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Transfer RNA Biogenesis - Ricinus communis (castor bean)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D 8267323 ribonucleases P/MRP protein subunit POP1 isoform X1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 8263460 ribonuclease MRP protein subunit POP4 isoform X1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 8287562 probable ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 8278033 uncharacterized protein LOC8278033 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 8268347 proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
D 8277591 proteinaceous RNase P 2 K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
D 8258233 proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D 8265578 tRNase Z TRZ2, chloroplastic K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 8273812 tRNase Z TRZ3, mitochondrial isoform X1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 8277375 tRNase Z TRZ1 isoform X1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 8281810 extracellular ribonuclease LE K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8285340 ribonuclease 3 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8281811 ribonuclease 3 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8285338 extracellular ribonuclease LE K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8288290 ribonuclease 2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8288317 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8268358 pentatricopeptide repeat-containing protein At5g21222 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 8287865 pentatricopeptide repeat-containing protein At2g18940, chloroplastic K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 8275339 putative pentatricopeptide repeat-containing protein At2g02150 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 8277351 pentatricopeptide repeat-containing protein At2g01740 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 8271213 pentatricopeptide repeat-containing protein At5g25630 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonuclease complex
D 8285995 tRNA-splicing endonuclease subunit Sen2-1 K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 8259749 uncharacterized protein LOC8259749 K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
C tRNA splicing ligase complex
C Other tRNA splicing factors
D 8260607 putative tRNA 2'-phosphotransferase K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
D 8270612 tRNA 2'-phosphotransferase 1 isoform X1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
D 11542412 matK; maturase K K20000 MATK; maturase K
B tRNA transport factors
C tRNA export factors
D 8278571 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
D 8276715 exportin-T isoform X1 K14288 XPOT; exportin-T
D 8283076 protein EXPORTIN 1A K14290 XPO1; exportin-1
D 8288456 protein HASTY 1 K14289 XPO5; exportin-5
D 8280642 LOW QUALITY PROTEIN: elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 8280640 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 8264984 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 8289895 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 8259557 probable inactive serine/threonine-protein kinase scy1 K08876 SCYL1; SCY1-like protein 1
C tRNA import factors
D 8285354 transportin MOS14 isoform X1 K15436 TRPO3; transportin-3
D 8258141 transportin MOS14 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 8275692 glutamate--tRNA ligase, chloroplastic/mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 8274977 glutamate--tRNA ligase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 8265873 proline--tRNA ligase, cytoplasmic K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 8277109 proline--tRNA ligase, chloroplastic/mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 8264293 isoleucine--tRNA ligase, cytoplasmic K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 8278725 isoleucine--tRNA ligase, chloroplastic/mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 8277982 leucine--tRNA ligase, chloroplastic/mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 8263257 leucine--tRNA ligase, cytoplasmic isoform X1 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 8281880 leucine--tRNA ligase, cytoplasmic K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 8265961 methionine--tRNA ligase, chloroplastic/mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 8264929 methionine--tRNA ligase, cytoplasmic isoform X1 K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 8280624 probable methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 8260377 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 8265135 arginine--tRNA ligase, chloroplastic/mitochondrial isoform X2 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 8268601 arginine--tRNA ligase, cytoplasmic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 8282170 lysine--tRNA ligase, chloroplastic/mitochondrial K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 8267814 lysine--tRNA ligase, cytoplasmic K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 8282458 aspartate--tRNA ligase 2, cytoplasmic K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 8268901 aspartate--tRNA ligase, chloroplastic/mitochondrial K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 8259561 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
C Other AARSs
D 8278144 alanine--tRNA ligase, chloroplastic/mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 8286134 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 8265104 asparagine--tRNA ligase, cytoplasmic 1 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 8266755 asparagine--tRNA ligase, cytoplasmic 2 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 8265545 asparagine--tRNA ligase, chloroplastic/mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 8285695 glycine--tRNA ligase, mitochondrial 1 K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 8275948 threonine--tRNA ligase, chloroplastic/mitochondrial 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 8274778 threonine--tRNA ligase, mitochondrial 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 8281685 serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 8285368 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 8280119 serine--tRNA ligase isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 8286112 LOW QUALITY PROTEIN: serine--tRNA ligase, chloroplastic/mitochondrial K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 8261719 cysteine--tRNA ligase 2, cytoplasmic isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 8259417 cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 8260384 LOW QUALITY PROTEIN: cysteine--tRNA ligase 2, cytoplasmic-like K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 8287230 valine--tRNA ligase, mitochondrial 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 8268115 valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 8284485 histidine--tRNA ligase, chloroplastic/mitochondrial K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 8277157 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 8271422 phenylalanine--tRNA ligase alpha subunit, cytoplasmic K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 8265580 phenylalanine--tRNA ligase, chloroplastic/mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 8265532 phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 8273056 tyrosine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 8276040 tyrosine--tRNA ligase 1, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 8271168 tryptophan--tRNA ligase, chloroplastic/mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 8271146 tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D 8259182 D-aminoacyl-tRNA deacylase isoform X2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 8264581 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
B tRNA modification factors
C Deaminases
D 8261853 tRNA-specific adenosine deaminase TAD1 isoform X1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 8269352 tRNA-specific adenosine deaminase TAD2 isoform X1 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 8281346 tRNA-specific adenosine deaminase TAD3 isoform X1 K15442 TAD3; tRNA-specific adenosine deaminase 3
C Dihydorouridine synthases
D 8272978 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 8288720 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D 8284388 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
C Methylthiotransferase
D 8283243 threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1 K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
C Methyltransferases
D 8260859 tRNA (guanine(26)-N(2))-dimethyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 8277305 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 8284007 zinc finger CCCH domain-containing protein 24 isoform X1 K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 8269524 uncharacterized protein LOC8269524 isoform X1 K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
D 8273526 RNA cytosine-C(5)-methyltransferase NSUN2 isoform X1 K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202]
D 8265002 rRNA (cytosine-C(5))-methyltransferase NOP2C K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 8282934 tRNA (guanine(37)-N1)-methyltransferase 1 isoform X2 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 8278590 tRNA (guanine(37)-N1)-methyltransferase 1 isoform X1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 8281766 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 8274649 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 8269394 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 8260637 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 8282029 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 8268201 tRNA N(3)-methylcytidine methyltransferase METTL6 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 8258540 uncharacterized protein LOC8258540 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 8263009 tRNA (carboxymethyluridine(34)-5-O)-methyltransferase K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 8280124 alkylated DNA repair protein ALKBH8 homolog K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 8261745 tRNA (guanine(9)-N1)-methyltransferase K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 8280808 tRNA (guanine(10)-N2)-methyltransferase homolog K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 8265904 tRNA:m(4)X modification enzyme TRM13 K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D 8285821 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 8283146 multifunctional methyltransferase subunit TRM112 homolog A K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 8278568 tRNA (cytosine(38)-C(5))-methyltransferase 2 isoform X1 K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 8267915 tRNA (adenine(37)-N6)-methyltransferase isoform X1 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 111946220 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D 8284198 tRNA wybutosine-synthesizing protein 2/3/4 isoform X1 K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D 8265781 leucine carboxyl methyltransferase 1 homolog isoform X1 K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
C Psudouridine synthases
D 8267856 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 8263281 tRNA pseudouridine synthase A isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 8261356 tRNA pseudouridine synthase A 1 isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 8282758 putative tRNA pseudouridine synthase isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 8281410 tRNA pseudouridine(38/39) synthase K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D 8279098 uncharacterized protein LOC8279098 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 8289355 multisubstrate pseudouridine synthase 7 isoform X1 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 8269178 RNA pseudouridine synthase 7 K15454 PUS9; tRNA pseudouridine32 synthase [EC:5.4.99.28]
D 8267861 tRNA pseudouridine synthase Pus10 isoform X2 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
C Thiolation factors
D 8274461 tRNA-specific 2-thiouridylase MnmA K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 8267869 cytoplasmic tRNA 2-thiolation protein 1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 8260642 cytoplasmic tRNA 2-thiolation protein 2 K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
D 8275935 cysteine desulfurase, mitochondrial K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 8258495 ubiquitin-related modifier 1 homolog 2 K12161 URM1; ubiquitin related modifier 1
D 8287626 adenylyltransferase and sulfurtransferase MOCS3 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D 8275421 EKC/KEOPS complex subunit TP53RK K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 8270606 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 8261707 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 8266441 EKC/KEOPS complex subunit TPRKB K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 8268173 uncharacterized protein LOC8268173 isoform X2 K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
C Elongator complex
D 8265976 elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 8275087 elongator complex protein 2 isoform X2 K11374 ELP2; elongator complex protein 2
D 8266368 elongator complex protein 3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D 8276146 elongator complex protein 4 isoform X2 K11375 ELP4; elongator complex protein 4
D 8270562 elongator complex protein 5 K11376 ELP5; elongator complex protein 5
D 8264791 elongator complex protein 6 isoform X1 K11377 ELP6; elongator complex protein 6
C Elongator related proteins
D 8275538 diphthamide biosynthesis protein 3 K15455 DPH3; diphthamide biosynthesis protein 3
D 8264731 protein KTI12 homolog K15456 KTI12; protein KTI12
C Other tRNA modification factors
D 8264076 yrdC domain-containing protein, mitochondrial isoform X2 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 8287515 tRNA dimethylallyltransferase 9 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 8269651 tRNA dimethylallyltransferase 2 isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 8263029 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 8281224 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 8281696 queuine tRNA-ribosyltransferase catalytic subunit 1 K00777 QTRT1; queuine tRNA-ribosyltransferase catalytic subunit [EC:2.4.2.64]
D 8263228 queuine tRNA-ribosyltransferase accessory subunit 2-like isoform X1 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 8265141 uncharacterized protein LOC8265141 isoform X1 K15463 RIT1; tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]
D 8274336 ribosome quality control complex subunit 2 K06963 TAN1; tRNA acetyltransferase TAN1
D 8264047 tRNA(His) guanylyltransferase 1 isoform X1 K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D 8270472 arginyl-tRNA--protein transferase 2 isoform X2 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
B tRNA degradation factors
C TRAMP complex
D 8287533 LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4B K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 8262570 DExH-box ATP-dependent RNA helicase DExH9 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 8281906 DExH-box ATP-dependent RNA helicase DExH10 isoform X2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C Rapid tRNA decay (RTD) pathway factors
D 8274641 5'-3' exoribonuclease 3 isoform X4 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 8275373 putative PAP-specific phosphatase, mitochondrial isoform X1 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 8281743 PAP-specific phosphatase HAL2-like K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 8259399 PAP-specific phosphatase HAL2-like K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D 8265578 tRNase Z TRZ2, chloroplastic K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 8273812 tRNase Z TRZ3, mitochondrial isoform X1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 8277375 tRNase Z TRZ1 isoform X1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 8258890 ribonuclease II, chloroplastic/mitochondrial isoform X1 K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D 8281810 extracellular ribonuclease LE K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8285340 ribonuclease 3 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8281811 ribonuclease 3 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8285338 extracellular ribonuclease LE K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8288290 ribonuclease 2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 8288317 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 8277982 leucine--tRNA ligase, chloroplastic/mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 8263257 leucine--tRNA ligase, cytoplasmic isoform X1 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 8281880 leucine--tRNA ligase, cytoplasmic K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 8265873 proline--tRNA ligase, cytoplasmic K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 8277109 proline--tRNA ligase, chloroplastic/mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D 8273056 tyrosine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 8276040 tyrosine--tRNA ligase 1, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 8271168 tryptophan--tRNA ligase, chloroplastic/mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 8271146 tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 8275948 threonine--tRNA ligase, chloroplastic/mitochondrial 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 8274778 threonine--tRNA ligase, mitochondrial 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 8264293 isoleucine--tRNA ligase, cytoplasmic K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 8278725 isoleucine--tRNA ligase, chloroplastic/mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 8282170 lysine--tRNA ligase, chloroplastic/mitochondrial K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 8267814 lysine--tRNA ligase, cytoplasmic K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 8278144 alanine--tRNA ligase, chloroplastic/mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 8286134 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 8287230 valine--tRNA ligase, mitochondrial 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 8268115 valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 8265961 methionine--tRNA ligase, chloroplastic/mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 8264929 methionine--tRNA ligase, cytoplasmic isoform X1 K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 8280624 probable methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 8281685 serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 8285368 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 8280119 serine--tRNA ligase isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 8286112 LOW QUALITY PROTEIN: serine--tRNA ligase, chloroplastic/mitochondrial K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 8268901 aspartate--tRNA ligase, chloroplastic/mitochondrial K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 8277436 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 8261719 cysteine--tRNA ligase 2, cytoplasmic isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 8259417 cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 8260384 LOW QUALITY PROTEIN: cysteine--tRNA ligase 2, cytoplasmic-like K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 8275692 glutamate--tRNA ligase, chloroplastic/mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 8274977 glutamate--tRNA ligase, cytoplasmic K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 8260377 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 8265135 arginine--tRNA ligase, chloroplastic/mitochondrial isoform X2 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 8268601 arginine--tRNA ligase, cytoplasmic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 8271422 phenylalanine--tRNA ligase alpha subunit, cytoplasmic K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 8265580 phenylalanine--tRNA ligase, chloroplastic/mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 8265532 phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 8284485 histidine--tRNA ligase, chloroplastic/mitochondrial K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 8277157 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 8265104 asparagine--tRNA ligase, cytoplasmic 1 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 8266755 asparagine--tRNA ligase, cytoplasmic 2 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 8265545 asparagine--tRNA ligase, chloroplastic/mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D 8259182 D-aminoacyl-tRNA deacylase isoform X2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 8264581 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
B tRNA modification factors
C Deaminases
D 8264514 tRNA(adenine(34)) deaminase, chloroplastic K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D 8259319 tRNA-dihydrouridine(20/20a) synthase isoform X1 K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
C Methylthiotransferases
C Methyltransferases
D 8260637 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 8282029 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 8263029 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 8260766 putative tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D 8267915 tRNA (adenine(37)-N6)-methyltransferase isoform X1 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 8277492 uncharacterized tRNA/rRNA methyltransferase YsgA K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D 8267856 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 8263281 tRNA pseudouridine synthase A isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 8261356 tRNA pseudouridine synthase A 1 isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 8282758 putative tRNA pseudouridine synthase isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 8279098 uncharacterized protein LOC8279098 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 8289355 multisubstrate pseudouridine synthase 7 isoform X1 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D 8275935 cysteine desulfurase, mitochondrial K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D 8275421 EKC/KEOPS complex subunit TP53RK K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 8270606 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 8261707 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D 8281224 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 8287515 tRNA dimethylallyltransferase 9 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 8269651 tRNA dimethylallyltransferase 2 isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 8264076 yrdC domain-containing protein, mitochondrial isoform X2 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 8272196 tRNA threonylcarbamoyladenosine dehydratase isoform X1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
B tRNA degradation factors
C 8289820 polyribonucleotide nucleotidyltransferase 2, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 8286492 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024