+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Rahnella aquatilis CIP 78.65 = ATCC 33071

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ACRISPR-Cas system B Universal Cas proteins C Rahaq2_1860 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 B Type I CRISPR-Cas system C Type I signiture cas proteins D Rahaq2_1861 CRISPR-associated helicase Cas3, subtype I-F/YPEST K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors D Rahaq2_1862 CRISPR type I-F/YPEST-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1 D Rahaq2_1863 CRISPR type I-F/YPEST-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2 D Rahaq2_1864 CRISPR type I-F/YPEST-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D Rahaq2_1865 CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system B Type II R-M system C Restriction endonucleases C DNA methyltransferases D Rahaq2_0290 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Rahaq2_3333 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Rahaq2_3962 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Rahaq2_3332 site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C Rahaq2_3535 restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D Rahaq2_4156 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] C ChpB-ChpS C YhaV-PrlF D Rahaq2_0105 Toxin with endonuclease activity YhaV K19155 yhaV; toxin YhaV [EC:3.1.-.-] D Rahaq2_0106 looped-hinge helix DNA binding domain, AbrB family K19156 prlF; antitoxin PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ D Rahaq2_0855 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM C HipA-HipB D Rahaq2_0590 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Rahaq2_3930 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Rahaq2_4684 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Rahaq2_4685 Helix-turn-helix protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Rahaq2_3931 putative transcriptional regulator with C-terminal CBS domains K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB C HicA-HicB C YafO-YafN C Hha-TomB D Rahaq2_3407 hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein D Rahaq2_3406 Biofilm formation regulator YbaJ K19162 tomB; hha toxicity modulator TomB C PspC-PspB D Rahaq2_2778 phage shock protein C K03973 pspC; phage shock protein C D Rahaq2_2779 phage shock protein B K03970 pspB; phage shock protein B C CcdB-CcdA D Rahaq2_2125 CcdB protein K19163 ccdB; toxin CcdB D Rahaq2_2124 post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid K19164 ccdA; antitoxin CcdA C ParE-ParD D Rahaq2_0087 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 C Doc-Phd D Rahaq2_5026 death-on-curing family protein K07341 doc; death on curing protein D Rahaq2_5027 prevent-host-death family protein K19165 phd; antitoxin Phd C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D Rahaq2_3999 uncharacterized protein, YhcH/YjgK/YiaL family K19334 tabA; biofilm protein TabA D Rahaq2_2990 hypothetical protein K12148 bssS; biofilm regulator BssS D Rahaq2_0085 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA D Rahaq2_1051 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA D Rahaq2_3083 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA D Rahaq2_3084 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA D Rahaq2_3085 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA D Rahaq2_3821 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Rahaq2_4117 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Rahaq2_0659 DNA topoisomerase IV, A subunit, proteobacterial K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Rahaq2_0656 DNA topoisomerase IV, B subunit, proteobacterial K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Rahaq2_1194 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D Rahaq2_0816 Protein of unknown function (DUF1434) K19168 cptA; toxin CptA D Rahaq2_0815 hypothetical protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C Rahaq2_1105 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C Rahaq2_5101 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023