+E Transcription factors KO #

  Transcription Factors - Mediterraneibacter gnavus

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D RGna_00255 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D RGna_00380 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D RGna_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family D RGna_14160 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D RGna_04945 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D RGna_09835 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D C LacI family D RGna_12260 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D RGna_13255 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D RGna_15185 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D RGna_00710 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D RGna_04585 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D RGna_10485 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D RGna_11325 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D RGna_14800 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D RGna_08550 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D RGna_16130 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D RGna_06785 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D RGna_16090 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D RGna_05430 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D RGna_06915 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D RGna_06920 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D RGna_17155 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D RGna_04665 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D RGna_01190 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D RGna_07435 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D RGna_10025 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D RGna_07355 TetR/AcrR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator C Lrp/AsnC family C LuxR family C MarR family D RGna_13800 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D RGna_08335 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator C Fur family D RGna_15615 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D RGna_16905 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family D RGna_15165 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D RGna_03450 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D RGna_07660 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D RGna_07585 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D RGna_04755 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D RGna_00990 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D RGna_10185 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D RGna_14845 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D RGna_11380 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D RGna_01690 ArsR family transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons C XRE family C PadR family D RGna_12370 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D RGna_06820 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D RGna_07515 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D RGna_16900 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D RGna_07800 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D RGna_02080 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D RGna_12860 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D RGna_14185 transcriptional regulator K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR D RGna_01620 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D RGna_09040 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D RGna_03230 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D RGna_07480 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D RGna_10705 PucR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D RGna_16220 molybdenum transporter K02019 modE; molybdate transport system regulatory protein D RGna_01465 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D RGna_15925 GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor D RGna_13790 transcriptional regulator K07727 K07727; putative transcriptional regulator D RGna_16250 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator D RGna_01135 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator D RGna_02460 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator D RGna_02635 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator D RGna_02655 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family D RGna_14465 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D RGna_07970 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D RGna_10650 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D RGna_04440 transcription antiterminator BglG K03480 glcT; transcriptional antiterminator D RGna_14550 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator C Others D RGna_05450 metal-sensitive transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D RGna_05930 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D RGna_13325 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RGna_13740 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RGna_15745 DUF3850 domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RGna_16955 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RGna_11500 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RGna_06110 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D RGna_04110 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D RGna_00760 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D RGna_07500 PspC domain-containing protein K03973 pspC; phage shock protein C D RGna_13670 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D RGna_05095 transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0