IV pilus assembly protein PilC D LV28_11375 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_15385 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_25175 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LV28_24915 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ D LV28_07500 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D LV28_04005 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D LV28_03995 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D LV28_03985 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D LV28_02380 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D LV28_03980 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D LV28_02370 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D LV28_03975 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D LV28_03970 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D LV28_03230 hypothetical protein K07346 fimC; fimbrial chaperone protein D LV28_03240 hypothetical protein K07347 fimD; outer membrane usher protein D LV28_03245 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D LV28_03225 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ppnm04812] D LV28_15320 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LV28_15240 hypothetical protein K13286 sipC; invasin C D LV28_11425 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LV28_11430 cell division protein FtsA K03590 ftsA; cell division protein FtsA D LV28_03565 septum formation inhibitor K03610 minC; septum site-determining protein MinC D LV28_03560 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D LV28_03555 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D LV28_14160 chromosome partitioning protein K03496 parA; chromosome partitioning protein D LV28_21055 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D LV28_03055 hypothetical protein K03496 parA; chromosome partitioning protein D LV28_14155 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ppnm04147] D LV28_23245 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D LV28_23525 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LV28_11060 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LV28_07685 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LV28_07680 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LV28_24060 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D LV28_21660 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D LV28_07755 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LV28_22870 heat-shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D LV28_09270 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D LV28_03465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LV28_01095 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LV28_13105 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LV28_12945 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D LV28_12490 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LV28_01410 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LV28_08545 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D LV28_07335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_05050 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_03545 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_11995 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_09120 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D LV28_08320 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_17390 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_16380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03855 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_03880 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_14895 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LV28_15670 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D LV28_09045 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LV28_17135 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D LV28_18070 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LV28_21135 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D LV28_16050 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D LV28_18445 methionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D LV28_21875 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D LV28_18145 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D LV28_03155 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D LV28_06630 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D LV28_05225 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D LV28_00285 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LV28_12780 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D LV28_17765 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D LV28_14360 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D LV28_15000 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D LV28_10985 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D LV28_23010 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D LV28_04075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_24425 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D LV28_21945 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D LV28_20965 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D LV28_18380 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D LV28_20400 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LV28_23645 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LV28_16775 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LV28_02020 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein D LV28_02045 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein D LV28_14165 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:ppnm02048] D LV28_24555 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D LV28_19115 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D LV28_12340 DNA methylase N-4 K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D LV28_23960 DNA methylase N-4 K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D LV28_12180 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_24550 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D LV28_25350 hypothetical protein K07448 mrr; restriction system protein D LV28_01645 regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D LV28_11425 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LV28_15320 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LV28_23190 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LV28_23175 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LV28_24030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D LV28_23905 hypothetical protein K09159 cptB; antitoxin CptB D LV28_15980 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_22435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LV28_23380 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:ppnm04052] D LV28_07510 acyl-CoA-binding protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein) C 04515 Cell adhesion molecules C 04090 CD molecules [BR:ppnm04090] C 01504 Antimicrobial resistance genes [BR:ppnm01504] D LV28_08570 hypothetical protein K19211 blaOXA-62; beta-lactamase class D OXA-62 [EC:3.5.2.6] D LV28_24105 hypothetical protein K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D LV28_10410 MFS transporter K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein D LV28_19780 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D LV28_24970 hypothetical protein K02172 blaR1; bla regulator protein blaR1 D LV28_09520 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D LV28_09535 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LV28_17365 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D LV28_01670 two-component system response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D LV28_13335 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D LV28_07525 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system D LV28_07520 multidrug transporter K18138 acrB; multidrug efflux pump D LV28_08210 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D LV28_07515 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system D LV28_08185 RND transporter K18300 oprN; outer membrane protein, multidrug efflux system D LV28_03005 RND transporter MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D LV28_03010 multidrug transporter AcrB K18303 mexK; multidrug efflux pump D LV28_08220 multidrug transporter K18094 mexX; membrane fusion protein, multidrug efflux system D LV28_03635 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D LV28_25030 hypothetical protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D LV28_03645 RND transporter MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D LV28_03650 transporter K18902 bpeF; multidrug efflux pump D LV28_03655 RND transporter K18903 oprC; outer membrane protein, multidrug efflux system D LV28_01675 RND transporter K18903 oprC; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:ppnm00536] D LV28_06055 hypothetical protein K15125 fhaB; filamentous hemagglutinin D LV28_19315 hypothetical protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ppnm00537] D LV28_06180 treF; trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D LV28_21660 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ppnm03100] D LV28_13525 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_04570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_07135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_11945 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_08000 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_11545 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_19740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_13140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LV28_07325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_07330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_08280 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_13770 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_05810 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LV28_09990 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LV28_09995 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LV28_03485 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LV28_04555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LV28_04560 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LV28_09750 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LV28_17045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LV28_04565 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LV28_11940 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LV28_07130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LV28_09755 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LV28_09760 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LV28_10395 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LV28_13115 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LV28_24530 tRNA-His K14226 tRNA-His; tRNA His D LV28_08005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LV28_11550 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LV28_13145 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LV28_19735 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LV28_23655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_14550 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_20680 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_09570 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_00405 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_00415 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_03740 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LV28_00245 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LV28_00250 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LV28_00255 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LV28_22600 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LV28_10650 tRNA-Met K14230 tRNA-Met; tRNA Met D LV28_08070 tRNA-Met K14230 tRNA-Met; tRNA Met D LV28_24505 tRNA-Met K14230 tRNA-Met; tRNA Met D LV28_05545 tRNA-Met K14230 tRNA-Met; tRNA Met D LV28_15100 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LV28_04150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LV28_11330 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LV28_06065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LV28_04865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LV28_24095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LV28_18870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LV28_21285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LV28_12430 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LV28_13110 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LV28_06635 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LV28_13100 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LV28_13120 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LV28_06295 tRNA-Val K14237 tRNA-Val; tRNA Val D LV28_04410 tRNA-Val K14237 tRNA-Val; tRNA Val D LV28_16085 tRNA-Val K14237 tRNA-Val; tRNA Val D LV28_03490 tRNA-Val K14237 tRNA-Val; tRNA Val D LV28_22365 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D LV28_08010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_19730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_11555 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_13150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LV28_07995 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_13135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_19745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_11540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LV28_07990 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_13130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_19750 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LV28_11535 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D LV28_02895 3-hydroxyacyl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D LV28_21730 NAD-dependent dehydratase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219] D LV28_21790 short-chain dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320] D LV28_18010 dkgB; 2,5-diketo-D-gluconic acid reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D LV28_21515 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D LV28_15400 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D LV28_05505 carnitine dehydratase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-] D LV28_14290 pyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D LV28_13270 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D LV28_01765 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D LV28_03370 2-alkenal reductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D LV28_02465 aldehyde dehydrogenase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D LV28_18255 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D LV28_11005 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D LV28_18250 carbon monoxide dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D LV28_08380 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D LV28_03710 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D LV28_23640 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D LV28_00490 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D LV28_07805 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D LV28_08275 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D LV28_11690 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D LV28_20040 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D LV28_07385 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D LV28_07860 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D LV28_03420 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D LV28_07850 hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D LV28_23760 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D LV28_17745 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D LV28_10365 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D LV28_00160 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D LV28_12755 sulfoxide reductase catalytic subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D LV28_17750 hypothetical protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D LV28_00700 alkyl hydroperoxide reductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LV28_03285 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LV28_11220 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LV28_07470 peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LV28_20035 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D LV28_07005 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D LV28_13185 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D LV28_03780 carboxymuconolactone decarboxylase K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D LV28_03775 alkyl hydroperoxide reductase K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D LV28_01690 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D LV28_09490 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D LV28_16165 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D LV28_11685 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D LV28_18805 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D LV28_07250 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91] D LV28_24110 aspartyl beta-hydroxylase K22616 olsC; ornithine lipid ester-linked acyl 2-hydroxylase [EC:1.14.11.58] D LV28_14965 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D LV28_06655 flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D LV28_05510 luciferase K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-] D LV28_16185 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3] D LV28_21710 hypothetical protein K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D LV28_01305 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D LV28_20950 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D LV28_13645 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D LV28_01825 hypothetical protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D LV28_23805 short-chain dehydrogenase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-] D LV28_24275 hypothetical protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D LV28_10490 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D LV28_07355 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D LV28_02040 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D LV28_02060 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D LV28_02965 trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D LV28_10320 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D LV28_10890 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D LV28_24510 GCN5 family acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D LV28_07890 acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D LV28_24495 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D LV28_24490 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D LV28_04945 glycosyl transferase K13670 pimF; putative glycosyltransferase [EC:2.4.-.-] D LV28_21705 squalene synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103] D LV28_20785 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D LV28_21510 Hrp-dependent type III effector protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D LV28_20075 hypothetical protein K23247 oiaK; 3-oxoisoapionate kinase [EC:2.7.1.231] D LV28_01055 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D LV28_09320 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D LV28_03415 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D LV28_16390 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D LV28_17085 serine kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D LV28_22200 formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D LV28_22210 formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D LV28_24245 CoA-transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D LV28_22055 hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D LV28_16800 RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D LV28_03735 hypothetical protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D LV28_16265 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D LV28_22640 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D LV28_04450 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D LV28_23560 phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D LV28_06070 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D LV28_14790 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D LV28_03335 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LV28_23490 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LV28_10680 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LV28_03070 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D LV28_13340 hypothetical protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D LV28_18140 N-carbamoyl-D-amino-acid hydrolase K01459 E3.5.1.77; N-carbamoyl-D-amino-acid hydrolase [EC:3.5.1.77] D LV28_04990 N-carbamoyl-D-amino-acid hydrolase K01459 E3.5.1.77; N-carbamoyl-D-amino-acid hydrolase [EC:3.5.1.77] D LV28_18200 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D LV28_04910 hypothetical protein K01462 PDF; peptide deformylase [EC:3.5.1.88] D LV28_15060 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LV28_00950 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LV28_09340 acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D LV28_05515 3-oxoadipate enol-lactone hydrolase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-] D LV28_01215 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D LV28_12110 enamine deaminase RidA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D LV28_05920 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D LV28_20545 translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D LV28_17310 enamine deaminase RidA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D LV28_09895 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D LV28_20070 ribulose 1,5-bisphosphate carboxylase K01559 oiaT; 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase [EC:3.7.1.28] D LV28_21390 mandelate racemase K22209 tarD; D(-)-tartrate dehydratase [EC:4.2.1.81] D LV28_17420 PLP-dependent lyase/thiolase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D LV28_05000 PLP-dependent lyase/thiolase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D LV28_17315 serine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D LV28_13660 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D LV28_19950 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D LV28_02880 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D LV28_01440 AMP-dependent synthetase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D LV28_03610 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D LV28_03615 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D LV28_11180 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D LV28_23315 ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D LV28_01840 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D LV28_01285 hypothetical protein K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D LV28_20375 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] D LV28_22420 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D LV28_24465 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE D LV28_17715 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE D LV28_24470 (Fe-S)-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D LV28_17710 4Fe-4S ferredoxin K18929 lldF; L-lactate dehydrogenase complex protein LldF D LV28_17705 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG D LV28_09975 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D LV28_01365 formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein D LV28_23405 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D LV28_09985 ferredoxin K05524 fdxA; ferredoxin D LV28_23385 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins D LV28_21445 tcuB; tricarballylate utilization protein B K13795 citB; citrate/tricarballylate utilization protein D LV28_21440 tricarballylate dehydrogenase K13796 cobZ; tricarballylate dehydrogenase D LV28_21940 electron transporter RnfB K03521 fixA; electron transfer flavoprotein beta subunit D LV28_20960 electron transporter RnfB K03521 fixA; electron transfer flavoprotein beta subunit D LV28_20420 hypothetical protein K09165 K09165; dodecin D LV28_21465 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D LV28_15395 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D LV28_10815 lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein D LV28_09400 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D LV28_20900 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D LV28_20905 N-acetylglucosaminyl transferase K19804 lapB; lipopolysaccharide assembly protein B D LV28_03075 hypothetical protein K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D LV28_21160 heme biosynthesis protein HemY K02498 hemY; HemY protein D LV28_18300 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D LV28_18295 sterol-binding protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D LV28_16715 phosphoheptose isomerase K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism D LV28_03125 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D LV28_06205 hypothetical protein K15977 K15977; putative oxidoreductase D LV28_14975 GntR family transcriptional regulator K15977 K15977; putative oxidoreductase D LV28_10030 LysR family transcriptional regulator K15977 K15977; putative oxidoreductase D LV28_02850 esterase K06999 K06999; phospholipase/carboxylesterase D LV28_03210 GCN5 family acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D LV28_04155 cold-shock protein K03704 cspA; cold shock protein D LV28_00165 cold-shock protein K03704 cspA; cold shock protein D LV28_10065 cold-shock protein K03704 cspA; cold shock protein D LV28_08935 cold-shock protein K03704 cspA; cold shock protein D LV28_16725 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D LV28_03925 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D LV28_11635 multidrug ABC transporter ATP-binding protein K13926 rbbA; ribosome-dependent ATPase D LV28_02245 mRNA 3'-end processing factor K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D LV28_08930 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D LV28_03515 trigger factor K03545 tig; trigger factor D LV28_12750 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D LV28_22350 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D LV28_15735 urease accessory protein UreE K03187 ureE; urease accessory protein D LV28_15730 urease accessory protein UreF K03188 ureF; urease accessory protein D LV28_15725 urease accessory protein UreG K03189 ureG; urease accessory protein D LV28_15780 urease accessory protein UreD K03190 ureD; urease accessory protein D LV28_15750 urease accessory protein UreJ K03192 ureJ; urease accessory protein D LV28_01075 SsrA-binding protein K03664 smpB; SsrA-binding protein D LV28_16710 ATP-dependent protease K07391 comM; magnesium chelatase family protein D LV28_01190 peptidase K07395 K07395; putative proteasome-type protease D LV28_16125 protein-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase D LV28_18420 peroxiredoxin K07397 yhfA; putative redox protein D LV28_18800 osmotically inducible protein OsmC K07397 yhfA; putative redox protein D LV28_02310 osmotically inducible protein C K07397 yhfA; putative redox protein D LV28_12765 cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D LV28_06550 xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D LV28_07575 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D LV28_13380 type III secretion protein K15368 sscA; secretion system chaperone SscA C 99976 Replication and repair D LV28_08840 hypothetical protein K03630 radC; DNA repair protein RadC D LV28_09960 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC D LV28_13605 hypothetical protein K07460 yraN; putative endonuclease D LV28_15055 hypothetical protein K04096 smf; DNA processing protein D LV28_20660 hypothetical protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D LV28_24290 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease D LV28_22910 transposase K07483 K07483; transposase D LV28_19380 transposase K07483 K07483; transposase D LV28_19765 transposase K07483 K07483; transposase D LV28_06010 transposase K07483 K07483; transposase D LV28_06045 transposase K07483 K07483; transposase D LV28_19335 transposase K07483 K07483; transposase D LV28_22900 transposase K07483 K07483; transposase D LV28_12675 transposase K07491 rayT; REP-associated tyrosine transposase D LV28_10655 transposase K07493 K07493; putative transposase D LV28_20670 transposase K07493 K07493; putative transposase D LV28_19395 transposase K07493 K07493; putative transposase D LV28_14485 Hin recombinase K07497 K07497; putative transposase D LV28_05975 integrase K07497 K07497; putative transposase D LV28_19320 integrase K07497 K07497; putative transposase D LV28_05985 transposase K07497 K07497; putative transposase D LV28_22845 transposase K07497 K07497; putative transposase D LV28_05970 transposase K07497 K07497; putative transposase D LV28_19360 transposase K07497 K07497; putative transposase D LV28_19325 transposase K07497 K07497; putative transposase D LV28_22850 transposase K07497 K07497; putative transposase D LV28_19155 transposase K07497 K07497; putative transposase D LV28_19150 transposase K07497 K07497; putative transposase D LV28_14490 hypothetical protein K07497 K07497; putative transposase D LV28_06050 transposase K07497 K07497; putative transposase D LV28_06015 transposase K07497 K07497; putative transposase D LV28_05980 transposase K07497 K07497; putative transposase D LV28_19760 integrase K07497 K07497; putative transposase D LV28_19755 transposase K07497 K07497; putative transposase D LV28_19375 integrase K07497 K07497; putative transposase D LV28_19340 transposase K07497 K07497; putative transposase D LV28_22915 integrase K07497 K07497; putative transposase D LV28_22905 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D LV28_24170 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D LV28_08360 hypothetical protein K03285 TC.GBP; general bacterial porin, GBP family D LV28_24935 hypothetical protein K03285 TC.GBP; general bacterial porin, GBP family D LV28_02715 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D LV28_10230 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LV28_00675 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D LV28_17955 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D LV28_10115 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D LV28_18310 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D LV28_01390 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D LV28_13720 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D LV28_13310 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D LV28_22120 aspartate-alanine antiporter K07085 K07085; putative transport protein D LV28_22115 aspartate-alanine antiporter K07085 K07085; putative transport protein C 99978 Cell growth D LV28_03430 septation protein A K06190 ispZ; intracellular septation protein D LV28_10820 SpoVR family protein K06415 spoVR; stage V sporulation protein R C 99993 Cell motility C 99995 Signaling proteins D LV28_15025 carbon starvation protein A K06200 cstA; carbon starvation protein D LV28_00575 GTP-binding protein TypA K06207 typA; GTP-binding protein D LV28_03665 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D LV28_10870 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D LV28_00695 phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase D LV28_10830 serine protein kinase PrkA K07180 prkA; serine protein kinase D LV28_09105 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D LV28_21270 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D LV28_17055 hypothetical protein K02494 lolB; outer membrane lipoprotein LolB D LV28_12590 ABC transporter K04754 mlaA; phospholipid-binding lipoprotein MlaA D LV28_11230 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D LV28_01020 outer membrane protein chaperone K06142 hlpA; outer membrane protein D LV28_24280 peptidase K06194 nlpD; lipoprotein NlpD D LV28_17700 hypothetical protein K07275 ompW; outer membrane protein D LV28_12685 hypothetical protein K07275 ompW; outer membrane protein D LV28_12680 hypothetical protein K07275 ompW; outer membrane protein D LV28_07345 hypothetical protein K07290 yhjG; AsmA family protein D LV28_05185 secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein D LV28_11630 hemolysin D K01993 ABC-2.TX; HlyD family secretion protein D LV28_00240 3-hydroxyisobutyrate dehydrogenase K04062 osmB; osmotically inducible lipoprotein OsmB D LV28_06770 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D LV28_24315 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D LV28_06100 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein D LV28_17855 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D LV28_10080 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D LV28_12790 cytochrome C biogenesis protein K03926 cutA; periplasmic divalent cation tolerance protein D LV28_17195 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D LV28_11605 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D LV28_12740 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D LV28_20600 pyridine nucleotide-disulfide oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D LV28_14305 heme ABC transporter K07225 hmuS; putative hemin transport protein B B 09194 Poorly characterized C 99996 General function prediction only D LV28_25320 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D LV28_19085 hypothetical protein K03791 K03791; putative chitinase D LV28_22315 mammalian cell entry protein K06192 pqiB; paraquat-inducible protein B D LV28_23165 acetyltransferase K02348 elaA; ElaA protein D LV28_01620 cation transport regulator ChaB K06197 chaB; cation transport regulator D LV28_01605 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D LV28_24020 tRNA-binding protein K06878 K06878; tRNA-binding protein D LV28_04730 cyanoglobin K06886 glbN; hemoglobin D LV28_00770 Globin K06886 glbN; hemoglobin D LV28_17660 alpha/beta hydrolase K07001 K07001; NTE family protein D LV28_24140 esterase K07001 K07001; NTE family protein D LV28_16515 Patatin K07001 K07001; NTE family protein D LV28_11835 hypothetical protein K07001 K07001; NTE family protein D LV28_09095 alpha/beta hydrolase K07001 K07001; NTE family protein D LV28_18440 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D LV28_08020 hypothetical protein K07038 K07038; inner membrane protein D LV28_22665 hypothetical protein K07100 K07100; putative phosphoribosyl transferase D LV28_02100 phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase D LV28_08530 rhodanese superfamily protein K07146 K07146; UPF0176 protein D LV28_07050 hypothetical protein K04750 phnB; PhnB protein D LV28_05010 extradiol dioxygenase K04750 phnB; PhnB protein D LV28_18785 hypothetical protein K11477 glcG; glc operon protein GlcG D LV28_01835 hypothetical protein K11811 arsH; arsenical resistance protein ArsH D LV28_20350 hypothetical protein K03744 lemA; LemA protein D LV28_06995 SlyX protein K03745 slyX; SlyX protein D LV28_11955 hypothetical protein K05805 creA; CreA protein D LV28_23980 hypothetical protein K03749 dedD; DedD protein D LV28_09145 hypothetical protein K03975 dedA; membrane-associated protein D LV28_22320 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D LV28_22325 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D LV28_15675 hypothetical protein K08972 K08972; putative membrane protein D LV28_02930 hypothetical protein K08995 K08995; putative membrane protein D LV28_16365 hypothetical protein K09858 K09858; SEC-C motif domain protein D LV28_21800 cupin K11312 K11312; cupin 2 domain-containing protein D LV28_04710 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D LV28_19680 hypothetical protein K06867 K06867; uncharacterized protein D LV28_03330 hypothetical protein K06867 K06867; uncharacterized protein D LV28_20345 hypothetical protein K06872 K06872; uncharacterized protein D LV28_12300 hypothetical protein K06903 W; Bacteriophage baseplate protein W D LV28_12370 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein D LV28_12365 phage tail protein K06906 gpU; phage tail protein D LV28_12345 phage tail protein K06907 FI; Bacteriophage tail sheath protein D LV28_24760 phage tail protein K06907 FI; Bacteriophage tail sheath protein D LV28_12350 phage tail protein K06908 FII; Bacteriophage tail tube protein D LV28_11400 AAA family ATPase K06923 K06923; uncharacterized protein D LV28_13665 CoA-binding protein K06929 K06929; uncharacterized protein D LV28_08305 DNA-binding protein K06934 K06934; uncharacterized protein D LV28_01255 hypothetical protein K06938 K06938; uncharacterized protein D LV28_10475 hypothetical protein K06940 K06940; uncharacterized protein D LV28_17405 hypothetical protein K06950 K06950; uncharacterized protein D LV28_11265 hypothetical protein K06950 K06950; uncharacterized protein D LV28_02050 NADH-ubiquinone oxidoreductase subunit 6 K06954 K06954; uncharacterized protein D LV28_05210 glyoxalase K06991 K06991; uncharacterized protein D LV28_24220 peptidase C39 K06992 K06992; uncharacterized protein D LV28_04185 hypothetical protein K06995 K06995; uncharacterized protein D LV28_04800 cupin K06995 K06995; uncharacterized protein D LV28_22550 bleomycin resistance protein K06996 K06996; uncharacterized protein D LV28_11175 esterase K07000 K07000; uncharacterized protein D LV28_21750 RND transporter K07003 K07003; uncharacterized protein D LV28_02275 flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D LV28_16065 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D LV28_10375 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D LV28_16605 alpha/beta hydrolase K07018 K07018; uncharacterized protein D LV28_07715 alpha/beta hydrolase K07019 K07019; uncharacterized protein D LV28_09725 lactoylglutathione lyase K07032 K07032; uncharacterized protein D LV28_06350 metal-dependent hydrolase K07044 K07044; uncharacterized protein D LV28_19960 4-hydroxyphenyl-beta-ketoacyl-CoA hydrolase K07045 K07045; uncharacterized protein D LV28_11715 metalloprotease K07054 K07054; uncharacterized protein D LV28_03195 hypothetical protein K07090 K07090; uncharacterized protein D LV28_20700 hypothetical protein K07090 K07090; uncharacterized protein D LV28_22670 permease K07090 K07090; uncharacterized protein D LV28_04140 hypothetical protein K07090 K07090; uncharacterized protein D LV28_20155 permease K07090 K07090; uncharacterized protein D LV28_14210 hypothetical protein K07090 K07090; uncharacterized protein D LV28_11860 serine/threonine protein phosphatase K07098 K07098; uncharacterized protein D LV28_24380 nicotinate phosphoribosyltransferase K07101 K07101; uncharacterized protein D LV28_08685 hypothetical protein K07112 K07112; uncharacterized protein D LV28_08690 YeeE/YedE K07112 K07112; uncharacterized protein D LV28_22605 transporter K07112 K07112; uncharacterized protein D LV28_05655 hypothetical protein K07112 K07112; uncharacterized protein D LV28_14365 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein D LV28_18450 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein D LV28_16130 3-beta hydroxysteroid dehydrogenase K07118 K07118; uncharacterized protein D LV28_15125 hypothetical protein K07126 K07126; uncharacterized protein D LV28_01130 peptidase S16 K07157 K07157; uncharacterized protein D LV28_15120 hypothetical protein K09004 K09004; uncharacterized protein D LV28_02350 hypothetical protein K09005 K09005; uncharacterized protein D LV28_09000 hypothetical protein K09005 K09005; uncharacterized protein D LV28_05565 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D LV28_16620 hypothetical protein K09158 K09158; uncharacterized protein D LV28_07570 hypothetical protein K09386 K09386; uncharacterized protein D LV28_02055 cyclopropane fatty acid synthase K09701 K09701; uncharacterized protein D LV28_22570 hypothetical protein K09705 K09705; uncharacterized protein D LV28_08230 hypothetical protein K09768 K09768; uncharacterized protein D LV28_07125 hypothetical protein K09780 K09780; uncharacterized protein D LV28_10825 hypothetical protein K09786 K09786; uncharacterized protein D LV28_09035 hypothetical protein K09791 K09791; uncharacterized protein D LV28_01085 RnfH family protein K09801 K09801; uncharacterized protein D LV28_05450 hypothetical protein K09822 K09822; uncharacterized protein D LV28_23830 hypothetical protein K09861 K09861; uncharacterized protein D LV28_11390 pilus assembly protein K09862 K09862; uncharacterized protein D LV28_21235 hypothetical protein K09919 K09919; uncharacterized protein D LV28_15420 hypothetical protein K09921 K09921; uncharacterized protein D LV28_20850 hypothetical protein K09924 K09924; uncharacterized protein D LV28_25090 hypothetical protein K09928 K09928; uncharacterized protein D LV28_06640 peptidase K09941 K09941; uncharacterized protein D LV28_23755 hypothetical protein K09946 K09946; uncharacterized protein D LV28_07260 hypothetical protein K09954 K09954; uncharacterized protein D LV28_02005 hypothetical protein K09958 K09958; uncharacterized protein D LV28_01640 hypothetical protein K09965 K09965; uncharacterized protein D LV28_15720 polysaccharide biosynthesis protein GumN K09973 K09973; uncharacterized protein D LV28_24950 hypothetical protein K09975 K09975; uncharacterized protein D LV28_00865 hypothetical protein K09977 K09977; uncharacterized protein D LV28_10705 hypothetical protein K09981 K09981; uncharacterized protein D LV28_07080 hypothetical protein K09983 K09983; uncharacterized protein D LV28_14590 hypothetical protein K09983 K09983; uncharacterized protein D LV28_23275 hypothetical protein K09989 K09989; uncharacterized protein D LV28_16140 proline hydroxylase K09990 K09990; uncharacterized protein D LV28_00670 phosphate transport regulator K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 28, 2024