+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Rahnella aquatilis CIP 78.65 = ATCC 33071
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ACRISPR-Cas system
B Universal Cas proteins
C Rahaq2_1860 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D Rahaq2_1861 CRISPR-associated helicase Cas3, subtype I-F/YPEST K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
C Subtype I-F factors
D Rahaq2_1862 CRISPR type I-F/YPEST-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1
D Rahaq2_1863 CRISPR type I-F/YPEST-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D Rahaq2_1864 CRISPR type I-F/YPEST-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D Rahaq2_1865 CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D Rahaq2_0290 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Rahaq2_3333 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Rahaq2_3962 DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rahaq2_3332 site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C Rahaq2_3535 restriction endonuclease K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D Rahaq2_4156 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
C ChpB-ChpS
C YhaV-PrlF
D Rahaq2_0105 Toxin with endonuclease activity YhaV K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D Rahaq2_0106 looped-hinge helix DNA binding domain, AbrB family K19156 prlF; antitoxin PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
D Rahaq2_0855 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
C YoeB-YefM
C HipA-HipB
D Rahaq2_0590 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rahaq2_3930 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rahaq2_4684 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rahaq2_4685 Helix-turn-helix protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Rahaq2_3931 putative transcriptional regulator with C-terminal CBS domains K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
D Rahaq2_3407 hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D Rahaq2_3406 Biofilm formation regulator YbaJ K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D Rahaq2_2778 phage shock protein C K03973 pspC; phage shock protein C
D Rahaq2_2779 phage shock protein B K03970 pspB; phage shock protein B
C CcdB-CcdA
D Rahaq2_2125 CcdB protein K19163 ccdB; toxin CcdB
D Rahaq2_2124 post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid K19164 ccdA; antitoxin CcdA
C ParE-ParD
D Rahaq2_0087 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
C Doc-Phd
D Rahaq2_5026 death-on-curing family protein K07341 doc; death on curing protein
D Rahaq2_5027 prevent-host-death family protein K19165 phd; antitoxin Phd
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D Rahaq2_3999 uncharacterized protein, YhcH/YjgK/YiaL family K19334 tabA; biofilm protein TabA
D Rahaq2_2990 hypothetical protein K12148 bssS; biofilm regulator BssS
D Rahaq2_0085 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA
D Rahaq2_1051 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA
D Rahaq2_3083 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA
D Rahaq2_3084 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA
D Rahaq2_3085 Protein of unknown function (DUF1471) K12151 bhsA; multiple stress resistance protein BhsA
D Rahaq2_3821 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rahaq2_4117 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Rahaq2_0659 DNA topoisomerase IV, A subunit, proteobacterial K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rahaq2_0656 DNA topoisomerase IV, B subunit, proteobacterial K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rahaq2_1194 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D Rahaq2_0816 Protein of unknown function (DUF1434) K19168 cptA; toxin CptA
D Rahaq2_0815 hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C Rahaq2_1105 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C Rahaq2_5101 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023