+D GENES KO #

  KEGG Orthology (KO) - Rickettsia massiliae AZT80

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:rmi00010] D RMB_04620 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D RMB_06410 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D RMB_06405 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D RMB_04515 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00020 Citrate cycle (TCA cycle) [PATH:rmi00020] D RMB_06985 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D RMB_01755 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D RMB_06380 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D RMB_01310 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D RMB_01305 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_05045 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D RMB_05040 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D RMB_00985 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D RMB_00085 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D RMB_00975 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D RMB_00980 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D RMB_02895 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D RMB_05435 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D RMB_06410 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D RMB_06405 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D RMB_04515 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:rmi00030] D RMB_06075 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D RMB_00530 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] C 00040 Pentose and glucuronate interconversions D RMB_01865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00051 Fructose and mannose metabolism [PATH:rmi00051] D RMB_04725 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D RMB_06075 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism D RMB_05780 putative nucleoside-diphosphate sugar epimerase CapD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] C 00053 Ascorbate and aldarate metabolism D RMB_01865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:rmi00500] D RMB_02475 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rmi00520] D RMB_04330 UDP-N-acetylglucosamine pyrophosphorylase K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] D RMB_03555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D RMB_06480 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D RMB_05775 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D RMB_01865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D RMB_05780 putative nucleoside-diphosphate sugar epimerase CapD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] D RMB_04725 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00620 Pyruvate metabolism [PATH:rmi00620] D RMB_06410 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D RMB_06405 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D RMB_04515 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_05490 bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D RMB_05435 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D RMB_02895 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D RMB_04620 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rmi00630] D RMB_05435 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D RMB_06985 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D RMB_01755 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D RMB_03185 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D RMB_03180 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D RMB_04665 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D RMB_02170 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:rmi00640] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_03185 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D RMB_03180 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D RMB_05040 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D RMB_05045 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:rmi00650] D RMB_02215 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D RMB_00985 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D RMB_00085 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D RMB_00975 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D RMB_00980 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D RMB_03440 succinyl-CoA:3-ketoacid-coenzyme A transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D RMB_03435 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] C 00660 C5-Branched dibasic acid metabolism D RMB_05040 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D RMB_05045 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:rmi00562] D RMB_06540 extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:rmi00190] D RMB_05605 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D RMB_05610 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D RMB_05615 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D RMB_05620 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D RMB_05630 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D RMB_00915 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D RMB_01765 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D RMB_01770 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D RMB_01775 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D RMB_01805 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D RMB_01800 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D RMB_01795 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D RMB_01790 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D RMB_03965 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D RMB_00985 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D RMB_00085 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D RMB_00975 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D RMB_00980 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D RMB_06355 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D RMB_06350 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D RMB_06340 cytochrome c1, heme protein precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D RMB_05705 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D RMB_01380 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D RMB_05245 cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D RMB_05235 cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D RMB_06040 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D RMB_06430 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D RMB_01580 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D RMB_01585 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D RMB_06455 cytochrome c K08738 CYC; cytochrome c D RMB_01735 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D RMB_01745 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D RMB_01740 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D RMB_01730 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D RMB_01750 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D RMB_00345 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D RMB_00330 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D RMB_00335 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D RMB_00340 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D RMB_03485 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:rmi00680] D RMB_02170 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D RMB_05435 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00910 Nitrogen metabolism [PATH:rmi00910] D RMB_02040 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D RMB_04665 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism D RMB_06085 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:rmi00061] D RMB_01990 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D RMB_02305 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D RMB_01925 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D RMB_01985 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D RMB_01995 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D RMB_00780 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D RMB_05565 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D RMB_03170 acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism D RMB_04165 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:rmi00564] D RMB_04955 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D RMB_04165 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D RMB_06790 phospholipase D superfamily protein PLD K17717 pld; phospholipase D [EC:3.1.4.4] D RMB_03170 acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D RMB_05085 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D RMB_06525 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D RMB_06530 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D RMB_02105 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D RMB_00055 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D RMB_06790 phospholipase D superfamily protein PLD K17717 pld; phospholipase D [EC:3.1.4.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:rmi01040] D RMB_00140 Acyl-CoA desaturase 1 K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:rmi00230] D RMB_00530 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D RMB_01610 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D RMB_04660 putative cytoplasmic protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D RMB_00750 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D RMB_01955 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D RMB_04785 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D RMB_04760 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D RMB_00680 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D RMB_06225 guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D RMB_03530 guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D RMB_06125 guanosine pentaphosphate phosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D RMB_03025 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:rmi00240] D RMB_01120 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D RMB_00750 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D RMB_06765 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D RMB_05415 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D RMB_04435 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D RMB_00650 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D RMB_04785 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D RMB_04760 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D RMB_02670 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D RMB_05285 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D RMB_06055 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:rmi00250] D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D RMB_02040 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D RMB_04665 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00260 Glycine, serine and threonine metabolism [PATH:rmi00260] D RMB_02090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D RMB_05945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D RMB_02170 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D RMB_06965 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_06525 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:rmi00270] D RMB_04660 putative cytoplasmic protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D RMB_02090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D RMB_05945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D RMB_05065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D RMB_05435 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:rmi00280] D RMB_05065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_03185 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D RMB_03180 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D RMB_03440 succinyl-CoA:3-ketoacid-coenzyme A transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D RMB_03435 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rmi00290] D RMB_05065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:rmi00300] D RMB_02090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D RMB_05945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D RMB_05060 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D RMB_01080 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D RMB_01395 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D RMB_07180 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D RMB_05135 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D RMB_03405 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D RMB_03410 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:rmi00310] D RMB_01305 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:rmi00220] D RMB_04665 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D RMB_02040 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D RMB_00825 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] C 00330 Arginine and proline metabolism D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D RMB_01305 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rmi00400] D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism D RMB_02040 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism D RMB_07210 beta-lactamase superfamily hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:rmi00450] D RMB_04840 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D RMB_04935 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D RMB_02675 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:rmi00460] D RMB_02475 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D RMB_02170 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:rmi00470] D RMB_00525 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D RMB_06475 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D RMB_05210 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D RMB_05135 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:rmi00480] D RMB_01055 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D RMB_04615 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D RMB_06380 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:rmi00540] D RMB_00775 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D RMB_06445 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D RMB_00785 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D RMB_02335 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D RMB_05870 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D RMB_02450 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D RMB_04705 KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D RMB_00715 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D RMB_05410 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D RMB_00570 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D RMB_02455 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rmi00541] D RMB_05780 putative nucleoside-diphosphate sugar epimerase CapD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] D RMB_01865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D RMB_05785 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D RMB_04725 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D RMB_05775 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:rmi00550] D RMB_03555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D RMB_06480 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D RMB_06485 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D RMB_05210 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D RMB_03405 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D RMB_06475 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D RMB_03410 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D RMB_05080 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D RMB_03415 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D RMB_05200 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D RMB_01700 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D RMB_03690 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D RMB_03675 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D RMB_05335 penicillin-binding protein dacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:rmi00552] D RMB_02635 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:rmi00730] D RMB_04050 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_04055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_03025 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:rmi00740] D RMB_05230 glycerol-3-phosphate cytidyltransferase TagD K14656 ribL; FAD synthetase [EC:2.7.7.2] D RMB_03940 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:rmi00760] D RMB_04965 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D RMB_07255 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D RMB_07260 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D RMB_00625 NAD(p) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:rmi00770] D RMB_02330 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D RMB_03565 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D RMB_05065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:rmi00780] D RMB_01985 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D RMB_01995 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D RMB_00780 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D RMB_05565 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D RMB_04585 biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:rmi00785] D RMB_07125 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D RMB_02175 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_06410 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D RMB_06405 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D RMB_04515 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D RMB_01310 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D RMB_01305 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis [PATH:rmi00790] D RMB_05390 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D RMB_00400 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D RMB_04600 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D RMB_01295 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D RMB_06570 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D RMB_03310 organic radical activating protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D RMB_02565 trans-regulatory protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D RMB_00635 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:rmi00670] D RMB_04845 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D RMB_02170 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D RMB_01515 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D RMB_06055 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D RMB_04260 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:rmi00860] D RMB_06965 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D RMB_03150 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_05835 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_03955 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D RMB_04195 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D RMB_07350 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D RMB_07325 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D RMB_07340 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D RMB_07345 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D RMB_05705 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D RMB_06430 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rmi00130] D RMB_02660 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D RMB_06805 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D RMB_03940 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D RMB_03155 bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D RMB_03715 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D RMB_02745 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D RMB_01375 ubiquinone biosynthesis protein coq7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:rmi00900] D RMB_03940 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D RMB_04410 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D RMB_04090 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D RMB_05080 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D RMB_05785 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:rmi00946] D RMB_02475 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:rmi00261] D RMB_02090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D RMB_05945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D RMB_05060 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D RMB_01080 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:rmi00521] D RMB_06540 extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D RMB_05785 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D RMB_02305 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D RMB_01995 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D RMB_05565 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D RMB_01990 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D RMB_02475 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D RMB_05300 protocatechuate-3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00627 Aminobenzoate degradation D RMB_03940 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation D RMB_05300 protocatechuate-3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:rmi03020] D RMB_01040 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D RMB_01045 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D RMB_03040 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D RMB_03560 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:rmi03010] D RMB_04430 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D RMB_00585 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D RMB_02950 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D RMB_05710 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D RMB_03005 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D RMB_00120 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D RMB_01000 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D RMB_02990 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D RMB_06585 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D RMB_02915 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D RMB_03035 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D RMB_00995 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D RMB_03030 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D RMB_02985 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D RMB_04695 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D RMB_07115 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D RMB_02965 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D RMB_00115 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D RMB_02940 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D RMB_03050 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D RMB_03230 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D RMB_01025 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D RMB_02935 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D RMB_02920 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D RMB_02925 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D RMB_02980 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D RMB_02995 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D RMB_01035 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D RMB_00110 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D RMB_01030 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D RMB_01020 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D RMB_06590 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D RMB_02970 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D RMB_03015 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D RMB_02955 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D RMB_03045 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D RMB_03000 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D RMB_00900 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D RMB_03300 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D RMB_02100 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D RMB_02945 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D RMB_02930 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D RMB_02975 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D RMB_03325 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D RMB_02095 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D RMB_00810 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D RMB_02960 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D RMB_03010 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D RMB_00815 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D RMB_01920 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D RMB_07110 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D RMB_03295 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D RMB_03305 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D RMB_04320 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D RMB_r07425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D RMB_r07427 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D RMB_r07423 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:rmi00970] D RMB_t07399 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D RMB_t07387 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D RMB_t07393 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RMB_t07417 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RMB_t07389 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RMB_t07411 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D RMB_t07403 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D RMB_t07409 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D RMB_t07391 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D RMB_t07357 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D RMB_t07383 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D RMB_t07379 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D RMB_t07373 tRNA-His K14226 tRNA-His; tRNA His D RMB_t07405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D RMB_t07385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RMB_t07421 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RMB_t07375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RMB_t07407 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D RMB_t07369 tRNA-Met K14230 tRNA-Met; tRNA Met D RMB_t07413 tRNA-Met K14230 tRNA-Met; tRNA Met D RMB_t07363 tRNA-Met K14230 tRNA-Met; tRNA Met D RMB_t07359 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D RMB_t07415 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D RMB_t07371 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RMB_t07395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RMB_t07397 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RMB_t07367 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RMB_t07361 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RMB_t07419 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RMB_t07365 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D RMB_t07377 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D RMB_t07381 tRNA-Val K14237 tRNA-Val; tRNA Val D RMB_t07401 tRNA-Val K14237 tRNA-Val; tRNA Val D RMB_03150 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_05835 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_01100 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D RMB_01095 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D RMB_01105 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D RMB_07290 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D RMB_01065 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D RMB_07050 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D RMB_07045 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D RMB_01620 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D RMB_01845 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D RMB_00590 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D RMB_02675 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D RMB_01515 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D RMB_02645 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D RMB_05100 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D RMB_03205 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D RMB_05500 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D RMB_00675 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D RMB_05385 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D RMB_06020 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D RMB_05125 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D RMB_05120 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D RMB_03820 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D RMB_04170 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:rmi03060] D RMB_03020 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D RMB_01010 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D RMB_00600 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D RMB_03500 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D RMB_00910 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D RMB_03505 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D RMB_00060 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D RMB_03575 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D RMB_00645 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D RMB_01215 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D RMB_01910 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D RMB_02110 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D RMB_01850 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D RMB_00920 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D RMB_05220 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:rmi04122] D RMB_04050 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_04055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_06030 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:rmi03018] D RMB_06555 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D RMB_06435 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D RMB_04700 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D RMB_04495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D RMB_04960 metallo-beta-lactamase family hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D RMB_01345 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D RMB_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RMB_00270 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:rmi03030] D RMB_02325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RMB_01870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RMB_01210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RMB_01370 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RMB_07185 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RMB_05115 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RMB_03930 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D RMB_07275 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D RMB_06930 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RMB_02345 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D RMB_01465 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D RMB_02430 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:rmi03410] D RMB_02155 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D RMB_05640 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D RMB_02740 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D RMB_07000 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D RMB_06415 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RMB_02795 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RMB_04505 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D RMB_02430 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:rmi03420] D RMB_03400 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D RMB_06925 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D RMB_01470 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D RMB_03640 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D RMB_04905 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D RMB_02430 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:rmi03430] D RMB_06080 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D RMB_07105 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D RMB_04905 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D RMB_02815 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D RMB_05670 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D RMB_04505 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D RMB_06930 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RMB_01870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RMB_05115 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RMB_01370 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RMB_01210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RMB_02325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RMB_07185 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RMB_02430 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:rmi03440] D RMB_04505 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D RMB_06930 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RMB_00375 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D RMB_03885 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D RMB_04980 recR; recombination protein RecR K06187 recR; recombination protein RecR D RMB_02000 recA; recombinase A K03553 recA; recombination protein RecA D RMB_05370 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D RMB_05350 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D RMB_00935 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D RMB_03465 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D RMB_01870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RMB_05115 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RMB_01370 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RMB_01210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RMB_02325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RMB_07185 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RMB_03945 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:rmi02010] D RMB_00535 ABC transporter K07323 mlaC; phospholipid transport system substrate-binding protein D RMB_02355 ABC transporter substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D RMB_00520 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D RMB_00515 ribonucleotide ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D RMB_00265 zinc/manganese ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein D RMB_03160 Zinc/manganese ABC transporter permease protein K09816 znuB; zinc transport system permease protein D RMB_06910 Zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D RMB_04605 BioY family protein K03523 bioY; biotin transport system substrate-specific component D RMB_00020 O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein D RMB_00015 O-antigen export system ATP-binding protein RfbE K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D RMB_02540 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein D RMB_02535 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D RMB_06885 Heme exporter protein C K02195 ccmC; heme exporter protein C D RMB_06365 heme exporter protein B K02194 ccmB; heme exporter protein B D RMB_01780 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D RMB_07190 putative permease K07091 lptF; lipopolysaccharide export system permease protein D RMB_01935 putative permease K11720 lptG; lipopolysaccharide export system permease protein D RMB_04720 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D RMB_05345 multidrug resistance protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D RMB_01480 multidrug resistance protein Atm1 K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D RMB_05950 alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:rmi03070] D RMB_06635 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D RMB_03500 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D RMB_00910 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D RMB_01010 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D RMB_00600 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D RMB_03020 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D RMB_03505 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D RMB_00060 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D RMB_03575 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D RMB_01910 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D RMB_00645 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D RMB_01215 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D RMB_02110 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D RMB_01850 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D RMB_00830 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D RMB_06145 VirB9 K03204 virB9; type IV secretion system protein VirB9 D RMB_06165 VirB9 K03204 virB9; type IV secretion system protein VirB9 D RMB_00840 VirB6 K03201 virB6; type IV secretion system protein VirB6 D RMB_00845 VirB6 K03201 virB6; type IV secretion system protein VirB6 D RMB_00850 VirB6 K03201 virB6; type IV secretion system protein VirB6 D RMB_00855 VirB6 K03201 virB6; type IV secretion system protein VirB6 D RMB_00860 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RMB_06150 virulence protein K03203 virB8; type IV secretion system protein VirB8 D RMB_06160 virulence protein K03203 virB8; type IV secretion system protein VirB8 D RMB_06140 VirB10 K03195 virB10; type IV secretion system protein VirB10 D RMB_01840 VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D RMB_00835 type IV secretion system ATPase VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D RMB_06135 type IV secretion system ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D RMB_06130 type IV secretion system component VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:rmi02020] D RMB_05075 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D RMB_05070 PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D RMB_00965 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D RMB_06430 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D RMB_03385 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D RMB_04810 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D RMB_04665 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D RMB_03235 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D RMB_03705 nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D RMB_06610 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D RMB_06550 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D RMB_00640 transcriptional activator protein CzcR K13584 ctrA; two-component system, cell cycle response regulator CtrA D RMB_06355 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D RMB_06350 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D RMB_06340 cytochrome c1, heme protein precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D RMB_06455 cytochrome c K08738 CYC; cytochrome c D RMB_01580 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D RMB_01585 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D RMB_06635 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D RMB_05775 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D RMB_06355 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:rmi02024] D RMB_00060 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D RMB_01010 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D RMB_00600 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D RMB_03020 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D RMB_03505 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D RMB_03575 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D RMB_01910 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D RMB_00645 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D RMB_01215 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D RMB_07280 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:rmi01501] D RMB_05340 AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D RMB_04125 AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D RMB_06635 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D RMB_01700 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D RMB_03690 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D RMB_03675 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:rmi01502] D RMB_06475 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D RMB_00525 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D RMB_03410 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D RMB_03415 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D RMB_05200 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rmi01503] D RMB_00965 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D RMB_06635 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D RMB_00775 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:rmi01000] C 01001 Protein kinases [BR:rmi01001] D RMB_05075 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D RMB_03235 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D RMB_06610 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:rmi01009] D RMB_06960 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:rmi01002] D RMB_05220 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D RMB_05250 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D RMB_01055 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D RMB_07180 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D RMB_06845 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D RMB_04085 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D RMB_00100 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D RMB_01155 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D RMB_00965 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D RMB_06200 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D RMB_05335 penicillin-binding protein dacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D RMB_04425 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D RMB_04880 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D RMB_00920 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D RMB_06615 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D RMB_04490 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D RMB_05265 microcin C7 self-immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D RMB_05925 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D RMB_03755 large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin D RMB_00960 membrane protease subunit stomatin/prohibitin-like protein K04087 hflC; modulator of FtsH protease HflC D RMB_00955 protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:rmi01003] D RMB_01700 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:rmi01005] D RMB_00775 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D RMB_05870 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D RMB_06445 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D RMB_00785 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D RMB_02335 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D RMB_02450 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D RMB_02455 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D RMB_00570 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D RMB_00715 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D RMB_05410 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D RMB_04705 KpsF K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rmi01011] D RMB_03555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D RMB_06480 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D RMB_06485 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D RMB_05210 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D RMB_03405 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D RMB_06475 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D RMB_00525 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D RMB_05265 microcin C7 self-immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D RMB_03415 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D RMB_05200 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D RMB_03480 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D RMB_01700 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D RMB_03690 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D RMB_03675 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D RMB_05335 penicillin-binding protein dacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D RMB_05280 soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D RMB_05860 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D RMB_05330 rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D RMB_07120 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:rmi01004] D RMB_02305 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D RMB_01925 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D RMB_01985 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D RMB_01995 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D RMB_00780 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D RMB_05565 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D RMB_00140 Acyl-CoA desaturase 1 K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D RMB_04165 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:rmi01006] D RMB_04090 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D RMB_05080 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D RMB_04730 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D RMB_02660 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D RMB_05705 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:rmi01007] D RMB_05500 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D RMB_03150 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_05835 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_03820 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D RMB_04170 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D RMB_00590 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D RMB_00675 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D RMB_02675 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D RMB_03205 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D RMB_02645 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D RMB_05100 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D RMB_01065 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D RMB_06020 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D RMB_07050 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D RMB_07045 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D RMB_01845 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D RMB_05385 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D RMB_01620 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D RMB_07290 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D RMB_05125 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D RMB_05120 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D RMB_00560 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D RMB_06965 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D RMB_05065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:rmi00194] D RMB_01750 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D RMB_01745 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D RMB_01740 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D RMB_01735 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D RMB_01730 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D RMB_00330 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D RMB_00335 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D RMB_00340 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D RMB_00345 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D RMB_00350 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:rmi03000] D RMB_04045 Iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D RMB_03830 Putative transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D RMB_04585 biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D RMB_01810 hypothetical protein K07726 K07726; putative transcriptional regulator D RMB_03515 putative antitoxin of toxin-antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D RMB_06495 hypothetical protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D RMB_00730 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RMB_00360 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D RMB_00430 hypothetical protein K07735 algH; putative transcriptional regulator D RMB_06770 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D RMB_03660 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:rmi03021] D RMB_03040 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D RMB_01040 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D RMB_01045 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D RMB_03560 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D RMB_07280 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D RMB_06045 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D RMB_03855 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D RMB_01160 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D RMB_01015 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D RMB_06770 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D RMB_07265 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D RMB_04495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:rmi03019] D RMB_06435 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D RMB_00925 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RMB_04960 metallo-beta-lactamase family hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D RMB_04700 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D RMB_04495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D RMB_01345 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D RMB_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RMB_00270 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D RMB_06555 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome C 03011 Ribosome [BR:rmi03011] D RMB_04430 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D RMB_00585 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D RMB_02950 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D RMB_05710 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D RMB_03005 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D RMB_00120 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D RMB_01000 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D RMB_02990 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D RMB_06585 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D RMB_02915 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D RMB_03035 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D RMB_00995 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D RMB_03030 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D RMB_02985 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D RMB_04695 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D RMB_07115 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D RMB_02965 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D RMB_00115 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D RMB_02940 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D RMB_03050 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D RMB_03230 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D RMB_01025 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D RMB_02935 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D RMB_02920 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D RMB_02925 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D RMB_02980 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D RMB_02995 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D RMB_00110 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D RMB_01030 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D RMB_01020 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D RMB_01035 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D RMB_06590 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D RMB_02970 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D RMB_03015 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D RMB_02955 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D RMB_03045 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D RMB_03000 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D RMB_00900 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D RMB_03300 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D RMB_02100 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D RMB_02945 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D RMB_02930 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D RMB_02975 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D RMB_02095 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D RMB_00810 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D RMB_02960 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D RMB_03010 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D RMB_00815 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D RMB_01920 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D RMB_07110 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D RMB_03295 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D RMB_03305 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D RMB_04320 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D RMB_03325 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D RMB_r07423 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D RMB_r07425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D RMB_r07427 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:rmi03009] D RMB_00925 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RMB_00930 era; GTPase Era K03595 era; GTPase D RMB_06980 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D RMB_06770 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D RMB_03855 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D RMB_01160 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D RMB_01015 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D RMB_02835 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D RMB_03900 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D RMB_01190 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D RMB_00740 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D RMB_03665 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D RMB_02120 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D RMB_03825 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D RMB_02905 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D RMB_01165 ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D RMB_03910 ribosomal large subunit pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D RMB_06425 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D RMB_07005 ribosomal large subunit pseudouridine synthases RluD subfamily protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D RMB_05680 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D RMB_06435 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D RMB_05800 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D RMB_02785 GTP-binding protein Der K03977 engA; GTPase D RMB_07040 Sua5/YciO/YrdC/YwlC family translation factor protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D RMB_04995 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D RMB_03850 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D RMB_01645 Iojap-related protein K09710 ybeB; ribosome-associated protein D RMB_02185 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor D RMB_03345 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:rmi03016] D RMB_03150 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_05835 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_05385 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D RMB_03205 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D RMB_05100 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D RMB_02675 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D RMB_00675 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D RMB_01065 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D RMB_07290 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D RMB_01620 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D RMB_01845 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D RMB_00590 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D RMB_02645 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D RMB_06020 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D RMB_05125 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D RMB_05120 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D RMB_03820 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D RMB_04170 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D RMB_05940 protein kinase C inhibitor 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D RMB_07285 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D RMB_04690 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D RMB_04050 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_04055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_07040 Sua5/YciO/YrdC/YwlC family translation factor protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D RMB_04730 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D RMB_02035 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D RMB_00745 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D RMB_06085 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D RMB_03290 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D RMB_03085 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D RMB_04250 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D RMB_05095 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D RMB_00725 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D RMB_05500 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D RMB_07050 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D RMB_07045 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D RMB_06890 cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D RMB_01695 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D RMB_05130 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D RMB_00940 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D RMB_00895 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D RMB_06030 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D RMB_04065 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D RMB_04240 putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D RMB_01545 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D RMB_02565 trans-regulatory protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D RMB_01295 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D RMB_03310 organic radical activating protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D RMB_00635 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D RMB_07065 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D RMB_02415 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D RMB_00105 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D RMB_03875 putative glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D RMB_00145 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D RMB_00260 Putative P-loop hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D RMB_04700 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:rmi03012] D RMB_03860 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D RMB_04520 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D RMB_00580 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D RMB_02910 elongation factor Tu K02358 tuf; elongation factor Tu D RMB_01005 elongation factor G K02355 fusA; elongation factor G D RMB_04510 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D RMB_01115 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D RMB_07035 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D RMB_03330 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D RMB_06760 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D RMB_06545 elongation factor P K02356 efp; elongation factor P D RMB_06310 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:rmi03110] D RMB_00155 chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D RMB_02575 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D RMB_05920 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D RMB_06960 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D RMB_01345 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D RMB_01455 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA D RMB_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RMB_01340 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D RMB_01460 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D RMB_03080 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D RMB_03110 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D RMB_00965 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D RMB_00100 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D RMB_00345 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D RMB_00645 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D RMB_03635 copper(I)-binding protein K09796 pccA; periplasmic copper chaperone A D RMB_00010 thioredoxin K03671 TXN; thioredoxin D RMB_01475 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D RMB_02160 glutaredoxin-like protein grla K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking [BR:rmi04131] D RMB_00750 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D RMB_06960 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:rmi03051] D RMB_06960 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:rmi03032] D RMB_02345 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D RMB_01205 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D RMB_02465 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D RMB_04485 integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D RMB_03385 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D RMB_03930 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D RMB_07275 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D RMB_06930 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RMB_01870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RMB_05115 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RMB_07185 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RMB_01370 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RMB_01210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RMB_02325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RMB_01465 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D RMB_02430 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D RMB_01485 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D RMB_03550 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D RMB_00665 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D RMB_06620 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D RMB_05830 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:rmi03036] D RMB_00925 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RMB_01205 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D RMB_02465 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D RMB_04485 integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D RMB_03385 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D RMB_06465 cell division protein FtsA K03590 ftsA; cell division protein FtsA D RMB_03675 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D RMB_06830 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D RMB_03670 cell division protein FtsL K03586 ftsL; cell division protein FtsL D RMB_06470 cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ D RMB_05205 cell division protein FtsW K03588 ftsW; cell division protein FtsW D RMB_02880 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RMB_01535 putative ATPase n2B K06916 zapE; cell division protein ZapE D RMB_01940 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D RMB_01945 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D RMB_06205 rod shape-determining protein rodA K05837 rodA; rod shape determining protein RodA D RMB_00735 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D RMB_01060 chromosome partitioning protein-like protein K03496 parA; chromosome partitioning protein D RMB_07430 plasmid stability protein ParA K03496 parA; chromosome partitioning protein D RMB_00730 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RMB_00665 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D RMB_06620 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D RMB_00745 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D RMB_00740 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D RMB_06775 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D RMB_05580 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D RMB_00950 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D RMB_05380 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D RMB_00820 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:rmi03400] D RMB_03625 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D RMB_05640 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D RMB_02155 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D RMB_05400 ADP-ribose pyrophosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D RMB_05285 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D RMB_07000 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D RMB_02740 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D RMB_06415 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RMB_02795 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RMB_04505 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D RMB_02430 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D RMB_06925 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D RMB_01470 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D RMB_03640 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D RMB_04905 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D RMB_01040 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D RMB_01045 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D RMB_03040 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D RMB_03560 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D RMB_03400 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D RMB_06080 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D RMB_07105 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D RMB_02815 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D RMB_05670 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D RMB_01870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RMB_05115 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RMB_07185 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RMB_01370 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RMB_01210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RMB_02325 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RMB_06930 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RMB_02000 recA; recombinase A K03553 recA; recombination protein RecA D RMB_05370 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D RMB_05350 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D RMB_00935 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D RMB_03945 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D RMB_03895 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D RMB_00375 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D RMB_03465 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D RMB_03885 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D RMB_04980 recR; recombination protein RecR K06187 recR; recombination protein RecR D RMB_01325 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D RMB_02315 ATP-dependent helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D RMB_05260 endonuclease K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D RMB_01485 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D RMB_03550 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D RMB_05830 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D RMB_01205 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D RMB_02465 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D RMB_04485 integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D RMB_04785 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D RMB_04760 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:rmi03029] D RMB_06350 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D RMB_03860 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D RMB_04520 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D RMB_00580 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D RMB_02910 elongation factor Tu K02358 tuf; elongation factor Tu D RMB_01005 elongation factor G K02355 fusA; elongation factor G D RMB_00930 era; GTPase Era K03595 era; GTPase D RMB_03820 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D RMB_05100 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D RMB_01065 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D RMB_00675 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D RMB_01100 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D RMB_01095 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D RMB_01105 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D RMB_06930 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RMB_01150 outer membrane protein omp1 K07277 SAM50; outer membrane protein insertion porin family D RMB_01345 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D RMB_03080 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D RMB_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RMB_03110 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D RMB_01340 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D RMB_04050 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_04055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_04060 scaffold protein K22068 ISCU; iron-sulfur cluster assembly enzyme ISCU, mitochondrial D RMB_01460 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D RMB_02160 glutaredoxin-like protein grla K07390 grxD; monothiol glutaredoxin D RMB_00075 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 D RMB_00950 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D RMB_05705 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D RMB_06040 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D RMB_06430 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D RMB_00060 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D RMB_02320 Surfeit locus protein 1 K14998 SURF1; surfeit locus 1 family protein D RMB_00425 Sco2 protein precursor K07152 SCO1; protein SCO1 D RMB_03495 Sco2 protein precursor K07152 SCO1; protein SCO1 D RMB_06960 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:rmi02000] D RMB_05345 multidrug resistance protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D RMB_01480 multidrug resistance protein Atm1 K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D RMB_02555 multidrug resistance protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D RMB_01570 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D RMB_05950 alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D RMB_01980 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D RMB_02355 ABC transporter substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D RMB_00520 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D RMB_00515 ribonucleotide ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D RMB_00535 ABC transporter K07323 mlaC; phospholipid transport system substrate-binding protein D RMB_01090 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D RMB_00990 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D RMB_07215 glutamine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D RMB_00265 zinc/manganese ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein D RMB_03160 Zinc/manganese ABC transporter permease protein K09816 znuB; zinc transport system permease protein D RMB_06910 Zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D RMB_04605 BioY family protein K03523 bioY; biotin transport system substrate-specific component D RMB_00020 O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein D RMB_00015 O-antigen export system ATP-binding protein RfbE K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D RMB_07190 putative permease K07091 lptF; lipopolysaccharide export system permease protein D RMB_01935 putative permease K11720 lptG; lipopolysaccharide export system permease protein D RMB_04720 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D RMB_02540 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein D RMB_02535 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D RMB_06885 Heme exporter protein C K02195 ccmC; heme exporter protein C D RMB_06365 heme exporter protein B K02194 ccmB; heme exporter protein B D RMB_01780 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D RMB_00610 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D RMB_07320 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D RMB_05465 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D RMB_00755 sugar phosphate permease K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D RMB_05340 AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D RMB_04125 AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D RMB_02545 MFS-type bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D RMB_01130 multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D RMB_04615 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D RMB_00065 hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel D RMB_03540 magnesium transporter K06213 mgtE; magnesium transporter D RMB_05980 hypothetical protein K03562 tolQ; biopolymer transport protein TolQ D RMB_05975 hypothetical protein K03560 tolR; biopolymer transport protein TolR D RMB_03270 magnesium/nickel/cobalt transporter CorA K03284 corA; magnesium transporter D RMB_02525 hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D RMB_06635 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D RMB_01150 outer membrane protein omp1 K07277 SAM50; outer membrane protein insertion porin family D RMB_01330 DNA uptake lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D RMB_04715 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D RMB_04710 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D RMB_02825 organic solvent tolerance protein-like protein K04744 lptD; LPS-assembly protein D RMB_02190 hemolysin C K06189 corC; hemolysin (HlyC) family protein D RMB_06895 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D RMB_00615 S-adenosylmethionine transporter K15270 sam; S-adenosylmethionine uptake transporter D RMB_07135 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D RMB_01650 glutathione-regulated potassium-efflux system protein KefB K03455 KEA1_2_3; K+:H+ antiporter D RMB_06370 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D RMB_06170 putative monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D RMB_06175 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D RMB_06180 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D RMB_06195 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D RMB_01125 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D RMB_06375 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D RMB_03480 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D RMB_05495 putative permease K13936 mdcF; malonate transporter and related proteins D RMB_04945 putative permease K24180 mleP; malate permease and related proteins D RMB_04130 lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D RMB_05205 cell division protein FtsW K03588 ftsW; cell division protein FtsW D RMB_05315 FTR1 family protein K07243 FTR; high-affinity iron transporter D RMB_02790 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D RMB_01930 peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein D RMB_06050 tolB; translocation protein TolB K03641 tolB; TolB protein D RMB_06520 multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system D RMB_05955 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system D RMB_02135 hypothetical protein K16348 ecnB; entericidin B D RMB_02520 cytochrome c-type biogenesis protein ccmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:rmi02044] D RMB_06635 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D RMB_05950 alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D RMB_05955 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system D RMB_00830 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D RMB_01840 VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D RMB_00835 type IV secretion system ATPase VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D RMB_00840 VirB6 K03201 virB6; type IV secretion system protein VirB6 D RMB_00845 VirB6 K03201 virB6; type IV secretion system protein VirB6 D RMB_00850 VirB6 K03201 virB6; type IV secretion system protein VirB6 D RMB_00855 VirB6 K03201 virB6; type IV secretion system protein VirB6 D RMB_00860 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RMB_06150 virulence protein K03203 virB8; type IV secretion system protein VirB8 D RMB_06160 virulence protein K03203 virB8; type IV secretion system protein VirB8 D RMB_06145 VirB9 K03204 virB9; type IV secretion system protein VirB9 D RMB_06165 VirB9 K03204 virB9; type IV secretion system protein VirB9 D RMB_06140 VirB10 K03195 virB10; type IV secretion system protein VirB10 D RMB_06135 type IV secretion system ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D RMB_06130 type IV secretion system component VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D RMB_04810 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D RMB_03575 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D RMB_00645 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D RMB_03500 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D RMB_01010 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D RMB_00910 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D RMB_00600 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D RMB_03020 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D RMB_01215 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D RMB_01910 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D RMB_03505 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D RMB_00060 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D RMB_02110 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D RMB_01850 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:rmi02042] D RMB_02525 hemolysin-like protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:rmi02022] D RMB_05075 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D RMB_05070 PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D RMB_03235 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D RMB_03705 nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D RMB_06610 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D RMB_06550 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D RMB_00640 transcriptional activator protein CzcR K13584 ctrA; two-component system, cell cycle response regulator CtrA C 02035 Bacterial motility proteins [BR:rmi02035] D RMB_04810 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:rmi04812] D RMB_01975 hypothetical protein K17292 TBCA; tubulin-specific chaperone A D RMB_01940 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D RMB_02880 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RMB_06465 cell division protein FtsA K03590 ftsA; cell division protein FtsA D RMB_00735 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D RMB_01060 chromosome partitioning protein-like protein K03496 parA; chromosome partitioning protein D RMB_07430 plasmid stability protein ParA K03496 parA; chromosome partitioning protein D RMB_00730 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:rmi04147] D RMB_06960 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D RMB_05820 thioredoxin peroxidase 1 K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D RMB_03115 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RMB_01345 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D RMB_02910 elongation factor Tu K02358 tuf; elongation factor Tu D RMB_05940 protein kinase C inhibitor 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D RMB_03025 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D RMB_04665 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D RMB_03955 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D RMB_06570 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D RMB_04265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RMB_01975 hypothetical protein K17292 TBCA; tubulin-specific chaperone A C 02048 Prokaryotic defense system [BR:rmi02048] D RMB_00030 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D RMB_03515 putative antitoxin of toxin-antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D RMB_07195 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D RMB_07200 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J D RMB_00555 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D RMB_01595 putative toxin of toxin-antitoxin (TA) system StbD K19158 yoeB; toxin YoeB [EC:3.1.-.-] D RMB_00550 antitoxin of toxin-antitoxin K19159 yefM; antitoxin YefM D RMB_01590 antitoxin of toxin-antitoxin (TA) system StbD K19159 yefM; antitoxin YefM D RMB_07060 putative antitoxin of toxin-antitoxin (TA) system K19165 phd; antitoxin Phd D RMB_07055 toxin of toxin-antitoxin K07062 fitB; toxin FitB [EC:3.1.-.-] D RMB_02880 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RMB_01940 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D RMB_00665 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D RMB_06620 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D RMB_03150 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_05835 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RMB_03395 hypothetical protein K09159 cptB; antitoxin CptB D RMB_04050 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RMB_04055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:rmi01504] D RMB_04420 streptomycin 6-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D RMB_04350 hexapeptide repeat-containing transferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D RMB_06635 outer membrane protein tolC precursor K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:rmi03100] D RMB_t07399 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D RMB_t07387 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D RMB_t07393 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RMB_t07417 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RMB_t07389 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RMB_t07411 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D RMB_t07403 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D RMB_t07409 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D RMB_t07391 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D RMB_t07357 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D RMB_t07383 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D RMB_t07379 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D RMB_t07373 tRNA-His K14226 tRNA-His; tRNA His D RMB_t07405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D RMB_t07385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RMB_t07421 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RMB_t07375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RMB_t07407 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D RMB_t07369 tRNA-Met K14230 tRNA-Met; tRNA Met D RMB_t07413 tRNA-Met K14230 tRNA-Met; tRNA Met D RMB_t07363 tRNA-Met K14230 tRNA-Met; tRNA Met D RMB_t07359 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D RMB_t07415 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D RMB_t07371 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RMB_t07395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RMB_t07397 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RMB_t07367 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RMB_t07361 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RMB_t07419 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RMB_t07365 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D RMB_t07377 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D RMB_t07381 tRNA-Val K14237 tRNA-Val; tRNA Val D RMB_t07401 tRNA-Val K14237 tRNA-Val; tRNA Val D RMB_r07425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D RMB_r07427 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D RMB_r07423 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D RMB_02460 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D RMB_05560 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D RMB_00070 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D RMB_00005 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D RMB_02680 putative deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D RMB_05550 negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D RMB_00765 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D RMB_04655 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D RMB_01510 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D RMB_01450 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D RMB_06880 ferredoxin K05524 fdxA; ferredoxin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism D RMB_02750 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D RMB_03225 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D RMB_01180 oligoketide cyclase/lipid transport protein K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D RMB_02165 serine esterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D RMB_02840 cold shock-like protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D RMB_06975 tig; trigger factor K03545 tig; trigger factor D RMB_05055 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D RMB_06855 DNA repair protein RadC K03630 radC; DNA repair protein RadC D RMB_02615 RmuC family protein K09760 rmuC; DNA recombination protein RmuC D RMB_05825 DNA processing protein DprA K04096 smf; DNA processing protein D RMB_07450 integrase catalytic subunit K07497 K07497; putative transposase D RMB_07485 hypothetical protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D RMB_07235 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D RMB_06025 cationic amino acid transporter-1 K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D RMB_04080 putrescine-ornithine antiporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D RMB_01200 hydrophobe/amphiphile efflux-1 (HAE1) family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D RMB_04685 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D RMB_02210 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D RMB_00760 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family C 99978 Cell growth D RMB_05320 intracellular septation protein A K06190 ispZ; intracellular septation protein C 99993 Cell motility C 99995 Signaling proteins D RMB_06400 GTP-binding protein K06207 typA; GTP-binding protein C 99992 Structural proteins D RMB_00540 VacJ lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA D RMB_00620 OmpW family outer-membrane protein K07275 ompW; outer membrane protein D RMB_05685 outer membrane assembly protein K07289 asmA; AsmA protein D RMB_03490 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE C 99994 Others D RMB_01830 tellurium resistance protein TerC K05794 terC; tellurite resistance protein TerC D RMB_01290 divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D RMB_05855 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY B B 09194 Poorly characterized C 99996 General function prediction only D RMB_01335 cation transport regulator ChaB K06197 chaB; cation transport regulator D RMB_04590 putative esterase of the alpha/beta hydrolase superfamily protein K07001 K07001; NTE family protein D RMB_00685 HesB protein family protein K15724 erpA; iron-sulfur cluster insertion protein D RMB_04670 putative ribonuclease BN K07058 K07058; membrane protein D RMB_00970 hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D RMB_06625 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D RMB_01255 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D RMB_06825 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D RMB_05520 hypothetical protein K06867 K06867; uncharacterized protein D RMB_05740 putative hydrolase/acyltransferase K06889 K06889; uncharacterized protein D RMB_01075 integral membrane protein K06890 K06890; uncharacterized protein D RMB_04150 alpha/beta hydrolase K07018 K07018; uncharacterized protein D RMB_01440 TRAP-type transport system, periplasmic protein K07080 K07080; uncharacterized protein D RMB_02775 hypothetical protein K07133 K07133; uncharacterized protein D RMB_05635 hypothetical protein K08998 K08998; uncharacterized protein D RMB_06955 hypothetical protein K09131 K09131; uncharacterized protein D RMB_01195 hypothetical protein K09779 K09779; uncharacterized protein D RMB_04180 hypothetical protein K09803 K09803; uncharacterized protein D RMB_04470 hypothetical protein K09861 K09861; uncharacterized protein D RMB_02340 hypothetical protein K09985 K09985; uncharacterized protein D RMB_00630 putative cytoplasmic protein K09987 K09987; uncharacterized protein D RMB_06630 hypothetical protein K09991 K09991; uncharacterized protein D RMB_00945 putative nucleoside-diphosphate-sugar epimerase K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 2, 2024