+D GENES KO
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KEGG Orthology (KO) - Candidatus Ruthia magnifica (Calyptogena magnifica)
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rma00010]
D Rmag_0884 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmag_0094 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rmag_0067 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rmag_1076 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rmag_0063 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rmag_0065 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Rmag_1070 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rmag_0351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmag_0066 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rmag_0458 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Rmag_0962 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_0456 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:rma00020]
D Rmag_1063 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rmag_0992 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Rmag_0423 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_0145 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rmag_0146 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rmag_0793 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Rmag_0458 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Rmag_0962 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rma00030]
D Rmag_0884 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmag_1071 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rmag_0062 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rmag_0227 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Rmag_0456 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rmag_0109 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rmag_0067 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rmag_0094 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rma00040]
D Rmag_0885 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rmag_1071 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:rma00051]
D Rmag_0898 glucose-1-phosphate adenylyltransferase related protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rmag_0456 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rmag_0903 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rmag_0902 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Rmag_0094 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rmag_0067 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rmag_1076 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:rma00052]
D Rmag_0885 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rmag_0456 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rmag_0094 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:rma00500]
D Rmag_0885 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rmag_0456 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rmag_0884 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rma00520]
D Rmag_0318 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rmag_0883 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rmag_0138 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Rmag_1030 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Rmag_0014 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Rmag_0488 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D Rmag_0468 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Rmag_0467 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Rmag_0600 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rmag_0758 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rmag_0456 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rmag_0885 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rmag_0884 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmag_0898 glucose-1-phosphate adenylyltransferase related protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rmag_0903 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rmag_0902 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Rmag_0764 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:rma00620]
D Rmag_0458 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Rmag_0962 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_0066 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rmag_0123 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rmag_1059 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rmag_1060 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rmag_1024 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rmag_0978 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Rmag_0819 Malate dehydrogenase (oxaloacetate-decarboxylating) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Rmag_0848 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Rmag_0847 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rmag_0849 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D Rmag_0793 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Rmag_0449 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rma00630]
D Rmag_0538 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D Rmag_1063 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rmag_0992 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Rmag_0313 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Rmag_0314 FAD/FMN-containing dehydrogenases-like protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Rmag_0315 protein of unknown function DUF224, cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Rmag_0117 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Rmag_0701 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rmag_0312 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rmag_0498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmag_0632 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rmag_0821 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rmag_0924 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_0923 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:rma00640]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_0123 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rmag_1059 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rmag_1060 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rmag_1024 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rmag_0146 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rmag_0145 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rmag_0992 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:rma00650]
D Rmag_0847 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rmag_0445 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmag_0446 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rma00660]
D Rmag_0445 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmag_0446 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rmag_0146 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rmag_0145 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rmag_0372 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rmag_0371 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rmag_0099 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rma00562]
D Rmag_0491 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rmag_1076 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rma00190]
D Rmag_0237 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Rmag_0238 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Rmag_0239 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Rmag_0240 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Rmag_0241 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Rmag_0242 NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Rmag_0243 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Rmag_0244 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Rmag_0245 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Rmag_0246 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Rmag_0247 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Rmag_0248 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Rmag_0249 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Rmag_0250 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Rmag_0011 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rmag_0010 Cytochrome b/b6, N-terminal domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Rmag_0009 ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Rmag_0030 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rmag_0037 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Rmag_0035 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Rmag_0034 Cytochrome-c oxidase K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Rmag_0036 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Rmag_0032 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rmag_0039 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Rmag_0040 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Rmag_0041 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Rmag_1047 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rmag_1045 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rmag_1046 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rmag_1048 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rmag_1044 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rmag_1051 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rmag_1049 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rmag_1050 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rmag_0356 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rma00680]
D Rmag_0632 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rmag_0312 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rmag_0351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmag_0067 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rmag_0094 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rmag_1070 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rmag_0627 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmag_0628 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rmag_0271 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rma00910]
D Rmag_0687 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Rmag_0498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmag_1018 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rmag_0871 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rmag_0988 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rma00920]
D Rmag_0085 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rmag_0107 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Rmag_0088 dissimilatory adenylylsulfate reductase alpha subunit precursor K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D Rmag_0087 dissimilatory adenylylsulfate reductase beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D Rmag_0805 diheme cytochrome SoxA (sulfur oxidation) K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Rmag_0808 monoheme cytochrome SoxX (sulfur oxidation) K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Rmag_0807 thiosulfate-binding protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D Rmag_0806 sulfur compound chelating protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Rmag_0156 sulfate thiol esterase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Rmag_0870 dissimilatory sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Rmag_0869 dissimilatory sulfite reductase beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Rmag_0862 4Fe-4S ferredoxin, iron-sulfur binding domain protein K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
D Rmag_0864 Nitrate reductase, gamma subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D Rmag_0863 protein of unknown function DUF224, cysteine-rich region domain protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D Rmag_0861 hypothetical protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D Rmag_0860 Twin-arginine translocation pathway signal K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D Rmag_0859 Polysulphide reductase, NrfD K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D Rmag_1053 sulfide-quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Rmag_0824 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Rmag_0579 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rmag_0018 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Rmag_1002 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rma00061]
D Rmag_0123 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rmag_1059 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rmag_1060 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rmag_1024 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rmag_0565 acyl carrier protein K02078 acpP; acyl carrier protein
D Rmag_0917 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rmag_0483 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rmag_1004 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Rmag_0566 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmag_0916 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmag_1003 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Rmag_0555 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rmag_0654 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rma00561]
D Rmag_0484 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rmag_0958 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rmag_0487 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rmag_0983 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:rma00564]
D Rmag_0934 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Rmag_0958 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rmag_0487 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rmag_0893 Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D Rmag_0983 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Rmag_0026 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Rmag_0448 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rmag_0349 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Rmag_0152 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Rmag_0267 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rma00230]
D Rmag_0101 NUDIX hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D Rmag_0456 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rmag_0109 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rmag_1001 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rmag_0057 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Rmag_0265 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rmag_0392 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Rmag_0266 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Rmag_0838 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Rmag_0837 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Rmag_0023 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Rmag_0991 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rmag_0969 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rmag_0670 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rmag_0910 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rmag_0462 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rmag_0381 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rmag_0228 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Rmag_0914 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rmag_0559 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Rmag_0523 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmag_0524 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rmag_0513 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rmag_0531 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rmag_1022 PfkB domain protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D Rmag_0093 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rmag_0669 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Rmag_0549 bis(5'nucleosyl)-tetraphosphatase, ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D Rmag_0085 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:rma00240]
D Rmag_0875 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rmag_0877 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rmag_0045 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rmag_0015 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Rmag_0006 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Rmag_0233 dihydroorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Rmag_0995 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Rmag_0432 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Rmag_0262 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Rmag_0381 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rmag_0674 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Rmag_0593 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Rmag_0670 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rmag_0910 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rmag_0523 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmag_0524 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rmag_0308 CMP/dCMP deaminase, zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Rmag_0220 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Rmag_0616 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Rmag_0825 nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rma00250]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0966 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rmag_0373 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rmag_0312 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rmag_0151 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rmag_0784 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rmag_0531 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rmag_0991 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rmag_0045 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rmag_1018 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rmag_0871 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rmag_0498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmag_0875 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rmag_0877 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rmag_0883 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rmag_1001 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rma00260]
D Rmag_0585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rmag_0951 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rmag_0769 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rmag_0770 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rmag_0632 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rmag_0312 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rmag_1070 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rmag_0627 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmag_0628 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rmag_0271 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Rmag_0821 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rmag_0924 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_0923 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Rmag_0448 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rmag_1025 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rmag_1031 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rma00270]
D Rmag_0579 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rmag_0985 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rmag_0738 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rmag_0739 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rmag_0585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rmag_0951 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rmag_0769 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rmag_0018 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Rmag_1002 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Rmag_0584 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmag_1015 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Rmag_0051 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0772 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Rmag_0627 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmag_0628 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rma00280]
D Rmag_0584 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rma00290]
D Rmag_0372 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rmag_0371 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rmag_0099 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Rmag_0445 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmag_0446 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rmag_0447 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rmag_0529 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rmag_0584 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmag_0449 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rma00300]
D Rmag_0769 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rmag_0585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rmag_0951 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rmag_0278 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rmag_0828 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Rmag_0074 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Rmag_0453 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rmag_0274 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rmag_0550 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rmag_0103 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Rmag_0155 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rmag_0153 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rma00310]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_0469 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:rma00220]
D Rmag_0452 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Rmag_0151 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rmag_0784 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rmag_0498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0528 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Rmag_0704 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Rmag_0232 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Rmag_1061 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Rmag_0453 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rma00330]
D Rmag_0116 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Rmag_0413 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Rmag_0133 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0469 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:rma00340]
D Rmag_0601 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Rmag_0532 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Rmag_0288 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Rmag_0289 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Rmag_0977 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Rmag_0949 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Rmag_0028 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Rmag_0950 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Rmag_0625 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0953 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0602 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:rma00350]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0625 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0953 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:rma00360]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0625 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0953 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0469 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rma00400]
D Rmag_0305 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rmag_0341 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Rmag_1058 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Rmag_0435 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rmag_0583 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Rmag_0623 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Rmag_0430 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Rmag_0809 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rmag_0931 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Rmag_0112 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Rmag_1032 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Rmag_0832 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Rmag_1025 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rmag_1031 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rmag_0626 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Rmag_0624 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0625 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0953 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rma00410]
D Rmag_0846 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Rmag_0416 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:rma00450]
D Rmag_0985 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rmag_0044 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Rmag_0085 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rmag_0570 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D Rmag_0632 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rma00470]
D Rmag_0668 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rmag_0469 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rmag_0759 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmag_0766 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rmag_0550 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rmag_0103 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rma00480]
D Rmag_1015 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Rmag_0051 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Rmag_0211 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rmag_0440 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Rmag_0325 Glutathione S-transferase, N-terminal domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rmag_0290 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D Rmag_0423 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rma00540]
D Rmag_0556 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Rmag_0444 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Rmag_0554 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Rmag_0921 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Rmag_0105 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Rmag_0843 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Rmag_0158 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Rmag_0831 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Rmag_1043 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Rmag_0900 putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Rmag_0841 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Rmag_0411 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Rmag_0580 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Rmag_0294 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Rmag_0937 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Rmag_0908 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rma00541]
D Rmag_0885 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rmag_0764 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Rmag_0898 glucose-1-phosphate adenylyltransferase related protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rmag_0903 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rmag_0902 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Rmag_1030 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Rmag_0886 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:rma00550]
D Rmag_0600 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rmag_0758 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rmag_0757 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rmag_0766 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rmag_0155 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rmag_0759 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmag_0153 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rmag_0027 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rmag_0439 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rmag_0309 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rmag_0500 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rmag_0797 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rmag_0296 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rmag_0470 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:rma00552]
D Rmag_0439 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rmag_0886 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D Rmag_0892 hypothetical protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rma00543]
D Rmag_0129 membrane bound O-acyl transferase, MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Rmag_0579 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rma00730]
D Rmag_0410 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Rmag_0954 Phosphomethylpyrimidine kinase type-1 K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Rmag_0577 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmag_0651 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Rmag_0386 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Rmag_0834 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Rmag_0082 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Rmag_0419 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Rmag_0589 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Rmag_0093 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rma00740]
D Rmag_0505 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rmag_0800 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rmag_0506 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Rmag_0504 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Rmag_0016 FMN adenylyltransferase / riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:rma00750]
D Rmag_0434 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Rmag_0684 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D Rmag_0628 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rmag_0546 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Rmag_0611 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Rmag_0770 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rma00760]
D Rmag_0966 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rmag_0395 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Rmag_0106 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Rmag_0670 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rmag_0910 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rmag_0327 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Rmag_0520 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Rmag_0441 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Rmag_1054 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:rma00770]
D Rmag_0445 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmag_0446 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rmag_0447 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rmag_0529 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rmag_0415 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Rmag_0416 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rmag_0337 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Rmag_0801 Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Rmag_0354 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Rmag_0061 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Rmag_0610 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Rmag_0584 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmag_0846 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:rma00780]
D Rmag_0257 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Rmag_1004 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Rmag_0566 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmag_0916 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmag_0555 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rmag_0654 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rmag_0836 carboxylesterase BioH (pimeloyl-CoA synthesis) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D Rmag_0835 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Rmag_0118 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Rmag_0007 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Rmag_0499 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Rmag_0982 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rma00785]
D Rmag_0542 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Rmag_0543 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_0458 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Rmag_0962 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmag_0821 glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rmag_0924 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rmag_0923 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rma00790]
D Rmag_0304 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D Rmag_0957 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Rmag_0414 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Rmag_0956 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Rmag_0137 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Rmag_1019 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Rmag_0999 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Rmag_0505 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rmag_0518 Anthranilate synthase K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D Rmag_0218 aminodeoxychorismate lyase apoprotein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Rmag_0303 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rmag_0437 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D Rmag_0427 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Rmag_0564 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Rmag_0479 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Rmag_0693 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rmag_0692 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rmag_0689 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Rmag_0698 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rmag_0691 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Rmag_0690 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rma00670]
D Rmag_1019 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Rmag_0840 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Rmag_0632 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rmag_0265 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rmag_0969 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rmag_0785 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rmag_0924 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rmag_0616 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Rmag_0851 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Rmag_0971 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rma00860]
D Rmag_0474 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmag_0730 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Rmag_0222 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Rmag_0409 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rmag_0783 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Rmag_0853 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Rmag_1026 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Rmag_0496 coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Rmag_0774 conserved hypothetical protein 701 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Rmag_0522 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Rmag_0270 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D Rmag_0030 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rmag_0032 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rmag_0858 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rma00130]
D Rmag_0929 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D Rmag_0073 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Rmag_0972 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D Rmag_0608 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Rmag_1064 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rma00900]
D Rmag_0386 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Rmag_0025 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Rmag_0755 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Rmag_0110 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Rmag_0756 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Rmag_0384 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Rmag_1023 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Rmag_0482 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rmag_0366 Dimethylallyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Rmag_0027 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rmag_0587 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Rmag_0062 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:rma00332]
D Rmag_0413 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Rmag_0133 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rma00261]
D Rmag_0085 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rmag_0585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rmag_0951 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rmag_0278 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rmag_0828 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rma00521]
D Rmag_0456 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rmag_0491 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:rma00401]
D Rmag_0624 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0625 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0953 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Rmag_0809 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rmag_0931 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Rmag_0917 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rmag_0916 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmag_0654 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Rmag_0565 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rma00999]
D Rmag_0738 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rmag_0435 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D Rmag_0847 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D Rmag_0870 dissimilatory sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Rmag_0869 dissimilatory sulfite reductase beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Rmag_0862 4Fe-4S ferredoxin, iron-sulfur binding domain protein K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rma03020]
D Rmag_0811 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rmag_0810 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rmag_0190 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rmag_0405 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rma03010]
D Rmag_0592 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Rmag_1072 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Rmag_0171 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Rmag_0189 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Rmag_0182 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Rmag_0664 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Rmag_0161 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Rmag_0179 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Rmag_0935 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Rmag_0164 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Rmag_0188 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Rmag_0160 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Rmag_0187 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Rmag_0178 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Rmag_0293 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Rmag_0990 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Rmag_0174 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Rmag_0665 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Rmag_0169 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Rmag_0749 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Rmag_0192 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Rmag_0814 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Rmag_0168 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Rmag_0165 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Rmag_0166 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Rmag_0177 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Rmag_0180 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Rmag_0812 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rmag_0666 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Rmag_0813 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Rmag_0815 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Rmag_0936 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Rmag_0175 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Rmag_0184 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Rmag_0172 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Rmag_0191 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Rmag_0181 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Rmag_0872 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Rmag_0645 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Rmag_0919 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Rmag_0170 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Rmag_0167 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Rmag_0176 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Rmag_1067 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Rmag_0918 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Rmag_0994 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Rmag_0173 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Rmag_0183 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Rmag_1027 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Rmag_0485 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Rmag_0993 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Rmag_1037 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Rmag_0646 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Rmag_0186 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Rmag_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rmag_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rmag_R0036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rma00970]
D Rmag_R0038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmag_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmag_R0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmag_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmag_R0018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmag_R0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmag_R0017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rmag_R0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rmag_R0007 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rmag_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rmag_R0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rmag_R0012 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rmag_R0030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmag_R0008 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmag_R0014 tRNA-His K14226 tRNA-His; tRNA His
D Rmag_R0039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rmag_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmag_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmag_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmag_R0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmag_R0022 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rmag_R0004 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmag_R0003 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmag_R0005 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmag_R0002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rmag_R0016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmag_R0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmag_R0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmag_R0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmag_R0032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmag_R0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmag_R0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmag_R0028 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rmag_R0031 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rmag_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmag_R0019 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmag_0474 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmag_0344 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rmag_0345 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rmag_0343 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rmag_0909 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Rmag_0882 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rmag_0396 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rmag_0740 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rmag_0721 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rmag_0648 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rmag_1008 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rmag_0097 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rmag_0570 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rmag_0785 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rmag_0464 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rmag_0005 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rmag_0340 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rmag_0594 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Rmag_0079 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rmag_0348 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rmag_0671 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rmag_0643 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rmag_0642 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rmag_0132 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rmag_0338 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rma03060]
D Rmag_0185 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rmag_0817 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rmag_1075 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rmag_1006 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rmag_1005 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rmag_1007 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Rmag_1040 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmag_0013 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rmag_0604 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rmag_R0020 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Rmag_0781 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rmag_0287 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rmag_0286 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Rmag_0285 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Rmag_0621 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rmag_0652 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rma04122]
D Rmag_0577 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmag_0225 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Rmag_0497 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Rmag_0866 DsrH family protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Rmag_0867 DsrE family protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Rmag_0868 DsrE family protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Rmag_0622 DsrC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D Rmag_0747 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rmag_0880 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rmag_0689 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Rmag_0693 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rmag_0694 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein
D Rmag_0635 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Rmag_0692 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rmag_0698 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rmag_0879 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rma03018]
D Rmag_0768 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Rmag_0436 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rmag_0351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmag_0461 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rmag_0127 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Rmag_0530 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rmag_0942 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rmag_0477 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rmag_0353 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmag_0562 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmag_0480 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rma03030]
D Rmag_0404 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmag_0803 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmag_0466 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmag_0221 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmag_0134 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmag_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmag_0667 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rmag_0295 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rmag_0510 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmag_0374 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Rmag_0078 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmag_0280 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rma03410]
D Rmag_0947 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rmag_0683 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Rmag_0332 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rmag_0996 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rmag_0078 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmag_0649 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rmag_0280 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rma03420]
D Rmag_1021 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rmag_0263 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Rmag_0426 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Rmag_0598 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Rmag_0320 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmag_0078 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmag_0280 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rma03430]
D Rmag_0320 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmag_0946 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D Rmag_0750 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Rmag_0481 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Rmag_0649 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rmag_0510 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmag_0803 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmag_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmag_0466 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmag_0134 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmag_0221 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmag_0404 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmag_0280 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rma03440]
D Rmag_0649 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rmag_0510 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmag_0078 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmag_0928 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rmag_0803 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmag_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmag_0466 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmag_0134 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmag_0221 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmag_0404 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmag_0120 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rma03250]
D Rmag_0310 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rma02010]
D Rmag_0706 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rmag_0705 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rmag_0707 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Rmag_0599 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Rmag_0258 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Rmag_0732 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Rmag_0077 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Rmag_0844 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Rmag_0845 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rmag_0660 hypothetical protein K02196 ccmD; heme exporter protein D
D Rmag_0661 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D Rmag_0737 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D Rmag_0736 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Rmag_0478 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Rmag_0913 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Rmag_0981 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Rmag_0676 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rmag_0799 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Rmag_0255 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:rma03070]
D Rmag_1006 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rmag_1005 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rmag_0817 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rmag_1075 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rmag_0185 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rmag_1007 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Rmag_1040 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmag_0013 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rmag_0781 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rmag_0604 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rmag_0287 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rmag_0286 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Rmag_0285 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rma02020]
D Rmag_0032 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rmag_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rmag_1013 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Rmag_1012 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Rmag_0475 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Rmag_0498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmag_0011 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rmag_0010 Cytochrome b/b6, N-terminal domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Rmag_0009 ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Rmag_0039 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Rmag_0040 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Rmag_0041 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Rmag_0159 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Rmag_0011 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rma02024]
D Rmag_0809 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rmag_0931 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Rmag_0305 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rmag_0251 glycosyl hydrolase, BNR repeat-containing protein K20276 bapA; large repetitive protein
D Rmag_0800 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rmag_1040 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmag_0817 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rmag_1075 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rmag_0185 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rmag_1007 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Rmag_0013 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rmag_0781 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rmag_0604 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D Rmag_0108 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Rmag_0351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rma01501]
D Rmag_0317 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Rmag_0318 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rmag_0797 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rmag_0296 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rma01502]
D Rmag_0759 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmag_0668 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rmag_0153 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rmag_0309 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rmag_0500 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rma01503]
D Rmag_0937 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Rmag_0955 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Rmag_0310 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Rmag_0556 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rma01000]
C 01001 Protein kinases [BR:rma01001]
D Rmag_1013 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rma01009]
D Rmag_0739 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rmag_0493 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rmag_0271 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rma01002]
D Rmag_0652 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Rmag_0914 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rmag_1001 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rmag_1018 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rmag_0883 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rmag_0373 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rmag_0440 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Rmag_0568 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D Rmag_0777 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rmag_0778 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rmag_0211 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rmag_0274 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rmag_0398 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Rmag_0113 aminopeptidase P, Metallo peptidase, MEROPS family M24B K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Rmag_0136 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rmag_0587 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D Rmag_0399 peptidase M48, Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Rmag_0552 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Rmag_0470 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rmag_0205 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Rmag_0208 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rmag_0621 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rmag_0620 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rmag_0735 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D Rmag_0387 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Rmag_0973 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 K03592 pmbA; PmbA protein
D Rmag_0236 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 K03568 tldD; TldD protein
D Rmag_0533 protease FtsH subunit HflC K04087 hflC; modulator of FtsH protease HflC
D Rmag_0534 protease FtsH subunit HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rma01003]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rma01005]
D Rmag_0556 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Rmag_0105 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Rmag_0444 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Rmag_0554 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Rmag_0921 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Rmag_0843 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Rmag_0580 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Rmag_0294 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Rmag_0411 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Rmag_0937 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D Rmag_0831 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Rmag_0841 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Rmag_1043 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Rmag_0900 putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Rmag_0158 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Rmag_0908 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D Rmag_0887 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rma01011]
D Rmag_0600 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rmag_0758 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rmag_0757 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rmag_0766 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rmag_0155 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rmag_0759 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmag_0668 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rmag_0309 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rmag_0500 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rmag_0439 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rmag_0557 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Rmag_0797 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rmag_0296 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rmag_0470 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rmag_0047 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Rmag_0762 Lytic transglycosylase, catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Rmag_1042 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rma01004]
D Rmag_0917 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rmag_0483 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rmag_1004 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Rmag_0566 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmag_0916 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmag_1003 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Rmag_0555 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rmag_0654 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rmag_0484 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rmag_0958 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rmag_0487 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rma01006]
D Rmag_0482 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rmag_0366 Dimethylallyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Rmag_0027 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rmag_0765 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rmag_0073 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Rmag_0030 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rma01007]
D Rmag_0474 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmag_0909 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Rmag_0132 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rmag_0338 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rmag_0097 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rmag_0079 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rmag_0570 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rmag_0340 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rmag_0464 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rmag_0005 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rmag_0594 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Rmag_0396 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rmag_0671 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rmag_0740 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rmag_0721 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rmag_1008 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rmag_0348 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rmag_0648 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rmag_0882 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rmag_0643 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rmag_0642 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rmag_0425 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmag_0020 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D Rmag_0625 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0953 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmag_0835 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Rmag_0453 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rmag_0118 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Rmag_0222 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Rmag_0469 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rmag_0584 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmag_0312 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rmag_0628 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rma00194]
D Rmag_1044 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rmag_1045 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rmag_1046 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rmag_1047 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rmag_1048 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rmag_1049 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rmag_1050 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rmag_1051 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rma03000]
D Rmag_0986 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D Rmag_0733 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rmag_0578 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Rmag_0982 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Rmag_0968 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Rmag_0763 transcriptional regulator, BolA protein family K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Rmag_0420 transcriptional regulator TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rmag_0631 Ribonucleotide reductase regulator NrdR-like protein K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:rma03021]
D Rmag_0190 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rmag_0811 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rmag_0810 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rmag_0405 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Rmag_0108 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Rmag_0560 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D Rmag_0053 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rmag_0507 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rmag_0816 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Rmag_0008 Glutathione S-transferase, N-terminal domain K03599 sspA; stringent starvation protein A
D Rmag_0457 positive regulator of sigma(E), RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Rmag_0420 transcriptional regulator TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rmag_0874 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Rmag_0477 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rma03019]
D Rmag_0436 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rmag_0614 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rmag_0530 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rmag_0111 Exonuclease, RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Rmag_0127 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Rmag_0942 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rmag_0351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmag_0461 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rmag_0477 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rmag_0353 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmag_0562 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmag_0480 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Rmag_0768 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
C 03041 Spliceosome
C 03011 Ribosome [BR:rma03011]
D Rmag_0592 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Rmag_1072 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Rmag_0171 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Rmag_0189 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Rmag_0182 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Rmag_0664 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Rmag_0161 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Rmag_0179 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Rmag_0935 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Rmag_0164 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Rmag_0188 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Rmag_0160 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Rmag_0187 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Rmag_0178 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Rmag_0293 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Rmag_0990 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Rmag_0174 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Rmag_0665 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Rmag_0169 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Rmag_0749 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Rmag_0192 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Rmag_0814 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Rmag_0168 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Rmag_0165 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Rmag_0166 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Rmag_0177 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Rmag_0180 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Rmag_0666 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Rmag_0813 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Rmag_0815 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Rmag_0812 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rmag_0936 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Rmag_0175 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Rmag_0184 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Rmag_0172 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Rmag_0191 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Rmag_0181 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Rmag_0872 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Rmag_0645 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Rmag_0919 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Rmag_0170 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Rmag_0167 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Rmag_0176 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Rmag_0918 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Rmag_0994 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Rmag_0173 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Rmag_0183 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Rmag_1027 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Rmag_0485 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Rmag_0993 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Rmag_1037 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Rmag_0646 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Rmag_0186 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Rmag_1067 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Rmag_R0036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rmag_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rmag_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rma03009]
D Rmag_0614 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rmag_0111 Exonuclease, RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Rmag_0613 GTP-binding protein Era K03595 era; GTPase
D Rmag_0412 small GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D Rmag_0420 transcriptional regulator TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rmag_0053 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rmag_0507 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rmag_0816 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Rmag_0547 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Rmag_0209 16S rRNA m(5)C-967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Rmag_0388 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Rmag_0355 16S rRNA m(2)G-966 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Rmag_0069 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rmag_0298 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Rmag_0059 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Rmag_0537 23S rRNA Gm-2251 2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Rmag_0367 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Rmag_0382 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Rmag_0339 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Rmag_0072 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Rmag_0329 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Rmag_0989 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Rmag_0436 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rmag_0046 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Rmag_0942 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rmag_0589 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Rmag_0673 small GTP-binding protein K03977 engA; GTPase
D Rmag_0207 GTP-binding protein HflX K03665 hflX; GTPase
D Rmag_0495 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rmag_0513 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rmag_0055 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Rmag_0052 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Rmag_0326 iojap-like protein K09710 ybeB; ribosome-associated protein
D Rmag_0121 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Rmag_0104 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein
D Rmag_0454 SSU ribosomal protein S30P / sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D Rmag_1069 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Rmag_0486 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rma03016]
D Rmag_0197 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Rmag_0474 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmag_0348 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rmag_0340 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rmag_0005 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rmag_0570 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rmag_0909 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Rmag_0079 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rmag_0594 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Rmag_0396 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rmag_0882 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rmag_0648 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rmag_1008 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rmag_0097 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rmag_0464 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rmag_0671 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rmag_0643 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rmag_0642 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rmag_0132 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rmag_0338 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rmag_0822 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rmag_0997 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Rmag_0984 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Rmag_0056 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Rmag_0577 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmag_0495 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rmag_0765 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rmag_1014 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Rmag_0068 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Rmag_0107 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Rmag_1038 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Rmag_R0027 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Rmag_0527 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D Rmag_0922 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D Rmag_0740 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rmag_0721 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rmag_0915 CMP/dCMP deaminase, zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Rmag_0442 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Rmag_0743 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Rmag_0930 putative methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D Rmag_0259 methyltransferase, putative K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D Rmag_0275 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Rmag_0492 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D Rmag_0786 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Rmag_0747 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rmag_0880 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rmag_0581 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Rmag_0225 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Rmag_0497 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Rmag_0866 DsrH family protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Rmag_0867 DsrE family protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Rmag_0868 DsrE family protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Rmag_0622 DsrC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D Rmag_0575 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D Rmag_0564 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Rmag_0303 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rmag_0427 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Rmag_0479 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Rmag_0122 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Rmag_0662 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Rmag_0980 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Rmag_0856 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Rmag_0530 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rmag_0461 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rma03012]
D Rmag_0054 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Rmag_0647 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Rmag_1073 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Rmag_0163 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rmag_0818 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rmag_0162 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Rmag_0731 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D Rmag_0261 ribosome recycling factor K02838 frr; ribosome recycling factor
D Rmag_0790 [protein release factor]-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Rmag_1068 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Rmag_0850 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D Rmag_0147 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D Rmag_0148 tRNA synthetase, class II (D, K and N) K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D Rmag_0322 L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D Rmag_0292 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D Rmag_0307 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:rma03110]
D Rmag_0911 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Rmag_0787 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Rmag_0206 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Rmag_0493 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rmag_0353 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmag_0573 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D Rmag_0562 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmag_0352 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rmag_0574 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D Rmag_1055 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Rmag_0428 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rmag_0561 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rmag_0136 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rmag_1051 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rmag_0745 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D Rmag_0310 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Rmag_0920 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Rmag_0656 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Rmag_0021 peptidylprolyl isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D Rmag_0090 putative peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Rmag_0536 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Rmag_0476 thioredoxin K03671 TXN; thioredoxin
D Rmag_0716 thioredoxin K03671 TXN; thioredoxin
D Rmag_0933 glutaredoxin K03676 grxC; glutaredoxin 3
D Rmag_0389 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Rmag_0955 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Rmag_0210 thiol-disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Rmag_1057 Protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:rma04131]
D Rmag_0381 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rmag_0063 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rmag_0066 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rmag_0493 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:rma04121]
C 03051 Proteasome [BR:rma03051]
D Rmag_0493 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rma03032]
D Rmag_0374 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Rmag_0380 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rmag_0641 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Rmag_0591 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Rmag_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rmag_0667 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rmag_0295 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rmag_0510 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmag_0803 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmag_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmag_0134 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmag_0221 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmag_0404 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmag_0466 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmag_0078 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmag_0280 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rmag_0268 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein
D Rmag_0306 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rmag_0003 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rmag_0302 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rmag_0563 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rmag_1034 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rma03036]
D Rmag_0614 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rmag_0380 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rmag_0641 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Rmag_0591 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Rmag_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rmag_0968 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Rmag_0443 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rmag_0754 cell division protein FtsB K05589 ftsB; cell division protein FtsB
D Rmag_0296 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rmag_0043 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Rmag_0760 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D Rmag_0501 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW
D Rmag_0794 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rmag_0795 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Rmag_0796 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Rmag_0471 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA
D Rmag_0302 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rmag_0563 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rmag_0068 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Rmag_0069 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rmag_0571 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rmag_0200 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rma03400]
D Rmag_0683 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Rmag_0947 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rmag_1016 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Rmag_0332 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rmag_0996 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rmag_0649 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rmag_0280 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rmag_0078 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmag_0263 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Rmag_0426 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Rmag_0598 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Rmag_0320 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmag_0811 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rmag_0810 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rmag_0190 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rmag_0405 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Rmag_1021 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rmag_0946 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D Rmag_0750 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Rmag_0481 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Rmag_0803 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmag_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmag_0134 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmag_0221 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmag_0404 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmag_0466 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmag_0510 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmag_0120 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Rmag_0928 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rmag_0306 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rmag_0003 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rmag_1034 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Rmag_0380 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rmag_0968 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Rmag_0641 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Rmag_0591 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Rmag_0365 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Rmag_0523 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmag_0524 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rma03029]
D Rmag_0010 Cytochrome b/b6, N-terminal domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Rmag_0054 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Rmag_0647 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Rmag_1073 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Rmag_0163 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rmag_0818 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rmag_0162 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Rmag_0613 GTP-binding protein Era K03595 era; GTPase
D Rmag_0132 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rmag_0005 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rmag_0396 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rmag_0079 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rmag_0344 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rmag_0345 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rmag_0343 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rmag_0510 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmag_0553 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Rmag_0353 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmag_1055 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Rmag_0562 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmag_0561 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rmag_0352 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rmag_0577 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmag_0574 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D Rmag_0389 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Rmag_0571 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rmag_0030 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rmag_0036 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Rmag_0032 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rmag_1040 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmag_0038 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D Rmag_0744 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Rmag_0493 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rma02000]
D Rmag_0676 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rmag_0799 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Rmag_0255 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Rmag_0596 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein
D Rmag_0706 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rmag_0705 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rmag_0707 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Rmag_0599 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Rmag_0258 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Rmag_0732 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Rmag_0077 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Rmag_0478 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Rmag_0913 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Rmag_0981 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Rmag_0844 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Rmag_0845 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rmag_0660 hypothetical protein K02196 ccmD; heme exporter protein D
D Rmag_0661 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D Rmag_0737 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D Rmag_0736 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Rmag_0960 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rmag_0961 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rmag_0687 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Rmag_0317 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Rmag_0277 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Rmag_0325 Glutathione S-transferase, N-terminal domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rmag_0008 Glutathione S-transferase, N-terminal domain K03599 sspA; stringent starvation protein A
D Rmag_0767 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease
D Rmag_0742 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein
D Rmag_0455 magnesium transporter K06213 mgtE; magnesium transporter
D Rmag_0725 Cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D Rmag_0724 Cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR
D Rmag_0050 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D Rmag_0350 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rmag_0253 outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D Rmag_0553 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Rmag_0279 NlpBDapX lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D Rmag_0512 putative transmembrane protein K05807 bamD; outer membrane protein assembly factor BamD
D Rmag_0734 SmpA/OmlA domain protein K06186 bamE; outer membrane protein assembly factor BamE
D Rmag_0084 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D Rmag_0535 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D Rmag_0135 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D Rmag_0975 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein
D Rmag_0855 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Rmag_0364 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D Rmag_0363 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Rmag_0773 Cl-channel, voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Rmag_0557 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Rmag_0519 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Rmag_0501 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW
D Rmag_0516 OmpA/MotB domain protein K03640 pal; peptidoglycan-associated lipoprotein
D Rmag_0723 Cell division and transport-associated protein TolA K03646 tolA; colicin import membrane protein
D Rmag_0515 TolB, N-terminal domain protein K03641 tolB; TolB protein
D Rmag_0092 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Rmag_0847 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rmag_0848 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Rmag_0849 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D Rmag_0256 secretion protein HlyD family protein K12542 lapC; membrane fusion protein, adhesin transport system
D Rmag_0272 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:rma02044]
D Rmag_0255 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Rmag_0256 secretion protein HlyD family protein K12542 lapC; membrane fusion protein, adhesin transport system
D Rmag_0253 outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D Rmag_0308 CMP/dCMP deaminase, zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Rmag_0210 thiol-disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Rmag_0013 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rmag_1006 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rmag_0817 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rmag_1005 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rmag_1075 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rmag_0185 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rmag_0604 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rmag_0781 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rmag_1007 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Rmag_1040 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmag_0287 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rmag_0286 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D Rmag_0285 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rma02042]
D Rmag_0350 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rma02022]
D Rmag_1013 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Rmag_1012 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Rmag_0284 response regulator receiver and ANTAR domain protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rma04812]
D Rmag_0794 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rmag_0443 cell division protein FtsA K03590 ftsA; cell division protein FtsA
C 04147 Exosome [BR:rma04147]
D Rmag_0493 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rmag_0351 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmag_0063 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rmag_0065 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Rmag_0066 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rmag_0310 Peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Rmag_0098 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Rmag_0562 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmag_0353 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmag_0884 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmag_0462 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rmag_0163 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rmag_0818 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rmag_0822 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rmag_0739 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rmag_0093 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rmag_0784 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rmag_0151 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rmag_0498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmag_0409 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rmag_0627 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmag_0969 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rmag_0587 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D Rmag_0963 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmag_1076 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rma02048]
D Rmag_0794 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rmag_0302 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rmag_0563 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rmag_0474 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmag_0577 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rma04090]
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rma00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rma03100]
D Rmag_R0038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmag_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmag_R0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmag_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmag_R0018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmag_R0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmag_R0017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rmag_R0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rmag_R0007 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rmag_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rmag_R0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rmag_R0012 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rmag_R0030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmag_R0008 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmag_R0014 tRNA-His K14226 tRNA-His; tRNA His
D Rmag_R0039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rmag_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmag_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmag_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmag_R0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmag_R0022 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rmag_R0004 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmag_R0003 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmag_R0005 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmag_R0002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rmag_R0016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmag_R0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmag_R0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmag_R0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmag_R0032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmag_R0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmag_R0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmag_R0028 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rmag_R0031 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rmag_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmag_R0019 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmag_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rmag_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rmag_R0036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rmag_R0020 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Rmag_R0027 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Rmag_0636 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Rmag_0196 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Rmag_0607 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Rmag_0324 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Rmag_0964 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Rmag_0617 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Rmag_0948 fructosamine kinase K15523 FN3KRP; protein-ribulosamine 3-kinase [EC:2.7.1.172]
D Rmag_0048 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Rmag_0346 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D Rmag_0071 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Rmag_0967 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Rmag_1020 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D Rmag_0142 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Rmag_0141 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Rmag_0140 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Rmag_1028 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D Rmag_0572 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D Rmag_0525 ferredoxin K11107 yfaE; ferredoxin
D Rmag_0143 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Rmag_0788 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Rmag_0139 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Rmag_0576 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D Rmag_0699 von Willebrand factor, type A K02448 norD; nitric oxide reductase NorD protein
D Rmag_0700 CbbQ/NirQ/NorQ C-terminal domain protein K04748 norQ; nitric oxide reductase NorQ protein
D Rmag_0865 DsrC family protein K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Rmag_0234 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Rmag_0907 glycosyl transferase, family 25 K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D Rmag_1066 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Rmag_0944 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Rmag_0680 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rmag_0276 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Rmag_0281 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
C 99975 Protein processing
D Rmag_0912 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Rmag_0204 trigger factor K03545 tig; trigger factor
D Rmag_0379 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Rmag_0833 OsmC family protein K07397 yhfA; putative redox protein
D Rmag_0417 nitrogen-fixing NifU domain protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D Rmag_0489 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
C 99979 Viral proteins
C 99998 Others
D Rmag_1009 Rhodanese domain protein K03972 pspE; phage shock protein E
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Rmag_0125 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D Rmag_0925 Intracellular septation protein A K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D Rmag_0368 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Rmag_0463 SH3, type 3 domain protein K07184 ygiM; SH3 domain protein
C 99992 Structural proteins
D Rmag_0042 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D Rmag_0876 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Rmag_0644 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D Rmag_0659 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D Rmag_0273 TPR repeat-containing protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D Rmag_0595 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D Rmag_0548 ApaG domain protein K06195 apaG; ApaG protein
D Rmag_0712 imelysin, Metallo peptidase, MEROPS family M75 K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Rmag_1062 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D Rmag_0998 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D Rmag_0748 protein of unknown function DUF489 K07153 hflD; high frequency lysogenization protein
D Rmag_0400 LemA family protein K03744 lemA; LemA protein
D Rmag_1035 protein of unknown function DUF494 K03747 smg; Smg protein
C 99997 Function unknown
D Rmag_0926 hypothetical protein K06950 K06950; uncharacterized protein
D Rmag_0965 putative integral membrane protein K07003 K07003; uncharacterized protein
D Rmag_0149 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Rmag_0473 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Rmag_1039 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Rmag_0541 protein of unknown function DUF493 K09158 K09158; uncharacterized protein
D Rmag_0842 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D Rmag_0974 conserved hypothetical protein K09792 K09792; uncharacterized protein
D Rmag_0976 protein of unknown function UPF0125 K09801 K09801; uncharacterized protein
D Rmag_0385 conserved hypothetical protein K09928 K09928; uncharacterized protein
D Rmag_0124 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 28, 2024