+D GENES KO
#
KEGG Orthology (KO) - Rhodospirillum centenum
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rce00010]
D RC1_3514 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RC1_3592 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RC1_1852 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RC1_4065 cbbF; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RC1_1304 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RC1_1822 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RC1_4068 cbbA; fructose-1,6-bisphosphate aldolase/sedoheptulose-1,7-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RC1_0112 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RC1_1818 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RC1_3381 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RC1_3965 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RC1_0117 eno; phosphopyruvate hydratase, putative K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RC1_2135 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RC1_2401 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RC1_1667 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RC1_3562 ppsA; phosphoenolpyruvate synthase, putative K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RC1_1251 pyruvate dehydrogenase, putative K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RC1_0119 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RC1_0120 pdhB; pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RC1_0121 pdhC; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_3506 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RC1_0269 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RC1_3355 oxidoreductase, zinc-binding dehydrogenase family K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_2336 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_3030 acetyl-CoA synthetase, putative K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_2822 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rce00020]
D RC1_1192 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D RC1_3363 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RC1_0906 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RC1_2264 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RC1_2263 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2188 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RC1_2187 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RC1_0310 succinyl-CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RC1_3941 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RC1_3942 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RC1_3939 sdhC; succinate dehydrogenase, cytochrome b556, putative K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RC1_3940 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RC1_1865 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RC1_4080 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RC1_2822 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RC1_1251 pyruvate dehydrogenase, putative K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RC1_0119 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RC1_0120 pdhB; pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RC1_0121 pdhC; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rce00030]
D RC1_3592 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RC1_4063 cbbE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RC1_2350 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RC1_4067 cbbT; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RC1_1817 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RC1_3769 transketolase, putative K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RC1_2255 talC; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RC1_1343 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RC1_2267 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RC1_1952 rbsK; ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15]
D RC1_1906 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RC1_3887 gcd; quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D RC1_3591 gnl; putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RC1_2136 ttuD; hydroxypyruvate reductase, putative K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RC1_1822 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RC1_4068 cbbA; fructose-1,6-bisphosphate aldolase/sedoheptulose-1,7-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RC1_4065 cbbF; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RC1_1304 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RC1_1852 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rce00040]
D RC1_1698 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RC1_1699 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RC1_4063 cbbE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RC1_2350 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RC1_3767 aldehyde dehydrogenase, putative K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D RC1_3135 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:rce00051]
D RC1_0837 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RC1_0172 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RC1_1697 algC; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RC1_4029 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RC1_4030 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RC1_3135 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RC1_1852 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RC1_4065 cbbF; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RC1_1304 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RC1_1822 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RC1_4068 cbbA; fructose-1,6-bisphosphate aldolase/sedoheptulose-1,7-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RC1_0112 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RC1_1343 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RC1_2869 PTS system fructose, IIA component, putative K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rce00052]
D RC1_4032 exoB; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RC1_3991 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RC1_1699 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RC1_3514 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RC1_1852 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RC1_1702 aglA; alpha-glucosidase, putative K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RC1_3326 aglA; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rce00053]
D RC1_1698 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RC1_3591 gnl; putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RC1_0233 capsular polysaccharide biosynthesis protein I, putative K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rce00500]
D RC1_1702 aglA; alpha-glucosidase, putative K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RC1_3326 aglA; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RC1_1699 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RC1_3988 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_3996 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_3780 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_2745 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RC1_2746 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RC1_1747 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RC1_0515 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RC1_0864 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RC1_2119 treZ; probable maltokinase K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D RC1_0516 treS; trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D RC1_1748 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RC1_0519 Alpha amylase, catalytic domain family, putative K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D RC1_0230 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RC1_2270 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RC1_2268 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D RC1_3515 otsA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RC1_1412 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D RC1_3514 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RC1_3592 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RC1_0837 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rce00520]
D RC1_0396 chitinase class II protein, putative K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RC1_1027 beta-glucosidase-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RC1_1413 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RC1_0837 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RC1_3347 glmS; glucosamine--fructose-6-phosphate aminotransferase [isomerizing], putative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RC1_1794 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RC1_1594 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RC1_1621 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RC1_3152 nucleotidyl transferase, putative K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RC1_1653 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RC1_0610 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, putative K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RC1_3771 nans; N-acetylneuraminic acid synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132]
D RC1_3768 neuA; acylneuraminate cytidylyltransferase, putative K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D RC1_3802 NAD dependent epimerase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RC1_4028 rfbB; dTDP-D-glucose 4,6-dehydratase, putative K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RC1_2544 exoB; UDP-glucose 4-epimerase K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5]
D RC1_3514 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RC1_1699 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RC1_1698 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RC1_2302 sulfolipid (UDP-sulfoquinovose) biosynthesis protein, putative K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RC1_4032 exoB; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RC1_3991 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RC1_0233 capsular polysaccharide biosynthesis protein I, putative K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RC1_2869 PTS system fructose, IIA component, putative K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RC1_3592 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RC1_1697 algC; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RC1_0172 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RC1_4029 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RC1_4030 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RC1_3988 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_3996 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_3780 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_3779 rfbG; CDP-glucose 4,6-dehydratase, putative K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RC1_0527 rfbE; CDP-paratose 2-epimerase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D RC1_2745 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rce00620]
D RC1_2336 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_3030 acetyl-CoA synthetase, putative K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_1251 pyruvate dehydrogenase, putative K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RC1_0119 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RC1_0120 pdhB; pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RC1_0121 pdhC; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_0269 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RC1_3355 oxidoreductase, zinc-binding dehydrogenase family K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RC1_2135 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RC1_2401 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RC1_2670 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RC1_0929 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RC1_0928 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RC1_2833 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RC1_0411 acylphosphatase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_0310 succinyl-CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RC1_3506 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RC1_0598 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RC1_2914 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RC1_3431 gloB; glyoxalase II, putative K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RC1_2479 metallo-beta-lactamase superfamily K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RC1_3398 2-hydroxyacid dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RC1_3260 tme; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RC1_0405 dme; NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RC1_4080 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RC1_1865 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RC1_2446 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RC1_2822 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RC1_1667 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RC1_3562 ppsA; phosphoenolpyruvate synthase, putative K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RC1_2688 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_1969 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RC1_0977 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RC1_3693 nifV; homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rce00630]
D RC1_2686 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RC1_2336 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_3030 acetyl-CoA synthetase, putative K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_2688 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RC1_4080 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RC1_1192 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D RC1_3363 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3949 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RC1_3580 MaoC-like dehydratase, putative K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D RC1_1223 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RC1_0412 pccA; propionyl-CoA carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RC1_0418 pccB; propionyl-CoA carboxylase, beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RC1_3119 bhbA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RC1_2152 glcD; glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RC1_2151 glcE; glycolate oxidase, subunit glcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RC1_2148 glcF; glycolate oxidase, iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RC1_2172 kat; catalase K03781 katE; catalase [EC:1.11.1.6]
D RC1_3548 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D RC1_3133 gyaR; glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D RC1_3398 2-hydroxyacid dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RC1_1595 cbbZC; phosphoglycolate phosphatase, bacterial K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RC1_0134 HAD-superfamily hydrolase, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RC1_3499 haloacid dehalogenase-like hydrolase, putative K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RC1_0420 HAD-superfamily hydrolase, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RC1_4069 cbbZ; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RC1_4061 cbbL1; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RC1_0239 cbbL2; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RC1_4062 cbbS1; ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RC1_0240 ccbS2; ribulose bisphosphate carboxylase, small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RC1_1258 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1465 glutamine synthetase, putative K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1466 puuA; gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RC1_3658 gcvPA; glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RC1_3659 gcvPB; glycine cleavage system P-protein subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RC1_3656 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_3657 gcvH; glycine cleavage systemh protein K02437 gcvH; glycine cleavage system H protein
D RC1_2136 ttuD; hydroxypyruvate reductase, putative K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RC1_2776 cyclase, putative K07130 kynB; arylformamidase [EC:3.5.1.9]
D RC1_0137 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RC1_3237 hutG; N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:rce00640]
D RC1_2336 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_3030 acetyl-CoA synthetase, putative K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_1843 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RC1_2670 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RC1_0929 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RC1_0928 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RC1_2833 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RC1_1469 omega-amino acid:pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RC1_0412 pccA; propionyl-CoA carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RC1_0418 pccB; propionyl-CoA carboxylase, beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RC1_1223 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RC1_3119 bhbA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RC1_2187 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RC1_2188 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RC1_3805 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RC1_3806 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D RC1_3804 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D RC1_3506 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:rce00650]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_4107 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RC1_0547 peroxisomal bifunctional enzyme K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_3580 MaoC-like dehydratase, putative K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D RC1_0541 phaC; Polyhydroxyalkanoic acid synthase, putative K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RC1_1308 phbC; poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RC1_2430 phaZ; intracellular PHB depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RC1_3949 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RC1_3941 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RC1_3942 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RC1_3939 sdhC; succinate dehydrogenase, cytochrome b556, putative K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RC1_3940 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RC1_0997 aminotransferase, class III K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D RC1_1593 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RC1_0310 succinyl-CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RC1_0377 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RC1_2504 3-oxoadipate CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RC1_2505 3-oxoadipate CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RC1_1846 bdhA; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RC1_1975 ilvI; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1479 ilvG; acetolactate synthase isozyme II large subunit, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_0235 ilvB; acetolactate synthase large subunit, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1775 thiamine pyrophosphate enzyme, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1974 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rce00660]
D RC1_1975 ilvI; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1479 ilvG; acetolactate synthase isozyme II large subunit, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_0235 ilvB; acetolactate synthase large subunit, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1775 thiamine pyrophosphate enzyme, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1974 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RC1_2187 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RC1_2188 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RC1_2333 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RC1_3961 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RC1_3962 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rce00562]
D RC1_1829 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RC1_0768 Myo-inositol-1-phosphate synthase, putative K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RC1_0294 phy; 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D RC1_0112 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rce00190]
D RC1_1240 nuoA; NADH-quinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RC1_1239 nuoB; NADH-quinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RC1_1238 nuoC; NADH-quinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RC1_1237 nuoD; NADH-quinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RC1_1236 nuoE; NADH-quinone oxidoreductase chain E, putative K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RC1_1235 nuoF; NADH-quinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RC1_1234 nuoG; NADH-quinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RC1_1233 nuoH; NADH-quinone oxidoreductase chainh K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RC1_1232 nuoI; NADH-quinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RC1_1231 nuoJ; NADH-quinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RC1_1230 nuoK; NADH-quinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RC1_1229 nuoL; NADH-quinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RC1_1228 nuoM; NADH-quinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RC1_1227 nuoN; NADH-quinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RC1_3941 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RC1_3942 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RC1_3939 sdhC; succinate dehydrogenase, cytochrome b556, putative K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RC1_3940 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RC1_2445 rieske iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RC1_3422 petA; ubiquinol-Cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RC1_3424 petC; cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RC1_3423 petB; cytochrome b K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D RC1_3632 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RC1_3635 coxC; cytochrome c oxidase subunit III (Heme/copper-type cytochrome/quinol oxidases) K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RC1_3631 ctaD; cytochrome c oxidase, subunit I (Heme/copper-type cytochrome/quinol oxidases) K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RC1_0781 coxA; cytochrome c oxidase, subunit I (Heme/copper-type cytochrome/quinol oxidase) K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RC1_3630 ctaC; cytochrome c oxidase, subunit II (Heme/copper-type cytochrome/quinol oxidases) K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RC1_0780 coxB; Cytochrome c oxidase subunit II (Heme/copper-type cytochrome/quinol oxidase) K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RC1_3634 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RC1_2704 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RC1_1280 ccoN; cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RC1_1279 ccoO; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RC1_1278 ccoQ; cytochrome c oxidase, Cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RC1_1277 ccoP; cytochrome c oxidase, Cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RC1_4036 cytochrome D ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RC1_0415 cioA; ubiquinol oxidase subunit I, cyanide insensitive K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RC1_0287 quinol oxidase subunit I, putative K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RC1_4035 cydB; cytochrome D ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RC1_0416 cioB; ubiquinol oxidase subunit II, cyanide insensitive K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RC1_0285 quinol oxidase, subunit II, putative K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RC1_4034 ybgT; cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D RC1_3981 cytochrome c2 iso-1 K08738 CYC; cytochrome c
D RC1_2102 c552; cytochrome c2 iso-2 (c552) K08738 CYC; cytochrome c
D RC1_3404 cycM; cytochrome c K08738 CYC; cytochrome c
D RC1_0368 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RC1_2243 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RC1_0361 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RC1_2241 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RC1_0369 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RC1_2242 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RC1_2244 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RC1_0362 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RC1_2240 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RC1_0365 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RC1_3510 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RC1_0367 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RC1_3512 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RC1_3513 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RC1_0366 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RC1_3511 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RC1_2766 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RC1_1544 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:rce00710]
D RC1_4061 cbbL1; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RC1_0239 cbbL2; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RC1_4062 cbbS1; ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RC1_0240 ccbS2; ribulose bisphosphate carboxylase, small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RC1_3381 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RC1_1818 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RC1_1822 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RC1_4068 cbbA; fructose-1,6-bisphosphate aldolase/sedoheptulose-1,7-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RC1_4065 cbbF; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RC1_1304 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RC1_4067 cbbT; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RC1_1817 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RC1_3769 transketolase, putative K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RC1_1343 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RC1_4066 cbbP; phosphoribulokinase I K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D RC1_0112 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RC1_4063 cbbE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RC1_2350 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RC1_2446 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RC1_2822 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RC1_1667 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RC1_3260 tme; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RC1_0405 dme; NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RC1_4080 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rce00680]
D RC1_0269 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RC1_1342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RC1_2136 ttuD; hydroxypyruvate reductase, putative K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RC1_0117 eno; phosphopyruvate hydratase, putative K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RC1_2446 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RC1_4080 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RC1_1822 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RC1_4068 cbbA; fructose-1,6-bisphosphate aldolase/sedoheptulose-1,7-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RC1_4065 cbbF; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RC1_1304 glpX; fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RC1_1852 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RC1_0144 frhB; coenzyme F420 hydrogenase K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D RC1_2336 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_3030 acetyl-CoA synthetase, putative K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_3562 ppsA; phosphoenolpyruvate synthase, putative K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RC1_3965 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RC1_1786 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RC1_1788 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RC1_1979 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rce00910]
D RC1_0457 napA; periplasmic nitrate reductase, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D RC1_0458 napB; Diheme cytochrome c napB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D RC1_3976 norB; nitric oxide reductase NorB, putative K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D RC1_3912 nosZ; nitrous oxide reductase NosZ K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D RC1_3682 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RC1_3681 nifK; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RC1_3683 nifH; NifH, 4Fe-4S iron sulfur cluster binding protein K02588 nifH; nitrogenase iron protein NifH
D RC1_3258 oxidoreductase, 2-nitropropane dioxygenase family K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RC1_2702 gdhA; NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RC1_1258 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1465 glutamine synthetase, putative K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1466 puuA; gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_3193 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RC1_3195 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RC1_3827 cynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RC1_2781 cah; carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rce00920]
D RC1_3864 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RC1_3865 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RC1_3866 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RC1_3867 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RC1_2183 cysNC; Bifunctional enzyme cysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RC1_2182 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RC1_1602 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RC1_2181 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RC1_0467 NAD-binding flavodoxin, putative K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D RC1_2179 cysI; sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RC1_3924 sqr; sulfide-quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RC1_1149 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RC1_1619 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RC1_2198 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RC1_3047 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RC1_4083 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RC1_0523 Cys K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RC1_2590 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RC1_3286 alkK; medium-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RC1_1632 acyl-CoA dehydrogenase, putative K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RC1_1946 acyl-CoA dehydrogenase, putative K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rce00061]
D RC1_2670 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RC1_0929 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RC1_0928 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RC1_2833 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RC1_1570 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RC1_0747 conserved domain protein K02078 acpP; acyl carrier protein
D RC1_1572 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RC1_1327 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RC1_1569 fabF; beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RC1_1571 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RC1_1197 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RC1_0577 fabI; Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RC1_0650 enoyl-acyl carrier protein reductase, putative K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RC1_2645 fabK; enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RC1_3673 lcfA; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2696 AMP-dependent synthetase and ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_3535 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2964 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rce00071]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_1948 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_0547 peroxisomal bifunctional enzyme K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RC1_1018 acyl-CoA dehydrogenase, putative K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RC1_0378 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D RC1_0143 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RC1_3673 lcfA; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2696 AMP-dependent synthetase and ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_3535 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2964 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_0393 alkB; alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RC1_0269 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rce00561]
D RC1_2136 ttuD; hydroxypyruvate reductase, putative K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_3355 oxidoreductase, zinc-binding dehydrogenase family K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RC1_0267 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RC1_1328 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RC1_1526 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RC1_4095 acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RC1_2302 sulfolipid (UDP-sulfoquinovose) biosynthesis protein, putative K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:rce00564]
D RC1_2361 gpsA; Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RC1_0265 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RC1_1526 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RC1_4095 acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RC1_3579 pldB; lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D RC1_2941 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RC1_2887 glycerophosphoryl diester phosphodiesterase, putative K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RC1_0289 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RC1_1556 pmtA; phospholipid N-methyltransferase, putative K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D RC1_1203 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RC1_1051 pcs; phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D RC1_1431 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RC1_1432 phosphatidylserine decarboxylase-like protein, putative K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RC1_2457 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D RC1_1549 CDP-alcohol phosphatidyltransferase, putative K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D RC1_1886 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rce00592]
D RC1_1948 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rce01040]
D RC1_1736 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RC1_3088 GDSL-like Lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RC1_1370 acyl-CoA thioester hydrolase, putative K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rce00230]
D RC1_1151 conserved hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RC1_1906 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RC1_1585 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RC1_3604 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RC1_1552 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RC1_4071 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D RC1_0988 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RC1_3361 purS; phosphoribosylformylglycinamidine synthase, PurS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RC1_0989 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RC1_1551 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RC1_1849 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RC1_1850 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RC1_3360 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RC1_3387 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RC1_2352 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RC1_1445 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RC1_0808 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RC1_1035 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RC1_1904 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RC1_0155 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RC1_1554 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RC1_2961 rdgB; HAM1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RC1_2738 xanthine phosphoribosyltransferase, putative K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D RC1_3070 yagR; xanthine dehydrogenase yagR molybdenum-binding subunit, putative K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D RC1_3069 yagS; xanthine dehydrogenase yagS FAD-binding subunit,putative K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RC1_3068 oxidoreductase With iron-sulfur subunit, putative K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D RC1_3972 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RC1_1684 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RC1_1560 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RC1_0921 nrdJ; B12-dependent ribonucleoside diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_4094 ribonucleoside-diphosphate reductase, putative K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_3477 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_3496 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RC1_0319 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RC1_1024 dgt; deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1]
D RC1_3756 conserved hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RC1_1499 guanosine polyphosphate phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RC1_1543 Ppx K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RC1_0153 phosphatase, Ppx K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RC1_2226 cyaB; adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RC1_2616 adenylate cyclase, putative K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RC1_0904 cyaA; adenylate cyclase 1 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RC1_0974 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RC1_1720 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RC1_3721 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RC1_3927 amn; AMP nucleosidase, putative K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D RC1_0252 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RC1_1809 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RC1_0732 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RC1_0140 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RC1_1451 phosphodiesterase, putative K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RC1_2183 cysNC; Bifunctional enzyme cysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RC1_2182 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:rce00240]
D RC1_2014 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RC1_2010 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RC1_1524 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RC1_1525 pyrC'; dihydroorotase-like protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RC1_3573 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RC1_2863 pyrD; dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RC1_3572 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RC1_2690 orotate phosphoribosyltransferase, putative K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RC1_3094 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RC1_1206 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RC1_1554 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RC1_0140 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RC1_2800 conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RC1_1646 maf; maf protein, putative K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RC1_0114 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RC1_2488 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RC1_0808 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RC1_1035 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RC1_3121 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RC1_0252 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RC1_1809 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RC1_0645 Indigoidine synthase A like protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D RC1_2266 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RC1_0319 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RC1_1654 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RC1_0921 nrdJ; B12-dependent ribonucleoside diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_4094 ribonucleoside-diphosphate reductase, putative K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_3477 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_3496 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RC1_3756 conserved hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RC1_2683 tmk; thymidylate kinase, putative K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RC1_3043 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RC1_2274 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RC1_1943 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RC1_2002 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RC1_2613 NADH dehydrogenase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rce00250]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_2990 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RC1_0431 aspartate racemase, putative K01779 racD; aspartate racemase [EC:5.1.1.13]
D RC1_1422 aspG; L-asparaginase, putative K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RC1_4027 asnB; asparagine synthase (glutamine-hydrolyzing), putative K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RC1_3781 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RC1_3544 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RC1_0762 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RC1_2886 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RC1_4103 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RC1_1720 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RC1_3387 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RC1_1524 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RC1_0997 aminotransferase, class III K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D RC1_1593 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RC1_3193 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RC1_3195 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RC1_2702 gdhA; NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RC1_1781 putA; proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RC1_1258 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1465 glutamine synthetase, putative K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1466 puuA; gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_2014 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RC1_2010 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RC1_0989 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RC1_3347 glmS; glucosamine--fructose-6-phosphate aminotransferase [isomerizing], putative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RC1_1585 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rce00260]
D RC1_2646 lysC; aspartokinase (asparate kinase) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RC1_3933 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RC1_1305 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RC1_3648 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D RC1_3642 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RC1_1727 ltaE; low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RC1_1342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RC1_3398 2-hydroxyacid dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RC1_2136 ttuD; hydroxypyruvate reductase, putative K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RC1_3965 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RC1_1786 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RC1_1788 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RC1_1979 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RC1_2103 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RC1_0996 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RC1_3921 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RC1_3658 gcvPA; glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RC1_3659 gcvPB; glycine cleavage system P-protein subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RC1_3656 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_3657 gcvH; glycine cleavage systemh protein K02437 gcvH; glycine cleavage system H protein
D RC1_1431 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RC1_1987 cbs; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RC1_1986 cystathionine gamma-synthase (CGS) (O-succinylhomoserine(Thiol)-lyase) K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RC1_0779 threonine dehydratase, putative K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RC1_3167 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RC1_2830 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RC1_2829 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rce00270]
D RC1_1619 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RC1_2198 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RC1_3047 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RC1_1986 cystathionine gamma-synthase (CGS) (O-succinylhomoserine(Thiol)-lyase) K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RC1_1147 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RC1_1987 cbs; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RC1_2972 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RC1_0642 mtnN; Mta K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RC1_3039 mtnK; 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D RC1_1904 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RC1_2726 translation initiation factor 2B subunit, putative K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D RC1_2714 ahcY; adenosylhomocysteinase, putative K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RC1_2646 lysC; aspartokinase (asparate kinase) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RC1_3933 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RC1_1305 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RC1_4083 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RC1_0523 Cys K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RC1_1319 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RC1_2590 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RC1_0573 ilvE; branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_1891 ilvE; Branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_3628 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RC1_2878 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_1149 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RC1_3506 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RC1_4080 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RC1_0266 Malate/L-lactate dehydrogenase family protein K16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338]
D RC1_1786 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RC1_1788 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rce00280]
D RC1_0573 ilvE; branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_1891 ilvE; Branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_1776 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_1018 acyl-CoA dehydrogenase, putative K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RC1_0401 ivd2; isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RC1_1948 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RC1_0412 pccA; propionyl-CoA carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RC1_0418 pccB; propionyl-CoA carboxylase, beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RC1_1223 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RC1_3119 bhbA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RC1_1347 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_2325 Long-chain-fatty-acid--CoA ligase, putative K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RC1_1469 omega-amino acid:pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RC1_0381 mccA; methylcrotonoyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RC1_0390 mccB; Methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RC1_0385 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RC1_0377 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RC1_2504 3-oxoadipate CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RC1_2505 3-oxoadipate CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rce00290]
D RC1_0779 threonine dehydratase, putative K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RC1_3167 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RC1_2333 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RC1_3961 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RC1_3962 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RC1_1975 ilvI; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1479 ilvG; acetolactate synthase isozyme II large subunit, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_0235 ilvB; acetolactate synthase large subunit, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1775 thiamine pyrophosphate enzyme, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1974 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RC1_1973 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RC1_1163 ilvD; dihydroxy-acid dehydratase, putative K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RC1_0573 ilvE; branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_1891 ilvE; Branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_1776 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RC1_1969 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RC1_0977 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rce00300]
D RC1_1305 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RC1_2646 lysC; aspartokinase (asparate kinase) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RC1_3933 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RC1_1506 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RC1_3162 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RC1_2292 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RC1_2476 argD; acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RC1_3661 aminotransferase, classes I and II K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RC1_2293 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RC1_2197 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RC1_4101 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RC1_1016 diaminopimelate decarboxylase, putative K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RC1_0618 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RC1_0617 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rce00310]
D RC1_2263 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_0143 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_1593 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RC1_1521 CaiB K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D RC1_2506 kamA; L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D RC1_3529 conserved hypothetical protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D RC1_0133 D-alanine aminotransferase, putative K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rce00220]
D RC1_2475 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RC1_2886 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RC1_4103 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RC1_0989 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RC1_1258 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1465 glutamine synthetase, putative K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1466 puuA; gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_2702 gdhA; NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_2665 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RC1_2288 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RC1_1311 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RC1_2476 argD; acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rce00330]
D RC1_3855 creatininase, putative K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RC1_1450 Creatinine amidohydrolase, putative K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RC1_3712 hyuA; hydantoin utilization protein A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RC1_3713 huyB; N-methylhydantoinase B (HuyB-1) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D RC1_1456 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D RC1_0659 hydrolase, carbon-nitrogen family K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D RC1_3009 ldc; lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RC1_1717 lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RC1_1357 ldc; lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RC1_1461 aminotransferase, class III K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_1452 puuC; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D RC1_3921 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RC1_1468 FAD dependent oxidoreductase, putative K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D RC1_0557 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RC1_1898 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RC1_1781 putA; proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RC1_0445 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RC1_1913 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RC1_2236 pip; proline iminopeptidase Pip, putative K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_0133 D-alanine aminotransferase, putative K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:rce00340]
D RC1_1651 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RC1_1719 hisZ; ATP phosphoribosyltransferase regulatory subunit, putative K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RC1_3300 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RC1_1146 hisL; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RC1_3298 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RC1_3296 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RC1_3299 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RC1_3295 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RC1_4085 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RC1_3403 suhB; inositol-1-monophosphatase, putative K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D RC1_1650 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RC1_3238 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RC1_3236 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RC1_3234 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RC1_3235 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D RC1_3237 hutG; N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_3921 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RC1_0903 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:rce00350]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_4085 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RC1_3343 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RC1_2510 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RC1_2508 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D RC1_2509 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D RC1_3921 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RC1_0269 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RC1_1593 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RC1_0147 fumarylacetoacetate (FAA) hydrolase, putative K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rce00360]
D RC1_3346 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RC1_3921 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_4107 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_4085 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RC1_3343 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RC1_0133 D-alanine aminotransferase, putative K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism [PATH:rce00380]
D RC1_2780 Tryptophan 2,3-dioxygenase, putative K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D RC1_2776 cyclase, putative K07130 kynB; arylformamidase [EC:3.5.1.9]
D RC1_2772 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D RC1_2263 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_0143 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3921 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_2172 kat; catalase K03781 katE; catalase [EC:1.11.1.6]
D RC1_3548 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rce00400]
D RC1_0952 aroF; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RC1_2675 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RC1_0930 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RC1_2801 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RC1_2676 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RC1_2492 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RC1_0576 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RC1_0109 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RC1_0105 trpG; anthranilate synthase component II, putative K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RC1_0104 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RC1_3095 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RC1_3385 trpF; N-(5'phosphoribosyl)anthranilate isomerase, putative K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RC1_0103 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RC1_2830 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RC1_2829 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RC1_4084 Chorismate mutase, putative K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RC1_4086 tyrA; prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D RC1_3406 prephenate dehydratase, putative K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_4085 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RC1_3346 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rce00410]
D RC1_2273 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_0595 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RC1_1469 omega-amino acid:pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:rce00430]
D RC1_2162 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RC1_3131 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RC1_0762 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RC1_2702 gdhA; NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism [PATH:rce00440]
D RC1_0525 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RC1_1171 metallo-beta-lactamase superfamily K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rce00450]
D RC1_0523 Cys K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RC1_1147 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RC1_1986 cystathionine gamma-synthase (CGS) (O-succinylhomoserine(Thiol)-lyase) K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RC1_0490 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RC1_0635 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RC1_3155 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RC1_3558 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RC1_2183 cysNC; Bifunctional enzyme cysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RC1_2182 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RC1_1169 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rce00460]
D RC1_2162 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RC1_3131 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RC1_1422 aspG; L-asparaginase, putative K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RC1_1342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rce00470]
D RC1_1578 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RC1_0133 D-alanine aminotransferase, putative K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RC1_0609 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RC1_0989 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RC1_3325 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RC1_0615 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RC1_3470 mandelate racemase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RC1_0431 aspartate racemase, putative K01779 racD; aspartate racemase [EC:5.1.1.13]
D RC1_2197 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RC1_4101 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RC1_1016 diaminopimelate decarboxylase, putative K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RC1_3715 FAD dependent oxidoreductase, putative K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
C 00480 Glutathione metabolism [PATH:rce00480]
D RC1_2162 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RC1_3131 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RC1_4092 chaC; cation transport protein ChaC, putative K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D RC1_0628 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D RC1_3628 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RC1_2878 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RC1_2330 pepB; leucyl aminopeptidase PepB, putative K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RC1_1566 pepA; leucyl aminopeptidase PepA, putative K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RC1_1953 pepN; aminopeptidase N, PepN, putative K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RC1_3278 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_3194 glutathione S-transferase family protein, putative K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_2329 gst; glutathione S-transferase, putative K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_3430 glutathione S-transferase family protein, putative K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_2897 MAPEG family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_1877 glutathione S-transferase family protein, putative K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_1589 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D RC1_0906 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RC1_4045 gpo; glutathione peroxidase, putative K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RC1_1379 glutathione peroxidase, putative K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RC1_3646 peroxiredoxin, putative K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RC1_3009 ldc; lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RC1_1717 lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RC1_1357 ldc; lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rce00540]
D RC1_1196 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RC1_0605 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RC1_1198 lpxD; UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase, putative K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RC1_1195 conserved hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RC1_1194 lpxB; lipid-A-disaccharide synthase, putative K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RC1_3613 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RC1_3797 sugar isomerase, KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RC1_0115 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RC1_3405 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase, putative K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RC1_3614 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RC1_3612 htrB; lipid A biosynthesis lauroyl acyltransferase, putative K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RC1_0829 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RC1_2528 hldE; bifunctional protein hldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RC1_0817 D,D-heptose 1,7-bisphosphate phosphatase 1, putative K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RC1_1901 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rce00541]
D RC1_1699 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RC1_4032 exoB; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RC1_3991 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RC1_1698 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RC1_0233 capsular polysaccharide biosynthesis protein I, putative K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RC1_0818 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RC1_0771 glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RC1_0816 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RC1_3987 dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_4073 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_3777 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_4072 rfbD; dTDP-4-dehydrorhamnose reductase, putative K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RC1_3988 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_3996 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_3780 rfbF; glucose-1-phosphate cytidylyltransferase, putative K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RC1_3779 rfbG; CDP-glucose 4,6-dehydratase, putative K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RC1_0527 rfbE; CDP-paratose 2-epimerase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D RC1_0172 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RC1_1697 algC; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RC1_4029 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RC1_4030 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RC1_1594 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:rce00550]
D RC1_1653 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RC1_0610 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, putative K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RC1_0612 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RC1_0615 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RC1_0618 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RC1_0609 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RC1_0617 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RC1_1204 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RC1_3196 uppP; undecaprenyl-diphosphatase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RC1_3550 PAP2 superfamily K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RC1_0616 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RC1_0613 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RC1_3308 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase, putative K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RC1_1608 mrcA; penicillin-binding protein 1A (PBP-1a) (PBP1a) MrcA, putative K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RC1_2700 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RC1_1965 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RC1_0619 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RC1_1167 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:rce00552]
D RC1_3196 uppP; undecaprenyl-diphosphatase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RC1_3550 PAP2 superfamily K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rce00543]
D RC1_4005 wcaI; colanic acid biosynthesis glycosyl transferase WcaI, putative K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D RC1_0657 glycosyl transferase, group 2 family protein K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-]
D RC1_1619 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RC1_2198 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RC1_2535 gumK; glucuronosyltransferase, putative K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264]
D RC1_2571 glycosyl transferase, putative K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rce00730]
D RC1_3970 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RC1_1793 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RC1_1616 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_0478 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_3102 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RC1_0565 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RC1_3100 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RC1_1824 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RC1_1335 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RC1_0732 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RC1_1613 tena K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:rce00740]
D RC1_2933 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RC1_1338 ribAB; Riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RC1_1340 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RC1_1337 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RC1_1339 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RC1_3582 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RC1_3717 bluB; cob(II)yrinic acid a,c-diamide reductase, putative K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D RC1_1151 conserved hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RC1_1856 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rce00750]
D RC1_0584 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RC1_3931 pdxY; Pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RC1_1788 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RC1_1562 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RC1_1497 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RC1_3642 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rce00760]
D RC1_2990 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RC1_2989 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RC1_2991 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RC1_0964 conserved hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RC1_0808 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RC1_1035 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RC1_1914 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase, putative K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RC1_0140 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RC1_2237 peroxisomal NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RC1_0958 nadE; glutamine-dependent NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RC1_0125 cinA; competence/damage-inducible protein CinA, putative K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RC1_1683 pncA; pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RC1_2898 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RC1_1763 inorganic polyphosphate/ATP-NAD kinase, putative K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RC1_2073 pntAB; NAD(P) transhydrogenase subunit alpha part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RC1_2074 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RC1_2072 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RC1_1593 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rce00770]
D RC1_1975 ilvI; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1479 ilvG; acetolactate synthase isozyme II large subunit, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_0235 ilvB; acetolactate synthase large subunit, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1775 thiamine pyrophosphate enzyme, putative K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RC1_1974 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RC1_1973 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RC1_1163 ilvD; dihydroxy-acid dehydratase, putative K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RC1_3500 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RC1_3452 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RC1_0595 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RC1_1225 transcriptional regulator, Baf family protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RC1_3042 coaBC; phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RC1_0140 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RC1_1060 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RC1_2802 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RC1_1496 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RC1_0573 ilvE; branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_1891 ilvE; Branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_2273 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rce00780]
D RC1_1569 fabF; beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RC1_1571 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RC1_1197 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RC1_0577 fabI; Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RC1_0650 enoyl-acyl carrier protein reductase, putative K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RC1_0748 bioF; 8-amino-7-oxononanoate synthase, putative K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RC1_1226 birA; biotin-[acetyl-CoA-carboxylase] ligase, birA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rce00785]
D RC1_0407 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RC1_0123 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_1251 pyruvate dehydrogenase, putative K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RC1_0119 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RC1_0120 pdhB; pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RC1_0121 pdhC; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RC1_2264 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RC1_2263 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RC1_3658 gcvPA; glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RC1_3659 gcvPB; glycine cleavage system P-protein subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RC1_3656 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RC1_3657 gcvH; glycine cleavage systemh protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rce00790]
D RC1_2374 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RC1_2391 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_0246 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_0290 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_0026 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_4042 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_3172 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RC1_1501 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RC1_1795 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RC1_1989 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RC1_2834 folC; FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RC1_2933 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RC1_1338 ribAB; Riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RC1_0571 pabB; para-aminobenzoate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D RC1_2997 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RC1_3346 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RC1_1762 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RC1_0102 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RC1_1889 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RC1_3185 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RC1_0101 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RC1_0786 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RC1_1068 molybdopterin binding protein, putative K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D RC1_0451 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rce00670]
D RC1_1989 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RC1_2876 folD; FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RC1_1342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RC1_1552 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RC1_2352 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RC1_2296 fmt; methionyl-tRNA formyltransferase fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RC1_3656 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RC1_2002 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RC1_0137 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RC1_2050 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rce00860]
D RC1_2103 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RC1_0996 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RC1_0975 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_1191 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_1353 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RC1_2363 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RC1_2364 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RC1_2798 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RC1_3420 hemF; coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RC1_3176 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RC1_2796 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RC1_2797 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RC1_3547 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RC1_2177 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D RC1_3632 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RC1_2704 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RC1_3077 cobaltochelatase, CobS subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D RC1_3074 cobaltochelatase, CobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D RC1_0324 ATP:cob(1)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RC1_4111 ATP:cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RC1_0321 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RC1_2367 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RC1_0322 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RC1_3874 cobC; threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D RC1_0323 cobU; bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RC1_2370 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RC1_2371 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RC1_2369 phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RC1_2113 bchH; magnesium chelatase, H subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RC1_2082 bchD; magnesium-chelatase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RC1_2081 bchI; magnesium chelatase ATPase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RC1_2111 bchM; magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D RC1_0283 bchE; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D RC1_2105 acsF; magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D RC1_0282 bchJ; bacteriochlorophyll synthase 23 kDa chain K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D RC1_2112 bchL; light-independent protochlorophyllide reductase,iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D RC1_2115 bchN; light-independent protochlorophyllide reductase,N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D RC1_2114 bchB; light-independent protochlorophyllide reductase,B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D RC1_2078 bchG; geranylgeranyl bacteriochlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D RC1_2094 bchX; chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D RC1_2095 bchY; chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D RC1_2096 bchZ; chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D RC1_2116 bchF; 2-vinyl bacteriochlorophyllide hydratase, putative K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D RC1_2093 bchC; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase, putative K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D RC1_2080 bchP; geranylgeranyl reductase BchP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RC1_2824 conserved hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D RC1_3428 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rce00130]
D RC1_3625 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RC1_3622 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RC1_1856 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RC1_2647 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RC1_2782 ubiH; 2-polyprenyl-6-methoxyphenol 4-hydroxylase, putative K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RC1_3268 ubiE; ubiquinone K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RC1_2970 conserved hypothetical protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RC1_4119 ubiquinone biosynthesis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RC1_1936 wrbA; flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RC1_3343 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rce00900]
D RC1_0565 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RC1_1202 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RC1_0126 ispDF; IspD K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D RC1_3179 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RC1_2641 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RC1_3654 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_1856 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RC1_2077 idi; isopentenyl-diphosphate delta-isomerase, type 1 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RC1_0564 ispA; geranylgeranyl pyrophosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RC1_2091 crtE; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RC1_1676 ispB; octaprenyl-diphosphate synthase, putative K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RC1_1204 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RC1_2080 bchP; geranylgeranyl reductase BchP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rce00906]
D RC1_2086 crtB; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RC1_2085 crtI; phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RC1_2090 crtD; methoxyneurosporene dehydrogenase K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D RC1_2092 crtF; hydroxyneurosporene methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rce00907]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RC1_3530 peroxisomal trans-2-enoyl-CoA reductase K13774 atuB; citronellol/citronellal dehydrogenase
D RC1_3032 oxidoreductase, short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase
D RC1_3534 acyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D RC1_3531 acetyl-CoA carboxylase biotin carboxylase subunit, putative K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D RC1_3533 acetyl-CoA carboxylase carboxyltransferase K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D RC1_3532 enoyl-CoA hydratase K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D RC1_0377 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RC1_1948 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RC1_4067 cbbT; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RC1_1817 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RC1_3769 transketolase, putative K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rce00523]
D RC1_0818 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RC1_0771 glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RC1_0816 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RC1_3987 dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_4073 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_3777 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_4072 rfbD; dTDP-4-dehydrorhamnose reductase, putative K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RC1_0526 galE; UDP-glucose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures [PATH:rce01054]
D RC1_0431 aspartate racemase, putative K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D RC1_0816 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RC1_2771 acyII; penicillin acylase II, putative K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RC1_1360 acyII; penicillin acylase II, putative K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:rce00332]
D RC1_0445 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RC1_1913 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rce00261]
D RC1_2183 cysNC; Bifunctional enzyme cysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RC1_2182 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RC1_2646 lysC; aspartokinase (asparate kinase) K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RC1_3933 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RC1_1506 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RC1_3162 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rce00521]
D RC1_3514 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RC1_0768 Myo-inositol-1-phosphate synthase, putative K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RC1_1829 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RC1_0818 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RC1_0771 glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RC1_0816 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RC1_3987 dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_4073 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_3777 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase, putative K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RC1_4072 rfbD; dTDP-4-dehydrorhamnose reductase, putative K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RC1_3514 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rce00525]
D RC1_0818 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RC1_0771 glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RC1_0816 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rce00401]
D RC1_4086 tyrA; prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_4085 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RC1_0109 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RC1_0105 trpG; anthranilate synthase component II, putative K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RC1_1572 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RC1_1571 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RC1_0577 fabI; Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RC1_0650 enoyl-acyl carrier protein reductase, putative K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RC1_1570 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RC1_0747 conserved domain protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rce00999]
D RC1_2972 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RC1_2801 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rce00362]
D RC1_1948 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RC1_0547 peroxisomal bifunctional enzyme K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RC1_0143 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_4107 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rce00627]
D RC1_0411 acylphosphatase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RC1_1856 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:rce00364]
D RC1_1522 carboxymethylenebutenolidase, putative K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RC1_2805 carboxymethylenebutenolidase, putative K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rce00625]
D RC1_0269 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RC1_1358 betB; betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RC1_3681 nifK; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RC1_3683 nifH; NifH, 4Fe-4S iron sulfur cluster binding protein K02588 nifH; nitrogenase iron protein NifH
D RC1_3682 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rce00361]
D RC1_1522 carboxymethylenebutenolidase, putative K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RC1_2805 carboxymethylenebutenolidase, putative K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:rce00623]
D RC1_1522 carboxymethylenebutenolidase, putative K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RC1_2805 carboxymethylenebutenolidase, putative K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:rce00633]
D RC1_2701 morB; morphinone reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D RC1_1948 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rce00643]
D RC1_2510 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RC1_2508 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D RC1_2509 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:rce00930]
D RC1_0393 alkB; alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RC1_3591 gnl; putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RC1_3054 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RC1_1743 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rce00626]
D RC1_0269 adhC; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:rce00984]
D RC1_0549 oxidoreductase, short chain dehydrogenase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rce03020]
D RC1_0701 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RC1_0702 rpoC; DNA-directed RNA polymerase, beta' subunit, putative K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RC1_0735 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RC1_1500 rpoZ; DNA-directed RNA polymerase, omega subunit, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rce03010]
D RC1_2487 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RC1_1208 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RC1_0717 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RC1_0980 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RC1_0728 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RC1_1573 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RC1_0707 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RC1_0725 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RC1_1313 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RC1_0710 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RC1_0734 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RC1_0706 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RC1_0733 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RC1_0724 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RC1_2917 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RC1_2207 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RC1_0720 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RC1_1574 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RC1_0715 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RC1_3055 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RC1_2070 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RC1_0698 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RC1_0714 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RC1_0711 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RC1_0712 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RC1_0723 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RC1_0726 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RC1_0700 rplL; ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RC1_1575 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RC1_0699 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RC1_0697 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RC1_1314 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RC1_0721 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RC1_0730 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RC1_0718 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RC1_0736 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RC1_0727 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RC1_2210 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RC1_2313 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RC1_0448 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RC1_0716 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RC1_0713 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RC1_0722 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RC1_1907 ribosomal 5S rRNA E-loop binding protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RC1_0447 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RC1_3140 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RC1_0719 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RC1_0729 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RC1_1838 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RC1_1329 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RC1_1531 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RC1_2281 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RC1_2312 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RC1_2153 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RC1_0374 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3707 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_2630 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3538 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3541 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_0372 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_3704 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_2627 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_0373 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RC1_3703 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RC1_2626 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rce00970]
D RC1_2872 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_2628 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_3540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_3705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_2494 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_1085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RC1_3341 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RC1_3031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RC1_2736 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RC1_1155 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RC1_1241 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RC1_2735 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RC1_1157 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RC1_3968 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RC1_3191 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RC1_1302 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RC1_0692 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RC1_2377 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RC1_2497 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RC1_1256 tRNA-His K14226 tRNA-His; tRNA His
D RC1_2629 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RC1_3539 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RC1_3706 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RC1_4122 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RC1_0406 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RC1_3198 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RC1_1250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RC1_1962 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RC1_1963 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RC1_1061 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RC1_0939 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_0371 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_2625 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_3702 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_2063 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_1643 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RC1_1677 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RC1_1323 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RC1_1083 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RC1_2546 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RC1_1538 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RC1_0031 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RC1_1015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RC1_1657 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RC1_0687 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RC1_2434 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RC1_0694 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RC1_0691 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RC1_1243 tRNA-Val K14237 tRNA-Val; tRNA Val
D RC1_1597 tRNA-Val K14237 tRNA-Val; tRNA Val
D RC1_3518 tRNA-Val K14237 tRNA-Val; tRNA Val
D RC1_0975 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_1191 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_0161 glutamyl-tRNA(Gln) amidotransferase subunit A, putative K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RC1_1516 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RC1_0029 gatB; aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B, GatB putative K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RC1_1517 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RC1_0900 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RC1_1540 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RC1_1669 glyQ; glycyl-tRNA synthetase, alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RC1_1668 glyS; glycyl-tRNA synthetase, beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RC1_2819 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RC1_1034 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RC1_0976 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RC1_1169 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RC1_2296 fmt; methionyl-tRNA formyltransferase fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RC1_1162 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RC1_2551 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RC1_3585 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RC1_3305 lysS; lysyl-tRNA synthetase LysS K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RC1_1025 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RC1_1216 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RC1_3575 hisS; histidyl-tRNA synthetasehisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RC1_2315 pheS; phenylalanyl-tRNA synthetase, alpha subunit PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RC1_2318 pheT; phenylalanyl-tRNA synthetase, beta subunit PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RC1_1622 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RC1_2623 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rce03060]
D RC1_0731 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RC1_0695 secE; Preprotein translocase SecE subunit, putative K03073 secE; preprotein translocase subunit SecE
D RC1_0113 secG; preprotein translocase, SecG subunit, putative K03075 secG; preprotein translocase subunit SecG
D RC1_1042 secD; protein-export membrane protein SecD, putative K03072 secD; preprotein translocase subunit SecD
D RC1_0995 secF; protein-export membrane protein SecF, putative K03074 secF; preprotein translocase subunit SecF
D RC1_1012 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D RC1_1041 yajC; preprotein translocase subunit YajC, putative K03210 yajC; preprotein translocase subunit YajC
D RC1_2283 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RC1_2667 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RC1_2589 secB; protein-export chaperone SecB, putative K03071 secB; preprotein translocase subunit SecB
D RC1_2204 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RC1_2195 ftsY; cell division ABC transporter, periplasmic substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RC1_1011 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RC1_1031 conserved domain protein K03116 tatA; sec-independent protein translocase protein TatA
D RC1_0677 conserved domain protein K03116 tatA; sec-independent protein translocase protein TatA
D RC1_1032 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RC1_1033 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RC1_1495 lepB; signal peptidase I, LepB, putative K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RC1_3586 lspA; Lipoprotein signal peptidase II, LspA, putative K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rce04122]
D RC1_1616 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_0478 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_1149 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RC1_0561 conserved domain protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RC1_0938 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RC1_1889 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RC1_1762 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RC1_1888 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D RC1_3050 moeB; molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RC1_0102 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RC1_3185 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RC1_3101 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rce03018]
D RC1_3408 nudix family hydrolase, putative K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RC1_1611 rne; ribonuclease, Rne K08300 rne; ribonuclease E [EC:3.1.26.12]
D RC1_0117 eno; phosphopyruvate hydratase, putative K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RC1_2919 pnp; polyribonucleotide nucleotidyltransferase, putative K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RC1_1529 rnr; ribonuclease R, putative K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RC1_2432 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RC1_2794 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RC1_1224 metallo-beta-lactamase, putative K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RC1_3142 metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RC1_2858 dnaK; chaperone protein DnaK, putative K04043 dnaK; molecular chaperone DnaK
D RC1_2595 groL; chaperonin GroL, putative K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RC1_0135 hfq; protein hfq K03666 hfq; host factor-I protein
D RC1_3848 nfrA; host factor protein K03666 hfq; host factor-I protein
D RC1_1544 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RC1_3419 polyA polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rce03030]
D RC1_2803 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0992 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_1210 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RC1_2306 dnaX; DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RC1_1168 holB; ATPase i K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RC1_2553 holA; DNA polymerase III, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RC1_1567 holC; DNA polymerase III, chi subunit, HolC, putative K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RC1_3063 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RC1_1577 dnaB; replicative DNA helicase, putative K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RC1_2007 dnaG; DNA primase, catalytic core, putative K02316 dnaG; DNA primase [EC:2.7.7.101]
D RC1_1055 ssb; single-strand DNA binding protein, putative K03111 ssb; single-strand DNA-binding protein
D RC1_3647 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RC1_3174 rnhB; ribonucleasehII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RC1_2483 polA; DNA polymerase I, putative K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RC1_0601 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rce03410]
D RC1_2770 nth; endonuclease III, putative K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RC1_0510 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RC1_3052 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RC1_1221 DNA-3-methyladenine glycosylase I, putative K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RC1_3955 Uracil DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RC1_1503 uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RC1_3183 uracil-DNA glycosylase, family 4 protein, putative K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RC1_1022 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RC1_2792 endonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RC1_2483 polA; DNA polymerase I, putative K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RC1_1303 recJ; single-stranded-DNA-specific exonuclease RecJ, putative K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RC1_0601 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rce03420]
D RC1_1262 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RC1_1053 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D RC1_1881 uvrB; excinuclease ABC, B subunit, putative K03702 uvrB; excinuclease ABC subunit B
D RC1_1885 uvrC; excinuclease ABC, C subunit, putative K03703 uvrC; excinuclease ABC subunit C
D RC1_2036 UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RC1_2483 polA; DNA polymerase I, putative K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RC1_0601 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rce03430]
D RC1_2903 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RC1_3601 mutL; DNA mismatch repair protein MutL, putative K03572 mutL; DNA mismatch repair protein MutL
D RC1_2036 UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RC1_3609 xseA; exodeoxyribonuclease VII, large subunit, putative K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RC1_0563 xseB; exodeoxyribonuclease VII, small subunit, putative K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RC1_1303 recJ; single-stranded-DNA-specific exonuclease RecJ, putative K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RC1_1055 ssb; single-strand DNA binding protein, putative K03111 ssb; single-strand DNA-binding protein
D RC1_1210 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RC1_3063 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RC1_2306 dnaX; DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RC1_2553 holA; DNA polymerase III, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RC1_1168 holB; ATPase i K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RC1_2803 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0992 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_1567 holC; DNA polymerase III, chi subunit, HolC, putative K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RC1_0601 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rce03440]
D RC1_1303 recJ; single-stranded-DNA-specific exonuclease RecJ, putative K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RC1_1055 ssb; single-strand DNA binding protein, putative K03111 ssb; single-strand DNA-binding protein
D RC1_3064 recF; DNA replication and repair protein RecF, putative K03629 recF; DNA replication and repair protein RecF
D RC1_1482 recO; DNA repair protein RecO, putative K03584 recO; DNA repair protein RecO (recombination protein O)
D RC1_2304 recR; recombination protein RecR, putative K06187 recR; recombination protein RecR
D RC1_0899 recA; RecA protein K03553 recA; recombination protein RecA
D RC1_2483 polA; DNA polymerase I, putative K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RC1_1806 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RC1_1805 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RC1_1807 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RC1_1265 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RC1_1210 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RC1_3063 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RC1_2306 dnaX; DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RC1_2553 holA; DNA polymerase III, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RC1_1168 holB; ATPase i K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RC1_2803 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0992 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_1567 holC; DNA polymerase III, chi subunit, HolC, putative K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RC1_2252 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rce02010]
D RC1_3864 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RC1_3865 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RC1_3866 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RC1_3867 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RC1_2219 modA; molybdate-binding periplasmic protein, putative K02020 modA; molybdate transport system substrate-binding protein
D RC1_2218 modB; molybdenum transport system permease protein modB K02018 modB; molybdate transport system permease protein
D RC1_2216 modC; molybdenum import ATP-binding protein modC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RC1_1460 potF; putrescine-binding periplasmic protein PotF K11073 potF; putrescine transport system substrate-binding protein
D RC1_1457 potI; putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D RC1_1458 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D RC1_1459 potG; putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RC1_3732 malK; maltose K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RC1_3734 sugar ABC transporter, periplasmic sugar-binding protein, putative K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RC1_3730 malF; maltose transport system permease protein malF, putative K10237 thuF; trehalose/maltose transport system permease protein
D RC1_3731 malG; maltose transport system permease protein malG, putative K10238 thuG; trehalose/maltose transport system permease protein
D RC1_2053 toluene tolerance transporter, putative K07323 mlaC; phospholipid transport system substrate-binding protein
D RC1_0924 ABC transporter substrate binding protein, putative K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RC1_1441 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RC1_1443 ABC transporter, permease protein, putative K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RC1_1579 ABC transporter permease protein, putative K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RC1_1442 metN; D-methionine transport ATP-binding protein MetN K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RC1_1580 mkl; ABC transporter, ATP-binding protein, putative K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RC1_0248 basic membrane protein, putative K07335 bmpA; basic membrane protein A and related proteins
D RC1_0250 sugar ABC transporter, permease protein, putative K23535 nupB; general nucleoside transport system permease protein
D RC1_0251 sugar ABC transporter, permease protein, putative K23536 nupC; general nucleoside transport system permease protein
D RC1_0249 sugar ABC transporter, ATP-binding protein, putative K23537 nupA; general nucleoside transport system ATP-binding protein
D RC1_3262 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein PstS, putative K02040 pstS; phosphate transport system substrate-binding protein
D RC1_3263 pstC; phosphate ABC transporter, permease protein PstC, putative K02037 pstC; phosphate transport system permease protein
D RC1_3264 pstA; phosphate ABC transporter, permease protein PstA, putative K02038 pstA; phosphate transport system permease protein
D RC1_3265 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RC1_2707 hisJ; histidine-binding periplasmic protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D RC1_2708 artI; arginine-binding periplasmic protein 1 K10018 occT; octopine/nopaline transport system substrate-binding protein
D RC1_2710 amino acid ABC transporter, permease protein K10019 occM; octopine/nopaline transport system permease protein
D RC1_2709 amino acid ABC transporter, permease protein K10020 occQ; octopine/nopaline transport system permease protein
D RC1_2999 ABC transporter, putative K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D RC1_3123 aapJ; general L-amino acid-binding periplasmic protein AapJ K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RC1_3124 aapQ; general L-amino acid transport system permease protein AapQ K09970 aapQ; general L-amino acid transport system permease protein
D RC1_3125 aapM; general L-amino acid transport system permease protein AapM K09971 aapM; general L-amino acid transport system permease protein
D RC1_3126 aapP; general L-amino acid transport ATP-binding protein AapP K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RC1_1050 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RC1_1049 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RC1_1831 livH; high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RC1_1832 livM; high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RC1_1833 livG; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RC1_1834 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RC1_3352 NLPA lipoprotein, putative K02073 metQ; D-methionine transport system substrate-binding protein
D RC1_3350 binding-protein-dependent transport systems inner membrane component, putative K02072 metI; D-methionine transport system permease protein
D RC1_3351 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RC1_2211 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2212 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2773 bacterial extracellular solute-binding protein, family 5, putative K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2213 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2214 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2215 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_3364 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D RC1_3365 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D RC1_3366 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D RC1_3368 oppF; oligopeptide transport ATP-binding protein Op PF K10823 oppF; oligopeptide transport system ATP-binding protein
D RC1_3161 znuA; high-affinity zinc uptake system protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D RC1_3159 znuB; high-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D RC1_3160 znuC; high-affinity zinc uptake system ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RC1_2459 troA; periplasmic zinc-binding protein TroA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RC1_2461 troC; zinc transport system membrane protein TroC K11708 troC; manganese/zinc/iron transport system permease protein
D RC1_2462 troD; zinc transport system membrane protein TroD K11709 troD; manganese/zinc/iron transport system permease protein
D RC1_2460 troB; zinc transport system ATP-binding protein TroB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RC1_1960 bioY; BioY family protein K03523 bioY; biotin transport system substrate-specific component
D RC1_0819 ABC transporter, permease protein, putative K09690 wzm; homopolymeric O-antigen transport system permease protein
D RC1_0820 ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RC1_1215 lipoprotein releasing system, transmembrane protein, LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D RC1_1214 lolD; lipoprotein-releasing system ATP-binding proteinLolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RC1_3016 ccmD; cytochrome c-type biogenesis protein CcmD K02196 ccmD; heme exporter protein D
D RC1_3015 ccmC; cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D RC1_3012 ccmB; cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D RC1_3011 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RC1_1565 predicted permease YjgP K07091 lptF; lipopolysaccharide export system permease protein
D RC1_0756 predicted permease YjgP K07091 lptF; lipopolysaccharide export system permease protein
D RC1_1564 predicted permease YjgP K11720 lptG; lipopolysaccharide export system permease protein
D RC1_0757 predicted permease YjgP K11720 lptG; lipopolysaccharide export system permease protein
D RC1_3202 ABC transporter, ATP-binding protein, putative K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RC1_3909 nosY; nitrous oxide reductase, NosY K19341 nosY; Cu-processing system permease protein
D RC1_3910 nosF; copper ABC transporter, ATPase, NosF K19340 nosF; Cu-processing system ATP-binding protein
D RC1_4098 cell division protein, putative K09811 ftsX; cell division transport system permease protein
D RC1_3189 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RC1_1066 msbA; lipid A export ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RC1_2728 cvaB; colicin V secretion K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RC1_2894 ABC transporter, ATP-binding protein, putative K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RC1_0357 prtD; proteases secretion ATP-binding protein PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RC1_4039 cydC; transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RC1_2439 macB; macrolide-specific ABC-type efflux carrier K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:rce02060]
D RC1_2871 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RC1_2870 ptsH; phosphocarrier proteinhPr, putative K02784 ptsH; phosphocarrier protein HPr
D RC1_2869 PTS system fructose, IIA component, putative K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RC1_2644 ptsI; phosphoenolpyruvate-protein phosphotransferase, putative K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RC1_3205 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN, putative K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rce03070]
D RC1_1160 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RC1_1042 secD; protein-export membrane protein SecD, putative K03072 secD; preprotein translocase subunit SecD
D RC1_1012 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D RC1_0995 secF; protein-export membrane protein SecF, putative K03074 secF; preprotein translocase subunit SecF
D RC1_0695 secE; Preprotein translocase SecE subunit, putative K03073 secE; preprotein translocase subunit SecE
D RC1_0113 secG; preprotein translocase, SecG subunit, putative K03075 secG; preprotein translocase subunit SecG
D RC1_0731 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RC1_1041 yajC; preprotein translocase subunit YajC, putative K03210 yajC; preprotein translocase subunit YajC
D RC1_2283 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RC1_2667 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RC1_2195 ftsY; cell division ABC transporter, periplasmic substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RC1_2589 secB; protein-export chaperone SecB, putative K03071 secB; preprotein translocase subunit SecB
D RC1_2204 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RC1_1011 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RC1_1031 conserved domain protein K03116 tatA; sec-independent protein translocase protein TatA
D RC1_0677 conserved domain protein K03116 tatA; sec-independent protein translocase protein TatA
D RC1_1032 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RC1_1033 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rce02020]
D RC1_3261 phoR; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RC1_3267 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RC1_2391 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_0246 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_0290 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_0026 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_4042 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RC1_3262 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein PstS, putative K02040 pstS; phosphate transport system substrate-binding protein
D RC1_1894 sensor histidine kinase, putative K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RC1_1893 ompR; transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RC1_2146 response regulator receiver domain protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RC1_1980 degP; periplasmic serine protease, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RC1_2156 degP; periplasmic serine protease, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RC1_0205 flaB; flagellin protein FlaB (LafA), putative K02406 fliC; flagellin
D RC1_3763 lafA; flagellar protein Laf1 (LafA or FlaB) K02406 fliC; flagellin
D RC1_0214 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1009 MotA K02556 motA; chemotaxis protein MotA
D RC1_0792 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_2695 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_0433 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RC1_0432 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RC1_0436 kdpA; potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RC1_0435 kdpB; potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RC1_0434 kdpC; potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RC1_1780 torR; TorCAD operon transcriptional regulatory protein TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D RC1_3958 integral membrane protein, putative K07793 tctA; putative tricarboxylic transport membrane protein
D RC1_3959 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D RC1_3957 exported protein, putative K07795 tctC; putative tricarboxylic transport membrane protein
D RC1_2704 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RC1_0993 yycF; transcriptional regulatory protein YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D RC1_3057 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RC1_0298 conserved hypothetical membrane protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D RC1_2826 chvG; sensor protein ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RC1_0501 sensor histidine kinase, putative K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RC1_2825 chvI; transcriptional regulatory protein ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RC1_0500 chvl; transcriptional regulatory protein ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RC1_2612 vanX; D-alanyl-D-alanine dipeptidase VanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RC1_0333 fepA; ferric enterobactin receptor, putative K19611 fepA; ferric enterobactin receptor
D RC1_3930 citE; citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RC1_1407 narL; nitrate/nitrite response regulator protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RC1_0848 transcriptional regulator, LuxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RC1_1406 narP; nitrate/nitrite response regulator protein narP,putative K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RC1_0157 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D RC1_0158 fimbrial usher protein, putative K07347 fimD; outer membrane usher protein
D RC1_2592 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RC1_1257 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D RC1_0128 ntrB; Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RC1_0129 ntrC; Nitrogen assimilation regulatory protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RC1_1258 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1465 glutamine synthetase, putative K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1466 puuA; gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_0130 ntrY; Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RC1_0131 ntrX; Nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RC1_3691 nifA; Mo/Fe nitrogenase specific transcriptional regulator (Fis family) K02584 nifA; Nif-specific regulatory protein
D RC1_3720 atoE; short chain fatty acid transporter, putative K02106 atoE; short-chain fatty acids transporter
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3203 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RC1_0340 cheR2; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_1754 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_2130 cheR3; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_3878 chemotaxis protein methyltransferase, putative K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RC1_0872 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_1179 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0344 mcp2; methyl-accepting chemotaxis protein Mcp K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0383 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0477 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0540 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0295 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0327 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0897 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0898 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_1836 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_2174 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_2261 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_4059 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_4093 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3067 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3024 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3863 aer; aerotaxis sensor receptor Aer K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3888 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RC1_3890 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RC1_0343 cheW2; chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_1757 cheW; purine-binding chemotaxis protein Chew, putative K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_2132 cheW3a; cheW3a K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_2129 cheW3b; cheW3b K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_1758 cheAY; chemotaxis protein CheA (C terminus homologous to cheY) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0337 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_2126 cheA3; Histidine Sensor Kinase CheA3 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0955 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0339 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0353 cheY; chemotaxis protein CheY, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1756 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0350 response regulator receiver domain protein REC K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1424 cheYIII; chemotaxis protein cheYIII, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1755 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_0342 cheB2; chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_2125 cheB3; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_3224 ppr; bacteriophytochrome Ppr (contains PYP domain) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RC1_1532 response regulator With diguanylate cyclase (GGDEF) domain, putative K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RC1_3349 sensor histidine kinase, putative K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D RC1_1533 divK; cell division response regulator protein DivK K11443 divK; two-component system, cell cycle response regulator DivK
D RC1_0896 cckA; cell cycle histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RC1_4057 cckA; cell cycle histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RC1_1759 conserved hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D RC1_1752 ctrA; cell cycle transcriptional regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RC1_0209 ctrA; cell cycle transcriptional regulator (CheY-like receiver domain) CtrA, putative K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RC1_0355 fixJ; transcriptional regulatory protein FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D RC1_0791 flbD; transcriptional regulatory protein FlbD (LafK) K10943 flrC; two-component system, response regulator FlrC
D RC1_3788 transcriptional regulator, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_0399 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_1270 transcriptional regulator, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_2541 regB; sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RC1_2542 regA; photosynthetic apparatus regulatory protein RegA K15012 regA; two-component system, response regulator RegA
D RC1_2100 pufM; photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit
D RC1_2099 pufL; photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RC1_2098 pufA; Light-Harvesting I Complex, alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RC1_2097 pufB; Light-Harvesting I Complex, beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D RC1_2109 puhA; H subunit of photosynthetic reaction center complex K13991 puhA; photosynthetic reaction center H subunit
D RC1_2445 rieske iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RC1_3422 petA; ubiquinol-Cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RC1_3424 petC; cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RC1_3423 petB; cytochrome b K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D RC1_3981 cytochrome c2 iso-1 K08738 CYC; cytochrome c
D RC1_2102 c552; cytochrome c2 iso-2 (c552) K08738 CYC; cytochrome c
D RC1_3404 cycM; cytochrome c K08738 CYC; cytochrome c
D RC1_1280 ccoN; cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RC1_1279 ccoO; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RC1_1278 ccoQ; cytochrome c oxidase, Cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RC1_1277 ccoP; cytochrome c oxidase, Cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RC1_4036 cytochrome D ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RC1_0415 cioA; ubiquinol oxidase subunit I, cyanide insensitive K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RC1_0287 quinol oxidase subunit I, putative K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RC1_4035 cydB; cytochrome D ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RC1_0416 cioB; ubiquinol oxidase subunit II, cyanide insensitive K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RC1_0285 quinol oxidase, subunit II, putative K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RC1_4034 ybgT; cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D RC1_1160 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RC1_1410 polysaccharide biosynthesis K01991 wza; polysaccharide biosynthesis/export protein
D RC1_2900 low molecular weight phosphotyrosine protein phosphatase, putative K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RC1_1933 sigma factor regulatory protein, FecR K07165 fecR; transmembrane sensor
D RC1_3811 sigma factor regulatory protein, FecR K07165 fecR; transmembrane sensor
D RC1_3844 sigma factor regulatory protein, FecR K07165 fecR; transmembrane sensor
D RC1_4124 sigma factor regulatory protein, FecR K07165 fecR; transmembrane sensor
D RC1_3342 Complexhybrid Signal Transduction Protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RC1_1172 sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RC1_3033 sensor protein torS, putative K20976 hptB; histidine phosphotransfer protein HptB
D RC1_2159 histidine-containing phosphotransfer (HPt) domain protein K20976 hptB; histidine phosphotransfer protein HptB
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rce04148]
D RC1_3009 ldc; lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RC1_1717 lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RC1_1357 ldc; lysine K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RC1_2445 rieske iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RC1_3422 petA; ubiquinol-Cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rce02024]
D RC1_0135 hfq; protein hfq K03666 hfq; host factor-I protein
D RC1_3848 nfrA; host factor protein K03666 hfq; host factor-I protein
D RC1_0109 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RC1_0105 trpG; anthranilate synthase component II, putative K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RC1_0952 aroF; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RC1_0432 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RC1_1050 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RC1_1049 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RC1_1831 livH; high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RC1_1832 livM; high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RC1_1833 livG; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RC1_1834 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RC1_3673 lcfA; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2696 AMP-dependent synthetase and ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_3535 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2964 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_3788 transcriptional regulator, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_0399 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_1270 transcriptional regulator, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_0590 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RC1_2933 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RC1_1340 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RC1_3750 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D RC1_2211 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2212 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2773 bacterial extracellular solute-binding protein, family 5, putative K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2213 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2214 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2215 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_3364 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D RC1_3365 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D RC1_3366 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D RC1_3368 oppF; oligopeptide transport ATP-binding protein Op PF K10823 oppF; oligopeptide transport system ATP-binding protein
D RC1_0962 bacterial extracellular solute-binding protein, family 5, putative K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RC1_2283 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RC1_1012 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D RC1_0695 secE; Preprotein translocase SecE subunit, putative K03073 secE; preprotein translocase subunit SecE
D RC1_0113 secG; preprotein translocase, SecG subunit, putative K03075 secG; preprotein translocase subunit SecG
D RC1_0731 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RC1_1041 yajC; preprotein translocase subunit YajC, putative K03210 yajC; preprotein translocase subunit YajC
D RC1_2667 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RC1_2195 ftsY; cell division ABC transporter, periplasmic substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RC1_2589 secB; protein-export chaperone SecB, putative K03071 secB; preprotein translocase subunit SecB
D RC1_2204 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rce02030]
D RC1_0872 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_1179 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0344 mcp2; methyl-accepting chemotaxis protein Mcp K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0383 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0477 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0540 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0295 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0327 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0897 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0898 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_1836 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_2174 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_2261 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_4059 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_4093 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3067 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3024 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3863 aer; aerotaxis sensor receptor Aer K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3888 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RC1_3890 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RC1_1758 cheAY; chemotaxis protein CheA (C terminus homologous to cheY) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0337 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_2126 cheA3; Histidine Sensor Kinase CheA3 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0343 cheW2; chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_1757 cheW; purine-binding chemotaxis protein Chew, putative K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_2132 cheW3a; cheW3a K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_2129 cheW3b; cheW3b K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_0955 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0339 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0353 cheY; chemotaxis protein CheY, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1756 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0350 response regulator receiver domain protein REC K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1424 cheYIII; chemotaxis protein cheYIII, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0882 cheZ; chemotaxis phosphatase protein CheZ, putative K03414 cheZ; chemotaxis protein CheZ
D RC1_1755 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_0342 cheB2; chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_2125 cheB3; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_3878 chemotaxis protein methyltransferase, putative K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RC1_0340 cheR2; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_1754 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_2130 cheR3; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_0672 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RC1_0179 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RC1_0879 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RC1_0186 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RC1_0793 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_3209 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_1271 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_0182 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_0214 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1009 MotA K02556 motA; chemotaxis protein MotA
D RC1_0792 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_2695 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1361 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0884 motB; chemotaxis MotB protein, putative K02557 motB; chemotaxis protein MotB
D RC1_1826 motB; chemotaxis MotB protein, putative K02557 motB; chemotaxis protein MotB
D RC1_1008 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0213 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rce02040]
D RC1_0195 fliE; flagellar hook-basal body complex protein FliE, putative K02408 fliE; flagellar hook-basal body complex protein FliE
D RC1_0892 fliE; flagellar hook-basal body complex protein FliE, putative K02408 fliE; flagellar hook-basal body complex protein FliE
D RC1_0184 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RC1_0795 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RC1_0672 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RC1_0179 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RC1_0794 fliH; flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D RC1_0183 fliH; flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D RC1_0198 fliI; H+-transporting two-sector ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RC1_1751 fliI; H+-transporting two-sector ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RC1_1750 conserved hypothetical protein K02413 fliJ; flagellar protein FliJ
D RC1_0224 fliK; Flagellar hook-length control protein FliK, putative K02414 fliK; flagellar hook-length control protein FliK
D RC1_1397 fliK; flagellar hook-length control protein FliK, putative K02414 fliK; flagellar hook-length control protein FliK
D RC1_0878 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RC1_1334 fliL; flagellar basal body-associated protein FliL, putative K02415 fliL; flagellar protein FliL
D RC1_0185 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RC1_0221 hypothetical protein K02415 fliL; flagellar protein FliL
D RC1_0879 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RC1_0186 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RC1_0793 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_3209 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_1271 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_0182 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_0887 fliO; flagellar assembly protein FliO, putative K02418 fliO; flagellar protein FliO/FliZ
D RC1_0886 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RC1_0181 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RC1_0194 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RC1_0893 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RC1_0190 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RC1_0894 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RC1_0790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RC1_0191 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RC1_0189 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RC1_0895 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RC1_1389 flgA; flagella basal body P-ring formation protein FlgA, putative K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RC1_0219 flgA; flagella basal body P-ring formation protein FlgA, putative K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RC1_0197 flgB; flagellar basal-body rod protein FlgB, putative K02387 flgB; flagellar basal-body rod protein FlgB
D RC1_0890 flgB; flagellar basal-body rod protein FlgB, putative K02387 flgB; flagellar basal-body rod protein FlgB
D RC1_3041 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RC1_0196 flgC; flagellar basal-body rod protein FlgC, putative K02388 flgC; flagellar basal-body rod protein FlgC
D RC1_0891 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RC1_0223 flgD; basal-body rod modification protein FlgD, putative K02389 flgD; flagellar basal-body rod modification protein FlgD
D RC1_1398 flgD; basal-body rod modification protein FlgD, putative K02389 flgD; flagellar basal-body rod modification protein FlgD
D RC1_0212 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RC1_3758 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RC1_1387 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RC1_0217 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RC1_1388 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RC1_0218 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RC1_1390 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RC1_0220 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RC1_1393 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RC1_0208 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RC1_1394 cheL; chemotactic signal-response protein CheL, putative K02395 flgJ; peptidoglycan hydrolase FlgJ
D RC1_0207 cheL; chemotactic signal-response protein CheL, putative K02395 flgJ; peptidoglycan hydrolase FlgJ
D RC1_0211 flgK; flagellar hook-associated protein 1 FlgK, putative K02396 flgK; flagellar hook-associated protein 1
D RC1_3761 flgK; flagellar hook-associated protein FlgK, putative K02396 flgK; flagellar hook-associated protein 1
D RC1_0210 flgL; flagellar hook-associated protein 3 FlgL, putative K02397 flgL; flagellar hook-associated protein 3 FlgL
D RC1_3762 flgL; flagellar hook-associated protein 3 FlgL, putative K02397 flgL; flagellar hook-associated protein 3 FlgL
D RC1_0205 flaB; flagellin protein FlaB (LafA), putative K02406 fliC; flagellin
D RC1_3763 lafA; flagellar protein Laf1 (LafA or FlaB) K02406 fliC; flagellin
D RC1_0214 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1009 MotA K02556 motA; chemotaxis protein MotA
D RC1_0792 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_2695 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1361 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0884 motB; chemotaxis MotB protein, putative K02557 motB; chemotaxis protein MotB
D RC1_1826 motB; chemotaxis MotB protein, putative K02557 motB; chemotaxis protein MotB
D RC1_1008 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0213 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_2006 rpoD; DNA-directed RNA polymerase, sigma subunit RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RC1_3203 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RC1_0791 flbD; transcriptional regulatory protein FlbD (LafK) K10943 flrC; two-component system, response regulator FlrC
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RC1_0117 eno; phosphopyruvate hydratase, putative K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rce04980]
D RC1_0324 ATP:cob(1)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RC1_4111 ATP:cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RC1_3097 argK; Lao K07588 MMAA; GTPase [EC:3.6.5.-]
D RC1_3119 bhbA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rce01501]
D RC1_0950 ampG3; ampG protein, putative K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RC1_1027 beta-glucosidase-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RC1_2211 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2212 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2773 bacterial extracellular solute-binding protein, family 5, putative K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2213 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2214 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2215 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_3364 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D RC1_3365 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D RC1_3366 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D RC1_3368 oppF; oligopeptide transport ATP-binding protein Op PF K10823 oppF; oligopeptide transport system ATP-binding protein
D RC1_0305 ttgR; HTH-type transcriptional regulator TtgR K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D RC1_3899 acrE; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3245 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_0280 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3244 AcrB K18138 acrB; multidrug efflux pump
D RC1_3898 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D RC1_0281 AcrB K18138 acrB; multidrug efflux pump
D RC1_3886 acrF; acriflavine resistance protein F K18138 acrB; multidrug efflux pump
D RC1_3750 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D RC1_3746 adeS; two component sensor histidine kinase AdeS, putative K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RC1_3747 adeR; DNA-binding response regulator AdeR, putative K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RC1_3748 HlyD family secretion protein K18145 adeA; membrane fusion protein, multidrug efflux system
D RC1_3749 acrB; acriflavine resistance protein B K18146 adeB; multidrug efflux pump
D RC1_1160 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RC1_1608 mrcA; penicillin-binding protein 1A (PBP-1a) (PBP1a) MrcA, putative K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RC1_2700 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RC1_1965 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RC1_0619 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RC1_2760 bla; beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:rce01502]
D RC1_2612 vanX; D-alanyl-D-alanine dipeptidase VanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RC1_0609 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RC1_1578 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RC1_0617 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RC1_0616 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RC1_0613 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rce01503]
D RC1_3143 Alkaline Protease, putative K01406 prtC; serralysin [EC:3.4.24.40]
D RC1_4001 Alkaline protease, putative K01406 prtC; serralysin [EC:3.4.24.40]
D RC1_3388 Serralysin precursor, putative K01406 prtC; serralysin [EC:3.4.24.40]
D RC1_3460 amiB; N-acetylmuramoyl-L-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RC1_1609 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RC1_1980 degP; periplasmic serine protease, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RC1_2156 degP; periplasmic serine protease, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RC1_3899 acrE; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3245 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_0280 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3244 AcrB K18138 acrB; multidrug efflux pump
D RC1_3898 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D RC1_0281 AcrB K18138 acrB; multidrug efflux pump
D RC1_3886 acrF; acriflavine resistance protein F K18138 acrB; multidrug efflux pump
D RC1_1160 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RC1_1196 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RC1_0298 conserved hypothetical membrane protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rce01000]
C 01001 Protein kinases [BR:rce01001]
D RC1_2380 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RC1_0704 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RC1_4006 exoP; succinoglycan biosynthesis transport protein ExoP K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RC1_2533 exoP; succinoglycan biosynthesis transport protein ExoP, putative K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RC1_3261 phoR; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RC1_1894 sensor histidine kinase, putative K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RC1_0433 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RC1_2826 chvG; sensor protein ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RC1_0501 sensor histidine kinase, putative K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RC1_3746 adeS; two component sensor histidine kinase AdeS, putative K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RC1_0128 ntrB; Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RC1_0130 ntrY; Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RC1_2124 cstS3; cstS3 K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RC1_1758 cheAY; chemotaxis protein CheA (C terminus homologous to cheY) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0337 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_2126 cheA3; Histidine Sensor Kinase CheA3 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_3224 ppr; bacteriophytochrome Ppr (contains PYP domain) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RC1_3349 sensor histidine kinase, putative K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D RC1_0896 cckA; cell cycle histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RC1_4057 cckA; cell cycle histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RC1_2541 regB; sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RC1_3342 Complexhybrid Signal Transduction Protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RC1_1172 sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rce01009]
D RC1_2714 ahcY; adenosylhomocysteinase, putative K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RC1_2425 molecular chaperone,hSP90 family, putative K04079 HSP90A; molecular chaperone HtpG
D RC1_1979 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rce01002]
D RC1_3586 lspA; Lipoprotein signal peptidase II, LspA, putative K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RC1_2620 pcp; pyrrolidone-carboxylate peptidase Pcp K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RC1_3972 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RC1_2165 Peptidase C26 K07010 K07010; putative glutamine amidotransferase
D RC1_2788 Peptidase C26 K07010 K07010; putative glutamine amidotransferase
D RC1_2728 cvaB; colicin V secretion K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RC1_1585 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RC1_3193 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RC1_3347 glmS; glucosamine--fructose-6-phosphate aminotransferase [isomerizing], putative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RC1_4027 asnB; asparagine synthase (glutamine-hydrolyzing), putative K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RC1_3781 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RC1_3544 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RC1_2891 intracellular protease, PFpI family protein, putative K05520 yhbO; deglycase [EC:3.5.1.124]
D RC1_2865 pfpL; peptidase C56, PFpI, putative K05520 yhbO; deglycase [EC:3.5.1.124]
D RC1_2426 peptidoglycan binding domain protein, putative K21470 ycbB; L,D-transpeptidase YcbB
D RC1_1696 membrane protease, putative K07052 K07052; CAAX protease family protein
D RC1_1953 pepN; aminopeptidase N, PepN, putative K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RC1_2186 dcp; peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RC1_2034 pepF; oligoendopeptidase Pe PF, putative K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RC1_2145 oligoendopeptidase, pe PF K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RC1_3143 Alkaline Protease, putative K01406 prtC; serralysin [EC:3.4.24.40]
D RC1_4001 Alkaline protease, putative K01406 prtC; serralysin [EC:3.4.24.40]
D RC1_3388 Serralysin precursor, putative K01406 prtC; serralysin [EC:3.4.24.40]
D RC1_1854 metallopeptidase PepO, peptidase, M13 family, putative K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RC1_2612 vanX; D-alanyl-D-alanine dipeptidase VanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RC1_3588 peptidase, M16 family, putative K07263 pqqL; zinc protease [EC:3.4.24.-]
D RC1_3589 peptidase M16, putative K07263 pqqL; zinc protease [EC:3.4.24.-]
D RC1_0639 peptidase, M16 family, putative K07263 pqqL; zinc protease [EC:3.4.24.-]
D RC1_2330 pepB; leucyl aminopeptidase PepB, putative K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RC1_1566 pepA; leucyl aminopeptidase PepA, putative K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RC1_3716 renal dipeptidase superfamily, putative K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RC1_2293 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RC1_3390 map; methionine aminopeptidase, type I, Map putative K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RC1_2247 map; methionine aminopeptidase, type I, Map putative K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RC1_2033 Xaa-Pro aminopeptidase, putative K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RC1_1796 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RC1_2347 htpX; Protease HtpX-like protein, putative K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RC1_1201 membrane-associated zinc metalloprotease, putative K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RC1_3818 conserved hypothetical protein K16922 yydH; putative peptide zinc metalloprotease protein
D RC1_3929 protease, putative K04775 ydgD; protease YdgD [EC:3.4.21.-]
D RC1_1980 degP; periplasmic serine protease, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RC1_2156 degP; periplasmic serine protease, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RC1_3493 ppcE; prolyl oligopeptidase family protein PpcE, putative K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RC1_1181 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RC1_2756 protease II, ptrB, putative K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D RC1_1167 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RC1_1453 clpP; ClpP protease, putative K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RC1_1248 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP, putative K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RC1_3348 conserved hypothetical protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RC1_1245 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RC1_1189 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RC1_1495 lepB; signal peptidase I, LepB, putative K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RC1_2236 pip; proline iminopeptidase Pip, putative K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RC1_0937 epoxide hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D RC1_0555 ctpA; carboxy-terminal processing protease CtpA K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RC1_1530 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RC1_2771 acyII; penicillin acylase II, putative K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RC1_1360 acyII; penicillin acylase II, putative K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RC1_0570 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D RC1_2632 rhomboid family membrane protein K07059 K07059; rhomboid family protein
D RC1_3293 hslV; ATP-dependent protease HslV, putative K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RC1_1422 aspG; L-asparaginase, putative K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RC1_2162 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RC1_3131 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RC1_0934 protease, putative K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D RC1_0935 peptidase, U32 family, putative K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D RC1_3619 pmbA; Protein pmbA (Protein tldE), putative K03592 pmbA; PmbA protein
D RC1_3629 tldD; protein tldD K03568 tldD; TldD protein
D RC1_3662 conserved hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D RC1_1982 hflC; HflC protein, putative K04087 hflC; modulator of FtsH protease HflC
D RC1_1983 hflK; HflK protein, putative K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rce01003]
D RC1_2529 glycosyl transferase, family 2, putative K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356]
D RC1_4026 pimA; phosphatidylinositol alpha-mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D RC1_4017 N-acetylglucosaminyltransferase, putative K00737 MGAT3; beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.144]
D RC1_2746 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RC1_3308 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase, putative K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RC1_1608 mrcA; penicillin-binding protein 1A (PBP-1a) (PBP1a) MrcA, putative K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RC1_2700 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RC1_0657 glycosyl transferase, group 2 family protein K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-]
D RC1_2535 gumK; glucuronosyltransferase, putative K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264]
D RC1_2571 glycosyl transferase, putative K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
D RC1_3515 otsA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rce01005]
D RC1_1196 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RC1_1194 lpxB; lipid-A-disaccharide synthase, putative K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RC1_0605 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RC1_1198 lpxD; UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase, putative K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RC1_1195 conserved hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RC1_3613 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RC1_3612 htrB; lipid A biosynthesis lauroyl acyltransferase, putative K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RC1_3614 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RC1_0115 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RC1_3405 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase, putative K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RC1_3797 sugar isomerase, KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RC1_0829 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RC1_0817 D,D-heptose 1,7-bisphosphate phosphatase 1, putative K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RC1_2528 hldE; bifunctional protein hldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RC1_1901 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RC1_0152 glycosyl transferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RC1_2495 glycosyl transferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rce01011]
D RC1_1653 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RC1_0610 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, putative K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RC1_0612 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RC1_0615 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RC1_0618 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RC1_0609 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RC1_1578 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RC1_3325 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RC1_0616 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RC1_0613 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RC1_3196 uppP; undecaprenyl-diphosphatase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RC1_3550 PAP2 superfamily K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RC1_2624 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RC1_1608 mrcA; penicillin-binding protein 1A (PBP-1a) (PBP1a) MrcA, putative K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RC1_2700 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RC1_1965 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RC1_0619 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RC1_1167 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RC1_3308 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase, putative K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RC1_2426 peptidoglycan binding domain protein, putative K21470 ycbB; L,D-transpeptidase YcbB
D RC1_2612 vanX; D-alanyl-D-alanine dipeptidase VanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RC1_1507 lytic murein transglycosylase family protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RC1_3003 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RC1_1165 mltB; membrane-bound lytic murein transglycosylase B, putative K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RC1_1568 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RC1_1166 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RC1_4087 rlpA; rare lipoprotein A, putative K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RC1_3460 amiB; N-acetylmuramoyl-L-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RC1_1609 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rce01004]
D RC1_1572 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RC1_1327 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RC1_1569 fabF; beta-ketoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RC1_1571 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RC1_1197 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RC1_0577 fabI; Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RC1_0650 enoyl-acyl carrier protein reductase, putative K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RC1_2645 fabK; enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RC1_3088 GDSL-like Lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RC1_1370 acyl-CoA thioester hydrolase, putative K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D RC1_1736 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RC1_2336 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_3030 acetyl-CoA synthetase, putative K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RC1_1843 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RC1_3673 lcfA; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2696 AMP-dependent synthetase and ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_3535 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2964 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_0745 acyl-CoA synthetase, putative K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RC1_3527 acyl-CoA synthetase, putative K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RC1_3521 long-chain-fatty-acid--CoA ligase, putative K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RC1_1328 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RC1_1526 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RC1_4095 acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rce01008]
D RC1_1268 bcsA; chalcone synthase, putative K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D RC1_1269 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K16168 bpsB; methyltransferase
D RC1_0431 aspartate racemase, putative K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:rce01006]
D RC1_0564 ispA; geranylgeranyl pyrophosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RC1_2091 crtE; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RC1_1676 ispB; octaprenyl-diphosphate synthase, putative K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RC1_1204 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RC1_2086 crtB; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RC1_1977 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RC1_3625 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RC1_3632 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RC1_2078 bchG; geranylgeranyl bacteriochlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rce01007]
D RC1_3305 lysS; lysyl-tRNA synthetase LysS K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RC1_0975 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_1191 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_4115 gltX; glutamyl-tRNA synthetase GltX K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RC1_1622 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RC1_2623 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RC1_0976 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RC1_1025 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RC1_1169 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RC1_3585 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RC1_1162 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RC1_2551 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RC1_1540 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RC1_3575 hisS; histidyl-tRNA synthetasehisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RC1_1669 glyQ; glycyl-tRNA synthetase, alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RC1_1668 glyS; glycyl-tRNA synthetase, beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RC1_1034 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RC1_1216 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RC1_2819 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RC1_0900 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RC1_2315 pheS; phenylalanyl-tRNA synthetase, alpha subunit PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RC1_2318 pheT; phenylalanyl-tRNA synthetase, beta subunit PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RC1_1880 aatA; aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RC1_1306 aminotransferase, class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D RC1_3661 aminotransferase, classes I and II K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RC1_4085 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RC1_2103 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RC1_0996 hemA; 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RC1_0748 bioF; 8-amino-7-oxononanoate synthase, putative K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RC1_1469 omega-amino acid:pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RC1_0557 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RC1_2476 argD; acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RC1_1461 aminotransferase, class III K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RC1_0133 D-alanine aminotransferase, putative K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RC1_0573 ilvE; branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_1891 ilvE; Branched-chain-amino-acid aminotransferase, putative K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RC1_1788 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rce00194]
D RC1_0362 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RC1_2240 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RC1_0361 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RC1_2241 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RC1_0369 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RC1_2242 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RC1_0368 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RC1_2243 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RC1_2244 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RC1_0367 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RC1_3512 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RC1_3513 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RC1_0366 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RC1_3511 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RC1_0365 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RC1_3510 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RC1_0363 F0F1-ATPase subunit, putative (H+transporting ATP synthase protein1) K02116 atpI; ATP synthase protein I
D RC1_3509 atpI; probable ATP synthase assembly protein K02116 atpI; ATP synthase protein I
D RC1_1056 conserved hypothetical protein K05383 cpeT; CpeT protein
D RC1_2099 pufL; photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RC1_2100 pufM; photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit
D RC1_2109 puhA; H subunit of photosynthetic reaction center complex K13991 puhA; photosynthetic reaction center H subunit
D RC1_2101 pufC; photosynthetic reaction center cytochrome c subunit K13992 pufC; photosynthetic reaction center cytochrome c subunit
D RC1_2098 pufA; Light-Harvesting I Complex, alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RC1_2097 pufB; Light-Harvesting I Complex, beta subunit K08927 pufB; light-harvesting complex 1 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rce03000]
D RC1_2969 ada; ADA regulatory protein, putative K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RC1_3437 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RC1_1186 transcriptional regulator, LysR family protein K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RC1_3549 oxyR; hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RC1_0438 oxyR; hydrogen peroxide-inducible genes activator protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RC1_4060 cbbR1; RuBisCO operon transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RC1_0238 cbbR2; RuBisCO operon transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RC1_3233 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RC1_0999 transcriptional regulator, GntR family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RC1_0305 ttgR; HTH-type transcriptional regulator TtgR K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D RC1_1782 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RC1_3344 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RC1_0443 transcriptional regulator, AsnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RC1_0760 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RC1_0559 lrp; leucine-responsive regulatory protein K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D RC1_2779 bkdR; Bkd operon transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RC1_0832 ohrR; organic hydroperoxide resistance transcriptionalregulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RC1_4044 transcriptional regulator, MarR family protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RC1_0660 transcriptional regulator, MarR family protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RC1_0173 expG; exopolysaccharide II synthesis transcriptional activator ExpG K25883 expG; MarR family transcriptional regulator, exopolysaccharide II synthesis transcriptional activator
D RC1_0106 hmrR; HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RC1_1014 transcriptional regulator, MerR family protein K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D RC1_2024 transcriptional regulator, MerR family protein K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D RC1_2117 aerR; coenzyme B12-binding aerobic repressor K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RC1_2558 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RC1_0590 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RC1_2944 transcriptional regulator, Fur family protein K09826 irr; Fur family transcriptional regulator, iron response regulator
D RC1_3568 mhpR; transcriptional regulator MhpR protein K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D RC1_3788 transcriptional regulator, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_0399 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_1270 transcriptional regulator, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RC1_2984 anr; Transcriptional activator protein Anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RC1_3851 transcriptional regulator, Crp K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RC1_3977 nnrR; nitrite and nitric oxide reductase regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D RC1_1618 rrf2 family protein (putative transcriptional regulator) K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RC1_2994 transcriptional regulator, ArsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RC1_0560 nolR; nodulation protein NolR K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D RC1_2566 hlyU; transcriptional activator HlyU K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D RC1_3808 conserved hypothetical protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D RC1_2685 conserved hypothetical protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D RC1_1746 hexR; HTH-type transcriptional regulator hexR, putative K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RC1_1226 birA; biotin-[acetyl-CoA-carboxylase] ligase, birA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RC1_1087 ner; phage DNA-binding protein Ner K07724 ner; Ner family transcriptional regulator
D RC1_2841 DNA-binding protein, putative K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D RC1_3691 nifA; Mo/Fe nitrogenase specific transcriptional regulator (Fis family) K02584 nifA; Nif-specific regulatory protein
D RC1_2217 modE; transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D RC1_1708 conserved hypothetical protein K07726 K07726; putative transcriptional regulator
D RC1_2253 tyrR; transcriptional regulatory protein TyrR K07726 K07726; putative transcriptional regulator
D RC1_2258 DNA-binding protein, putative K07726 K07726; putative transcriptional regulator
D RC1_1781 putA; proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RC1_3913 nosR; nitrous oxide reductase regulatory protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D RC1_3080 bolA; BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RC1_2813 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RC1_3743 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RC1_2223 CarD-like transcriptional regulator protein, putative K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RC1_2957 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RC1_1613 tena K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RC1_0012 conserved hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RC1_2513 pspF; Psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D RC1_2517 pspC; phage shock protein C K03973 pspC; phage shock protein C
D RC1_3651 pspC; phage shock protein C K03973 pspC; phage shock protein C
D RC1_2518 hypothetical protein K03973 pspC; phage shock protein C
D RC1_3645 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D RC1_1391 dksA; RNA polymerase-binding protein DksA (DnaK suppressor protein), putative K06204 dksA; RNA polymerase-binding transcription factor
D RC1_1341 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D RC1_0622 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rce03021]
D RC1_0735 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RC1_0701 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RC1_0702 rpoC; DNA-directed RNA polymerase, beta' subunit, putative K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RC1_1500 rpoZ; DNA-directed RNA polymerase, omega subunit, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RC1_2006 rpoD; DNA-directed RNA polymerase, sigma subunit RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RC1_1638 RNA polymerase sigma-70 factor, ECF family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RC1_2001 RNA polymerase sigma-70 factor; ECF family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RC1_0261 RNA polymerase sigma-70 factor; ECF family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RC1_0862 RNA polymerase sigma-70 factor, ECF family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RC1_2980 RNA polymerase sigma-70 factor, ECF family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RC1_2225 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D RC1_1724 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D RC1_2169 RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D RC1_3203 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RC1_2910 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RC1_1336 nusB; transcription antitermination protein NusB, putative K03625 nusB; transcription antitermination protein NusB
D RC1_0696 nusG; Transcription antitermination protein NusG, putative K02601 nusG; transcription termination/antitermination protein NusG
D RC1_0348 rsbS; antagonist protein RsbS K17762 rsbS; rsbT antagonist protein RsbS
D RC1_0349 rsbR; sigma-B modulator protein K17763 rsbR; rsbT co-antagonist protein RsbR
D RC1_1391 dksA; RNA polymerase-binding protein DksA (DnaK suppressor protein), putative K06204 dksA; RNA polymerase-binding transcription factor
D RC1_2015 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RC1_2598 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D RC1_2794 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rce03019]
D RC1_1611 rne; ribonuclease, Rne K08300 rne; ribonuclease E [EC:3.1.26.12]
D RC1_1645 ribonuclease, Rne K08301 rng; ribonuclease G [EC:3.1.26.-]
D RC1_1494 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RC1_1224 metallo-beta-lactamase, putative K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RC1_3142 metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RC1_1529 rnr; ribonuclease R, putative K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RC1_2432 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RC1_0117 eno; phosphopyruvate hydratase, putative K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RC1_2919 pnp; polyribonucleotide nucleotidyltransferase, putative K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RC1_2794 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RC1_2858 dnaK; chaperone protein DnaK, putative K04043 dnaK; molecular chaperone DnaK
D RC1_2595 groL; chaperonin GroL, putative K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RC1_0135 hfq; protein hfq K03666 hfq; host factor-I protein
D RC1_3848 nfrA; host factor protein K03666 hfq; host factor-I protein
D RC1_1544 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RC1_3419 polyA polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RC1_3408 nudix family hydrolase, putative K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RC1_2349 rraA; regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D RC1_2868 P-loop ATPase family protein K06958 rapZ; RNase adapter protein RapZ
D RC1_1438 hrpB; ATP-dependent helicase protein, putative K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rce03011]
D RC1_2487 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RC1_1208 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RC1_0717 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RC1_0980 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RC1_0728 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RC1_1573 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RC1_0707 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RC1_0725 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RC1_1313 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RC1_0710 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RC1_0734 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RC1_0706 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RC1_0733 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RC1_0724 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RC1_2917 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RC1_2207 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RC1_0720 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RC1_1574 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RC1_0715 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RC1_3055 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RC1_2070 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RC1_0698 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RC1_0714 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RC1_0711 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RC1_0712 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RC1_0723 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RC1_0726 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RC1_1575 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RC1_0699 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RC1_0697 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RC1_0700 rplL; ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RC1_1314 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RC1_0721 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RC1_0730 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RC1_0718 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RC1_0736 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RC1_0727 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RC1_2210 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RC1_2313 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RC1_0448 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RC1_0716 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RC1_0713 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RC1_0722 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RC1_0447 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RC1_3140 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RC1_0719 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RC1_0729 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RC1_1838 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RC1_1329 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RC1_1531 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RC1_2281 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RC1_2312 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RC1_2153 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RC1_1907 ribosomal 5S rRNA E-loop binding protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RC1_0373 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RC1_3703 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RC1_2626 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RC1_0374 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3707 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_2630 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3538 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3541 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_0372 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_3704 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_2627 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rce03009]
D RC1_1494 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RC1_1493 era; GTP-binding protein Era K03595 era; GTPase
D RC1_0446 GTP-binding protein GTP1 K03979 obgE; GTPase [EC:3.6.5.-]
D RC1_1391 dksA; RNA polymerase-binding protein DksA (DnaK suppressor protein), putative K06204 dksA; RNA polymerase-binding transcription factor
D RC1_2910 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RC1_1336 nusB; transcription antitermination protein NusB, putative K03625 nusB; transcription antitermination protein NusB
D RC1_0696 nusG; Transcription antitermination protein NusG, putative K02601 nusG; transcription termination/antitermination protein NusG
D RC1_1561 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RC1_2348 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RC1_0156 tRNA and rRNA cytosine-C5-methylase, putative K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RC1_3598 methyltransferase, putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RC1_3627 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RC1_2811 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RC1_0621 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RC1_3036 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RC1_0569 tlyA; hemolysin A, putative K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RC1_0689 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RC1_0154 rrmJ; ribosomal RNA large subunit methyltransferase J,RrmJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RC1_1916 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RC1_2986 SAM-dependent methyltransferase, putative K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RC1_0852 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RC1_1704 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D RC1_2562 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RC1_2750 RNA (Uracil-5-)-methyltransferase, putative K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RC1_2582 RNA pseudouridine synthase, putative K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RC1_0460 RNA pseudouridine synthase, putative K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RC1_3597 RNA pseudouridine synthase, putative K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RC1_0422 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RC1_1725 ribosomal large subunit pseudouridine synthase D, putative K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RC1_3230 rluE; ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D RC1_3228 RNA methyltransferase, TrmH family K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D RC1_2610 rimI; ribosomal-protein-alanine acetyltransferase, putative K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RC1_3644 rimJ; ribosomal-protein-alanine acetyltransferase, putative K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RC1_2208 rimM; 16S rRNA processing protein RimM, putative K02860 rimM; 16S rRNA processing protein RimM
D RC1_0705 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RC1_2032 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RC1_2723 modification methylase,hemK family K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RC1_1611 rne; ribonuclease, Rne K08300 rne; ribonuclease E [EC:3.1.26.12]
D RC1_1645 ribonuclease, Rne K08301 rng; ribonuclease G [EC:3.1.26.-]
D RC1_1518 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RC1_1401 GTP-binding protein, putative K03977 engA; GTPase
D RC1_0136 hflX; GTP-binding protein hflX, putative K03665 hflX; GTPase
D RC1_1629 Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RC1_1499 guanosine polyphosphate phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RC1_2915 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RC1_2909 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D RC1_1915 iojap-related protein, putative K09710 ybeB; ribosome-associated protein
D RC1_2976 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D RC1_3204 yfiA; ribosomal subunit interface protein, putative K05808 hpf; ribosome hibernation promoting factor
D RC1_3426 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rce03016]
D RC1_0763 rnz; ribonuclease Z, putative K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RC1_0975 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_1191 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_1216 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RC1_3585 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RC1_2551 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RC1_1169 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RC1_1025 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RC1_1540 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RC1_0900 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RC1_2819 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RC1_1034 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RC1_0976 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RC1_1162 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RC1_3575 hisS; histidyl-tRNA synthetasehisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RC1_2315 pheS; phenylalanyl-tRNA synthetase, alpha subunit PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RC1_2318 pheT; phenylalanyl-tRNA synthetase, beta subunit PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RC1_1622 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RC1_2623 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RC1_1150 alaS; alanyl-tRNA synthetase AlaS K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D RC1_3301 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RC1_2971 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RC1_2295 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RC1_2916 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RC1_1616 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_0478 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_1629 Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RC1_1977 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RC1_2809 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RC1_2810 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RC1_1602 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RC1_2282 rnpA; ribonuclease P protein component, putative K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RC1_2960 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RC1_3199 ribonuclease D, putative K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RC1_1541 rnd; ribonuclease D, putative K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RC1_3091 2'-5' RNA ligase, putative K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RC1_2061 ABC transporter, ATP-binding protein, putative K06020 ettA; energy-dependent translational throttle protein EttA
D RC1_3305 lysS; lysyl-tRNA synthetase LysS K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RC1_1669 glyQ; glycyl-tRNA synthetase, alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RC1_1668 glyS; glycyl-tRNA synthetase, beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RC1_4115 gltX; glutamyl-tRNA synthetase GltX K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RC1_3594 cytidine and deoxycytidylate deaminase, putative K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RC1_0127 tRNA-dihydrouridine synthase B, putative K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RC1_2978 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RC1_2196 conserved hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RC1_0772 conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D RC1_0978 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RC1_1047 gid; glucose inhibited division protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RC1_2209 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RC1_3228 RNA methyltransferase, TrmH family K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D RC1_3421 RNA methyltransferase, TrmH family, putative K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RC1_2582 RNA pseudouridine synthase, putative K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RC1_0460 RNA pseudouridine synthase, putative K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RC1_0938 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RC1_0561 conserved domain protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RC1_0487 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D RC1_0480 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D RC1_1664 aminomethyltransferase, putative K06980 ygfZ; tRNA-modifying protein YgfZ
D RC1_2561 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RC1_1797 tilS; tRNA(Ile)-lysidine synthetase, TilS, putative K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RC1_2611 glycoprotease (M22) metalloprotease, putative K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RC1_2362 gcp; O-sialoglycoprotein endopeptidase, putative K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RC1_3154 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RC1_1529 rnr; ribonuclease R, putative K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RC1_2919 pnp; polyribonucleotide nucleotidyltransferase, putative K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rce03012]
D RC1_2912 infB; translation initiation factor 2 InfB K02519 infB; translation initiation factor IF-2
D RC1_2820 infC; translation initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3
D RC1_1555 ABC transporter, ATP-binding protein, putative K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RC1_1207 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RC1_0693 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RC1_0709 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RC1_1873 efp; translation elongation factor efp K02355 fusA; elongation factor G
D RC1_0708 fusA; translation elongation factor G FusA K02355 fusA; elongation factor G
D RC1_3537 fusA; translation elongation factor G FusA K02355 fusA; elongation factor G
D RC1_2637 prfA; peptide chain release factor 1 PrfA K02835 prfA; peptide chain release factor 1
D RC1_1205 frr; ribosome recycling factor frr K02838 frr; ribosome recycling factor
D RC1_2636 modification methylase,hemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RC1_1908 pth; peptidyl-tRNA hydrolase pth K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RC1_1647 infA; translation initiation factor IF-1 InfA K02518 infA; translation initiation factor IF-1
D RC1_1830 efp; translation elongation factor P efp K02356 efp; elongation factor P
D RC1_1823 tRNA synthetases class II (D, K and N) subfamily, putative K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D RC1_1606 prfB; peptide chain release factor 2 PrfB K02836 prfB; peptide chain release factor 2
D RC1_0869 prfC; peptide chain release factor 3 PrfC K02837 prfC; peptide chain release factor 3
D RC1_1710 peptidyl-tRNA hydrolase domain, putative K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rce03110]
D RC1_1691 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RC1_2633 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RC1_1247 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RC1_3292 hslU; heat shock protein HslVU, ATPase subunit HslU, putative K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RC1_2425 molecular chaperone,hSP90 family, putative K04079 HSP90A; molecular chaperone HtpG
D RC1_2858 dnaK; chaperone protein DnaK, putative K04043 dnaK; molecular chaperone DnaK
D RC1_2556 dnaK; Heat shock protein DnaK, putative K04046 yegD; hypothetical chaperone protein
D RC1_2595 groL; chaperonin GroL, putative K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RC1_2859 dnaJ; chaperone protein DnaJ, putative K03686 dnaJ; molecular chaperone DnaJ
D RC1_0626 djlA; DnaJ-like protein DjlA, putative K05801 djlA; DnaJ like chaperone protein
D RC1_1615 DnaJ family, molecular chaperone, putative K04082 hscB; molecular chaperone HscB
D RC1_2474 Hsp33 protein, putative K04083 hslO; molecular chaperone Hsp33
D RC1_2956 grpE; co-chaperone GrpE, putative K03687 GRPE; molecular chaperone GrpE
D RC1_1840 smallheat shock proteinhsp20 K04080 ibpA; molecular chaperone IbpA
D RC1_2419 heat shock protein, putative K04762 hslR; ribosome-associated heat shock protein Hsp15
D RC1_2594 groS; chaperonin GroS, putative K04078 groES; chaperonin GroES
D RC1_1980 degP; periplasmic serine protease, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RC1_2156 degP; periplasmic serine protease, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RC1_1796 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RC1_0365 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RC1_3510 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RC1_0157 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D RC1_2589 secB; protein-export chaperone SecB, putative K03071 secB; preprotein translocase subunit SecB
D RC1_3508 conserved hypothetical protein K09796 pccA; periplasmic copper chaperone A
D RC1_0110 peptidyl-prolyl cis-trans isomerse, putative K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RC1_0963 fkpA; fkbp-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RC1_2666 peptidyl-prolyl cis-trans isomerase family protein, putative K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RC1_1563 peptidyl-prolyl cis-trans isomerase family protein, putative K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RC1_2836 trx; thioredoxin K03671 TXN; thioredoxin
D RC1_3565 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D RC1_2498 thioredoxin, putative K05838 ybbN; putative thioredoxin
D RC1_2660 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D RC1_0986 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D RC1_3021 ccmG; cytochrome c biogenesis protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rce04131]
D RC1_1554 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RC1_1818 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RC1_3965 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RC1_2135 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RC1_2401 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RC1_2425 molecular chaperone,hSP90 family, putative K04079 HSP90A; molecular chaperone HtpG
D RC1_3273 Major Facilitator Superfamily (MSF) transporter, putative K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rce04121]
C 03051 Proteasome [BR:rce03051]
D RC1_2425 molecular chaperone,hSP90 family, putative K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rce03032]
D RC1_3647 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RC1_2393 hupB; DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D RC1_1244 hupA; DNA-binding protein HupA K03530 hupB; DNA-binding protein HU-beta
D RC1_1326 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D RC1_2486 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D RC1_3057 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RC1_1577 dnaB; replicative DNA helicase, putative K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RC1_2007 dnaG; DNA primase, catalytic core, putative K02316 dnaG; DNA primase [EC:2.7.7.101]
D RC1_1055 ssb; single-strand DNA binding protein, putative K03111 ssb; single-strand DNA-binding protein
D RC1_1210 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RC1_3063 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RC1_1567 holC; DNA polymerase III, chi subunit, HolC, putative K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RC1_2553 holA; DNA polymerase III, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RC1_1168 holB; ATPase i K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RC1_2803 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0992 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_2306 dnaX; DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RC1_3174 rnhB; ribonucleasehII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RC1_2483 polA; DNA polymerase I, putative K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RC1_0601 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RC1_1059 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RC1_3065 gyrB; DNA gyrase, B subunit, putative K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RC1_1481 parC; DNA topoisomerase IV, A subunit, putative K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RC1_1371 parE; DNA topoisomerase IV, B subunit, putative K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RC1_1528 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rce03036]
D RC1_1494 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RC1_2393 hupB; DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D RC1_1244 hupA; DNA-binding protein HupA K03530 hupB; DNA-binding protein HU-beta
D RC1_1326 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D RC1_2486 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D RC1_3563 conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D RC1_3057 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RC1_1876 dps; Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RC1_1875 dps; Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RC1_0135 hfq; protein hfq K03666 hfq; host factor-I protein
D RC1_3848 nfrA; host factor protein K03666 hfq; host factor-I protein
D RC1_1782 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RC1_3344 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RC1_0443 transcriptional regulator, AsnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RC1_0760 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RC1_0507 smc; SMC family protein K03529 smc; chromosome segregation protein
D RC1_1029 scpA; segregation and condensation protein A, putative K05896 scpA; segregation and condensation protein A
D RC1_1030 scpB; segregation and condensation protein B, putative K06024 scpB; segregation and condensation protein B
D RC1_0607 ftsA; cell division protein FtsA, putative K03590 ftsA; cell division protein FtsA
D RC1_3189 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RC1_0619 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RC1_2785 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RC1_0620 tonB; protein TonB, putative K03586 ftsL; cell division protein FtsL
D RC1_0608 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RC1_0614 ftsW; cell division protein FtsW, putative K03588 ftsW; cell division protein FtsW
D RC1_4098 cell division protein, putative K09811 ftsX; cell division transport system permease protein
D RC1_1811 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D RC1_3967 ATPase, AFG1 family K06916 zapE; cell division protein ZapE
D RC1_3460 amiB; N-acetylmuramoyl-L-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RC1_1609 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RC1_3899 acrE; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3245 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_0280 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3503 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RC1_3502 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RC1_3501 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RC1_1968 mreB; rod shape-determining protein MreB (actin-like ATPase domain) K03569 mreB; rod shape-determining protein MreB and related proteins
D RC1_1967 mreC; rod shape-determining protein MreC, putative K03570 mreC; rod shape-determining protein MreC
D RC1_1966 mreD; rod shape-determining protein MreD, putative K03571 mreD; rod shape-determining protein MreD
D RC1_1964 rodA; rod shape-determining protein RodA (FtsW, Bacterial cell division membrane protein) K05837 rodA; rod shape determining protein RodA
D RC1_2812 ATPase involved in chromosome partitioning, putative K03496 parA; chromosome partitioning protein
D RC1_1628 ATPase involved in chromosome partitioning, putative K03496 parA; chromosome partitioning protein
D RC1_2413 ATPase involved in chromosome partitioning, putative K03496 parA; chromosome partitioning protein
D RC1_0168 cobyrinic acid a,c-diamide synthase, putative K03496 parA; chromosome partitioning protein
D RC1_3742 repA; replication protein A, putative K03496 parA; chromosome partitioning protein
D RC1_2813 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RC1_3743 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RC1_1481 parC; DNA topoisomerase IV, A subunit, putative K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RC1_1371 parE; DNA topoisomerase IV, B subunit, putative K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RC1_2810 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RC1_2811 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RC1_1047 gid; glucose inhibited division protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RC1_2257 xerC; tyrosine recombinase XerC, putative K03733 xerC; integrase/recombinase XerC
D RC1_2680 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RC1_1984 mrp protein, putative K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RC1_2383 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RC1_2284 GTP-binding protein, putative K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rce03400]
D RC1_2026 deoxyribodipyrimidine photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RC1_2382 conserved hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RC1_0510 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RC1_2770 nth; endonuclease III, putative K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RC1_2663 hydrolase, NUDIX family, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RC1_3950 hydrolase, NUDIX family, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RC1_3043 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RC1_2969 ada; ADA regulatory protein, putative K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RC1_0592 deoxyribodipyrimidine photolyase-like protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RC1_2852 alkB; alkylated DNA repair protein, putative K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D RC1_3955 Uracil DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RC1_1503 uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RC1_3183 uracil-DNA glycosylase, family 4 protein, putative K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RC1_1221 DNA-3-methyladenine glycosylase I, putative K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RC1_3052 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RC1_1022 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RC1_2792 endonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RC1_2698 nfi; endonuclease V, putative K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D RC1_1303 recJ; single-stranded-DNA-specific exonuclease RecJ, putative K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RC1_0601 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RC1_2483 polA; DNA polymerase I, putative K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RC1_1053 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D RC1_1881 uvrB; excinuclease ABC, B subunit, putative K03702 uvrB; excinuclease ABC subunit B
D RC1_1885 uvrC; excinuclease ABC, C subunit, putative K03703 uvrC; excinuclease ABC subunit C
D RC1_2036 UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RC1_0701 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RC1_0702 rpoC; DNA-directed RNA polymerase, beta' subunit, putative K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RC1_0735 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RC1_1500 rpoZ; DNA-directed RNA polymerase, omega subunit, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RC1_1262 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RC1_2903 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RC1_3601 mutL; DNA mismatch repair protein MutL, putative K03572 mutL; DNA mismatch repair protein MutL
D RC1_3609 xseA; exodeoxyribonuclease VII, large subunit, putative K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RC1_0563 xseB; exodeoxyribonuclease VII, small subunit, putative K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RC1_1210 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RC1_3063 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RC1_1567 holC; DNA polymerase III, chi subunit, HolC, putative K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RC1_2553 holA; DNA polymerase III, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RC1_1168 holB; ATPase i K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RC1_2803 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_0992 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RC1_2306 dnaX; DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RC1_1055 ssb; single-strand DNA binding protein, putative K03111 ssb; single-strand DNA-binding protein
D RC1_0899 recA; RecA protein K03553 recA; recombination protein RecA
D RC1_1806 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RC1_1805 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RC1_1807 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RC1_2252 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RC1_1583 radA; DNA repair protein RadA, putative K04485 radA; DNA repair protein RadA/Sms
D RC1_3064 recF; DNA replication and repair protein RecF, putative K03629 recF; DNA replication and repair protein RecF
D RC1_1265 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RC1_1482 recO; DNA repair protein RecO, putative K03584 recO; DNA repair protein RecO (recombination protein O)
D RC1_2304 recR; recombination protein RecR, putative K06187 recR; recombination protein RecR
D RC1_0603 recN; DNA repair protein RecN, putative K03631 recN; DNA repair protein RecN (Recombination protein N)
D RC1_2604 helicase, UvrD K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RC1_2601 conserved hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RC1_3488 cas1; CRISPR-associated protein Cas1, putative K15342 cas1; CRISP-associated protein Cas1
D RC1_3334 cas1; CRISPR-associated protein Cas1, putative K15342 cas1; CRISP-associated protein Cas1
D RC1_1059 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RC1_3065 gyrB; DNA gyrase, B subunit, putative K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RC1_1528 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RC1_2393 hupB; DNA-binding protein HupB K03530 hupB; DNA-binding protein HU-beta
D RC1_1244 hupA; DNA-binding protein HupA K03530 hupB; DNA-binding protein HU-beta
D RC1_1326 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D RC1_2486 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D RC1_2432 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RC1_1534 ImpB K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RC1_1189 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RC1_2848 conserved hypothetical protein K03565 recX; regulatory protein
D RC1_3311 DNA helicase, putative K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RC1_0641 ATP-dependent RNA helicase, DEAD K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RC1_1156 hydrolase, MutT K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D RC1_0921 nrdJ; B12-dependent ribonucleoside diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_4094 ribonucleoside-diphosphate reductase, putative K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_3477 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RC1_3496 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rce03029]
D RC1_2912 infB; translation initiation factor 2 InfB K02519 infB; translation initiation factor IF-2
D RC1_2820 infC; translation initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3
D RC1_1207 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RC1_0693 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RC1_0709 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RC1_1873 efp; translation elongation factor efp K02355 fusA; elongation factor G
D RC1_0708 fusA; translation elongation factor G FusA K02355 fusA; elongation factor G
D RC1_3537 fusA; translation elongation factor G FusA K02355 fusA; elongation factor G
D RC1_1331 ubiquinol-cytochrome C chaperone, putative K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D RC1_2123 rhrA; RNA helicase RhrA K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D RC1_2420 mgpS; ATP-dependent helicase MgpS K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D RC1_1493 era; GTP-binding protein Era K03595 era; GTPase
D RC1_1622 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RC1_2551 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RC1_1540 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RC1_1025 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RC1_0161 glutamyl-tRNA(Gln) amidotransferase subunit A, putative K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RC1_1516 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RC1_0029 gatB; aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B, GatB putative K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RC1_1517 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RC1_1055 ssb; single-strand DNA binding protein, putative K03111 ssb; single-strand DNA-binding protein
D RC1_1200 outer membrane protein, putative K07277 SAM50; outer membrane protein insertion porin family
D RC1_2858 dnaK; chaperone protein DnaK, putative K04043 dnaK; molecular chaperone DnaK
D RC1_2956 grpE; co-chaperone GrpE, putative K03687 GRPE; molecular chaperone GrpE
D RC1_2595 groL; chaperonin GroL, putative K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RC1_2594 groS; chaperonin GroS, putative K04078 groES; chaperonin GroES
D RC1_2859 dnaJ; chaperone protein DnaJ, putative K03686 dnaJ; molecular chaperone DnaJ
D RC1_1616 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_0478 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_1615 DnaJ family, molecular chaperone, putative K04082 hscB; molecular chaperone HscB
D RC1_0986 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D RC1_1046 squalene K18163 NDUFAF6; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
D RC1_1903 conserved hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D RC1_1984 mrp protein, putative K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RC1_3632 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RC1_3634 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RC1_2704 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RC1_2283 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RC1_3637 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D RC1_3507 Sco1 K23755 SCO2; protein SCO2
D RC1_2425 molecular chaperone,hSP90 family, putative K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rce02000]
D RC1_1066 msbA; lipid A export ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RC1_2728 cvaB; colicin V secretion K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RC1_2894 ABC transporter, ATP-binding protein, putative K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RC1_1837 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RC1_0024 ABC transporter, ATP-binding protein, putative K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RC1_3789 ABC transporter ATP-binding protein, putative K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RC1_0357 prtD; proteases secretion ATP-binding protein PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RC1_4039 cydC; transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RC1_2439 macB; macrolide-specific ABC-type efflux carrier K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D RC1_0625 hfaC; holdfast attachment protein C K15738 uup; ABC transport system ATP-binding/permease protein
D RC1_3864 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RC1_3865 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RC1_3866 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RC1_3867 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RC1_2219 modA; molybdate-binding periplasmic protein, putative K02020 modA; molybdate transport system substrate-binding protein
D RC1_2218 modB; molybdenum transport system permease protein modB K02018 modB; molybdate transport system permease protein
D RC1_2216 modC; molybdenum import ATP-binding protein modC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RC1_1460 potF; putrescine-binding periplasmic protein PotF K11073 potF; putrescine transport system substrate-binding protein
D RC1_1457 potI; putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D RC1_1458 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D RC1_1459 potG; putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RC1_1447 ABC transporter, periplasmic substrate-binding protein, putative K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RC1_1444 binding-protein-dependent transport systems inner membrane component, putative K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RC1_1446 ABC transporter, ATP-binding protein, putative K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RC1_3732 malK; maltose K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RC1_3734 sugar ABC transporter, periplasmic sugar-binding protein, putative K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RC1_3730 malF; maltose transport system permease protein malF, putative K10237 thuF; trehalose/maltose transport system permease protein
D RC1_3731 malG; maltose transport system permease protein malG, putative K10238 thuG; trehalose/maltose transport system permease protein
D RC1_0248 basic membrane protein, putative K07335 bmpA; basic membrane protein A and related proteins
D RC1_0250 sugar ABC transporter, permease protein, putative K23535 nupB; general nucleoside transport system permease protein
D RC1_0251 sugar ABC transporter, permease protein, putative K23536 nupC; general nucleoside transport system permease protein
D RC1_0249 sugar ABC transporter, ATP-binding protein, putative K23537 nupA; general nucleoside transport system ATP-binding protein
D RC1_0924 ABC transporter substrate binding protein, putative K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RC1_1441 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RC1_1443 ABC transporter, permease protein, putative K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RC1_1579 ABC transporter permease protein, putative K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RC1_1442 metN; D-methionine transport ATP-binding protein MetN K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RC1_1580 mkl; ABC transporter, ATP-binding protein, putative K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RC1_1440 lipoprotein, putative K18480 linN; cholesterol transport system auxiliary component
D RC1_2053 toluene tolerance transporter, putative K07323 mlaC; phospholipid transport system substrate-binding protein
D RC1_3262 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein PstS, putative K02040 pstS; phosphate transport system substrate-binding protein
D RC1_3263 pstC; phosphate ABC transporter, permease protein PstC, putative K02037 pstC; phosphate transport system permease protein
D RC1_3264 pstA; phosphate ABC transporter, permease protein PstA, putative K02038 pstA; phosphate transport system permease protein
D RC1_3265 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RC1_2707 hisJ; histidine-binding periplasmic protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D RC1_2708 artI; arginine-binding periplasmic protein 1 K10018 occT; octopine/nopaline transport system substrate-binding protein
D RC1_2710 amino acid ABC transporter, permease protein K10019 occM; octopine/nopaline transport system permease protein
D RC1_2709 amino acid ABC transporter, permease protein K10020 occQ; octopine/nopaline transport system permease protein
D RC1_2999 ABC transporter, putative K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D RC1_3123 aapJ; general L-amino acid-binding periplasmic protein AapJ K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RC1_3124 aapQ; general L-amino acid transport system permease protein AapQ K09970 aapQ; general L-amino acid transport system permease protein
D RC1_3125 aapM; general L-amino acid transport system permease protein AapM K09971 aapM; general L-amino acid transport system permease protein
D RC1_3126 aapP; general L-amino acid transport ATP-binding protein AapP K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RC1_1050 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RC1_1049 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RC1_1831 livH; high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RC1_1832 livM; high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RC1_1833 livG; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RC1_1834 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RC1_3352 NLPA lipoprotein, putative K02073 metQ; D-methionine transport system substrate-binding protein
D RC1_3350 binding-protein-dependent transport systems inner membrane component, putative K02072 metI; D-methionine transport system permease protein
D RC1_3351 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RC1_4075 ABC transporter, periplasmic substrate-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RC1_3966 amino acid ABC transporter, periplasmic amino acid-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RC1_3208 ABC transporter, periplasmic substrate-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RC1_4076 ABC transporter, periplasmic substrate-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RC1_2211 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2212 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2773 bacterial extracellular solute-binding protein, family 5, putative K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2213 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2214 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_2215 oppA; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RC1_3364 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D RC1_3365 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D RC1_3366 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D RC1_3368 oppF; oligopeptide transport ATP-binding protein Op PF K10823 oppF; oligopeptide transport system ATP-binding protein
D RC1_0962 bacterial extracellular solute-binding protein, family 5, putative K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RC1_3859 hmuT; hemin-binding periplasmic protein HmuT precursor, putative K25132 hmuT; heme transport system substrate-binding protein
D RC1_3860 hmuU; hemin transport system permease protein HmuU, putative K25133 hmuU; heme transport system permease protein
D RC1_3861 hmuV; hemin transport system ATP-binding protein HmuV, putative K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D RC1_3739 iron(III) ABC transporter, periplasmic iron-binding protein, putative K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RC1_0312 periplasmic binding protein, putative K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RC1_3871 periplasmic binding protein, putative K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RC1_0664 periplasmic binding protein, putative K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RC1_0663 hmuU; hemin transport system permease protein, HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D RC1_3740 FecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D RC1_0313 hmuU; hemin transport system permease protein, HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D RC1_3872 hemin ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D RC1_0662 fecE; iron(III) dicitrate transport ATP-binding protein fecE K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RC1_3873 ABC transporter, ATP-binding protein, putative K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RC1_3741 iron ABC transporter, ATP-binding protein, putative K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RC1_0315 fecE; iron(III) dicitrate transport ATP-binding protein FecE K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RC1_3161 znuA; high-affinity zinc uptake system protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D RC1_3159 znuB; high-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D RC1_3160 znuC; high-affinity zinc uptake system ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RC1_2459 troA; periplasmic zinc-binding protein TroA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RC1_2461 troC; zinc transport system membrane protein TroC K11708 troC; manganese/zinc/iron transport system permease protein
D RC1_2462 troD; zinc transport system membrane protein TroD K11709 troD; manganese/zinc/iron transport system permease protein
D RC1_2460 troB; zinc transport system ATP-binding protein TroB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RC1_1960 bioY; BioY family protein K03523 bioY; biotin transport system substrate-specific component
D RC1_0819 ABC transporter, permease protein, putative K09690 wzm; homopolymeric O-antigen transport system permease protein
D RC1_0820 ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RC1_1565 predicted permease YjgP K07091 lptF; lipopolysaccharide export system permease protein
D RC1_0756 predicted permease YjgP K07091 lptF; lipopolysaccharide export system permease protein
D RC1_1564 predicted permease YjgP K11720 lptG; lipopolysaccharide export system permease protein
D RC1_0757 predicted permease YjgP K11720 lptG; lipopolysaccharide export system permease protein
D RC1_3202 ABC transporter, ATP-binding protein, putative K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RC1_3909 nosY; nitrous oxide reductase, NosY K19341 nosY; Cu-processing system permease protein
D RC1_3910 nosF; copper ABC transporter, ATPase, NosF K19340 nosF; Cu-processing system ATP-binding protein
D RC1_1215 lipoprotein releasing system, transmembrane protein, LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D RC1_1214 lolD; lipoprotein-releasing system ATP-binding proteinLolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RC1_3016 ccmD; cytochrome c-type biogenesis protein CcmD K02196 ccmD; heme exporter protein D
D RC1_3015 ccmC; cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D RC1_3012 ccmB; cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D RC1_3011 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RC1_4098 cell division protein, putative K09811 ftsX; cell division transport system permease protein
D RC1_3189 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RC1_2539 ABC transporter permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_1813 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_1814 ABC transporter, permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_2850 Abc2a K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_2851 Abc2b K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_0302 yhhJ; inner membrane transport permease YhhJ, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_3728 ABC-2 type transporter, permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_1687 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_2058 ABC transporter, permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D RC1_2540 ABC transporter, ATP-binding protein, putative K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RC1_3838 ABC transporter, ATP binding protein, putative K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RC1_1815 ABC transporter, ATP-binding protein, putative K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RC1_3254 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RC1_2057 ABC transporter, ATP-binding protein, putative K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RC1_3086 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D RC1_2906 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D RC1_1640 macB; macrolide-specific ABC-type efflux carrier K02004 ABC.CD.P; putative ABC transport system permease protein
D RC1_3284 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D RC1_3285 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D RC1_2905 lolD; lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RC1_1641 ABC transporter, ATP-binding protein, putative K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RC1_3283 ABC transporter, ATP-binding protein, putative K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RC1_0492 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RC1_1058 norM; multidrug resistance protein NorM, putative K26939 norM; MATE family, multidrug efflux pump
D RC1_2079 bch2; photosynthetic complex assembly protein (possible Bch2, light harvesting pigment Major FacilitatorFamily protein Bch2), putative K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RC1_2110 lhaA; photosynthetic complex (LH1) assembly protein LhaA K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RC1_0950 ampG3; ampG protein, putative K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RC1_2952 drug resistance transporter, Bcr K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D RC1_1688 tetA; tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RC1_4051 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RC1_3273 Major Facilitator Superfamily (MSF) transporter, putative K06902 UMF1; MFS transporter, UMF1 family
D RC1_2871 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RC1_2644 ptsI; phosphoenolpyruvate-protein phosphotransferase, putative K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RC1_2870 ptsH; phosphocarrier proteinhPr, putative K02784 ptsH; phosphocarrier protein HPr
D RC1_2869 PTS system fructose, IIA component, putative K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RC1_3205 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN, putative K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RC1_0384 potassium channel protein, putative K10716 kch; voltage-gated potassium channel
D RC1_2839 cation channel family protein K08714 VGSC; voltage-gated sodium channel
D RC1_2743 amtB; ammonia transporter K03320 amt; ammonium transporter, Amt family
D RC1_3278 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_3194 glutathione S-transferase family protein, putative K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_2329 gst; glutathione S-transferase, putative K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_3430 glutathione S-transferase family protein, putative K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_2897 MAPEG family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_1877 glutathione S-transferase family protein, putative K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RC1_3171 Mechanosensitive ion channel protein, putative K22044 ybiO; moderate conductance mechanosensitive channel
D RC1_0404 mgtE; magnesium transporter, putative K06213 mgtE; magnesium transporter
D RC1_0214 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1009 MotA K02556 motA; chemotaxis protein MotA
D RC1_0792 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_2695 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1361 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0884 motB; chemotaxis MotB protein, putative K02557 motB; chemotaxis protein MotB
D RC1_1826 motB; chemotaxis MotB protein, putative K02557 motB; chemotaxis protein MotB
D RC1_1008 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0213 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_3833 exbB; biopolymer transport ExbB protein K03561 exbB; biopolymer transport protein ExbB
D RC1_0681 exbB; biopolymer transport ExbB protein K03561 exbB; biopolymer transport protein ExbB
D RC1_0800 MotA K03561 exbB; biopolymer transport protein ExbB
D RC1_0801 MotA K03561 exbB; biopolymer transport protein ExbB
D RC1_0682 exbD; biopolymer transport ExbD protein K03559 exbD; biopolymer transport protein ExbD
D RC1_0683 exbD1; biopolymer transport exbD1 protein, putative K03559 exbD; biopolymer transport protein ExbD
D RC1_0802 exbD2; biopolymer transport ExbD2 protein K03559 exbD; biopolymer transport protein ExbD
D RC1_3834 exbD; biopolymer transport ExbD protein K03559 exbD; biopolymer transport protein ExbD
D RC1_1803 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D RC1_1802 exbD; biopolymer transport ExbD protein K03560 tolR; biopolymer transport protein TolR
D RC1_3456 corA; magnesium and cobalt transport protein CorA, putative K03284 corA; magnesium transporter
D RC1_2877 corA; magnesium transport protein CorA K03284 corA; magnesium transporter
D RC1_0423 CrcB-like protein K06199 crcB; fluoride exporter
D RC1_2523 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RC1_2674 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RC1_2705 lamB; maltoporin K02024 lamB; maltoporin
D RC1_2923 outer membrane protein K16079 omp31; outer membrane immunogenic protein
D RC1_2924 outer membrane protein, putative K16079 omp31; outer membrane immunogenic protein
D RC1_3954 phosphate-selective porin O and P family protein K07221 oprO_P; phosphate-selective porin OprO and OprP
D RC1_3400 phosphate-selective porin O and P family protein K07221 oprO_P; phosphate-selective porin OprO and OprP
D RC1_0846 ompA; OmpA family protein (probable proton motor, MotY) K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RC1_0847 ompA; OmpA family protein (probable proton motor MotY) K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RC1_2482 outer membrane protein, putative K06076 fadL; long-chain fatty acid transport protein
D RC1_0158 fimbrial usher protein, putative K07347 fimD; outer membrane usher protein
D RC1_3440 outer membrane autotransporter barrel domain protein K12686 apeE; outer membrane lipase/esterase
D RC1_0333 fepA; ferric enterobactin receptor, putative K19611 fepA; ferric enterobactin receptor
D RC1_3870 TonB-dependent receptor, putative K16092 btuB; vitamin B12 transporter
D RC1_0665 btuB; vitamin B12 transporter BtuB K16092 btuB; vitamin B12 transporter
D RC1_1184 cirA; colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D RC1_2946 TonB-dependent receptor, putative K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D RC1_3856 TonB-dependent hemoglobin K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D RC1_3810 TonB dependent receptor, putative K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D RC1_0945 TonB-dependent siderophore receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3004 tonB; TonB-dependent siderophore receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_1174 TonB-dependent copper receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3920 TonB dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3938 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3332 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3215 fhuA; ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3892 fcuA; ferrichrome receptor FcuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3738 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0326 TonB dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0027 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0806 TonB dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3524 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3711 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0306 TonB dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3736 btuB; vitamin B12 transporter btuB precursor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_4041 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_3723 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0426 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0580 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0278 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0291 TonB dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_0403 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_1932 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_1863 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_2392 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RC1_1160 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RC1_3750 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D RC1_4004 polysaccharide biosynthesis K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D RC1_1410 polysaccharide biosynthesis K01991 wza; polysaccharide biosynthesis/export protein
D RC1_1200 outer membrane protein, putative K07277 SAM50; outer membrane protein insertion porin family
D RC1_1402 PQQ enzyme repeat family protein K17713 bamB; outer membrane protein assembly factor BamB
D RC1_0604 tetratricopeptide repeat family protein K05807 bamD; outer membrane protein assembly factor BamD
D RC1_3926 outer membrane protein, OMP85 family K07278 tamA; translocation and assembly module TamA
D RC1_3925 conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D RC1_3201 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D RC1_3200 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D RC1_1378 ostA; organic solvent tolerance protein OstA, putative K04744 lptD; LPS-assembly protein
D RC1_2552 conserved hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D RC1_2975 hemolysin containing CBS domain, putative K06189 corC; hemolysin (HlyC) family protein
D RC1_0858 lrgA; LrgA family K06518 cidA; holin-like protein
D RC1_3028 zitB; zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RC1_0585 cation efflux family protein K13283 fieF; ferrous-iron efflux pump FieF
D RC1_3244 AcrB K18138 acrB; multidrug efflux pump
D RC1_3898 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D RC1_0281 AcrB K18138 acrB; multidrug efflux pump
D RC1_3886 acrF; acriflavine resistance protein F K18138 acrB; multidrug efflux pump
D RC1_1430 AcrB K18989 vexF; multidrug efflux pump
D RC1_3749 acrB; acriflavine resistance protein B K18146 adeB; multidrug efflux pump
D RC1_3745 multidrug resistance protein, SMR family K03297 emrE; small multidrug resistance pump
D RC1_2954 sugE; multidrug resistance protein SugE, putative K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RC1_1211 eamA; amino acid metabolite efflux pump, probable K15268 eamA; O-acetylserine/cysteine efflux transporter
D RC1_0624 integral membrane protein, putative K15268 eamA; O-acetylserine/cysteine efflux transporter
D RC1_3291 conserved hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D RC1_3302 lldP; L-lactate permease, putative K03303 lutP; lactate permease
D RC1_3854 C4-dicarboxylate transporter K03304 tehA; tellurite resistance protein
D RC1_3663 Na+/Ca+ exchanger protein, putative K07301 yrbG; cation:H+ antiporter
D RC1_3220 sodium/solute symporter, putative K14393 actP; cation/acetate symporter
D RC1_2653 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D RC1_2235 sodium/hydrogen exchanger family protein K11105 cvrA; potassium/hydrogen antiporter
D RC1_2443 sodium/hydrogen exchanger family protein K03316 nhaP; Na+:H+ antiporter
D RC1_0502 nhaP; Na+/H+ antiporter NhaP, putative K03316 nhaP; Na+:H+ antiporter
D RC1_0382 kefB; glutathione-regulated potassium-efflux system protein KefB K03455 KEA1_2_3; K+:H+ antiporter
D RC1_2885 sodium/hydrogen exchanger family protein K26735 KEA4_5_6; K+:H+ antiporter
D RC1_2185 trk; trk system potassium uptake protein TrkH, putative K03498 trkH; trk/ktr system potassium uptake protein
D RC1_0132 trkA; K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D RC1_1220 xanthine K06901 pbuG; adenine/guanine/hypoxanthine permease
D RC1_2016 chrA; chromate ion transporter K07240 chrA; chromate transporter
D RC1_2996 acr3; arsenical-resistance protein, putative K03325 ACR3; arsenite transporter
D RC1_3664 mrpA; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D RC1_3665 mrpB; Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D RC1_3666 mrpC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RC1_3667 mrpD; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RC1_3668 mrpE; Na(+)/H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RC1_3669 mrpF; Na(+)/H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D RC1_3670 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RC1_2624 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RC1_1519 membrane transport protein, putative K13936 mdcF; malonate transporter and related proteins
D RC1_3958 integral membrane protein, putative K07793 tctA; putative tricarboxylic transport membrane protein
D RC1_3959 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D RC1_3957 exported protein, putative K07795 tctC; putative tricarboxylic transport membrane protein
D RC1_3141 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D RC1_3303 marC; MarC integral membrane family protein K05595 marC; multiple antibiotic resistance protein
D RC1_2503 marC; MarC integral membrane family protein K05595 marC; multiple antibiotic resistance protein
D RC1_0614 ftsW; cell division protein FtsW, putative K03588 ftsW; cell division protein FtsW
D RC1_2569 conserved hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D RC1_0661 protein TonB, putative K03832 tonB; periplasmic protein TonB
D RC1_0680 tonB; protein TonB K03832 tonB; periplasmic protein TonB
D RC1_0803 tonB; protein TonB K03832 tonB; periplasmic protein TonB
D RC1_3835 tonB; protein TonB K03832 tonB; periplasmic protein TonB
D RC1_1799 omp16; outer membrane lipoprotein omp16 K03640 pal; peptidoglycan-associated lipoprotein
D RC1_2060 hypothetical protein K03646 tolA; colicin import membrane protein
D RC1_1800 tolB; protein TolB precursor K03641 tolB; TolB protein
D RC1_1333 hppA; V-typeh(+)-translocating pyrophosphatase, putative K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RC1_4050 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D RC1_0358 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D RC1_0813 conserved hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D RC1_2734 HlyD family secretion protein K13408 cvaA; membrane fusion protein
D RC1_3226 HlyD family secretion protein K18901 bpeE; membrane fusion protein, multidrug efflux system
D RC1_3899 acrE; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3245 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_0280 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_1429 HlyD family secretion protein K18990 vexE; membrane fusion protein, multidrug efflux system
D RC1_3748 HlyD family secretion protein K18145 adeA; membrane fusion protein, multidrug efflux system
D RC1_2438 macA; macrolide-specific efflux protein MacA precursor K13888 macA; membrane fusion protein, macrolide-specific efflux system
D RC1_4006 exoP; succinoglycan biosynthesis transport protein ExoP K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RC1_2533 exoP; succinoglycan biosynthesis transport protein ExoP, putative K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RC1_2449 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RC1_2448 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RC1_3373 ecnAB; entericidin EcnAB family protein K16348 ecnB; entericidin B
D RC1_0568 conserved domain protein K16348 ecnB; entericidin B
D RC1_3020 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D RC1_3382 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:rce02044]
D RC1_1160 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RC1_0357 prtD; proteases secretion ATP-binding protein PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RC1_0358 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D RC1_2734 HlyD family secretion protein K13408 cvaA; membrane fusion protein
D RC1_2728 cvaB; colicin V secretion K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RC1_2874 conserved hypothetical protein K02221 yggT; YggT family protein
D RC1_1190 ComEC K02238 comEC; competence protein ComEC
D RC1_0790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RC1_0191 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RC1_0189 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RC1_0895 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RC1_0889 flhB; flagellar biosynthetic protein FlhB, putative K04061 flhB2; flagellar biosynthesis protein
D RC1_0180 flhB; flagellar biosynthetic protein FlhB, putative K04061 flhB2; flagellar biosynthesis protein
D RC1_0184 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RC1_0795 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RC1_0794 fliH; flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D RC1_0183 fliH; flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D RC1_0198 fliI; H+-transporting two-sector ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RC1_1751 fliI; H+-transporting two-sector ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RC1_0793 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_3209 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_1271 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_0182 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_0887 fliO; flagellar assembly protein FliO, putative K02418 fliO; flagellar protein FliO/FliZ
D RC1_0886 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RC1_0181 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RC1_0194 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RC1_0893 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RC1_0190 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RC1_0894 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RC1_3440 outer membrane autotransporter barrel domain protein K12686 apeE; outer membrane lipase/esterase
D RC1_0157 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D RC1_0158 fimbrial usher protein, putative K07347 fimD; outer membrane usher protein
D RC1_2667 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RC1_2589 secB; protein-export chaperone SecB, putative K03071 secB; preprotein translocase subunit SecB
D RC1_1042 secD; protein-export membrane protein SecD, putative K03072 secD; preprotein translocase subunit SecD
D RC1_1012 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D RC1_0695 secE; Preprotein translocase SecE subunit, putative K03073 secE; preprotein translocase subunit SecE
D RC1_0995 secF; protein-export membrane protein SecF, putative K03074 secF; preprotein translocase subunit SecF
D RC1_0113 secG; preprotein translocase, SecG subunit, putative K03075 secG; preprotein translocase subunit SecG
D RC1_0731 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RC1_2204 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RC1_2195 ftsY; cell division ABC transporter, periplasmic substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RC1_1041 yajC; preprotein translocase subunit YajC, putative K03210 yajC; preprotein translocase subunit YajC
D RC1_2283 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RC1_1011 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RC1_1031 conserved domain protein K03116 tatA; sec-independent protein translocase protein TatA
D RC1_0677 conserved domain protein K03116 tatA; sec-independent protein translocase protein TatA
D RC1_1032 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RC1_1033 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rce02042]
D RC1_2523 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RC1_2674 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rce02022]
D RC1_3261 phoR; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RC1_3267 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RC1_1894 sensor histidine kinase, putative K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RC1_1893 ompR; transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RC1_2146 response regulator receiver domain protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RC1_0433 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RC1_0432 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RC1_1780 torR; TorCAD operon transcriptional regulatory protein TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D RC1_0993 yycF; transcriptional regulatory protein YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D RC1_2826 chvG; sensor protein ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RC1_0501 sensor histidine kinase, putative K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RC1_2825 chvI; transcriptional regulatory protein ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RC1_0500 chvl; transcriptional regulatory protein ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RC1_3746 adeS; two component sensor histidine kinase AdeS, putative K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RC1_3747 adeR; DNA-binding response regulator AdeR, putative K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RC1_0686 two-component transcriptional regulator, putative K02483 K02483; two-component system, OmpR family, response regulator
D RC1_1000 DNA-binding response regulator, putative K02483 K02483; two-component system, OmpR family, response regulator
D RC1_0475 two component response transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D RC1_4054 gltR; two-component response regulator GltR K02483 K02483; two-component system, OmpR family, response regulator
D RC1_4058 fixJ; transcriptional regulatory protein FixJ K02483 K02483; two-component system, OmpR family, response regulator
D RC1_1407 narL; nitrate/nitrite response regulator protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RC1_0848 transcriptional regulator, LuxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RC1_1406 narP; nitrate/nitrite response regulator protein narP,putative K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RC1_0128 ntrB; Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RC1_0129 ntrC; Nitrogen assimilation regulatory protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RC1_0130 ntrY; Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RC1_0131 ntrX; Nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RC1_2124 cstS3; cstS3 K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RC1_1758 cheAY; chemotaxis protein CheA (C terminus homologous to cheY) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0337 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_2126 cheA3; Histidine Sensor Kinase CheA3 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0955 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0339 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0353 cheY; chemotaxis protein CheY, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1756 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0350 response regulator receiver domain protein REC K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1424 cheYIII; chemotaxis protein cheYIII, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1755 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_0342 cheB2; chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_2125 cheB3; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_3878 chemotaxis protein methyltransferase, putative K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RC1_3224 ppr; bacteriophytochrome Ppr (contains PYP domain) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RC1_3349 sensor histidine kinase, putative K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D RC1_1532 response regulator With diguanylate cyclase (GGDEF) domain, putative K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RC1_1533 divK; cell division response regulator protein DivK K11443 divK; two-component system, cell cycle response regulator DivK
D RC1_0896 cckA; cell cycle histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RC1_4057 cckA; cell cycle histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RC1_1752 ctrA; cell cycle transcriptional regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RC1_0209 ctrA; cell cycle transcriptional regulator (CheY-like receiver domain) CtrA, putative K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RC1_0355 fixJ; transcriptional regulatory protein FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D RC1_0791 flbD; transcriptional regulatory protein FlbD (LafK) K10943 flrC; two-component system, response regulator FlrC
D RC1_2541 regB; sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RC1_2542 regA; photosynthetic apparatus regulatory protein RegA K15012 regA; two-component system, response regulator RegA
D RC1_3342 Complexhybrid Signal Transduction Protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RC1_1172 sensor histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RC1_3033 sensor protein torS, putative K20976 hptB; histidine phosphotransfer protein HptB
D RC1_2159 histidine-containing phosphotransfer (HPt) domain protein K20976 hptB; histidine phosphotransfer protein HptB
D RC1_1368 response regulator receiver domain protein K22010 pdtaR; two-component system, response regulator PdtaR
D RC1_1433 response regulator receiver domain protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:rce02035]
D RC1_1758 cheAY; chemotaxis protein CheA (C terminus homologous to cheY) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0337 cheA2; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_2126 cheA3; Histidine Sensor Kinase CheA3 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RC1_0343 cheW2; chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_1757 cheW; purine-binding chemotaxis protein Chew, putative K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_2132 cheW3a; cheW3a K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_2129 cheW3b; cheW3b K03408 cheW; purine-binding chemotaxis protein CheW
D RC1_0340 cheR2; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_1754 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_2130 cheR3; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RC1_1755 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_0342 cheB2; chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_2125 cheB3; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RC1_3878 chemotaxis protein methyltransferase, putative K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RC1_0955 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0339 cheY2; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0353 cheY; chemotaxis protein CheY, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1756 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0350 response regulator receiver domain protein REC K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_1424 cheYIII; chemotaxis protein cheYIII, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RC1_0882 cheZ; chemotaxis phosphatase protein CheZ, putative K03414 cheZ; chemotaxis protein CheZ
D RC1_0872 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_1179 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0344 mcp2; methyl-accepting chemotaxis protein Mcp K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0383 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0477 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0540 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0295 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0327 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0897 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_0898 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_1836 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_2174 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_2261 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_4059 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_4093 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3067 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3024 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3863 aer; aerotaxis sensor receptor Aer K03406 mcp; methyl-accepting chemotaxis protein
D RC1_3888 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RC1_3890 aer; aerotaxis sensor receptor Aer K03776 aer; aerotaxis receptor
D RC1_0794 fliH; flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D RC1_0183 fliH; flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D RC1_0198 fliI; H+-transporting two-sector ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RC1_1751 fliI; H+-transporting two-sector ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RC1_1750 conserved hypothetical protein K02413 fliJ; flagellar protein FliJ
D RC1_0887 fliO; flagellar assembly protein FliO, putative K02418 fliO; flagellar protein FliO/FliZ
D RC1_0886 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RC1_0181 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RC1_0194 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RC1_0893 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RC1_0190 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RC1_0894 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RC1_0790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RC1_0191 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RC1_0189 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RC1_0895 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RC1_0672 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RC1_0179 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RC1_0879 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RC1_0186 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RC1_0793 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_3209 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_1271 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_0182 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RC1_0184 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RC1_0795 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RC1_1393 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RC1_0208 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RC1_1389 flgA; flagella basal body P-ring formation protein FlgA, putative K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RC1_0219 flgA; flagella basal body P-ring formation protein FlgA, putative K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RC1_1390 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RC1_0220 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RC1_0878 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RC1_1334 fliL; flagellar basal body-associated protein FliL, putative K02415 fliL; flagellar protein FliL
D RC1_0185 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RC1_0221 hypothetical protein K02415 fliL; flagellar protein FliL
D RC1_0195 fliE; flagellar hook-basal body complex protein FliE, putative K02408 fliE; flagellar hook-basal body complex protein FliE
D RC1_0892 fliE; flagellar hook-basal body complex protein FliE, putative K02408 fliE; flagellar hook-basal body complex protein FliE
D RC1_0224 fliK; Flagellar hook-length control protein FliK, putative K02414 fliK; flagellar hook-length control protein FliK
D RC1_1397 fliK; flagellar hook-length control protein FliK, putative K02414 fliK; flagellar hook-length control protein FliK
D RC1_0197 flgB; flagellar basal-body rod protein FlgB, putative K02387 flgB; flagellar basal-body rod protein FlgB
D RC1_0890 flgB; flagellar basal-body rod protein FlgB, putative K02387 flgB; flagellar basal-body rod protein FlgB
D RC1_3041 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RC1_0196 flgC; flagellar basal-body rod protein FlgC, putative K02388 flgC; flagellar basal-body rod protein FlgC
D RC1_0891 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RC1_0223 flgD; basal-body rod modification protein FlgD, putative K02389 flgD; flagellar basal-body rod modification protein FlgD
D RC1_1398 flgD; basal-body rod modification protein FlgD, putative K02389 flgD; flagellar basal-body rod modification protein FlgD
D RC1_1387 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RC1_0217 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RC1_1388 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RC1_0218 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RC1_1394 cheL; chemotactic signal-response protein CheL, putative K02395 flgJ; peptidoglycan hydrolase FlgJ
D RC1_0207 cheL; chemotactic signal-response protein CheL, putative K02395 flgJ; peptidoglycan hydrolase FlgJ
D RC1_0212 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RC1_3758 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RC1_0211 flgK; flagellar hook-associated protein 1 FlgK, putative K02396 flgK; flagellar hook-associated protein 1
D RC1_3761 flgK; flagellar hook-associated protein FlgK, putative K02396 flgK; flagellar hook-associated protein 1
D RC1_0210 flgL; flagellar hook-associated protein 3 FlgL, putative K02397 flgL; flagellar hook-associated protein 3 FlgL
D RC1_3762 flgL; flagellar hook-associated protein 3 FlgL, putative K02397 flgL; flagellar hook-associated protein 3 FlgL
D RC1_0205 flaB; flagellin protein FlaB (LafA), putative K02406 fliC; flagellin
D RC1_3763 lafA; flagellar protein Laf1 (LafA or FlaB) K02406 fliC; flagellin
D RC1_0214 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1009 MotA K02556 motA; chemotaxis protein MotA
D RC1_0792 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_2695 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D RC1_1361 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0884 motB; chemotaxis MotB protein, putative K02557 motB; chemotaxis protein MotB
D RC1_1826 motB; chemotaxis MotB protein, putative K02557 motB; chemotaxis protein MotB
D RC1_1008 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0213 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RC1_0791 flbD; transcriptional regulatory protein FlbD (LafK) K10943 flrC; two-component system, response regulator FlrC
D RC1_0204 flaF; flagellar protein FlaF, putative K06602 flaF; flagellar biosynthesis activator protein FlaF
D RC1_3764 flaF; flagellar protein FlaF, putative K06602 flaF; flagellar biosynthesis activator protein FlaF
D RC1_0203 flbT; flagellum biosynthesis repressor protein FlbT, putative K06601 flbT; flagellar biosynthesis repressor protein FlbT
D RC1_3760 flbT; flagellum biosynthesis repressor protein K06601 flbT; flagellar biosynthesis repressor protein FlbT
D RC1_0789 flhF; flagellar GTP-binding protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D RC1_0788 fleN; flagellar synthesis regulator, FleN K04562 flhG; flagellar biosynthesis protein FlhG
D RC1_0157 conserved hypothetical protein K07346 fimC; fimbrial chaperone protein
D RC1_0158 fimbrial usher protein, putative K07347 fimD; outer membrane usher protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rce04812]
D RC1_1968 mreB; rod shape-determining protein MreB (actin-like ATPase domain) K03569 mreB; rod shape-determining protein MreB and related proteins
D RC1_0607 ftsA; cell division protein FtsA, putative K03590 ftsA; cell division protein FtsA
D RC1_3503 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RC1_3502 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RC1_3501 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RC1_2812 ATPase involved in chromosome partitioning, putative K03496 parA; chromosome partitioning protein
D RC1_1628 ATPase involved in chromosome partitioning, putative K03496 parA; chromosome partitioning protein
D RC1_2413 ATPase involved in chromosome partitioning, putative K03496 parA; chromosome partitioning protein
D RC1_0168 cobyrinic acid a,c-diamide synthase, putative K03496 parA; chromosome partitioning protein
D RC1_3742 repA; replication protein A, putative K03496 parA; chromosome partitioning protein
D RC1_2813 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RC1_3743 conserved hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rce04147]
D RC1_2425 molecular chaperone,hSP90 family, putative K04079 HSP90A; molecular chaperone HtpG
D RC1_0117 eno; phosphopyruvate hydratase, putative K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RC1_1818 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RC1_3381 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RC1_2135 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RC1_2401 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RC1_3716 renal dipeptidase superfamily, putative K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RC1_2595 groL; chaperonin GroL, putative K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RC1_2858 dnaK; chaperone protein DnaK, putative K04043 dnaK; molecular chaperone DnaK
D RC1_3592 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RC1_1181 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RC1_3591 gnl; putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RC1_0155 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RC1_0693 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RC1_0709 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D RC1_3301 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RC1_3506 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RC1_3673 lcfA; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2696 AMP-dependent synthetase and ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_3535 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_2964 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RC1_1744 fadA; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_3948 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_0397 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RC1_2714 ahcY; adenosylhomocysteinase, putative K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RC1_0732 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RC1_1445 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RC1_4103 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RC1_2886 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RC1_1986 cystathionine gamma-synthase (CGS) (O-succinylhomoserine(Thiol)-lyase) K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RC1_4065 cbbF; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RC1_1747 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RC1_0515 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RC1_0267 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RC1_1258 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1465 glutamine synthetase, putative K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1466 puuA; gamma-glutamylputrescine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RC1_1353 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RC1_3343 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RC1_2997 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RC1_1786 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RC1_2352 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RC1_0122 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_2259 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RC1_4109 etfL; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RC1_3696 fixB; Electron transfer flavoprotein, alpha subunit, FixB (essential for nitrogen fixation) K03522 fixB; electron transfer flavoprotein alpha subunit
D RC1_0112 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RC1_3965 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rce02048]
D RC1_3488 cas1; CRISPR-associated protein Cas1, putative K15342 cas1; CRISP-associated protein Cas1
D RC1_3334 cas1; CRISPR-associated protein Cas1, putative K15342 cas1; CRISP-associated protein Cas1
D RC1_3489 cas2; CRISPR-associated protein Cas2, putative K09951 cas2; CRISPR-associated protein Cas2
D RC1_3333 cas2; CRISPR-associated protein Cas2, putative K09951 cas2; CRISPR-associated protein Cas2
D RC1_1930 cas2; CRISPR-associated protein Cas2, putative K09951 cas2; CRISPR-associated protein Cas2
D RC1_1925 CRISPR-associatedhD domain protein, putative K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RC1_3340 cas3; CRISPR-associated helicase Cas3, putative K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RC1_3339 CRISPR-associated protein, CT1972 family K19123 casA; CRISPR system Cascade subunit CasA
D RC1_3338 CRISPR-associated protein, CT1973 family K19046 casB; CRISPR system Cascade subunit CasB
D RC1_3337 CRISPR-associated protein, CT1975 family K19124 casC; CRISPR system Cascade subunit CasC
D RC1_3336 CRISPR-associated protein, CT1976 family K19125 casD; CRISPR system Cascade subunit CasD
D RC1_3335 CRISPR-associated protein, CT1974 family K19126 casE; CRISPR system Cascade subunit CasE
D RC1_1927 CRISPR-associated protein, GSU0053 family K19131 csb1; CRISPR-associated protein Csb1
D RC1_1928 CRISPR-associated protein, GSU0054 family K19132 csb2; CRISPR-associated protein Csb2
D RC1_1926 conserved hypothetical protein K19135 csx14; CRISPR-associated protein Csx14
D RC1_3482 CRISPR-associated protein, TM1794 family K19076 cmr2; CRISPR-associated protein Cmr2
D RC1_3483 CRISPR-associated protein, TM1793 family K09127 cmr3; CRISPR-associated protein Cmr3
D RC1_3484 CRISPR-associated RAMP protein, putative K09000 cmr4; CRISPR-associated protein Cmr4
D RC1_3485 hypothetical protein K19141 cmr5; CRISPR-associated protein Cmr5
D RC1_3486 CRISPR-associated protein, TM1791 family K19142 cmr6; CRISPR-associated protein Cmr6
D RC1_3487 CRISPR-associated protein, putative K19145 csx16; CRISPR-associated protein Csx16
D RC1_3173 ccrM; modification methylase, putative K13581 ccrM; modification methylase [EC:2.1.1.72]
D RC1_0095 type III restriction enzyme, res subunit, putative K01156 res; type III restriction enzyme [EC:3.1.21.5]
D RC1_0097 type III restriction-modification system methyltransferase, putative K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RC1_2489 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RC1_3396 conserved hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D RC1_3494 conserved hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D RC1_3397 conserved hypothetical protein K19156 prlF; antitoxin PrlF
D RC1_2490 transcriptional regulator, SpoVT K19156 prlF; antitoxin PrlF
D RC1_2922 yoeB; Toxin yoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D RC1_2921 yefM; antitoxin yefM K19159 yefM; antitoxin YefM
D RC1_2380 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RC1_0704 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RC1_2435 conserved hypothetical protein K18843 hicB; antitoxin HicB
D RC1_2517 pspC; phage shock protein C K03973 pspC; phage shock protein C
D RC1_3651 pspC; phage shock protein C K03973 pspC; phage shock protein C
D RC1_2518 hypothetical protein K03973 pspC; phage shock protein C
D RC1_2516 pspB; phage shock protein B K03970 pspB; phage shock protein B
D RC1_2519 pspB; phage shock protein B K03970 pspB; phage shock protein B
D RC1_0081 plasmid stabilization system protein, RelE K19092 parE1_3_4; toxin ParE1/3/4
D RC1_2758 plasmid stabilization protein ParE, putative K19092 parE1_3_4; toxin ParE1/3/4
D RC1_0082 transcriptional regulators (CopG/Arc/MetJ DNA-binding domain), putative K07746 parD1_3_4; antitoxin ParD1/3/4
D RC1_2840 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D RC1_3076 plasmid maintenance system killer protein, putative K07334 higB-1; toxin HigB-1
D RC1_2841 DNA-binding protein, putative K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D RC1_2790 proteic killer active protein, putative K21498 higA-1; antitoxin HigA-1
D RC1_3075 virulence-associated protein, putative K21498 higA-1; antitoxin HigA-1
D RC1_3049 vapB; virulence associated protein B, putative K18829 mvpT; antitoxin VapB
D RC1_3718 conserved hypothetical protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D RC1_3584 stbB; plasmid stability protein StbB, putative K07062 fitB; toxin FitB [EC:3.1.-.-]
D RC1_3719 plasmid stability protein, putative K21495 fitA; antitoxin FitA
D RC1_2042 conserved hypothetical protein K21495 fitA; antitoxin FitA
D RC1_1968 mreB; rod shape-determining protein MreB (actin-like ATPase domain) K03569 mreB; rod shape-determining protein MreB and related proteins
D RC1_1481 parC; DNA topoisomerase IV, A subunit, putative K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RC1_1371 parE; DNA topoisomerase IV, B subunit, putative K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RC1_0975 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_1191 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RC1_1263 TPR domain protein K09159 cptB; antitoxin CptB
D RC1_1616 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RC1_0478 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rce04090]
D RC1_1181 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:rce01504]
D RC1_0237 butA; Aminoglycoside 3'-phosphotransferase, putative K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95]
D RC1_1688 tetA; tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RC1_2952 drug resistance transporter, Bcr K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D RC1_2612 vanX; D-alanyl-D-alanine dipeptidase VanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RC1_0298 conserved hypothetical membrane protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D RC1_3899 acrE; acriflavine resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3245 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_0280 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RC1_3244 AcrB K18138 acrB; multidrug efflux pump
D RC1_3898 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D RC1_0281 AcrB K18138 acrB; multidrug efflux pump
D RC1_3886 acrF; acriflavine resistance protein F K18138 acrB; multidrug efflux pump
D RC1_3750 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D RC1_0106 hmrR; HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RC1_3746 adeS; two component sensor histidine kinase AdeS, putative K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RC1_3747 adeR; DNA-binding response regulator AdeR, putative K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RC1_3748 HlyD family secretion protein K18145 adeA; membrane fusion protein, multidrug efflux system
D RC1_3749 acrB; acriflavine resistance protein B K18146 adeB; multidrug efflux pump
D RC1_1160 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RC1_3226 HlyD family secretion protein K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rce00537]
D RC1_3716 renal dipeptidase superfamily, putative K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rce03100]
D RC1_2872 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_2628 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_3540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_3705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_2494 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RC1_1085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RC1_3341 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RC1_3031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RC1_2736 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RC1_1155 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RC1_1241 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RC1_2735 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RC1_1157 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RC1_3968 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RC1_3191 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RC1_1302 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RC1_0692 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RC1_2377 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RC1_2497 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RC1_1256 tRNA-His K14226 tRNA-His; tRNA His
D RC1_2629 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RC1_3539 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RC1_3706 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RC1_4122 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RC1_0406 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RC1_3198 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RC1_1250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RC1_1962 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RC1_1963 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RC1_1061 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RC1_0939 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_0371 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_2625 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_3702 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_2063 tRNA-Met K14230 tRNA-Met; tRNA Met
D RC1_1643 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RC1_1677 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RC1_1323 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RC1_1083 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RC1_2546 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RC1_1538 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RC1_0031 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RC1_1015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RC1_1657 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RC1_0687 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RC1_2434 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RC1_0694 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RC1_0691 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RC1_1243 tRNA-Val K14237 tRNA-Val; tRNA Val
D RC1_1597 tRNA-Val K14237 tRNA-Val; tRNA Val
D RC1_3518 tRNA-Val K14237 tRNA-Val; tRNA Val
D RC1_0374 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3707 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_2630 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3538 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RC1_3541 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_0372 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_3704 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_2627 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RC1_0373 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RC1_3703 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RC1_2626 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RC1_2003 ssrA; 10Sa RNA (tmRNA) K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RC1_0028 glucose/sorbosone dehydrogenase, putative K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RC1_3944 oxidoreductase, short chain dehydrogenase K11166 DHRS7B; dehydrogenase/reductase SDR family member 7B [EC:1.1.-.-]
D RC1_3239 calB; coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D RC1_1076 coxS; carbon monoxide dehydrogenase small chain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RC1_1074 coxM; carbon monoxide dehydrogenase medium chain K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RC1_1075 coxL; carbon monoxide dehydrogenase large chain K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RC1_3164 pyruvate ferredoxin K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RC1_0548 oxidoreductase, zinc-binding dehydrogenase family K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D RC1_3182 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RC1_3697 fixC; Electron-transferring-flavoprotein dehydrogenaseFixC (essential for nitrogen fixation) K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D RC1_2804 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RC1_2742 oxidoreductase, zinc-binding dehydrogenase family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RC1_1859 oxidoreductase, zinc-binding dehydrogenase family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RC1_0809 msrA; Peptide methionine-S-sulfoxide reductase MsrA, putative K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RC1_1938 glutathione S-transferase familiy protein, putative K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RC1_1480 glutathione S-transferase family protein, putative K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RC1_3391 transferase, putative K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RC1_0629 Oxidoreductase molybdopterin binding domain protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RC1_3828 ccpA; di-heme cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RC1_2689 manganese containing catalase, putative K07217 ydbD; manganese catalase [EC:1.11.1.6]
D RC1_2982 hydrolase, alpha K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RC1_1625 bacterioferritin comigratory protein, putative K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RC1_2171 ohr; organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RC1_0833 OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RC1_0440 ahpD; alkyl hydroperoxide reductase D K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D RC1_0439 ahpC; alkyl hydroperoxide reductase C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D RC1_1935 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RC1_1043 y4aB; Hypothetical 44.6 kDa protein y4aB K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D RC1_2176 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RC1_3700 arsC; arsenate reductase, putative K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RC1_2995 arsC; probable arsenate reductase ArsC, putative K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RC1_0317 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RC1_1420 hyfB; hydrogenase-4 component B, membrane subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D RC1_1418 hyfE; hydrogenase-4 membrane subunit E K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D RC1_1417 hyfF; hydrogenase-4 membrane subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D RC1_1036 pcm; protein-L-isoaspartate O-methyltransferase, putative K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RC1_1158 pcm; protein-L-isoaspartate O-methyltransferase, putative K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RC1_2029 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RC1_1576 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RC1_2278 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D RC1_3842 hemN; oxygen-independent coproporphyrinogen-III oxidase, putative K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D RC1_3386 nat; arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D RC1_2974 lnt; apolipoprotein N-acyltransferase Lnt, putative K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RC1_2606 acyltransferase, putative K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D RC1_0926 aat; leucyl/phenylalanyl-tRNA--protein transferase, putative K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RC1_1364 arginine-tRNA-protein transferase, putative K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RC1_2607 hemolysin, putative K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D RC1_2484 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D RC1_1902 lgt; prolipoprotein diacylglyceryl transferase, Lgt family, putative K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RC1_3907 nosX; NosX protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RC1_2192 apbE; thiamine biosynthesis lipoprotein, putative K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RC1_2799 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RC1_1624 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RC1_1140 phage-encoded reverse transcriptase, putative K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D RC1_2560 GGDEF domain protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D RC1_2867 hprK; HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RC1_1954 conserved hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RC1_1804 small, thioesterase-like enzyme subunit, putative K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RC1_2749 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RC1_1545 sixA; phosphohistidine phosphatase SixA, putative K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RC1_1170 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RC1_2345 Staphylococcal nuclease-like protein, putative K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D RC1_1695 dacA; D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RC1_0623 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RC1_0070 amiB; N-acetylmuramoyl-L-alanine amidase, phage related protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RC1_2069 def; peptide deformylase, Def, putative K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RC1_2298 def; peptide deformylase, Def, putative K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RC1_2659 Carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RC1_0774 conserved hypothetical protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D RC1_1546 adenylate cyclase, putative K18446 ygiF; triphosphatase [EC:3.6.1.25]
D RC1_2414 adenylate cyclase, putative K18446 ygiF; triphosphatase [EC:3.6.1.25]
D RC1_3415 ATPase, putative K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RC1_2458 conserved hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D RC1_1253 YjeF family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RC1_1309 conserved hypothetical protein K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-]
D RC1_1044 fusion protein of y4aC and y4aD, putative K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D RC1_1386 peptidyl-prolyl cis-trans isomerase family protein, putative K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RC1_1385 peptidyl-prolyl cis-trans isomerase family protein, putative K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RC1_2265 peptidyl-prolyl cis-trans isomerase family protein, putative K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RC1_2522 feruloyl-CoA synthetase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D RC1_1274 fixI; nitrogen fixation protein FixI (coupling cation pump) K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RC1_0300 mgtA; magnesium-transporting ATPase, P-type 1 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D RC1_3392 sfsA; sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D RC1_2879 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RC1_2880 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RC1_2881 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D RC1_1614 fdx; ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D RC1_2222 fdxA; ferredoxin II K05524 fdxA; ferredoxin
D RC1_0489 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D RC1_0479 nifU; Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein
D RC1_0481 nifQ; nitrogen fixation protein NifQ K15790 nifQ; nitrogen fixation protein NifQ
D RC1_0242 cbbO; rubisco activation protein CbbO, putative K02448 norD; nitric oxide reductase NorD protein
D RC1_0241 cbbQ; CbbQ K04748 norQ; nitric oxide reductase NorQ protein
D RC1_0456 napD; NapD protein K02570 napD; periplasmic nitrate reductase NapD
D RC1_0455 napF; ferredoxin-type protein Na PF K02572 napF; ferredoxin-type protein NapF
D RC1_0454 napE; periplasmic reductase, NapE K02571 napE; periplasmic nitrate reductase NapE
D RC1_3679 nifX; nitrogenase molybdenum-iron protein, NifX K02596 nifX; nitrogen fixation protein NifX
D RC1_3687 nifT; NifT/FixU protein (may be involved in biosynthesis of the FeMo cofactor of nitrogenase) K02593 nifT; nitrogen fixation protein NifT
D RC1_3688 nifZ; nitrogen fixation protein NifZ K02597 nifZ; nitrogen fixation protein NifZ
D RC1_3690 nifB; FeMo cofactor biosynthesis protein nifB K02585 nifB; nitrogen fixation protein NifB
D RC1_3680 nifEN; nitrogenase MoFe cofactor biosynthesis protein NifEN K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D RC1_0459 napC; membrane-anchored tetraheme c-type cytochrome, NapC K02569 napC; cytochrome c-type protein NapC
D RC1_4110 etfS; electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D RC1_3695 fixA; Electron transfer flavoprotein, beta subunit FixA (essential for nitrogen fixation) K03521 fixA; electron transfer flavoprotein beta subunit
D RC1_3698 fixX; ferredoxin-like protein, FixX K03855 fixX; ferredoxin like protein
D RC1_3694 nifW; Nitrogenase-stabilizing/protective protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
C 99983 Lipid metabolism
D RC1_0013 Acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
D RC1_1706 sterol desaturase family protein K22618 olsE; ornithine lipid hydroxylase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RC1_2768 conserved hypothetical protein K06203 cysZ; CysZ protein
D RC1_2548 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RC1_0922 conserved hypothetical membrane protein K07027 K07027; glycosyltransferase 2 family protein
D RC1_3105 cell wall hydrolyse, putative K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D RC1_2366 hemY; HemY domain protein K02498 hemY; HemY protein
D RC1_3269 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D RC1_0936 conserved hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D RC1_2083 bchO; magnesium-chelatase 30 kDa subunit K06049 bchO; magnesium chelatase accessory protein
D RC1_0985 mtrF; efflux pump component MtrF K12942 abgT; aminobenzoyl-glutamate transport protein
D RC1_2068 rpsU-divergently transcribed protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D RC1_0124 conserved hypothetical protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D RC1_2764 acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RC1_3328 conserved domain protein K03704 cspA; cold shock protein
D RC1_3671 cspA; cold shock-like protein CspA K03704 cspA; cold shock protein
D RC1_2161 cspG; Cold shock-like protein CspG K03704 cspA; cold shock protein
D RC1_2783 glnZ; nitrogen regulatory protein pZ K04752 glnK; nitrogen regulatory protein P-II 2
D RC1_1421 tex; Tex-like protein, transcription accessory protein (S1 RNA binding domain) K06959 tex; protein Tex
C 99974 Translation
D RC1_0303 ABC transporter, ATP-binding protein K13926 rbbA; ribosome-dependent ATPase
D RC1_3727 ABC transporter, ATP-binding protein K13926 rbbA; ribosome-dependent ATPase
D RC1_3813 metallo-beta-lactamase, putative K07576 K07576; metallo-beta-lactamase family protein
D RC1_0646 conserved hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D RC1_1692 clpS; ATP-dependent Clp protease adaptor protein ClpS,putative K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RC1_1249 tig; trigger factor TF, putative K03545 tig; trigger factor
D RC1_2327 hypothetical protein K03192 ureJ; urease accessory protein
D RC1_1505 ssrA; SsrA-binding protein SsrA K03664 smpB; SsrA-binding protein
D RC1_2955 Mg chelatase related protein K07391 comM; magnesium chelatase family protein
D RC1_2583 conserved hypothetical protein K07394 K07394; SM-20-related protein
D RC1_1694 conserved hypothetical protein K07395 K07395; putative proteasome-type protease
D RC1_2532 gst; glutathione S-transferase, putative K11208 yncG; GST-like protein
C 99976 Replication and repair
D RC1_3071 conserved hypothetical protein K07454 K07454; putative restriction endonuclease
D RC1_3389 DNA repair protein RadC, putative K03630 radC; DNA repair protein RadC
D RC1_2299 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D RC1_3037 conserved hypothetical protein K07460 yraN; putative endonuclease
D RC1_1527 dprA; DNA processing protein DprA, putative K04096 smf; DNA processing protein
D RC1_0428 ATPase, AAA family K07478 ycaJ; putative ATPase
D RC1_3026 mdh; malate dehydrogenase K07483 K07483; transposase
D RC1_1992 transposase, putative K07497 K07497; putative transposase
D RC1_1091 phage transposase protein A K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RC1_2515 pspA; phage shock protein A K03969 pspA; phage shock protein A
D RC1_3650 pspA; phage shock protein A K03969 pspA; phage shock protein A
D RC1_2305 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RC1_0391 yfdC; inner membrane protein YfdC, putative K21990 yfdC; formate-nitrite transporter family protein
D RC1_2030 major facilitator superfamily transport protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RC1_1951 amino acid/peptide transporter protein, putative K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RC1_0199 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RC1_2706 sodium/solute symporter, putative K03307 TC.SSS; solute:Na+ symporter, SSS family
D RC1_3377 sodium:neurotransmitter symporter family protein, putative K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
C 99978 Cell growth
D RC1_3945 ispZ; intracellular septation protein A, putative K06190 ispZ; intracellular septation protein
D RC1_3975 ytfE; regulator of cell morphogenesis and NO signaling, putative K07322 ytfE; regulator of cell morphogenesis and NO signaling
D RC1_4023 conserved hypothetical protein K06320 cgeB; spore maturation protein CgeB
D RC1_0036 gin; Gin (G segment invertase), phage site-specific recombinase, resolvase K06400 spoIVCA; site-specific DNA recombinase
D RC1_3554 SpoVR like protein K06415 spoVR; stage V sporulation protein R
D RC1_0556 membrane-bound metallopeptidase, putative K22719 envC; murein hydrolase activator
C 99993 Cell motility
D RC1_2005 TfoX N-terminal domain protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D RC1_0574 cstA; Carbon starvation protein CstA K06200 cstA; carbon starvation protein
D RC1_3946 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D RC1_2981 chrR; transcriptional activator ChrR K07167 chrR; putative transcriptional regulator
D RC1_2977 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RC1_3505 Phosphate starvation-inducible PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RC1_3552 protein prkA, putative K07180 prkA; serine protein kinase
D RC1_3221 nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D RC1_2651 conserved hypothetical protein K07182 K07182; CBS domain-containing protein
D RC1_1173 kaiC; circadian clock protein kinase KaiC, putative K08482 kaiC; circadian clock protein KaiC
D RC1_3464 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RC1_2052 VacJ like lipoprotein, putative K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RC1_3917 VacJ like lipoprotein, putative K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RC1_0743 VacJ like lipoprotein, putative K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RC1_1199 ompH; outer membrane protein OmpH precursor K06142 hlpA; outer membrane protein
D RC1_1607 ompW; outer membrane protein OmpW, putative K07275 ompW; outer membrane protein
D RC1_1761 conserved hypothetical protein K07289 asmA; AsmA protein
D RC1_1771 nfeD; nodulation efficiency protein D, putative K07340 ybbJ; inner membrane protein
D RC1_2056 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D RC1_0304 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D RC1_3726 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D RC1_1642 HlyD family secretion protein K02005 ABC.CD.TX; HlyD family secretion protein
D RC1_3282 hlyD; HlyD family secretion protein K02005 ABC.CD.TX; HlyD family secretion protein
D RC1_3017 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D RC1_3022 ccmH; cytochrome C-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RC1_3023 cycH; cytochrome c-type biogenesis protein CycH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D RC1_3266 phoU; phosphate transport system protein PhoU K02039 phoU; phosphate transport system protein
D RC1_0669 phoU; phosphate transport system protein PhoU K02039 phoU; phosphate transport system protein
D RC1_3427 conserved domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D RC1_3370 Integral membrane protein TerC family K05794 terC; tellurite resistance protein TerC
D RC1_1321 cutA; divalent cation tolerance protein, putative K03926 cutA; periplasmic divalent cation tolerance protein
D RC1_2375 apaG; ApaG protein K06195 apaG; ApaG protein
D RC1_3911 nosD; periplasmic copper-binding protein, NosD K07218 nosD; nitrous oxidase accessory protein
D RC1_3858 hmuS; hemin transport protein K07225 hmuS; putative hemin transport protein
D RC1_3843 conserved hypothetical protein K07227 chuX; heme iron utilization protein
D RC1_3978 nnrS; NnrS protein K07234 K07234; uncharacterized protein involved in response to NO
D RC1_3908 nosL; nitrous oxide reductase accessory protein NosL K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RC1_1584 cvpA; colicin V production protein, putative K03558 cvpA; membrane protein required for colicin V production
D RC1_2614 conserved hypothetical protein K03796 bax; Bax protein
D RC1_0025 acetyltransferase, gnat family K02348 elaA; ElaA protein
D RC1_2373 protein secretion chaperonine, putative K06878 K06878; tRNA-binding protein
D RC1_2232 conserved hypothetical protein K06886 glbN; hemoglobin
D RC1_1845 patatin-like phospholipase, putative K07001 K07001; NTE family protein
D RC1_1705 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RC1_2291 pyrimidine 5'-nucleotidase, putative K07025 K07025; putative hydrolase of the HAD superfamily
D RC1_1023 Iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D RC1_0493 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RC1_0491 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RC1_1437 rbn; ribonuclease BN family protein K07058 K07058; membrane protein
D RC1_0578 rbn; tRNA-processing ribonuclease BN K07058 K07058; membrane protein
D RC1_1682 phosphoribosyltransferase, putative K07100 K07100; putative phosphoribosyl transferase
D RC1_3001 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D RC1_0643 glyoxalase family protein K04750 phnB; PhnB protein
D RC1_2520 glyoxalase family protein K04750 phnB; PhnB protein
D RC1_3362 conserved domain protein K03745 slyX; SlyX protein
D RC1_1768 CreA protein, putative K05805 creA; CreA protein
D RC1_2021 yjfL; inner membrane protein YjfL K08989 K08989; putative membrane protein
D RC1_3451 conserved hypothetical protein K08990 ycjF; putative membrane protein
D RC1_1523 conserved hypothetical protein K08995 K08995; putative membrane protein
D RC1_0452 hypothetical protein K08995 K08995; putative membrane protein
D RC1_2467 conserved hypothetical protein K08995 K08995; putative membrane protein
D RC1_0466 conserved domain protein K09858 K09858; SEC-C motif domain protein
D RC1_3606 phnA; alkylphosphonate utilization operon protein PhnA, putative K06193 phnA; protein PhnA
C 99997 Function unknown
D RC1_2806 conserved hypothetical protein K06888 K06888; uncharacterized protein
D RC1_1069 conserved hypothetical protein K06889 K06889; uncharacterized protein
D RC1_2466 integral membrane protein, putative K06890 K06890; uncharacterized protein
D RC1_2394 conserved hypothetical protein K06893 K06893; uncharacterized protein
D RC1_1132 phage baseplate protein, putative K06903 W; Bacteriophage baseplate protein W
D RC1_1130 phage late control gene D protein (GPD), putative K06905 D; Bacteriophage probable baseplate hub protein
D RC1_1123 phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D RC1_1124 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D RC1_3450 conserved hypothetical protein K06918 K06918; uncharacterized protein
D RC1_1040 conserved hypothetical protein K06923 K06923; uncharacterized protein
D RC1_1318 CoA binding domain protein K06929 K06929; uncharacterized protein
D RC1_2721 conserved domain protein K06938 K06938; uncharacterized protein
D RC1_2238 conserved domain protein K06938 K06938; uncharacterized protein
D RC1_0413 conserved hypothetical protein K06940 K06940; uncharacterized protein
D RC1_2025 conserved hypothetical protein K06953 K06953; uncharacterized protein
D RC1_2027 NAD/FAD-binding protein, putative K06954 K06954; uncharacterized protein
D RC1_0651 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein
D RC1_3611 conserved hypothetical protein K06995 K06995; uncharacterized protein
D RC1_3624 glyoxalase family protein K06996 K06996; uncharacterized protein
D RC1_3443 membrane protein, putative K07003 K07003; uncharacterized protein
D RC1_0332 conserved hypothetical protein K07017 K07017; uncharacterized protein
D RC1_1620 conserved hypothetical protein K07018 K07018; uncharacterized protein
D RC1_1355 conserved hypothetical protein K07019 K07019; uncharacterized protein
D RC1_1957 conserved hypothetical protein K07028 K07028; uncharacterized protein
D RC1_0100 conserved hypothetical protein K07064 K07064; uncharacterized protein
D RC1_2669 nucleotidyltransferase, putative K07075 K07075; uncharacterized protein
D RC1_0236 conserved hypothetical protein K07077 K07077; uncharacterized protein
D RC1_1439 TRAP transporter solute receptor, TAXI family protein K07080 K07080; uncharacterized protein
D RC1_2328 TRAP transporter solute receptor, TAXI family protein K07080 K07080; uncharacterized protein
D RC1_2275 TRAP transporter solute receptor, TAXI family protein K07080 K07080; uncharacterized protein
D RC1_1255 membrane protein, putative K07086 K07086; uncharacterized protein
D RC1_2619 conserved domain protein K07090 K07090; uncharacterized protein
D RC1_2473 conserved hypothetical protein K07090 K07090; uncharacterized protein
D RC1_0247 conserved hypothetical protein K07093 K07093; uncharacterized protein
D RC1_1872 conserved hypothetical protein K07112 K07112; uncharacterized protein
D RC1_1767 ammonia monooxygenase, putative K07120 K07120; uncharacterized protein
D RC1_3190 hypothetical protein K07126 K07126; uncharacterized protein
D RC1_1662 conserved hypothetical protein K07126 K07126; uncharacterized protein
D RC1_2634 MOSC domain protein, putative K07140 K07140; MOSC domain-containing protein
D RC1_3744 conserved hypothetical protein K07149 K07149; uncharacterized protein
D RC1_2499 lonD; ATP-dependent protease La domain protein LonD K07157 K07157; uncharacterized protein
D RC1_1072 coxE; CoxE, putative K07161 K07161; uncharacterized protein
D RC1_1079 conserved hypothetical protein K09005 K09005; uncharacterized protein
D RC1_2008 GatB K09117 K09117; uncharacterized protein
D RC1_2875 conserved hypothetical protein K09131 K09131; uncharacterized protein
D RC1_1077 coxG; carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D RC1_2028 conserved hypothetical protein K09701 K09701; uncharacterized protein
D RC1_3710 conserved hypothetical protein K09703 K09703; uncharacterized protein
D RC1_3429 conserved hypothetical protein K09705 K09705; uncharacterized protein
D RC1_2062 YaiI K09768 K09768; uncharacterized protein
D RC1_2358 YCII-related protein, putative K09780 K09780; uncharacterized protein
D RC1_3029 yedI; inner membrane protein, putative K09781 K09781; uncharacterized protein
D RC1_3553 conserved hypothetical protein K09786 K09786; uncharacterized protein
D RC1_1745 ybaN; inner membrane protein YbaN, putative K09790 K09790; uncharacterized protein
D RC1_2500 conserved domain protein K09791 K09791; uncharacterized protein
D RC1_1282 membrane protein, putative K09792 K09792; uncharacterized protein
D RC1_0855 conserved domain protein K09794 K09794; uncharacterized protein
D RC1_2962 periplasmic protein, putative K09797 K09797; uncharacterized protein
D RC1_0107 conserved hypothetical protein K09798 K09798; uncharacterized protein
D RC1_3128 conserved hypothetical protein K09803 K09803; uncharacterized protein
D RC1_2254 conserved hypothetical protein K09803 K09803; uncharacterized protein
D RC1_1709 conserved hypothetical protein K09803 K09803; uncharacterized protein
D RC1_2638 conserved hypothetical protein K09803 K09803; uncharacterized protein
D RC1_1188 conserved hypothetical protein K09822 K09822; uncharacterized protein
D RC1_1644 conserved domain protein K09862 K09862; uncharacterized protein
D RC1_1922 conserved hypothetical protein K09919 K09919; uncharacterized protein
D RC1_2256 conserved hypothetical protein K09921 K09921; uncharacterized protein
D RC1_1787 conserved hypothetical protein K09922 K09922; uncharacterized protein
D RC1_1498 conserved hypothetical protein K09928 K09928; uncharacterized protein
D RC1_3184 conserved hypothetical protein K09931 K09931; uncharacterized protein
D RC1_1981 conserved hypothetical protein K09937 K09937; uncharacterized protein
D RC1_2189 PepSY-associated TM helix, putative K09939 K09939; uncharacterized protein
D RC1_1006 conserved hypothetical protein K09945 K09945; uncharacterized protein
D RC1_2139 conserved hypothetical protein K09948 K09948; uncharacterized protein
D RC1_2907 hypothetical protein K09950 K09950; uncharacterized protein
D RC1_1382 conserved hypothetical protein K09978 K09978; uncharacterized protein
D RC1_1783 conserved hypothetical protein K09982 K09982; uncharacterized protein
D RC1_2004 conserved hypothetical protein K09985 K09985; uncharacterized protein
D RC1_3416 conserved hypothetical protein K09986 K09986; uncharacterized protein
D RC1_1858 conserved hypothetical protein K09987 K09987; uncharacterized protein
D RC1_0905 conserved hypothetical protein K09989 K09989; uncharacterized protein
D RC1_1161 conserved hypothetical protein K09991 K09991; uncharacterized protein
D RC1_2018 conserved hypothetical protein K07276 K07276; uncharacterized protein
D RC1_2911 transcription terminating nucleic-acid-binding protein, putative K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 27, 2024