+D
#
Spliceosome - Phaseolus vulgaris (common bean)
%
!
ACommon components
B Common spliceosomal components
C Cap binding complex
D PHAVU_001G086100g hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1
D PHAVU_005G100900g hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2
C hnRNP proteins
D PHAVU_008G033500g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_011G159400g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_008G206200g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_004G006700g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_003G184700g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_001G100900g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_001G141300g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_008G153800g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_004G052900g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_005G158100g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_006G005300g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D PHAVU_003G058600g hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
C SR proteins
D PHAVU_007G197400g hypothetical protein K12890 SRSF1; serine/arginine-rich splicing factor 1
D PHAVU_001G207100g hypothetical protein K12890 SRSF1; serine/arginine-rich splicing factor 1
D PHAVU_009G046000g hypothetical protein K12890 SRSF1; serine/arginine-rich splicing factor 1
D PHAVU_002G208600g hypothetical protein K12891 SRSF2_8; serine/arginine-rich splicing factor 2/8
D PHAVU_010G092200g hypothetical protein K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D PHAVU_010G116100g hypothetical protein K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D PHAVU_003G223800g hypothetical protein K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D PHAVU_001G060500g hypothetical protein K12896 SRSF7; serine/arginine-rich splicing factor 7
D PHAVU_001G172600g hypothetical protein K12896 SRSF7; serine/arginine-rich splicing factor 7
D PHAVU_001G172700g hypothetical protein K12896 SRSF7; serine/arginine-rich splicing factor 7
D PHAVU_007G262600g hypothetical protein K12900 SRSF10; serine/arginine-rich splicing factor 10
D PHAVU_003G099500g hypothetical protein K12900 SRSF10; serine/arginine-rich splicing factor 10
D PHAVU_007G145300g hypothetical protein K12900 SRSF10; serine/arginine-rich splicing factor 10
D PHAVU_001G268900g hypothetical protein K12900 SRSF10; serine/arginine-rich splicing factor 10
D PHAVU_008G232900g hypothetical protein K12900 SRSF10; serine/arginine-rich splicing factor 10
D PHAVU_002G104100g hypothetical protein K12897 TRA2; transformer-2 protein
C General mRNP proteins
D PHAVU_009G146500g hypothetical protein K13091 RBM23_39; RNA-binding protein 23/39
D PHAVU_002G268000g hypothetical protein K13091 RBM23_39; RNA-binding protein 23/39
D PHAVU_007G018500g hypothetical protein K13091 RBM23_39; RNA-binding protein 23/39
#
AComplex A
B U1 snRNP components
C Sm proteins
D PHAVU_008G264900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_008G234900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_001G149700g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_008G016100g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_011G008300g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G324000g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G266900g hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PHAVU_009G153200g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G149400g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G145500g hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D PHAVU_001G191400g hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D PHAVU_002G029300g hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D PHAVU_006G108000g hypothetical protein K11091 SNRPA; U1 small nuclear ribonucleoprotein A
D PHAVU_007G166600g hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D PHAVU_010G139400g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_006G079800g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_006G121700g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_004G011600g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_003G204200g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_001G029800g hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
D PHAVU_007G047100g hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
D PHAVU_002G071900g hypothetical protein K12822 RBM25; RNA-binding protein 25
D PHAVU_011G031500g hypothetical protein K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D PHAVU_008G264900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_008G234900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_001G149700g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_008G016100g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_011G008300g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G324000g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G266900g hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PHAVU_009G153200g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G149400g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G145500g hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D PHAVU_001G191400g hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D PHAVU_009G235000g hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_003G001500g hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_009G0039000 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_008G251100g hypothetical protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PHAVU_007G037600g hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D PHAVU_005G180000g hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D PHAVU_009G053700g hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D PHAVU_006G175600g hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D PHAVU_006G188200g hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D PHAVU_007G009600g hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D PHAVU_001G200200g hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D PHAVU_011G214800g hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D PHAVU_007G091200g hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D PHAVU_009G163800g hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PHAVU_003G055200g hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PHAVU_008G202000g hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D PHAVU_001G214100g hypothetical protein K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D PHAVU_001G038900g hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
D PHAVU_006G069000g hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
C U2 related factors
D PHAVU_003G009100g hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PHAVU_001G186200g hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PHAVU_005G127700g hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PHAVU_005G127800g hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PHAVU_005G001300g hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D PHAVU_007G275200g hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D PHAVU_001G214700g hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D PHAVU_002G037900g hypothetical protein K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D PHAVU_002G100900g hypothetical protein K12840 RBM17; splicing factor 45
D PHAVU_003G075900g hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D PHAVU_003G2751000 hypothetical protein K12842 SR140; U2-associated protein SR140
D PHAVU_006G221300g hypothetical protein K24273 ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
B Other components
C Complex A specific factors
D PHAVU_004G113600g hypothetical protein K02180 BUB3; cell cycle arrest protein BUB3
D PHAVU_007G044000g hypothetical protein K02180 BUB3; cell cycle arrest protein BUB3
D PHAVU_007G044700g hypothetical protein K02180 BUB3; cell cycle arrest protein BUB3
D PHAVU_002G175700g hypothetical protein K08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]
D PHAVU_003G209300g hypothetical protein K08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]
D PHAVU_007G117900g hypothetical protein K13093 HTATSF1; HIV Tat-specific factor 1
D PHAVU_003G273500g hypothetical protein K13094 RBM5_10; RNA-binding protein 5/10
D PHAVU_011G006700g hypothetical protein K13095 SF1; splicing factor 1
D PHAVU_001G268200g hypothetical protein K13095 SF1; splicing factor 1
D PHAVU_011G212200g hypothetical protein K13096 SF4; splicing factor 4
D PHAVU_005G036800g hypothetical protein K13096 SF4; splicing factor 4
D PHAVU_006G072900g hypothetical protein K13098 TLS; RNA-binding protein FUS
D PHAVU_008G257600g hypothetical protein K13098 TLS; RNA-binding protein FUS
#
AComplex B
B U1 snRNP components
C Sm proteins
D PHAVU_008G264900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_008G234900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_001G149700g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_008G016100g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_011G008300g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G324000g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G266900g hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PHAVU_009G153200g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G149400g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G145500g hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D PHAVU_001G191400g hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D PHAVU_002G029300g hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D PHAVU_006G108000g hypothetical protein K11091 SNRPA; U1 small nuclear ribonucleoprotein A
D PHAVU_007G166600g hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D PHAVU_010G139400g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_006G079800g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_006G121700g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_004G011600g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_003G204200g hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D PHAVU_001G029800g hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
D PHAVU_007G047100g hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
D PHAVU_002G071900g hypothetical protein K12822 RBM25; RNA-binding protein 25
D PHAVU_011G031500g hypothetical protein K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D PHAVU_008G264900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_008G234900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_001G149700g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_008G016100g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_011G008300g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G324000g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G266900g hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PHAVU_009G153200g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G149400g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G145500g hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D PHAVU_001G191400g hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D PHAVU_009G235000g hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_003G001500g hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_009G0039000 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_008G251100g hypothetical protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PHAVU_007G037600g hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D PHAVU_005G180000g hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D PHAVU_009G053700g hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D PHAVU_006G175600g hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D PHAVU_006G188200g hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D PHAVU_007G009600g hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D PHAVU_001G200200g hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D PHAVU_011G214800g hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D PHAVU_007G091200g hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D PHAVU_009G163800g hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PHAVU_003G055200g hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PHAVU_008G202000g hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D PHAVU_001G214100g hypothetical protein K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D PHAVU_001G038900g hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
D PHAVU_006G069000g hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
C U2 related factors
D PHAVU_003G009100g hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PHAVU_001G186200g hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PHAVU_005G127700g hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PHAVU_005G127800g hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D PHAVU_005G001300g hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D PHAVU_007G275200g hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D PHAVU_001G214700g hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D PHAVU_002G037900g hypothetical protein K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D PHAVU_002G100900g hypothetical protein K12840 RBM17; splicing factor 45
D PHAVU_003G075900g hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D PHAVU_003G2751000 hypothetical protein K12842 SR140; U2-associated protein SR140
D PHAVU_006G221300g hypothetical protein K24273 ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
B U4/U6.U5 tri-snRNP components
C Sm proteins
D PHAVU_008G264900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_008G234900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_001G149700g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_008G016100g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_011G008300g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G324000g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G266900g hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PHAVU_009G153200g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G149400g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G145500g hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D PHAVU_001G191400g hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D PHAVU_001G148500g hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
D PHAVU_004G095700g hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
D PHAVU_004G129000g hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
D PHAVU_007G144000g hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
D PHAVU_001G206200g hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
D PHAVU_001G007400g hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
D PHAVU_002G196500g hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
D PHAVU_008G068400g hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
D PHAVU_002G171900g hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
D PHAVU_001G036000g hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
C U4/U6 snRNP specific factors
D PHAVU_007G008300g hypothetical protein K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3
D PHAVU_002G037600g hypothetical protein K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3
D PHAVU_007G249600g hypothetical protein K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4
D PHAVU_011G203200g hypothetical protein K09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
D PHAVU_008G149300g hypothetical protein K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31
D PHAVU_003G041300g hypothetical protein K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31
D PHAVU_008G269000g hypothetical protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D PHAVU_006G221600g hypothetical protein K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3
C U5 snRNP specific factors
D PHAVU_003G174100g hypothetical protein K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D PHAVU_005G104900g hypothetical protein K12855 PRPF6; pre-mRNA-processing factor 6
D PHAVU_005G178600g hypothetical protein K12856 PRPF8; pre-mRNA-processing factor 8
D PHAVU_001G114300g hypothetical protein K12857 SNRNP40; Prp8 binding protein
D PHAVU_005G055300g hypothetical protein K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D PHAVU_003G281500g hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
D PHAVU_003G088100g hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
D PHAVU_006G122000g hypothetical protein K12859 TXNL4A; U5 snRNP protein, DIM1 family
D PHAVU_003G004100g hypothetical protein K12859 TXNL4A; U5 snRNP protein, DIM1 family
D PHAVU_006G206700g hypothetical protein K13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2
C U4/U6.U5 tri-snRNP specific factors
D PHAVU_011G184800g hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
D PHAVU_008G270100g hypothetical protein K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2
D PHAVU_007G152400g hypothetical protein K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2
D PHAVU_003G144300g hypothetical protein K12846 SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3
C U4/U6.U5 tri-snRNP related factors
D PHAVU_001G225500g hypothetical protein K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D PHAVU_007G199400g hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D PHAVU_008G239200g hypothetical protein K12850 PRPF38B; pre-mRNA-splicing factor 38B
D PHAVU_006G029300g hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D PHAVU_006G191000g hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D PHAVU_003G039000g hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D PHAVU_009G193400g hypothetical protein K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D PHAVU_003G026500g hypothetical protein K13101 GPKOW; G patch domain and KOW motifs-containing protein
D PHAVU_003G004000g hypothetical protein K13101 GPKOW; G patch domain and KOW motifs-containing protein
D PHAVU_002G010800g hypothetical protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D PHAVU_008G002600g hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D PHAVU_002G303000g hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D PHAVU_004G098200g hypothetical protein K13104 ZNF830; zinc finger protein 830
B Other components
C Prp19 complex
D PHAVU_007G270500g hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D PHAVU_004G090900g hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D PHAVU_007G122400g hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D PHAVU_002G327300g hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D PHAVU_009G249100g hypothetical protein K12862 PLRG1; pleiotropic regulator 1
D PHAVU_003G220300g hypothetical protein K12863 CWC15; protein CWC15
D PHAVU_008G217400g hypothetical protein K12863 CWC15; protein CWC15
D PHAVU_006G085100g hypothetical protein K12864 CTNNBL1; beta-catenin-like protein 1
D PHAVU_006G219600g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G011300g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G011400g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G011600g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G011900g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G012600g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G013000g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_011G065000g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_009G076700g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_003G154800g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_007G157200g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_006G170200g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_006G170300g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_001G169000g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_006G219500g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_007G243700g hypothetical protein K12865 PQBP1; polyglutamine-binding protein 1
C Prp19-related factors
D PHAVU_004G176500g hypothetical protein K06063 SNW1; SNW domain-containing protein 1
D PHAVU_006G191100g hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D PHAVU_006G191500g hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D PHAVU_007G019200g hypothetical protein K12868 SYF2; pre-mRNA-splicing factor SYF2
D PHAVU_002G162900g hypothetical protein K12869 CRN; crooked neck
D PHAVU_003G001700g hypothetical protein K12874 AQR; intron-binding protein aquarius
D PHAVU_011G135400g hypothetical protein K12873 BUD31; bud site selection protein 31
D PHAVU_001G030700g hypothetical protein K12873 BUD31; bud site selection protein 31
D PHAVU_001G080600g hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D PHAVU_006G049400g hypothetical protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D PHAVU_008G2330001 hypothetical protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D PHAVU_001G192400g hypothetical protein K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D PHAVU_003G140900g hypothetical protein K13105 PRCC; proline-rich protein PRCC
D PHAVU_006G010100g hypothetical protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
D PHAVU_008G282900g hypothetical protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
D PHAVU_008G033600g hypothetical protein K25780 KHDC4; kelch domain-containing protein 4
C RES complex
D PHAVU_011G0764001 hypothetical protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D PHAVU_010G098800g hypothetical protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D PHAVU_008G261900g hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D PHAVU_006G037500g hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C Complex B specific factors
D PHAVU_009G223400g hypothetical protein K13109 IK; IK cytokine
D PHAVU_003G051500g hypothetical protein K13110 MFAP1; microfibrillar-associated protein 1
D PHAVU_002G251300g hypothetical protein K13111 SMU1; WD40 repeat-containing protein SMU1
D PHAVU_006G167900g hypothetical protein K13113 UBL5; ubiquitin-like protein 5
#
AComplex C
B U2 snRNP components
C Sm proteins
D PHAVU_008G264900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_008G234900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_001G149700g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_008G016100g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_011G008300g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G324000g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G266900g hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PHAVU_009G153200g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G149400g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G145500g hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D PHAVU_001G191400g hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D PHAVU_001G148500g hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
D PHAVU_004G095700g hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
D PHAVU_004G129000g hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
C U2 SnRNP specific factors
D PHAVU_009G235000g hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_003G001500g hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_009G0039000 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D PHAVU_008G251100g hypothetical protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D PHAVU_007G037600g hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D PHAVU_005G180000g hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D PHAVU_009G053700g hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D PHAVU_006G175600g hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D PHAVU_006G188200g hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D PHAVU_007G009600g hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D PHAVU_001G200200g hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D PHAVU_011G214800g hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D PHAVU_007G091200g hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D PHAVU_009G163800g hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PHAVU_003G055200g hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D PHAVU_008G202000g hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D PHAVU_001G214100g hypothetical protein K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D PHAVU_001G038900g hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
D PHAVU_006G069000g hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
B U4/U6.U5 tri-snRNP components
C Sm proteins
D PHAVU_008G264900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_008G234900g hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D PHAVU_001G149700g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_008G016100g hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D PHAVU_011G008300g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G324000g hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D PHAVU_002G266900g hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D PHAVU_009G153200g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G149400g hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D PHAVU_003G145500g hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D PHAVU_001G191400g hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U5 SnRNP specific factors
D PHAVU_003G174100g hypothetical protein K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D PHAVU_005G055300g hypothetical protein K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D PHAVU_005G104900g hypothetical protein K12855 PRPF6; pre-mRNA-processing factor 6
D PHAVU_005G178600g hypothetical protein K12856 PRPF8; pre-mRNA-processing factor 8
D PHAVU_001G114300g hypothetical protein K12857 SNRNP40; Prp8 binding protein
D PHAVU_003G281500g hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
D PHAVU_003G088100g hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
C U4/U6.U5 tri-SnRNP specific factors
D PHAVU_011G184800g hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
C U4/U6.U5 tri-SnRNP related factors
D PHAVU_001G225500g hypothetical protein K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D PHAVU_007G199400g hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D PHAVU_008G239200g hypothetical protein K12850 PRPF38B; pre-mRNA-splicing factor 38B
D PHAVU_006G029300g hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D PHAVU_006G191000g hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D PHAVU_003G039000g hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D PHAVU_009G193400g hypothetical protein K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D PHAVU_003G026500g hypothetical protein K13101 GPKOW; G patch domain and KOW motifs-containing protein
D PHAVU_003G004000g hypothetical protein K13101 GPKOW; G patch domain and KOW motifs-containing protein
D PHAVU_002G010800g hypothetical protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D PHAVU_008G002600g hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D PHAVU_002G303000g hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D PHAVU_004G098200g hypothetical protein K13104 ZNF830; zinc finger protein 830
D PHAVU_001G214700g hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D PHAVU_004G082100g hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
B Other components
C Prp19-CDC5 complex
D PHAVU_007G270500g hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D PHAVU_004G090900g hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D PHAVU_007G122400g hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D PHAVU_002G327300g hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D PHAVU_006G085100g hypothetical protein K12864 CTNNBL1; beta-catenin-like protein 1
D PHAVU_003G220300g hypothetical protein K12863 CWC15; protein CWC15
D PHAVU_008G217400g hypothetical protein K12863 CWC15; protein CWC15
D PHAVU_009G249100g hypothetical protein K12862 PLRG1; pleiotropic regulator 1
D PHAVU_006G219600g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G011300g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G011400g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G011600g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G011900g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G012600g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_008G013000g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_011G065000g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_009G076700g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_003G154800g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_007G157200g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_006G170200g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_006G170300g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_001G169000g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D PHAVU_006G219500g hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D PHAVU_004G176500g hypothetical protein K06063 SNW1; SNW domain-containing protein 1
D PHAVU_006G191100g hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D PHAVU_006G191500g hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D PHAVU_007G019200g hypothetical protein K12868 SYF2; pre-mRNA-splicing factor SYF2
D PHAVU_002G162900g hypothetical protein K12869 CRN; crooked neck
D PHAVU_003G001700g hypothetical protein K12874 AQR; intron-binding protein aquarius
D PHAVU_011G135400g hypothetical protein K12873 BUD31; bud site selection protein 31
D PHAVU_001G030700g hypothetical protein K12873 BUD31; bud site selection protein 31
D PHAVU_001G080600g hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D PHAVU_006G049400g hypothetical protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D PHAVU_008G2330001 hypothetical protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D PHAVU_001G192400g hypothetical protein K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D PHAVU_006G010100g hypothetical protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
D PHAVU_008G282900g hypothetical protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
C RES complex
D PHAVU_011G0764001 hypothetical protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D PHAVU_010G098800g hypothetical protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D PHAVU_008G261900g hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D PHAVU_006G037500g hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C EJC/TREX
D PHAVU_001G250000g hypothetical protein K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
D PHAVU_009G093800g hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D PHAVU_001G051700g hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D PHAVU_010G154700g hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D PHAVU_009G241200g hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D PHAVU_010G046900g hypothetical protein K12877 MAGOH; protein mago nashi
D PHAVU_006G161800g hypothetical protein K12877 MAGOH; protein mago nashi
D PHAVU_006G211700g hypothetical protein K13114 PNN; pinin
D PHAVU_002G034400g hypothetical protein K12876 RBM8A; RNA-binding protein 8A
D PHAVU_005G004500g hypothetical protein K12878 THOC1; THO complex subunit 1
D PHAVU_002G324500g hypothetical protein K12879 THOC2; THO complex subunit 2
D PHAVU_006G061900g hypothetical protein K12880 THOC3; THO complex subunit 3
D PHAVU_008G013600g hypothetical protein K12881 THOC4; THO complex subunit 4
D PHAVU_011G066000g hypothetical protein K12881 THOC4; THO complex subunit 4
D PHAVU_001G230200g hypothetical protein K12881 THOC4; THO complex subunit 4
D PHAVU_005G142200g hypothetical protein K12881 THOC4; THO complex subunit 4
C Step II factors
D PHAVU_007G134200g hypothetical protein K12816 CDC40; pre-mRNA-processing factor 17
D PHAVU_005G035400g hypothetical protein K12817 PRPF18; pre-mRNA-splicing factor 18
D PHAVU_006G069800g hypothetical protein K12819 SLU7; pre-mRNA-processing factor SLU7
D PHAVU_002G175400g hypothetical protein K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D PHAVU_001G008600g hypothetical protein K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D PHAVU_001G254100g hypothetical protein K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D PHAVU_001G264100g hypothetical protein K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D PHAVU_003G041900g hypothetical protein K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D PHAVU_005G150000g hypothetical protein K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
D PHAVU_004G165300g hypothetical protein K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
C PPlases
D PHAVU_010G085700g hypothetical protein K12734 PPIL3; peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8]
D PHAVU_011G177200g hypothetical protein K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]
D PHAVU_008G145400g hypothetical protein K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]
D PHAVU_001G052800g hypothetical protein K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]
D PHAVU_001G052900g hypothetical protein K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]
D PHAVU_001G053000g hypothetical protein K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]
D PHAVU_001G155500g hypothetical protein K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]
D PHAVU_010G112300g hypothetical protein K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]
D PHAVU_005G126100g hypothetical protein K12736 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
D PHAVU_001G045200g hypothetical protein K12737 SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]
C hnRNP proteins
D PHAVU_003G269800g hypothetical protein K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H
D PHAVU_006G062500g hypothetical protein K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H
D PHAVU_009G257300g hypothetical protein K13161 HNRNPR; heterogeneous nuclear ribonucleoprotein R
D PHAVU_001G190900g hypothetical protein K13161 HNRNPR; heterogeneous nuclear ribonucleoprotein R
D PHAVU_011G094700g hypothetical protein K13161 HNRNPR; heterogeneous nuclear ribonucleoprotein R
C Complex C specific factors
D PHAVU_003G026300g hypothetical protein K13115 CCDC130; coiled-coil domain-containing protein 130
D PHAVU_001G005600g hypothetical protein K13115 CCDC130; coiled-coil domain-containing protein 130
D PHAVU_006G090900g hypothetical protein K13116 DDX41; ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
D PHAVU_006G179000g hypothetical protein K13117 DHX35; ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
D PHAVU_008G286200g hypothetical protein K13118 DGCR14; protein DGCR14
D PHAVU_002G320300g hypothetical protein K13119 FAM50; protein FAM50
D PHAVU_010G163800g hypothetical protein K13120 FAM32A; protein FAM32A
D PHAVU_011G211400g hypothetical protein K13121 FRA10AC1; protein FRA10AC1
D PHAVU_003G179400g hypothetical protein K13123 GPATCH1; G patch domain-containing protein 1
D PHAVU_002G268300g hypothetical protein K13124 MORG1; mitogen-activated protein kinase organizer 1
D PHAVU_006G193700g hypothetical protein K13125 NOSIP; nitric oxide synthase-interacting protein
D PHAVU_005G039000g hypothetical protein K13126 PABPC; polyadenylate-binding protein
D PHAVU_001G183900g hypothetical protein K13126 PABPC; polyadenylate-binding protein
D PHAVU_007G084800g hypothetical protein K13126 PABPC; polyadenylate-binding protein
D PHAVU_001G023500g hypothetical protein K13126 PABPC; polyadenylate-binding protein
D PHAVU_007G225700g hypothetical protein K13126 PABPC; polyadenylate-binding protein
D PHAVU_008G098700g hypothetical protein K13126 PABPC; polyadenylate-binding protein
D PHAVU_003G0475001 hypothetical protein K13126 PABPC; polyadenylate-binding protein
D PHAVU_010G084000g hypothetical protein K13127 RNF113A; RING finger protein 113A
D PHAVU_004G082100g hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
D PHAVU_006G009500g hypothetical protein K13128 ZCCHC8; zinc finger CCHC domain-containing protein 8
D PHAVU_001G184000g hypothetical protein K25058 CACTIN; cactin
D PHAVU_006G112400g hypothetical protein K25059 SDE2; replication stress response regulator SDE2
D PHAVU_007G040000g hypothetical protein K26159 PRKRIP1; PRKR-interacting protein 1
#
AOther splicing related proteins
B Proteins involved in snRNP biogenesis
C SMN complex factors
D PHAVU_007G004100g hypothetical protein K13130 GEMIN2; gem associated protein 2
D PHAVU_003G160500g hypothetical protein K13137 STRAP; serine-threonine kinase receptor-associated protein
C Integrator complex
D PHAVU_007G141800g hypothetical protein K13140 INTS3; integrator complex subunit 3
D PHAVU_008G092100g hypothetical protein K13141 INTS4; integrator complex subunit 4
D PHAVU_004G026300g hypothetical protein K13144 INTS7; integrator complex subunit 7
D PHAVU_005G124500g hypothetical protein K13144 INTS7; integrator complex subunit 7
D PHAVU_002G285400g hypothetical protein K13146 INTS9; integrator complex subunit 9
D PHAVU_003G018200g hypothetical protein K13148 CPSF3L; integrator complex subunit 11 [EC:3.1.27.-]
C Other proteins involved in snRNP biogenesis
D PHAVU_001G255700g hypothetical protein K13150 COIL; coilin
D PHAVU_003G075900g hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D PHAVU_009G166600g hypothetical protein K13151 SNUPN; snurportin-1
D PHAVU_008G143300g hypothetical protein K23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
D PHAVU_005G030000g hypothetical protein K23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
D PHAVU_011G004300g hypothetical protein K05019 CLNS1A; chloride channel, nucleotide-sensitive, 1A
D PHAVU_001G022600g hypothetical protein K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]
B Minor spliceosome components
C Minor spliceosome specific factors
D PHAVU_007G203900g hypothetical protein K13152 ZMAT5; U11/U12 small nuclear ribonucleoprotein 20 kDa protein
D PHAVU_002G058300g hypothetical protein K13153 SNRNP25; U11/U12 small nuclear ribonucleoprotein 25 kDa protein
D PHAVU_005G012700g hypothetical protein K13154 ZCRB1; U11/U12 small nuclear ribonucleoprotein 31 kDa protein
D PHAVU_008G006500g hypothetical protein K13155 SNRNP35; U11/U12 small nuclear ribonucleoprotein 35 kDa protein
D PHAVU_003G097100g hypothetical protein K13156 SNRNP48; U11/U12 small nuclear ribonucleoprotein 48 kDa protein
D PHAVU_001G100700g hypothetical protein K13157 RNPC3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein
C Minor spliceosome associated proteins
D PHAVU_011G052800g hypothetical protein K24824 RBM48; RNA-binding protein 48
D PHAVU_008G233200g hypothetical protein K24825 ARMC7; armadillo repeat-containing protein 7
D PHAVU_007G052700g hypothetical protein K24826 CRIPT; cysteine-rich PDZ-binding protein
D PHAVU_002G010800g hypothetical protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D PHAVU_009G166300g hypothetical protein K26160 CENATAC; centrosomal AT-AC splicing factor
B Spliceosome associated proteins (SAPs)
C hnRNP proteins
C SR proteins
D PHAVU_002G018900g hypothetical protein K13168 CLASRP; CLK4-associating serine/arginine rich protein
D PHAVU_001G028000g hypothetical protein K13169 AKAP17; A-kinase anchor protein 17
C SR-related proteins
D PHAVU_011G061700g hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1
D PHAVU_001G088700g hypothetical protein K13172 SRRM2; serine/arginine repetitive matrix protein 2
D PHAVU_006G038500g hypothetical protein K13172 SRRM2; serine/arginine repetitive matrix protein 2
D PHAVU_009G151400g hypothetical protein K13173 ARGLU1; arginine and glutamate-rich protein 1
D PHAVU_006G214600g hypothetical protein K13173 ARGLU1; arginine and glutamate-rich protein 1
C TREX complex
D PHAVU_005G004500g hypothetical protein K12878 THOC1; THO complex subunit 1
D PHAVU_002G324500g hypothetical protein K12879 THOC2; THO complex subunit 2
D PHAVU_006G061900g hypothetical protein K12880 THOC3; THO complex subunit 3
D PHAVU_008G013600g hypothetical protein K12881 THOC4; THO complex subunit 4
D PHAVU_011G066000g hypothetical protein K12881 THOC4; THO complex subunit 4
D PHAVU_001G230200g hypothetical protein K12881 THOC4; THO complex subunit 4
D PHAVU_005G142200g hypothetical protein K12881 THOC4; THO complex subunit 4
D PHAVU_009G065600g hypothetical protein K13174 THOC5; THO complex subunit 5
D PHAVU_001G022500g hypothetical protein K13174 THOC5; THO complex subunit 5
D PHAVU_003G1347001 hypothetical protein K13175 THOC6; THO complex subunit 6
D PHAVU_006G178100g hypothetical protein K13176 THOC7; THO complex subunit 7
D PHAVU_009G093800g hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D PHAVU_001G051700g hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D PHAVU_010G154700g hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
C RNA helicase-like proteins
D PHAVU_007G262000g hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D PHAVU_002G234900g hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D PHAVU_003G163700g hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D PHAVU_001G268400g hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D PHAVU_003G179000g hypothetical protein K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D PHAVU_009G118200g hypothetical protein K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D PHAVU_009G201200g hypothetical protein K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D PHAVU_006G039100g hypothetical protein K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D PHAVU_002G077700g hypothetical protein K26077 ISE2; ATP-dependent RNA helicase ISE2 [EC:5.6.2.6]
C RNA binding proteins (RBPs)
D PHAVU_004G109700g hypothetical protein K24527 RBM18; RNA-binding protein 18
D PHAVU_008G174100g hypothetical protein K25006 RBM24_38; RNA-binding protein 24/38
D PHAVU_004G007600g hypothetical protein K13192 RBM26; RNA-binding protein 26
D PHAVU_011G066300g hypothetical protein K13195 CIRBP; cold-inducible RNA-binding protein
D PHAVU_007G141100g hypothetical protein K14944 NOVA; RNA-binding protein Nova
D PHAVU_010G059400g hypothetical protein K14945 QKI; protein quaking
D PHAVU_006G080900g hypothetical protein K14945 QKI; protein quaking
D PHAVU_008G079200g hypothetical protein K14945 QKI; protein quaking
D PHAVU_006G219900g hypothetical protein K14945 QKI; protein quaking
D PHAVU_005G003500g hypothetical protein K14945 QKI; protein quaking
D PHAVU_008G244000g hypothetical protein K14945 QKI; protein quaking
D PHAVU_010G049300g hypothetical protein K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D PHAVU_008G047300g hypothetical protein K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D PHAVU_007G003500g hypothetical protein K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D PHAVU_010G127300g hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
D PHAVU_009G102400g hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
D PHAVU_003G129100g hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
D PHAVU_002G152600g hypothetical protein K20100 YTHDC1; YTH domain-containing protein 1
D PHAVU_007G172800g hypothetical protein K25931 NKAP; NF-kappa-B-activating protein
C Other SAPs
D PHAVU_008G233500g hypothetical protein K13205 AAR2; A1 cistron-splicing factor AAR2
D PHAVU_007G013400g hypothetical protein K13206 CCDC55; coiled-coil domain-containing protein 55
D PHAVU_001G201600g hypothetical protein K13207 CUGBP; CUG-BP- and ETR3-like factor
D PHAVU_001G214500g hypothetical protein K13207 CUGBP; CUG-BP- and ETR3-like factor
D PHAVU_007G166900g hypothetical protein K13207 CUGBP; CUG-BP- and ETR3-like factor
D PHAVU_005G118800g hypothetical protein K09528 DNAJC8; DnaJ homolog subfamily C member 8
D PHAVU_003G176300g hypothetical protein K09533 DNAJC13; DnaJ homolog subfamily C member 13
D PHAVU_009G076600g hypothetical protein K13210 FUBP; far upstream element-binding protein
D PHAVU_009G076800g hypothetical protein K13210 FUBP; far upstream element-binding protein
D PHAVU_002G036300g hypothetical protein K13210 FUBP; far upstream element-binding protein
D PHAVU_001G030200g hypothetical protein K13211 GCFC; GC-rich sequence DNA-binding factor
D PHAVU_007G273100g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_007G116900g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_006G088900g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_006G106000g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_002G293400g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_007G121400g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_007G127600g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_003G033800g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_008G229900g hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D PHAVU_006G136100g hypothetical protein K13216 PPP1R8; nuclear inhibitor of protein phosphatase 1 [EC:3.1.4.-]
D PHAVU_009G099900g hypothetical protein K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]
D PHAVU_003G0439000 hypothetical protein K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
D PHAVU_007G026100g hypothetical protein K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
D PHAVU_002G244600g hypothetical protein K13217 PRPF39; pre-mRNA-processing factor 39
D PHAVU_001G164500g hypothetical protein K13217 PRPF39; pre-mRNA-processing factor 39
D PHAVU_008G037600g hypothetical protein K14948 PTBP2; polypyrimidine tract-binding protein 2
D PHAVU_007G081900g hypothetical protein K14948 PTBP2; polypyrimidine tract-binding protein 2
D PHAVU_004G092400g hypothetical protein K14948 PTBP2; polypyrimidine tract-binding protein 2
D PHAVU_009G0542001 hypothetical protein K14948 PTBP2; polypyrimidine tract-binding protein 2
D PHAVU_004G030300g hypothetical protein K14948 PTBP2; polypyrimidine tract-binding protein 2
D PHAVU_007G001600g hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
D PHAVU_007G247000g hypothetical protein K13220 WBP4; WW domain-binding protein 4
D PHAVU_007G183500g hypothetical protein K23966 CCNL; cyclin L
D PHAVU_009G085900g hypothetical protein K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
D PHAVU_003G136700g hypothetical protein K24939 CWF19L1; CWF19-like protein 1
D PHAVU_007G037800g hypothetical protein K24940 CWF19L2; CWF19-like protein 2
#
ASplicing related RNAs
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 18, 2024