+D GENES KO
#
KEGG Orthology (KO) - Rhodopseudomonas palustris BisA53
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rpe00010]
D RPE_4618 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RPE_3708 glucose-6-phosphate isomerase / transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D RPE_0769 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D RPE_2682 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RPE_2936 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RPE_4722 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPE_2685 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPE_2593 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RPE_4728 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RPE_4725 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RPE_0342 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPE_2607 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPE_3057 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPE_4110 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPE_4405 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RPE_2612 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RPE_2614 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RPE_2616 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_0766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RPE_0984 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPE_0602 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPE_0983 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPE_0601 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPE_4678 Alcohol dehydrogenase, zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RPE_3692 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RPE_3298 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RPE_2019 Alcohol dehydrogenase, zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RPE_2083 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RPE_3139 Pyrrolo-quinoline quinone K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7]
D RPE_3136 methanol dehydrogenase, beta subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_2388 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_4586 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_0069 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_2375 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RPE_2582 HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D RPE_1281 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPE_4278 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3492 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_0819 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rpe00020]
D RPE_2567 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RPE_0310 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RPE_1602 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RPE_0297 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RPE_0296 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_0984 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPE_0602 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPE_0983 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPE_0601 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPE_0982 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RPE_3202 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPE_0298 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPE_0299 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPE_3203 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPE_0804 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RPE_0512 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RPE_0514 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RPE_0510 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RPE_0511 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RPE_1571 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RPE_2144 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RPE_0300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPE_0635 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RPE_0819 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RPE_2612 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RPE_2614 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RPE_2616 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPE_0766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:rpe00030]
D RPE_3708 glucose-6-phosphate isomerase / transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D RPE_3710 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RPE_3711 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RPE_3709 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RPE_1642 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RPE_1517 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_1518 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_2684 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_4238 Transketolase, central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_4729 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_1508 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RPE_1987 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RPE_0572 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RPE_1281 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPE_4278 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3492 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3103 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D RPE_4148 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RPE_1430 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RPE_2028 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RPE_3712 gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D RPE_3720 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RPE_4722 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPE_2685 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPE_2682 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RPE_2936 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RPE_0769 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:rpe00040]
D RPE_3505 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_4206 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1120 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1513 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_0687 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPE_1642 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RPE_3688 Dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D RPE_4234 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:rpe00051]
D RPE_4272 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RPE_4278 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3492 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_4261 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RPE_3689 short-chain dehydrogenase/reductase SDR K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D RPE_3690 short-chain dehydrogenase/reductase SDR K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D RPE_0769 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D RPE_2682 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RPE_2936 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RPE_4722 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPE_2685 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPE_2593 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RPE_4260 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RPE_0572 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RPE_0573 ribulose-5-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D RPE_0824 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rpe00052]
D RPE_1448 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_3508 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_4271 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1081 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1510 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_3197 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1514 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_0687 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPE_1281 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPE_4278 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3492 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_4618 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RPE_0769 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D RPE_4865 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rpe00053]
D RPE_3505 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_4206 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1120 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1513 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_2028 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RPE_3503 NAD-dependent epimerase/dehydratase K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D RPE_1454 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rpe00500]
D RPE_4865 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPE_0687 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPE_4619 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RPE_4253 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RPE_0801 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RPE_0800 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D RPE_3718 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RPE_4826 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RPE_3717 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D RPE_3644 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RPE_3715 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RPE_3716 alpha amylase, catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D RPE_3509 glycosyl transferase, group 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D RPE_1274 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RPE_3719 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RPE_3721 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D RPE_1273 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D RPE_1278 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RPE_4553 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RPE_4552 HAD-superfamily hydrolase, subfamily IIB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D RPE_1281 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPE_4278 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3492 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_4618 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RPE_3708 glucose-6-phosphate isomerase / transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rpe00520]
D RPE_2693 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RPE_2786 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RPE_4168 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RPE_2785 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RPE_2971 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RPE_0464 protein of unknown function UPF0079 K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D RPE_0462 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RPE_4488 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RPE_2110 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RPE_4236 N-acetylneuraminate synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132]
D RPE_4239 acylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D RPE_1098 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RPE_2674 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RPE_0275 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RPE_3495 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RPE_4618 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RPE_1281 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPE_4278 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3492 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_0687 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPE_3505 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_4206 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1120 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1513 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1448 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_3508 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_4271 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1081 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1510 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_3197 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1514 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1454 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RPE_0824 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RPE_3708 glucose-6-phosphate isomerase / transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D RPE_4272 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RPE_4261 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RPE_4260 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RPE_3503 NAD-dependent epimerase/dehydratase K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D RPE_4253 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RPE_4254 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RPE_0801 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rpe00620]
D RPE_2388 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_4586 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_0069 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_0766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RPE_0984 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPE_0602 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPE_0983 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPE_0601 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPE_2612 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RPE_2614 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RPE_2616 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_3101 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RPE_3692 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RPE_3298 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RPE_2019 Alcohol dehydrogenase, zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RPE_4678 Alcohol dehydrogenase, zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RPE_2083 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RPE_3139 Pyrrolo-quinoline quinone K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7]
D RPE_3136 methanol dehydrogenase, beta subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7]
D RPE_3162 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RPE_3863 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RPE_3057 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPE_4110 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPE_0140 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RPE_2987 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RPE_2988 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RPE_0456 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RPE_3437 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_0804 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RPE_2375 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RPE_4170 L-lactate dehydrogenase (cytochrome) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RPE_2140 FAD linked oxidase domain protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RPE_2920 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RPE_0164 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RPE_0233 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RPE_3275 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)))/Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RPE_3438 2,3-dimethylmalate lyase K01003 bcpA; oxaloacetate decarboxylase [EC:4.1.1.112]
D RPE_0635 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RPE_0300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPE_1571 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RPE_2144 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RPE_1791 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RPE_0819 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RPE_4405 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RPE_1757 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2002 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RPE_2209 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RPE_4520 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rpe00630]
D RPE_1395 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RPE_2388 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_4586 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_0069 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_1757 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D RPE_0300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPE_2567 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RPE_0310 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0167 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RPE_4118 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D RPE_2539 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RPE_3439 Carbamoyl-phosphate synthase L chain, ATP-binding protein K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RPE_3541 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RPE_1852 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPE_1854 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPE_3223 Methylmalonyl-CoA mutase-like protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RPE_3224 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RPE_4694 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RPE_4693 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RPE_4692 protein of unknown function DUF224, cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RPE_0244 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D RPE_1986 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RPE_0422 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RPE_1361 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RPE_2686 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RPE_1362 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RPE_0897 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RPE_2505 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPE_2808 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPE_1595 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RPE_1597 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_1596 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RPE_3720 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RPE_4645 formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D RPE_4647 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RPE_4648 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RPE_4649 NADH dehydrogenase (ubiquinone), 24 kDa subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RPE_4219 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RPE_4597 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:rpe00640]
D RPE_2388 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_4586 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_0069 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_4455 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RPE_2375 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RPE_3162 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RPE_3863 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_3101 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RPE_4399 Alcohol dehydrogenase, zinc-binding domain protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_0140 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RPE_2987 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RPE_2988 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RPE_0456 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RPE_0915 aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RPE_3439 Carbamoyl-phosphate synthase L chain, ATP-binding protein K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RPE_3541 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RPE_2539 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RPE_1852 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPE_1854 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPE_3223 Methylmalonyl-CoA mutase-like protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RPE_3224 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RPE_0299 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPE_3203 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPE_3202 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPE_0298 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPE_2382 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RPE_3171 2,3-dimethylmalate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:rpe00650]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4847 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RPE_3780 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_3692 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RPE_4118 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D RPE_2940 poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RPE_1731 Poly-beta-hydroxybutyrate polymerase domain protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RPE_0226 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RPE_0167 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RPE_0512 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RPE_0514 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RPE_0510 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RPE_0511 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RPE_0222 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RPE_0804 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RPE_3101 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RPE_0766 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RPE_0984 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPE_0602 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPE_0983 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPE_0601 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPE_2910 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RPE_4078 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RPE_4077 butyryl-CoA:acetate CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RPE_1773 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RPE_0220 beta-lactamase K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114]
D RPE_2004 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_2187 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_1801 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_4300 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_2189 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rpe00660]
D RPE_2004 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_2187 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_1801 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_4300 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_2189 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RPE_0299 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPE_3203 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPE_3202 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPE_0298 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPE_0747 Dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D RPE_0332 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RPE_0339 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RPE_0480 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rpe00562]
D RPE_4719 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RPE_0878 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RPE_2382 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RPE_2593 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rpe00190]
D RPE_1710 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RPE_2519 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RPE_1711 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RPE_2520 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RPE_2521 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RPE_2523 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RPE_1712 NADH dehydrogenase I, D subunit K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D RPE_1713 NADH dehydrogenase (ubiquinone), 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RPE_2525 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RPE_1714 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RPE_2527 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RPE_2529 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RPE_1715 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RPE_2530 respiratory-chain NADH dehydrogenase, subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RPE_1716 respiratory-chain NADH dehydrogenase, subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RPE_1717 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RPE_2531 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RPE_1718 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RPE_2532 NADH dehydrogenase (quinone) K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RPE_1719 NADH-ubiquinone oxidoreductase, chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RPE_2533 NADH-ubiquinone oxidoreductase, chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RPE_1720 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RPE_2534 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RPE_1721 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RPE_2535 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RPE_1722 NADH dehydrogenase (quinone) K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RPE_2536 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RPE_2075 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RPE_0512 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RPE_0514 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RPE_0510 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RPE_0511 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RPE_3977 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPE_1207 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPE_0948 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPE_0949 cytochrome c1 K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D RPE_4753 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RPE_4756 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RPE_4752 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RPE_3866 Cytochrome-c oxidase K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D RPE_3865 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RPE_4751 Cytochrome-c oxidase K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RPE_4755 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RPE_2849 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D RPE_0018 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RPE_0017 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RPE_0016 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RPE_0015 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RPE_0539 cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RPE_0538 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RPE_1341 cytochrome c, class I K08738 CYC; cytochrome c
D RPE_3768 cytochrome c, class I K08738 CYC; cytochrome c
D RPE_3971 Cache, type 2 domain protein K08738 CYC; cytochrome c
D RPE_1803 cache, type 2 K08738 CYC; cytochrome c
D RPE_0282 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RPE_0280 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RPE_0281 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RPE_0283 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RPE_0279 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RPE_4779 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RPE_4776 H+-transporting two-sector ATPase, B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RPE_4777 H+-transporting two-sector ATPase, B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RPE_4778 H+-transporting two-sector ATPase, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RPE_0044 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RPE_3281 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RPE_3041 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:rpe00710]
D RPE_0422 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RPE_1361 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RPE_2686 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RPE_1362 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RPE_4725 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RPE_4728 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RPE_4722 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPE_2685 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPE_2682 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RPE_2936 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RPE_1517 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_1518 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_2684 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_4238 Transketolase, central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_4729 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_1987 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RPE_0572 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RPE_2683 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D RPE_2593 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RPE_1642 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RPE_1791 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RPE_0819 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RPE_4405 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RPE_3275 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)))/Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RPE_0300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rpe00680]
D RPE_3139 Pyrrolo-quinoline quinone K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7]
D RPE_3138 extracellular solute-binding protein, family 3 K16254 mxaJ; mxaJ protein
D RPE_3137 cytochrome c, class I K16255 mxaG; cytochrome c-L
D RPE_3136 methanol dehydrogenase, beta subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7]
D RPE_3133 MxaA protein, putative K16256 mxaA; mxaA protein
D RPE_3132 von Willebrand factor, type A K16257 mxaC; mxaC protein
D RPE_3131 conserved hypothetical protein K16258 mxaK; mxaK protein
D RPE_3130 von Willebrand factor, type A K16259 mxaL; mxaL protein
D RPE_3129 MxaD protein, putative K16260 mxaD; mxaD protein
D RPE_0851 Pyrrolo-quinoline quinone K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D RPE_4679 glutathione-dependent formaldehyde-activating, GFA K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
D RPE_4678 Alcohol dehydrogenase, zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RPE_4680 Carboxylesterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RPE_4647 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RPE_4648 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RPE_4649 NADH dehydrogenase (ubiquinone), 24 kDa subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RPE_4645 formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D RPE_3861 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D RPE_2808 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPE_0897 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RPE_3720 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RPE_2607 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPE_1791 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RPE_0300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPE_4722 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPE_2685 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPE_2682 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RPE_2936 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RPE_0769 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D RPE_4144 NapC/NirT cytochrome c domain protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D RPE_1300 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D RPE_3162 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RPE_3863 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RPE_2388 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_4586 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_0069 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_0342 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPE_4160 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RPE_4161 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RPE_2185 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rpe00910]
D RPE_4597 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D RPE_4638 ABC-type nitrate transport system periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RPE_1265 ABC-type nitrate transport system periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RPE_4637 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D RPE_1264 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D RPE_1263 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RPE_4636 ABC transporter related K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RPE_1258 assimilatory nitrate reductase (NADH) alpha subunit apoprotein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D RPE_1261 assimilatory nitrate reductase (NADH) beta subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D RPE_1260 precorrin-3B synthase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D RPE_4071 nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D RPE_0621 cytochrome c oxidase, subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D RPE_0622 Nitric-oxide reductase K02305 norC; nitric oxide reductase subunit C
D RPE_3095 Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D RPE_4532 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RPE_3883 nitrogenase alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RPE_3188 oxidoreductase/nitrogenase, component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RPE_4531 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RPE_3881 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RPE_4533 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D RPE_3190 Nitrogenase K02588 nifH; nitrogenase iron protein NifH
D RPE_3884 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D RPE_3882 Nitrogenase K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1]
D RPE_3363 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RPE_0757 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RPE_2505 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPE_0683 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RPE_0767 sulfide dehydrogenase (flavoprotein) subunit SudA / sulfide dehydrogenase (flavoprotein) subunit SudB K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RPE_0682 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RPE_4635 cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D RPE_0341 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RPE_0718 Carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rpe00920]
D RPE_1760 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RPE_1768 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RPE_1759 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RPE_1769 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RPE_1770 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RPE_1758 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RPE_1771 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RPE_3192 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RPE_3205 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RPE_3194 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D RPE_3195 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RPE_3193 Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D RPE_0333 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RPE_1761 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RPE_0334 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPE_1762 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPE_4286 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RPE_1767 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RPE_3076 conserved hypothetical protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RPE_3077 conserved hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RPE_0849 conserved hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D RPE_3075 thiosulfate-binding protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D RPE_3074 sulfur compound chelating protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D RPE_3073 sulfate thiol esterase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D RPE_3072 sulfur dehydrogenase subunit SoxC K17225 soxC; sulfane dehydrogenase subunit SoxC
D RPE_3071 sulfur dehydrogenase subunit SoxD K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D RPE_1259 sulfite reductase (NADPH) alpha subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D RPE_1765 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RPE_3985 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RPE_3986 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RPE_3067 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RPE_3068 sulfide dehydrogenase (flavoprotein) K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RPE_2035 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RPE_3185 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPE_2312 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPE_2734 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RPE_2774 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RPE_3624 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RPE_4340 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RPE_4877 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RPE_4546 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RPE_2874 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RPE_4352 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RPE_1074 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RPE_0672 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RPE_3803 Enoyl-CoA hydratase/isomerase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rpe00061]
D RPE_0140 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RPE_2987 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RPE_2988 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RPE_0456 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RPE_3305 acyl carrier protein K02078 acpP; acyl carrier protein
D RPE_3307 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RPE_2826 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RPE_0256 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RPE_3304 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2021 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2020 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2271 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_0118 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_3306 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_3918 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_0257 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D RPE_2022 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RPE_2563 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RPE_4591 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_0255 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_3164 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_1783 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_3779 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4911 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_2253 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4227 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_1707 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rpe00071]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_3780 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RPE_4308 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_2248 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_0073 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_0119 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_3823 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_3619 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_4126 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_0889 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_4356 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RPE_1783 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_3779 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4911 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_2253 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4227 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_1707 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_1676 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RPE_4678 Alcohol dehydrogenase, zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RPE_3692 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RPE_3298 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RPE_2019 Alcohol dehydrogenase, zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rpe00561]
D RPE_3720 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_2083 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RPE_3774 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RPE_2825 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RPE_3375 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RPE_4829 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RPE_1992 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:rpe00564]
D RPE_0066 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RPE_1378 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RPE_3375 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RPE_4829 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RPE_1992 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RPE_0686 alpha/beta hydrolase fold K01048 pldB; lysophospholipase [EC:3.1.1.5]
D RPE_3536 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RPE_1805 Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D RPE_1807 Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D RPE_0347 ribosomal RNA adenine methylase transferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D RPE_1038 phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D RPE_3454 putative phospholipid N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D RPE_2558 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RPE_2798 CDP-diacylglycerol-choline O-phosphatidyltransferase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D RPE_2009 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RPE_2008 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RPE_3283 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D RPE_0925 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D RPE_4505 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
D RPE_4506 Methyltransferase type 12 K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rpe01040]
D RPE_0303 lipolytic enzyme, G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RPE_0406 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rpe00230]
D RPE_3760 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RPE_1281 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPE_4278 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3492 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_4148 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RPE_1430 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RPE_3340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RPE_4612 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RPE_3285 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RPE_1613 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RPE_1608 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RPE_1610 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RPE_3284 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RPE_4090 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RPE_4089 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RPE_0548 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RPE_1607 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RPE_1640 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RPE_0026 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RPE_1070 5'-Nucleotidase domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RPE_2703 exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RPE_1432 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RPE_3268 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RPE_3287 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RPE_0354 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RPE_2299 Xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D RPE_3215 molybdopterin dehydrogenase, FAD-binding protein K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D RPE_3262 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPE_0053 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPE_0636 IMP dehydrogenase/GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D RPE_3301 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RPE_2501 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RPE_3177 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RPE_3176 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RPE_2630 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RPE_4393 metal dependent phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RPE_3026 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RPE_3733 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RPE_3280 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RPE_3273 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RPE_3000 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RPE_4397 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RPE_0894 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RPE_4549 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RPE_4141 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RPE_4774 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RPE_3565 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RPE_2885 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RPE_0333 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RPE_1761 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RPE_0334 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPE_1762 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPE_3732 urease. Metallo peptidase. MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RPE_3734 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RPE_3735 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:rpe00240]
D RPE_3960 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RPE_0979 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RPE_3373 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RPE_3374 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RPE_4389 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RPE_0721 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RPE_4822 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RPE_0345 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RPE_2555 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RPE_3287 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RPE_2885 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RPE_4480 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RPE_0379 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RPE_2595 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RPE_0446 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RPE_1070 5'-Nucleotidase domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RPE_2703 exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RPE_4774 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RPE_4768 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RPE_3176 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RPE_4876 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RPE_2501 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RPE_3177 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RPE_4393 metal dependent phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RPE_2865 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RPE_0466 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RPE_4149 putative thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RPE_2149 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RPE_2150 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rpe00250]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_4401 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RPE_0582 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RPE_0897 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RPE_0034 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RPE_4842 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RPE_4141 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RPE_1640 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RPE_3373 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RPE_0222 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RPE_0683 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RPE_0767 sulfide dehydrogenase (flavoprotein) subunit SudA / sulfide dehydrogenase (flavoprotein) subunit SudB K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RPE_0682 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RPE_4317 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RPE_2505 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPE_3960 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RPE_0979 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RPE_1610 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RPE_2786 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RPE_3340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rpe00260]
D RPE_0158 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RPE_0484 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RPE_2937 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RPE_4129 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D RPE_4759 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RPE_1630 aromatic amino acid beta-eliminating lyase/threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RPE_2808 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPE_0897 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RPE_3720 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RPE_0342 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPE_4160 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RPE_4161 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RPE_2185 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RPE_4787 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RPE_1359 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RPE_0041 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPE_1595 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RPE_1597 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_1596 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RPE_2009 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RPE_2188 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RPE_1467 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RPE_0455 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RPE_0454 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RPE_0770 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rpe00270]
D RPE_3185 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPE_2312 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPE_2734 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RPE_2774 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RPE_3624 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RPE_2728 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RPE_3773 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RPE_3169 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RPE_2301 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RPE_4204 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RPE_4907 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D RPE_1432 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RPE_4906 translation initiation factor 2B subunit I family (IF-2BI) K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D RPE_3678 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K25035 rlp; S-methyl-5-thioribulose 1-phosphate isomerase [EC:5.3.3.23]
D RPE_3677 Cupin 2, conserved barrel domain protein K01767 cupin; S-methyl-1-thioxylulose 5-phosphate methylthiotransferase [EC:2.8.4.6]
D RPE_3254 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPE_4203 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RPE_0158 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RPE_0484 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RPE_2937 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RPE_4340 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RPE_2853 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RPE_1365 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RPE_1723 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RPE_4877 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RPE_1423 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPE_0677 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RPE_0359 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_2035 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RPE_2871 pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D RPE_0300 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPE_4160 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RPE_4161 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rpe00280]
D RPE_1423 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_4308 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_2248 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_0073 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_0119 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_3823 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_3619 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_4126 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_0889 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RPE_4310 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_3439 Carbamoyl-phosphate synthase L chain, ATP-binding protein K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RPE_3541 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RPE_2539 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RPE_1852 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPE_1854 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPE_3223 Methylmalonyl-CoA mutase-like protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RPE_3224 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RPE_1979 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RPE_2387 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RPE_2382 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_0473 AMP-dependent synthetase and ligase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RPE_0915 aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RPE_2911 Carbamoyl-phosphate synthase L chain, ATP-binding protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RPE_2912 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RPE_2910 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RPE_4078 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RPE_4077 butyryl-CoA:acetate CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rpe00290]
D RPE_2188 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RPE_1467 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RPE_0332 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RPE_0339 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RPE_0480 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RPE_2004 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_2187 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_1801 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_4300 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_2189 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RPE_2195 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RPE_4363 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RPE_1423 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPE_2002 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RPE_2209 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rpe00300]
D RPE_2937 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RPE_0158 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RPE_0484 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RPE_3032 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RPE_3527 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RPE_0343 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RPE_0651 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RPE_4884 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RPE_2014 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RPE_0653 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RPE_0321 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RPE_4840 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RPE_2102 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RPE_2103 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rpe00310]
D RPE_0296 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_4356 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0222 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RPE_2928 L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D RPE_2252 protein of unknown function DUF849 K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D RPE_2761 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RPE_1682 D-amino-acid dehydrogenase K26064 amaD; D-lysine oxidase
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rpe00220]
D RPE_4883 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RPE_0034 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RPE_4842 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RPE_2678 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RPE_1219 urea amidolyase related protein K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D RPE_1220 Amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D RPE_3732 urease. Metallo peptidase. MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RPE_3734 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RPE_3735 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RPE_1610 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RPE_2505 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_0148 glutamate N-acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RPE_0647 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RPE_2944 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RPE_4884 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rpe00330]
D RPE_0109 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RPE_3217 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RPE_3216 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D RPE_3166 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RPE_4802 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_0041 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPE_3704 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RPE_2678 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RPE_1819 aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RPE_1427 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RPE_4317 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RPE_0549 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RPE_0266 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RPE_3706 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_2761 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:rpe00340]
D RPE_0871 ATP phosphoribosyltransferase (homohexameric) / ATP phosphoribosyltransferase regulatory subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RPE_0872 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RPE_0754 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RPE_0365 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RPE_2349 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RPE_0367 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RPE_0368 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RPE_0366 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RPE_0370 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RPE_4342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPE_0706 histidinol-phosphate phosphatase, putative K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D RPE_4484 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_0041 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPE_1618 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:rpe00350]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_4342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPE_0912 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RPE_0913 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RPE_4837 Pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RPE_0041 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPE_4678 Alcohol dehydrogenase, zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RPE_3692 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RPE_3298 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RPE_2019 Alcohol dehydrogenase, zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RPE_0752 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D RPE_1802 2-dehydro-3-deoxyglucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D RPE_0222 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RPE_2915 Tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
D RPE_1446 fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rpe00360]
D RPE_4837 Pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RPE_0041 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPE_3181 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RPE_0981 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RPE_0996 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RPE_0997 phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D RPE_0988 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D RPE_0989 phenylacetate-CoA oxygenase, PaaH subunit K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D RPE_0990 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D RPE_0991 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D RPE_0992 phenylacetate-CoA oxygenase/reductase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D RPE_0998 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RPE_1703 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RPE_0994 phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_4847 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_4342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPE_2761 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RPE_0253 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RPE_3704 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RPE_1676 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RPE_0909 monooxygenase, FAD-binding protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
C 00380 Tryptophan metabolism [PATH:rpe00380]
D RPE_0296 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_4356 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4837 Pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RPE_0041 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_3704 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RPE_0253 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rpe00400]
D RPE_1991 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RPE_0144 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RPE_2986 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RPE_4171 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RPE_0143 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RPE_0444 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RPE_4589 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RPE_4447 anthranilate synthase, component II / anthranilate synthase, component I K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D RPE_2591 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RPE_0453 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RPE_2590 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RPE_0455 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RPE_0454 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RPE_0770 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RPE_4343 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D RPE_3770 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_4342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rpe00410]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_3413 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RPE_0915 aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_2382 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rpe00430]
D RPE_1368 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RPE_0024 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RPE_3201 thiamine pyrophosphate enzyme TPP binding domain protein K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D RPE_3863 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RPE_3162 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RPE_3204 conserved hypothetical protein K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81]
C 00440 Phosphonate and phosphinate metabolism [PATH:rpe00440]
D RPE_3108 phosphonate metabolism K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D RPE_3110 phosphonate metabolism PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D RPE_3109 phosphonate metabolism K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D RPE_3105 phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D RPE_3104 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RPE_3117 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RPE_3107 phosphonate metabolism PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D RPE_2869 putative hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rpe00450]
D RPE_2728 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RPE_3773 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RPE_3169 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RPE_2301 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RPE_2964 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RPE_3186 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RPE_4494 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RPE_1478 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RPE_3643 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RPE_3964 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RPE_0333 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RPE_1761 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RPE_0334 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPE_1762 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPE_2867 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rpe00460]
D RPE_4619 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RPE_1368 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RPE_0024 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RPE_2808 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPE_4597 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:rpe00470]
D RPE_3334 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RPE_2761 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RPE_2113 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPE_1610 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RPE_1635 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RPE_2105 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RPE_1470 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RPE_2871 pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D RPE_0321 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RPE_4840 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rpe00480]
D RPE_1368 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RPE_0024 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RPE_4828 ChaC family protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D RPE_3039 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RPE_3038 urea amidolyase related protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D RPE_0677 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RPE_0359 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RPE_3291 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RPE_3758 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RPE_0022 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_1562 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_0518 membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_4164 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_4177 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_0254 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_0503 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_0675 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_4327 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_3417 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_1989 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D RPE_1602 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RPE_3709 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RPE_3710 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RPE_3703 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RPE_2397 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RPE_1706 Redoxin domain protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RPE_3166 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RPE_4802 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D RPE_2672 Tetratricopeptide TPR_2 repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rpe00540]
D RPE_2564 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RPE_2117 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RPE_2562 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RPE_2588 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RPE_2565 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RPE_2566 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RPE_0881 lipid-A-disaccharide synthase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RPE_0696 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RPE_2601 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RPE_4240 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RPE_3769 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RPE_0880 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RPE_2018 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RPE_1506 sugar isomerase family protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RPE_1453 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RPE_1450 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RPE_1507 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RPE_1452 ADP-glyceromanno-heptose 6-epimerase precursor K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RPE_1449 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RPE_1451 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RPE_4329 glycosyl transferase, group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rpe00541]
D RPE_0687 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPE_1448 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_3508 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_4271 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1081 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1510 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_3197 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_1514 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPE_3505 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_4206 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1120 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1513 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPE_1454 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RPE_1516 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPE_4256 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RPE_4253 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RPE_4254 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RPE_4272 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RPE_4261 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RPE_4260 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RPE_2785 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:rpe00550]
D RPE_4488 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RPE_2110 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RPE_2108 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RPE_2105 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RPE_2102 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RPE_2113 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPE_2103 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RPE_2557 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RPE_0504 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RPE_2104 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RPE_2107 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RPE_0175 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RPE_1880 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_2977 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_0224 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_2723 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RPE_2101 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RPE_2864 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:rpe00552]
D RPE_0504 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RPE_3494 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RPE_1096 anti-sigma-factor antagonist K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rpe00543]
D RPE_4259 membrane bound O-acyl transferase, MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RPE_1116 membrane bound O-acyl transferase, MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RPE_3185 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPE_2312 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPE_3502 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
D RPE_1111 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
D RPE_1114 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rpe00730]
D RPE_2069 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RPE_1463 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RPE_2969 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_4521 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_2073 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RPE_1067 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RPE_2071 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RPE_2070 Thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RPE_4721 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RPE_2814 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RPE_4500 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RPE_0033 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RPE_3565 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rpe00740]
D RPE_4357 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RPE_2810 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RPE_2812 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RPE_1429 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RPE_2811 Lumazine-binding protein K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RPE_1410 riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RPE_2232 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D RPE_3760 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RPE_4743 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rpe00750]
D RPE_4594 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RPE_4161 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RPE_3296 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RPE_3025 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RPE_4759 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rpe00760]
D RPE_4401 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RPE_4400 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RPE_4402 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RPE_1070 5'-Nucleotidase domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RPE_2703 exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RPE_0267 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RPE_2885 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RPE_4815 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RPE_0579 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RPE_1993 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RPE_2754 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RPE_2919 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RPE_2359 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RPE_4097 NAD(P) transhydrogenase subunit alpha part K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RPE_4098 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RPE_4096 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RPE_0222 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rpe00770]
D RPE_2004 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_2187 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_1801 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_4300 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPE_2189 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RPE_2195 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RPE_4363 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RPE_3348 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RPE_0019 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RPE_1954 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RPE_3413 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RPE_0364 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D RPE_0467 Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RPE_2885 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RPE_2766 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RPE_0378 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RPE_3024 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RPE_1423 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rpe00780]
D RPE_0256 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RPE_3304 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2021 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2020 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2271 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_0118 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_3306 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_3918 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_2022 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RPE_2563 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RPE_4591 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_0255 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_3164 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_3400 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RPE_3402 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RPE_3401 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RPE_2208 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D RPE_2537 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rpe00785]
D RPE_3436 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RPE_2752 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2612 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RPE_2614 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RPE_2616 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPE_0297 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RPE_0296 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RPE_1595 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RPE_1597 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RPE_1596 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rpe00790]
D RPE_0796 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RPE_2348 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RPE_0033 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RPE_1856 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RPE_1855 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RPE_1857 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RPE_2177 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RPE_0457 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RPE_0113 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RPE_4357 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RPE_3943 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RPE_2708 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RPE_0946 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RPE_2884 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RPE_2606 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RPE_1984 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RPE_2589 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RPE_0927 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RPE_4429 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RPE_2572 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RPE_1661 molybdenum cofactor cytidylyltransferase / molybdopterin molybdochelatase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D RPE_3728 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rpe00670]
D RPE_2177 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RPE_0047 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RPE_2808 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPE_3285 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RPE_0026 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RPE_0655 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RPE_1597 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RPE_3773 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RPE_2149 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RPE_2150 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RPE_4219 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RPE_3772 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RPE_4775 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rpe00860]
D RPE_4787 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RPE_1359 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RPE_2568 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPE_3009 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RPE_0277 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RPE_1305 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RPE_4220 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RPE_0064 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RPE_1312 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RPE_1317 coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RPE_3937 coproporphyrinogen III oxidase, anaerobic K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RPE_0381 conserved hypothetical protein 701 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RPE_4807 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RPE_1763 uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D RPE_2217 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RPE_4753 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RPE_2849 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D RPE_2224 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RPE_2223 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RPE_2219 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RPE_2220 cobalamin biosynthesis protein G; CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RPE_2230 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D RPE_2222 precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RPE_2221 precorrin-6Y C5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RPE_2225 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RPE_2218 cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RPE_2236 hydrogenobyrinic acid a,c-diamide cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RPE_0135 hydrogenobyrinic acid a,c-diamide cobaltochelatase K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D RPE_0132 cobalt chelatase, pCobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D RPE_4850 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RPE_2237 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RPE_2238 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RPE_3122 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RPE_2239 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RPE_2240 aminotransferase K02225 cobC1; cobalamin biosynthesis protein CobC
D RPE_2234 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RPE_3123 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RPE_3848 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RPE_3845 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RPE_2229 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RPE_3847 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RPE_1349 hydrogenobyrinic acid a,c-diamide cobaltochelatase K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RPE_1307 protoporphyrin IX magnesium-chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RPE_1306 protoporphyrin IX magnesium-chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RPE_1351 magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D RPE_3935 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D RPE_1357 Mg-protoporphyrin IX monomethyl ester (oxidative) cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D RPE_3936 bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D RPE_1350 light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D RPE_1347 light-independent protochlorophyllide reductase, N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D RPE_1348 light-independent protochlorophyllide reductase, B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D RPE_1336 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D RPE_1327 chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D RPE_1328 chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D RPE_1329 chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D RPE_1346 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D RPE_1326 chlorophyll synthesis pathway, BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D RPE_1338 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RPE_0820 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D RPE_1344 Heme oxygenase (decyclizing) K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D RPE_2055 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rpe00130]
D RPE_3801 thioesterase superfamily protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D RPE_0875 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RPE_4742 3-octaprenyl-4hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RPE_4743 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RPE_0157 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RPE_2797 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RPE_0407 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RPE_0470 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RPE_0710 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rpe00900]
D RPE_1067 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RPE_2559 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RPE_2755 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D RPE_4419 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RPE_0183 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RPE_4130 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RPE_1816 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4743 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RPE_0176 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RPE_1324 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RPE_4416 Farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RPE_2557 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RPE_1338 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:rpe00909]
D RPE_4468 squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rpe00906]
D RPE_1316 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RPE_2904 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RPE_1315 amine oxidase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RPE_1320 hydroxyneurosporene synthase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D RPE_1323 amine oxidase K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D RPE_1325 hydroxyneurosporene-O-methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rpe00907]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_0023 short-chain dehydrogenase/reductase SDR K13775 atuG; citronellol/citronellal dehydrogenase
D RPE_2249 acyl-CoA dehydrogenase domain protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D RPE_2255 Carbamoyl-phosphate synthase L chain, ATP-binding protein K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D RPE_2254 Propionyl-CoA carboxylase K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D RPE_2910 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RPE_1517 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_1518 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_2684 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_4238 Transketolase, central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPE_4729 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rpe00523]
D RPE_1516 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPE_4256 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RPE_1521 DegT/DnrJ/EryC1/StrS aminotransferase K16436 evaB; dTDP-3-amino-2,3,6-trideoxy-4-keto-D-glucose/dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose/dTDP-2,6-dideoxy-D-kanosamine transaminase [EC:2.6.1.- 2.6.1.106]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:rpe01055]
D RPE_1516 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPE_1521 DegT/DnrJ/EryC1/StrS aminotransferase K16436 evaB; dTDP-3-amino-2,3,6-trideoxy-4-keto-D-glucose/dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose/dTDP-2,6-dideoxy-D-kanosamine transaminase [EC:2.6.1.- 2.6.1.106]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rpe00946]
D RPE_4619 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RPE_1865 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:rpe00332]
D RPE_0549 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RPE_0266 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rpe00261]
D RPE_0333 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RPE_1761 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RPE_0334 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPE_1762 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPE_0158 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RPE_0484 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RPE_3032 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RPE_3527 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RPE_0343 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rpe00521]
D RPE_4618 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RPE_1281 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPE_4278 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_3492 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RPE_4719 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RPE_0878 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RPE_1516 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPE_4256 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RPE_4618 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D RPE_1516 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rpe00401]
D RPE_4343 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_4342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D RPE_3307 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RPE_2271 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_0118 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_3306 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_3918 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_4591 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_0255 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_3164 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RPE_3305 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rpe00999]
D RPE_4204 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RPE_4171 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RPE_4619 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rpe00362]
D RPE_1653 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RPE_0248 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D RPE_0935 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RPE_4908 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D RPE_4839 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RPE_0750 Protocatechuate 4,5-dioxygenase K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D RPE_0751 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D RPE_0752 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D RPE_0749 amidohydrolase 2 K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D RPE_0745 methylitaconate delta2-delta3-isomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D RPE_0746 amidohydrolase 2 K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D RPE_0747 Dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D RPE_3808 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D RPE_0592 benzoate-CoA ligase K04105 hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25]
D RPE_3801 thioesterase superfamily protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D RPE_0591 4-hydroxybenzoyl-CoA reductase gamma subunit K04107 hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma [EC:1.1.7.1]
D RPE_0590 4-hydroxybenzoyl-CoA reductase alpha subunit K04108 hcrA; 4-hydroxybenzoyl-CoA reductase subunit alpha [EC:1.1.7.1]
D RPE_0589 4-hydroxybenzoyl-CoA reductase beta subunit K04109 hcrB; 4-hydroxybenzoyl-CoA reductase subunit beta [EC:1.1.7.1]
D RPE_0604 benzoate-CoA ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D RPE_0608 benzoyl-CoA reductase (4-electron) gamma subunit K04112 bcrC; benzoyl-CoA reductase subunit C [EC:1.3.7.8]
D RPE_0607 benzoyl-CoA reductase (4-electron) beta subunit K04113 bcrB; benzoyl-CoA reductase subunit B [EC:1.3.7.8]
D RPE_0606 benzoyl-CoA reductase (4-electron) alpha subunit K04114 bcrA; benzoyl-CoA reductase subunit A [EC:1.3.7.8]
D RPE_0605 benzoyl-CoA reductase (4-electron) delta subunit K04115 bcrD; benzoyl-CoA reductase subunit D [EC:1.3.7.8]
D RPE_0614 AMP-dependent synthetase and ligase K04116 aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
D RPE_0613 acyl-CoA dehydrogenase domain protein K04117 aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
D RPE_0615 cyclohex-1-ene 1-carbonyl-CoA hydratase K07534 badK; cyclohex-1-ene-1-carboxyl-CoA hydratase [EC:4.2.1.-]
D RPE_0611 2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D RPE_0612 2-ketocyclohexane 1-carbonyl-CoA hydrolase K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RPE_3780 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RPE_4356 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_4847 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0584 benzoyl-CoA oxygenase, component B K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208]
D RPE_0585 2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
C 00627 Aminobenzoate degradation [PATH:rpe00627]
D RPE_3704 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RPE_3437 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RPE_0604 benzoate-CoA ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D RPE_1253 thiamine pyrophosphate enzyme TPP binding domain protein K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D RPE_4305 thiamine pyrophosphate enzyme domain protein TPP-binding protein K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D RPE_0592 benzoate-CoA ligase K04105 hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25]
D RPE_0591 4-hydroxybenzoyl-CoA reductase gamma subunit K04107 hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma [EC:1.1.7.1]
D RPE_0590 4-hydroxybenzoyl-CoA reductase alpha subunit K04108 hcrA; 4-hydroxybenzoyl-CoA reductase subunit alpha [EC:1.1.7.1]
D RPE_0589 4-hydroxybenzoyl-CoA reductase beta subunit K04109 hcrB; 4-hydroxybenzoyl-CoA reductase subunit beta [EC:1.1.7.1]
D RPE_4743 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RPE_3227 AMP-dependent synthetase and ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D RPE_3229 NADH:flavin oxidoreductase/NADH oxidase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D RPE_0750 Protocatechuate 4,5-dioxygenase K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D RPE_0751 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D RPE_0752 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D RPE_0749 amidohydrolase 2 K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:rpe00364]
D RPE_0950 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RPE_4908 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rpe00625]
D RPE_3298 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RPE_2019 Alcohol dehydrogenase, zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RPE_4678 Alcohol dehydrogenase, zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RPE_3692 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RPE_2260 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RPE_3882 Nitrogenase K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1]
D RPE_3188 oxidoreductase/nitrogenase, component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RPE_4531 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RPE_3881 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RPE_4533 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D RPE_3190 Nitrogenase K02588 nifH; nitrogenase iron protein NifH
D RPE_3884 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D RPE_4532 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RPE_3883 nitrogenase alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RPE_3139 Pyrrolo-quinoline quinone K14028 mdh1; methanol dehydrogenase (cytochrome c) subunit 1 [EC:1.1.2.7]
D RPE_3136 methanol dehydrogenase, beta subunit K14029 mdh2; methanol dehydrogenase (cytochrome c) subunit 2 [EC:1.1.2.7]
D RPE_2935 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rpe00361]
D RPE_0950 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RPE_4908 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D RPE_2935 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:rpe00623]
D RPE_0950 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RPE_4908 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation
D RPE_0935 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:rpe00633]
D RPE_1385 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D RPE_1232 nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RPE_1231 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RPE_1230 nickel-dependent hydrogenase, large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D RPE_1229 NADH ubiquinone oxidoreductase, 20 kDa subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:rpe00643]
D RPE_0912 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RPE_0913 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RPE_3704 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation [PATH:rpe00791]
D RPE_1220 Amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D RPE_1219 urea amidolyase related protein K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D RPE_3732 urease. Metallo peptidase. MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RPE_3734 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RPE_3735 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:rpe00930]
D RPE_2028 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RPE_1836 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D RPE_0935 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:rpe00626]
D RPE_3298 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RPE_2019 Alcohol dehydrogenase, zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RPE_4678 Alcohol dehydrogenase, zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RPE_3692 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D RPE_0750 Protocatechuate 4,5-dioxygenase K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D RPE_0751 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rpe03020]
D RPE_3597 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RPE_3596 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RPE_3562 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RPE_3027 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rpe03010]
D RPE_0449 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D RPE_2553 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D RPE_3580 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D RPE_1631 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D RPE_3569 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D RPE_3309 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D RPE_3590 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D RPE_3572 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D RPE_2858 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D RPE_3587 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D RPE_3563 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D RPE_3591 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D RPE_3564 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D RPE_3573 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D RPE_0193 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D RPE_0328 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D RPE_3577 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D RPE_3310 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D RPE_3582 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D RPE_4920 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D RPE_4091 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D RPE_3606 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D RPE_3583 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D RPE_3586 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D RPE_3585 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D RPE_3574 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D RPE_3571 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D RPE_3598 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D RPE_3315 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D RPE_3599 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D RPE_3607 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D RPE_2857 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D RPE_3576 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D RPE_3567 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D RPE_3579 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D RPE_3561 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D RPE_3570 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D RPE_0331 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D RPE_0497 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D RPE_0556 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D RPE_3581 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D RPE_3584 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D RPE_3575 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D RPE_1437 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D RPE_0555 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D RPE_0129 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D RPE_3578 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D RPE_3568 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D RPE_0665 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D RPE_0174 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D RPE_3383 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D RPE_0642 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D RPE_0498 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D RPE_4115 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D RPE_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPE_R0063 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPE_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPE_R0060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPE_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPE_R0059 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rpe00970]
D RPE_R0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPE_R0061 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPE_R0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPE_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPE_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0068 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0048 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0038 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RPE_R0033 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RPE_R0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RPE_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RPE_R0052 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RPE_R0018 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RPE_R0042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RPE_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPE_R0070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPE_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPE_R0054 tRNA-His K14226 tRNA-His; tRNA His
D RPE_R0013 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RPE_R0062 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RPE_R0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RPE_R0039 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RPE_R0019 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPE_R0053 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPE_R0055 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPE_R0065 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RPE_R0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPE_R0064 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPE_R0041 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPE_R0009 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPE_R0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPE_R0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPE_R0067 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPE_R0002 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPE_R0030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPE_R0066 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPE_R0049 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RPE_R0051 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RPE_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPE_R0056 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPE_R0011 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPE_2568 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPE_3358 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RPE_1796 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RPE_3356 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RPE_3362 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RPE_2569 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RPE_1598 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RPE_3276 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RPE_4411 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RPE_4409 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RPE_2337 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RPE_2700 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RPE_1998 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RPE_2867 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RPE_0655 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RPE_2750 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RPE_0390 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RPE_1414 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RPE_0736 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RPE_2691 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RPE_2544 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RPE_0914 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RPE_0496 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RPE_0493 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RPE_2972 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RPE_0216 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rpe03060]
D RPE_3566 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RPE_3609 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RPE_2594 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D RPE_2907 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RPE_2906 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D RPE_2908 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D RPE_0644 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPE_0146 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPE_4582 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPE_0376 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D RPE_0327 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RPE_R0069 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D RPE_0318 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RPE_2696 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RPE_2697 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D RPE_2698 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D RPE_3023 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RPE_1415 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rpe04122]
D RPE_2969 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_4521 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_2035 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RPE_3727 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RPE_1039 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RPE_0927 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RPE_1984 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RPE_0926 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein
D RPE_0243 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RPE_2589 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RPE_4429 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RPE_2072 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rpe03018]
D RPE_0273 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RPE_0276 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RPE_2979 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RPE_2607 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPE_0192 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RPE_3742 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RPE_3380 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RPE_0835 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RPE_4912 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RPE_0382 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RPE_2538 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RPE_0349 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RPE_2283 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_0861 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_2762 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RPE_3281 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RPE_3041 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RPE_0944 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rpe03030]
D RPE_0377 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPE_2550 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPE_4813 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPE_2866 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPE_0388 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPE_3290 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPE_3317 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RPE_1056 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RPE_2888 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RPE_4128 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RPE_4424 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RPE_4821 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPE_2121 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rpe03410]
D RPE_0488 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RPE_4433 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RPE_2751 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RPE_0471 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RPE_4855 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RPE_4391 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RPE_1823 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPE_3029 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPE_4422 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPE_2622 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPE_3647 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPE_0396 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPE_4821 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPE_2934 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RPE_2121 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rpe03420]
D RPE_2790 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RPE_2890 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D RPE_4191 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RPE_0924 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RPE_2137 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_2881 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_4057 superfamily I DNA and RNA helicases-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_4821 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPE_2121 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rpe03430]
D RPE_0246 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RPE_1420 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RPE_2137 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_2881 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_4057 superfamily I DNA and RNA helicases-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_2473 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RPE_4617 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RPE_1068 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RPE_2934 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RPE_2888 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RPE_2550 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPE_4813 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPE_0388 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPE_2866 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPE_0377 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPE_3290 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RPE_2121 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rpe03440]
D RPE_2934 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RPE_2888 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RPE_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RPE_3018 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RPE_4811 recombination protein RecR K06187 recR; recombination protein RecR
D RPE_1594 RecA protein K03553 recA; recombination protein RecA
D RPE_4821 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPE_4769 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RPE_4767 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RPE_4770 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RPE_2788 DEAD/DEAH box helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RPE_2475 conserved hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RPE_2550 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPE_4813 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPE_0388 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPE_2866 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPE_0377 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPE_3290 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RPE_0286 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:rpe03450]
D RPE_0101 Ku domain protein K10979 ku; DNA end-binding protein Ku
D RPE_3725 Ku domain protein K10979 ku; DNA end-binding protein Ku
D RPE_3724 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D RPE_2672 Tetratricopeptide TPR_2 repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rpe02010]
D RPE_1760 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RPE_1768 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RPE_1759 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RPE_1769 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RPE_1770 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RPE_1758 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RPE_1771 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RPE_4638 ABC-type nitrate transport system periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RPE_1265 ABC-type nitrate transport system periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RPE_4637 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D RPE_1264 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D RPE_1263 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RPE_4636 ABC transporter related K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RPE_3192 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RPE_3205 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RPE_3194 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D RPE_3195 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RPE_0764 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RPE_0763 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D RPE_0762 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RPE_4073 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D RPE_4074 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D RPE_2015 extracellular solute-binding protein, family 1 K11073 potF; putrescine transport system substrate-binding protein
D RPE_4081 binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein
D RPE_4082 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D RPE_4083 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RPE_2201 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D RPE_2202 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RPE_3687 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RPE_1739 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RPE_1473 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RPE_1471 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RPE_1737 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RPE_1738 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RPE_1472 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RPE_1384 extracellular solute-binding protein, family 1 K17321 glpV; glycerol transport system substrate-binding protein
D RPE_1381 binding-protein-dependent transport systems inner membrane component K17322 glpP; glycerol transport system permease protein
D RPE_1382 binding-protein-dependent transport systems inner membrane component K17323 glpQ; glycerol transport system permease protein
D RPE_1379 ABC transporter related K17324 glpS; glycerol transport system ATP-binding protein
D RPE_1380 ABC transporter related K17325 glpT; glycerol transport system ATP-binding protein
D RPE_0440 extracellular solute-binding protein, family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RPE_0544 extracellular solute-binding protein, family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RPE_0438 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RPE_0437 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RPE_0436 ABC transporter related K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RPE_2451 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein
D RPE_4891 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RPE_4890 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D RPE_4889 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D RPE_4888 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RPE_3114 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RPE_2051 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RPE_2048 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RPE_3112 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RPE_3113 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RPE_2049 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RPE_2050 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RPE_3115 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RPE_2729 cationic amino acid ABC transporter, periplasmic binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RPE_0535 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RPE_2730 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein
D RPE_2731 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D RPE_2732 ABC transporter related K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RPE_3786 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3787 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1693 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3053 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3800 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4231 putative branched-chain amino acid ABC transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4221 ABC transporter, periplasmic branched chain amino acid binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1647 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4215 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0999 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0848 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0546 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0593 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1390 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3211 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3789 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0264 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3555 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3788 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3854 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1651 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1694 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3052 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3784 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3795 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4213 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4222 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4229 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3853 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1000 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_0594 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1387 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3209 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_0595 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3796 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3208 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1001 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1386 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1650 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1695 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_3051 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_3785 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4212 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4223 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4230 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1649 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1696 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3055 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4224 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3782 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4226 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3851 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1002 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1389 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4211 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1003 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1388 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1648 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1697 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_0596 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3207 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3054 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3783 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3797 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3850 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4210 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4225 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4232 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3180 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D RPE_3182 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D RPE_3183 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D RPE_3184 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D RPE_4602 amide-UreA binding protein K11959 urtA; urea transport system substrate-binding protein
D RPE_3741 branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor K11959 urtA; urea transport system substrate-binding protein
D RPE_4601 inner-membrane translocator K11960 urtB; urea transport system permease protein
D RPE_3740 inner-membrane translocator K11960 urtB; urea transport system permease protein
D RPE_4600 inner-membrane translocator K11961 urtC; urea transport system permease protein
D RPE_3739 inner-membrane translocator K11961 urtC; urea transport system permease protein
D RPE_3738 ABC transporter related K11962 urtD; urea transport system ATP-binding protein
D RPE_4599 ABC transporter related K11962 urtD; urea transport system ATP-binding protein
D RPE_3737 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D RPE_4598 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D RPE_3766 extracellular solute-binding protein, family 5 K13893 yejA; microcin C transport system substrate-binding protein
D RPE_3767 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RPE_3765 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D RPE_3764 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D RPE_3761 ABC transporter related K13896 yejF; microcin C transport system ATP-binding protein
D RPE_2840 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RPE_2838 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein
D RPE_2837 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein
D RPE_2839 ABC transporter related K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RPE_1970 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D RPE_4294 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D RPE_4292 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RPE_1968 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RPE_4291 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RPE_4295 conserved hypothetical protein K10094 cbiK; nickel transport protein
D RPE_1971 ABC-type Co2+ transport system, periplasmic component K10094 cbiK; nickel transport protein
D RPE_1969 conserved hypothetical protein K16915 cbiL; nickel transport protein
D RPE_4293 conserved hypothetical protein K16915 cbiL; nickel transport protein
D RPE_4249 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D RPE_4248 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RPE_2545 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D RPE_3953 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D RPE_2546 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RPE_3952 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RPE_0314 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D
D RPE_0313 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D RPE_0312 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D RPE_0311 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RPE_3292 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D RPE_3293 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D RPE_0429 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RPE_3098 nitrous oxide metabolic protein K19341 nosY; Cu-processing system permease protein
D RPE_3097 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein
D RPE_4831 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D RPE_4832 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RPE_1447 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RPE_1085 type I secretion system ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D RPE_2007 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RPE_3511 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RPE_1008 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RPE_4689 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D RPE_0887 SbmABacA family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rpe02060]
D RPE_0825 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D RPE_0824 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RPE_0159 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RPE_0432 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rpe03070]
D RPE_2748 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RPE_1086 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D
D RPE_1085 type I secretion system ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D RPE_2669 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D RPE_2662 type II secretion system protein K02455 gspF; general secretion pathway protein F
D RPE_2661 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D RPE_2660 putative general secretion pathway protein H precursor K02457 gspH; general secretion pathway protein H
D RPE_2667 hypothetical protein K02460 gspK; general secretion pathway protein K
D RPE_2666 Fimbrial assembly family protein K02461 gspL; general secretion pathway protein L
D RPE_2665 hypothetical protein K02462 gspM; general secretion pathway protein M
D RPE_2663 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RPE_2907 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RPE_2906 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D RPE_3609 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RPE_2594 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D RPE_3566 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RPE_2908 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D RPE_0644 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPE_0146 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPE_4582 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPE_0318 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RPE_0376 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D RPE_0327 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RPE_2696 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RPE_2697 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D RPE_2698 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D RPE_4026 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rpe02020]
D RPE_4892 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RPE_4886 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RPE_0033 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RPE_2451 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein
D RPE_4891 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RPE_1426 periplasmic sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RPE_1425 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RPE_1939 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RPE_2181 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RPE_2740 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D RPE_2741 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D RPE_2742 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D RPE_4659 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D RPE_4658 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D RPE_1165 flagellin domain protein K02406 fliC; flagellin
D RPE_0782 flagellin domain protein K02406 fliC; flagellin
D RPE_4499 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_1523 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_1525 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_1149 chemotaxis protein K02556 motA; chemotaxis protein MotA
D RPE_2010 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D RPE_4627 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RPE_4628 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RPE_4624 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RPE_4625 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RPE_4626 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RPE_4144 NapC/NirT cytochrome c domain protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D RPE_1955 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D RPE_2147 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D RPE_2146 protein of unknown function DUF1468 K07794 tctB; putative tricarboxylic transport membrane protein
D RPE_1956 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D RPE_1957 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein
D RPE_2148 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein
D RPE_2849 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D RPE_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RPE_0822 periplasmic sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RPE_0821 two component transcriptional regulator, winged helix family K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RPE_3372 vanX D-Ala-D-Ala dipeptidase. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RPE_3427 citrate lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D RPE_3428 citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D RPE_3429 citrate lyase, beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RPE_0340 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RPE_3430 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D RPE_3431 Holo-ACP synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D RPE_3432 Triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D RPE_3514 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RPE_3141 putative signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RPE_2819 signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RPE_3142 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RPE_1624 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D RPE_1882 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D RPE_3748 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D RPE_4298 putative pilus assembly protein cpaB K02279 cpaB; pilus assembly protein CpaB
D RPE_3751 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D RPE_3753 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D RPE_3754 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RPE_3755 type II secretion system protein K12510 tadB; tight adherence protein B
D RPE_3756 type II secretion system protein K12511 tadC; tight adherence protein C
D RPE_0260 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RPE_2506 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D RPE_2757 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RPE_2758 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RPE_2505 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPE_2759 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RPE_2760 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RPE_3885 transcriptional regulator, NifA subfamily, Fis family K02584 nifA; Nif-specific regulatory protein
D RPE_4543 transcriptional regulator, NifA, Fis family K02584 nifA; Nif-specific regulatory protein
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0430 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RPE_1229 NADH ubiquinone oxidoreductase, 20 kDa subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D RPE_1230 nickel-dependent hydrogenase, large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D RPE_1248 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RPE_1247 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D RPE_1231 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RPE_1232 nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RPE_1233 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D RPE_1196 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_4280 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_4670 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_3924 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_3633 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_1310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1311 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1195 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1199 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1545 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1862 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1863 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1883 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1885 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1889 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2458 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3521 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3522 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3019 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2879 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2880 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3611 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3637 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3929 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4672 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4673 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4772 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4154 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4158 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4159 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4276 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D RPE_4671 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_4674 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_3636 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_3925 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_4283 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_1194 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_3631 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_3926 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4284 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4675 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_1193 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_3930 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_4282 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_3632 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_4676 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_0920 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_1192 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_1198 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_4281 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_4669 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_3635 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_0631 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RPE_1343 putative PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RPE_1951 multi-sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D RPE_1978 signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D RPE_3385 response regulator receiver modulated diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RPE_1872 multi-sensor signal transduction histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D RPE_3386 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D RPE_1557 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RPE_4285 conserved hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D RPE_4270 cell cycle transcriptional regulator CtrA / two component transcriptional regulator, winged helix family K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RPE_0708 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D RPE_2210 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D RPE_2211 Tripartite ATP-independent periplasmic transporter, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RPE_2212 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RPE_3805 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RPE_1727 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D RPE_1726 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D RPE_1724 transcriptional regulator, Crp/Fnr family K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
D RPE_0969 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D RPE_4629 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3370 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3371 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_2835 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3655 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_0229 periplasmic sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RPE_0230 response regulator receiver protein K15012 regA; two-component system, response regulator RegA
D RPE_2831 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_2713 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_1293 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_0628 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_0626 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_0326 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_2420 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_4547 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_2714 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_0629 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_1292 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_0325 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_0627 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_2832 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_4548 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_1334 photosynthetic reaction center, M subunit K08929 pufM; photosynthetic reaction center M subunit
D RPE_1333 photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RPE_1332 antenna complex, alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RPE_1331 antenna complex, alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D RPE_1353 photosynthetic reaction centre, H-chain K13991 puhA; photosynthetic reaction center H subunit
D RPE_3977 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPE_1207 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPE_0948 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPE_0949 cytochrome c1 K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D RPE_1341 cytochrome c, class I K08738 CYC; cytochrome c
D RPE_3768 cytochrome c, class I K08738 CYC; cytochrome c
D RPE_3971 Cache, type 2 domain protein K08738 CYC; cytochrome c
D RPE_1803 cache, type 2 K08738 CYC; cytochrome c
D RPE_0018 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RPE_0017 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RPE_0016 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RPE_0015 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RPE_0539 cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RPE_0538 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RPE_2748 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RPE_3496 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RPE_1091 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RPE_2844 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RPE_4917 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RPE_2845 lipopolysaccharide biosynthesis K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RPE_2656 putative FecR K07165 fecR; transmembrane sensor
D RPE_2720 putative FecR K07165 fecR; transmembrane sensor
D RPE_4555 putative FecR K07165 fecR; transmembrane sensor
D RPE_3239 putative FecR K07165 fecR; transmembrane sensor
D RPE_2638 putative FecR K07165 fecR; transmembrane sensor
D RPE_2651 putative FecR K07165 fecR; transmembrane sensor
D RPE_3476 putative FecR K07165 fecR; transmembrane sensor
D RPE_2647 putative FecR K07165 fecR; transmembrane sensor
D RPE_3468 putative FecR K07165 fecR; transmembrane sensor
D RPE_2289 periplasmic sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RPE_4853 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RPE_1203 putative CheA signal transduction histidine kinases K20976 hptB; histidine phosphotransfer protein HptB
D RPE_1200 anti-sigma-factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rpe04148]
D RPE_2678 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D RPE_3166 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RPE_4802 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RPE_3977 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPE_1207 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPE_0948 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rpe02024]
D RPE_2762 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RPE_1991 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RPE_4628 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RPE_1227 Antibiotic biosynthesis monooxygenase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D RPE_2323 autoinducer synthesis protein K18096 bjaI; acyl-homoserine lactone synthase [EC:2.3.1.228 2.3.1.229 2.3.1.-]
D RPE_2324 transcriptional regulator, LuxR family K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D RPE_4024 type II secretion system protein E K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D RPE_4023 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D RPE_4022 type IV secretory pathway, VirB3 family protein K20529 trbD; type IV secretion system protein TrbD
D RPE_4021 AAA ATPase K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D RPE_4020 putative conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D RPE_4018 TrbL/VirB6 plasmid conjugal transfer protein K07344 trbL; type IV secretion system protein TrbL
D RPE_4017 Conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF
D RPE_4016 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG
D RPE_4015 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI
D RPE_3786 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3787 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1693 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3053 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3800 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4231 putative branched-chain amino acid ABC transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4221 ABC transporter, periplasmic branched chain amino acid binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1647 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4215 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0999 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0848 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0546 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0593 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1390 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3211 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3789 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0264 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3555 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3788 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3854 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1651 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1694 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3052 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3784 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3795 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4213 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4222 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4229 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3853 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1000 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_0594 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1387 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3209 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_0595 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3796 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3208 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1001 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1386 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1650 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1695 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_3051 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_3785 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4212 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4223 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4230 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1649 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1696 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3055 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4224 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3782 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4226 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3851 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1002 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1389 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4211 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1003 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1388 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1648 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1697 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_0596 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3207 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3054 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3783 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3797 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3850 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4210 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4225 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4232 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1783 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_3779 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4911 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_2253 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4227 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_1707 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4629 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3370 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3371 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_2835 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3655 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_0187 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RPE_2810 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RPE_1680 efflux transporter, RND family, MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D RPE_1681 acriflavin resistance protein K18307 mexI; multidrug efflux pump
D RPE_2793 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RPE_0644 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPE_4642 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RPE_3609 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RPE_2594 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D RPE_3566 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RPE_2908 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D RPE_0146 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPE_4582 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPE_0318 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RPE_0376 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D RPE_0327 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rpe02030]
D RPE_1310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1311 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1195 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1199 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1545 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1862 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1863 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1883 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1885 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1889 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2458 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3521 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3522 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3019 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2879 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2880 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3611 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3637 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3929 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4672 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4673 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4772 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4154 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4158 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4159 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4276 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D RPE_3631 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_3926 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4284 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4675 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_1193 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4671 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_4674 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_3636 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_3925 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_4283 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_1194 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_3930 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_4282 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_3632 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_4676 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_0920 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_1192 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_3628 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D RPE_3638 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D RPE_0865 conserved hypothetical protein K03414 cheZ; chemotaxis protein CheZ
D RPE_1191 hypothetical protein K03409 cheX; chemotaxis protein CheX
D RPE_1198 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_4281 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_4669 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_3635 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_1197 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RPE_1196 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_4280 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_4670 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_3924 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_3633 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_0966 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RPE_1153 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RPE_1540 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RPE_1150 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RPE_0968 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RPE_1152 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RPE_3435 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D RPE_1149 chemotaxis protein K02556 motA; chemotaxis protein MotA
D RPE_2010 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D RPE_2583 OmpA/MotB K02557 motB; chemotaxis protein MotB
D RPE_1168 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_2011 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_4372 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_0661 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rpe02040]
D RPE_1553 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RPE_1157 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RPE_0965 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RPE_1166 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RPE_0966 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RPE_1153 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RPE_0967 putative flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RPE_1146 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RPE_4269 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RPE_4268 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RPE_1040 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RPE_1539 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RPE_1163 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RPE_1540 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RPE_1150 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RPE_0968 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RPE_1152 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RPE_3435 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D RPE_1550 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RPE_1549 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RPE_1164 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RPE_1554 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RPE_1178 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RPE_1555 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RPE_1180 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D RPE_4264 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RPE_1179 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RPE_1556 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RPE_1154 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RPE_1159 flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RPE_1536 flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RPE_1551 flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D RPE_1155 flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D RPE_1552 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RPE_1156 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RPE_1041 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RPE_1177 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RPE_0778 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RPE_1172 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D RPE_0777 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D RPE_1503 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D RPE_1538 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D RPE_1147 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D RPE_1537 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RPE_1158 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RPE_1162 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D RPE_1535 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D RPE_1531 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D RPE_1160 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D RPE_1530 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RPE_1182 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RPE_1173 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RPE_0774 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RPE_1504 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RPE_1174 flagellar hook-associated 3 family protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D RPE_0773 putative flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RPE_1505 conserved hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D RPE_1165 flagellin domain protein K02406 fliC; flagellin
D RPE_0782 flagellin domain protein K02406 fliC; flagellin
D RPE_4499 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_1523 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_1525 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_0781 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D RPE_0780 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RPE_1149 chemotaxis protein K02556 motA; chemotaxis protein MotA
D RPE_2010 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D RPE_2583 OmpA/MotB K02557 motB; chemotaxis protein MotB
D RPE_1168 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_2011 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_4372 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_0661 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_1169 putative chemotaxis protein precursor K10564 motC; chemotaxis protein MotC
D RPE_1170 flagellar hook-length control protein K10565 motD; chemotaxis protein MotD
D RPE_1055 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RPE_0430 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RPE_0969 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RPE_2607 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rpe04980]
D RPE_4850 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RPE_1846 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D RPE_1852 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPE_1854 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPE_3773 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rpe01501]
D RPE_0697 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RPE_2693 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RPE_1865 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RPE_1225 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3326 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3327 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D RPE_1226 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D RPE_3323 periplasmic sensor signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RPE_3324 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RPE_2748 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RPE_1880 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_2977 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_0224 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_2101 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RPE_3542 Beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:rpe01502]
D RPE_3372 vanX D-Ala-D-Ala dipeptidase. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RPE_2113 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPE_3334 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RPE_2103 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RPE_2104 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RPE_2107 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rpe01503]
D RPE_2978 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RPE_1939 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RPE_2181 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RPE_1225 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3326 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3327 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D RPE_1226 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D RPE_2748 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RPE_2564 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rpe01000]
C 01001 Protein kinases [BR:rpe01001]
D RPE_4476 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RPE_3911 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RPE_2845 lipopolysaccharide biosynthesis K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RPE_3498 lipopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RPE_0807 lipopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RPE_1088 exopolysaccharide biosynthesis/transport protein, putative K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RPE_4892 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RPE_1426 periplasmic sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RPE_4627 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RPE_0822 periplasmic sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RPE_3323 periplasmic sensor signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RPE_3141 putative signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RPE_2819 signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RPE_2757 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RPE_2759 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RPE_1248 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RPE_2246 periplasmic sensor hybrid histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RPE_3631 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_3926 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4284 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4675 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_1193 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_0631 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RPE_1343 putative PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RPE_1951 multi-sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D RPE_1978 signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D RPE_1872 multi-sensor signal transduction histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D RPE_1557 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RPE_1727 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D RPE_0229 periplasmic sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RPE_2289 periplasmic sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RPE_4853 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rpe01009]
D RPE_4203 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RPE_4897 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RPE_2185 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rpe01002]
D RPE_1415 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RPE_3749 peptidase A24A, prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RPE_1234 HyaD peptidase. Aspartic peptidase. MEROPS family A31 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D RPE_1845 peptidase C15, pyroglutamyl peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RPE_3262 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPE_0053 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPE_3340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RPE_0683 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RPE_2786 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RPE_0582 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RPE_4105 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D RPE_2413 Abortive infection protein K07052 K07052; CAAX protease family protein
D RPE_4804 peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RPE_4102 oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RPE_3372 vanX D-Ala-D-Ala dipeptidase. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RPE_1417 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RPE_1418 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RPE_3291 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RPE_3758 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RPE_0653 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RPE_0045 peptidase M20 K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D RPE_2516 peptidase T. Metallo peptidase. MEROPS family M20B K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RPE_0094 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RPE_2123 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RPE_4699 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RPE_2172 AAA ATPase, central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RPE_2485 AAA ATPase, central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RPE_4440 HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RPE_0896 HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RPE_2560 RseP peptidase. Metallo peptidase. MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RPE_0091 murein endopeptidase. Metallo peptidase. MEROPS family M74 K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D RPE_1939 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RPE_2181 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RPE_4642 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RPE_1599 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RPE_1366 oligopeptidase B. Serine peptidase. MEROPS family S09A K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D RPE_2864 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RPE_2510 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RPE_2512 Lon-A peptidase. Serine peptidase. MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RPE_1125 ATPase associated with various cellular activities, AAA_5 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RPE_2571 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RPE_3023 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RPE_3706 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RPE_2817 alpha/beta hydrolase fold K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-]
D RPE_2863 alpha/beta hydrolase fold K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D RPE_0271 C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RPE_0450 signal peptide peptidase A. Serine peptidase. MEROPS family S49 K04773 sppA; protease IV [EC:3.4.21.-]
D RPE_1898 prohead peptidase. Unknown type peptidase. MEROPS family U35 K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D RPE_0371 HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RPE_1368 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RPE_0024 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RPE_4739 peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D RPE_4740 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D RPE_0877 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 K03592 pmbA; PmbA protein
D RPE_4747 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 K03568 tldD; TldD protein
D RPE_2722 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
D RPE_2179 HflC protein K04087 hflC; modulator of FtsH protease HflC
D RPE_2178 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rpe01003]
D RPE_1674 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RPE_2672 Tetratricopeptide TPR_2 repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D RPE_0800 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D RPE_3509 glycosyl transferase, group 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D RPE_0175 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RPE_2723 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RPE_1880 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_2977 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_0224 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_3494 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RPE_1096 anti-sigma-factor antagonist K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RPE_0901 glycosyl transferase, family 2 K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D RPE_3652 glycosyltransferase 36 K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D RPE_2215 glycosyl transferase, family 28 K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D RPE_1278 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RPE_4553 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rpe01005]
D RPE_2564 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RPE_2566 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RPE_2117 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RPE_2562 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RPE_2588 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RPE_0035 phosphoesterase, PA-phosphatase related K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D RPE_2565 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RPE_0881 lipid-A-disaccharide synthase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RPE_2018 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RPE_0880 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RPE_2601 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RPE_3769 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RPE_4240 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RPE_0696 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RPE_1449 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RPE_1451 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RPE_4329 glycosyl transferase, group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D RPE_1506 sugar isomerase family protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RPE_1450 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RPE_1507 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RPE_1453 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RPE_1452 ADP-glyceromanno-heptose 6-epimerase precursor K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RPE_0870 glycosyl transferase, family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rpe01011]
D RPE_4488 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RPE_2110 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RPE_2108 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RPE_2105 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RPE_2102 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RPE_2113 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPE_3334 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RPE_1635 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RPE_2104 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RPE_2107 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RPE_0504 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RPE_1457 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RPE_0217 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RPE_1880 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_2977 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_0224 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RPE_2723 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RPE_2101 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RPE_2864 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RPE_0175 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RPE_4105 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D RPE_3372 vanX D-Ala-D-Ala dipeptidase. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RPE_0091 murein endopeptidase. Metallo peptidase. MEROPS family M74 K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D RPE_2633 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RPE_0374 MltA domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RPE_2932 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RPE_0701 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RPE_3303 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RPE_2862 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RPE_0285 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RPE_2978 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rpe01004]
D RPE_3307 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RPE_2826 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RPE_0256 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RPE_3304 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2021 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2020 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPE_2271 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_0118 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_3306 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_3918 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPE_0257 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D RPE_2022 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RPE_2563 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RPE_4591 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_0255 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_3164 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RPE_0303 lipolytic enzyme, G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RPE_0406 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RPE_1624 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D RPE_2388 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_4586 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_0069 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPE_4455 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RPE_2375 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RPE_1783 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_3779 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4911 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_2253 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4227 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_1707 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_0847 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RPE_2825 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RPE_3375 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RPE_4829 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rpe01006]
D RPE_0176 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RPE_1324 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RPE_4416 Farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RPE_2557 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RPE_1316 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RPE_2904 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RPE_2186 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RPE_0875 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RPE_4753 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RPE_1336 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rpe01007]
D RPE_0736 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RPE_2568 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPE_2569 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RPE_4854 glutamyl-tRNA synthetase, class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RPE_2972 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RPE_0216 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RPE_1998 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RPE_2691 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RPE_2867 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RPE_1414 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RPE_2750 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RPE_0390 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RPE_3276 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RPE_0914 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RPE_4411 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RPE_4409 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RPE_2700 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RPE_2544 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RPE_2337 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RPE_1598 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RPE_0496 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RPE_0493 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RPE_4176 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RPE_2938 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D RPE_2014 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RPE_4342 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPE_4787 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RPE_1359 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RPE_3400 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RPE_0915 aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RPE_1819 aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RPE_4884 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RPE_3402 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RPE_2761 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RPE_1423 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPE_0897 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RPE_4161 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rpe00194]
D RPE_0279 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RPE_0280 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RPE_0281 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RPE_0282 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RPE_0283 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RPE_4776 H+-transporting two-sector ATPase, B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RPE_4777 H+-transporting two-sector ATPase, B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RPE_4778 H+-transporting two-sector ATPase, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RPE_4779 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RPE_4780 FoF1 ATP synthase, subunit I K02116 atpI; ATP synthase protein I
D RPE_1333 photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RPE_1334 photosynthetic reaction center, M subunit K08929 pufM; photosynthetic reaction center M subunit
D RPE_1353 photosynthetic reaction centre, H-chain K13991 puhA; photosynthetic reaction center H subunit
D RPE_1332 antenna complex, alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RPE_1331 antenna complex, alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D RPE_2831 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_2713 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_1293 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_0628 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_0626 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_0326 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_2420 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_4547 antenna complex, alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D RPE_2714 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_0629 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_1292 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_0325 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_0627 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_2832 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D RPE_4548 antenna complex, alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rpe03000]
D RPE_3254 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPE_0486 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RPE_3833 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RPE_3979 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RPE_0252 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RPE_0744 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D RPE_1360 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RPE_1377 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RPE_3111 transcriptional regulator, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D RPE_3887 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RPE_0995 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D RPE_2381 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RPE_1223 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D RPE_1254 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RPE_0008 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RPE_2324 transcriptional regulator, LuxR family K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D RPE_0188 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D RPE_2276 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RPE_2320 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RPE_1486 cobalamin B12-binding domain protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RPE_0208 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RPE_0187 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RPE_4290 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D RPE_0258 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D RPE_3143 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D RPE_4120 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RPE_4629 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3370 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3371 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_2835 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_3655 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RPE_1741 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RPE_4360 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RPE_0588 transcriptional regulator, Crp/Fnr family K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB
D RPE_1724 transcriptional regulator, Crp/Fnr family K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
D RPE_4068 transcriptional regulator, Crp/Fnr family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D RPE_0599 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RPE_3663 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RPE_3660 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RPE_0475 transcriptional regulator, XRE family with shikimate kinase activity K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D RPE_3174 transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D RPE_1394 transcriptional regulator, XRE family K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D RPE_2537 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RPE_4143 transcriptional regulator, XRE family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RPE_4473 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RPE_3885 transcriptional regulator, NifA subfamily, Fis family K02584 nifA; Nif-specific regulatory protein
D RPE_4543 transcriptional regulator, NifA, Fis family K02584 nifA; Nif-specific regulatory protein
D RPE_4365 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D RPE_0765 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D RPE_3490 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D RPE_3421 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D RPE_4746 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator
D RPE_1972 transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D RPE_4317 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RPE_3094 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D RPE_3940 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RPE_0138 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RPE_4043 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RPE_0387 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RPE_0124 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RPE_0352 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RPE_0987 phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RPE_1212 PaaX domain protein, C-terminal domain K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RPE_3260 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D RPE_1027 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D RPE_0714 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D RPE_1533 transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RPE_2809 Ribonucleotide reductase regulator NrdR-like protein K07738 nrdR; transcriptional repressor NrdR
D RPE_2621 Sel1 domain protein repeat-containing protein K25885 exoR; exopolysaccharide production negative regulator
C 03021 Transcription machinery [BR:rpe03021]
D RPE_3562 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RPE_3597 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RPE_3596 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RPE_3027 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RPE_1055 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RPE_2168 sigma-70 region 2 domain protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_2495 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_0783 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_0540 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_1749 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_1840 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_4267 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_4735 putative RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_0795 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPE_0818 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RPE_0430 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RPE_2164 helicase domain protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D RPE_0198 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D RPE_2813 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D RPE_3608 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D RPE_3913 serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RPE_1202 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RPE_3911 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RPE_1533 transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RPE_3961 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RPE_0382 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rpe03019]
D RPE_2979 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RPE_3022 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RPE_2538 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RPE_3380 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RPE_3742 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RPE_0835 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RPE_4912 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RPE_2607 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPE_0192 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RPE_0382 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RPE_0349 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RPE_2283 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_0861 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_2762 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RPE_3281 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RPE_3041 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RPE_0944 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RPE_0273 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RPE_0276 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RPE_4818 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rpe03011]
D RPE_0449 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D RPE_2553 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D RPE_3580 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D RPE_1631 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D RPE_3569 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D RPE_3309 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D RPE_3590 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D RPE_3572 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D RPE_2858 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D RPE_3587 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D RPE_3563 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D RPE_3591 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D RPE_3564 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D RPE_3573 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D RPE_0193 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D RPE_0328 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D RPE_3577 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D RPE_3310 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D RPE_3582 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D RPE_4920 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D RPE_4091 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D RPE_3606 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D RPE_3583 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D RPE_3586 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D RPE_3585 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D RPE_3574 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D RPE_3571 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D RPE_3315 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D RPE_3599 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D RPE_3607 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D RPE_3598 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D RPE_2857 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D RPE_3576 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D RPE_3567 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D RPE_3579 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D RPE_3561 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D RPE_3570 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D RPE_0331 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D RPE_0497 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D RPE_0556 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D RPE_3581 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D RPE_3584 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D RPE_3575 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D RPE_0555 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D RPE_0129 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D RPE_3578 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D RPE_3568 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D RPE_0665 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D RPE_0174 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D RPE_3383 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D RPE_0642 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D RPE_0498 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D RPE_4115 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D RPE_1437 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D RPE_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPE_R0059 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPE_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPE_R0063 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPE_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPE_R0060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rpe03009]
D RPE_3022 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RPE_3021 GTP-binding protein Era K03595 era; GTPase
D RPE_0550 small GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D RPE_1533 transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D RPE_0198 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D RPE_2813 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D RPE_3608 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D RPE_3297 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RPE_3263 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RPE_0028 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RPE_0929 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RPE_0873 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RPE_0385 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RPE_2099 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RPE_0357 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RPE_1064 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RPE_3682 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RPE_3272 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RPE_0269 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RPE_0921 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RPE_0038 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RPE_1062 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RPE_0319 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RPE_0930 Pseudouridine synthase, Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RPE_3547 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RPE_0817 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RPE_0209 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RPE_4761 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RPE_0329 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RPE_3040 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RPE_2125 LSU ribosomal protein L11P methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RPE_0928 modification methylase, HemK family K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RPE_2979 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RPE_3368 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RPE_0835 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RPE_4500 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RPE_3345 small GTP-binding protein K03977 engA; GTPase
D RPE_2763 GTP-binding protein, HSR1-related protein K03665 hflX; GTPase
D RPE_4380 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RPE_3026 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RPE_3733 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RPE_0195 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RPE_0199 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D RPE_0268 iojap-like protein K09710 ybeB; ribosome-associated protein
D RPE_0204 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D RPE_0431 sigma 54 modulation protein / SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor
D RPE_1439 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rpe03016]
D RPE_1409 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D RPE_2568 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPE_2544 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RPE_1414 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RPE_0390 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RPE_2867 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RPE_2569 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RPE_2691 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RPE_3276 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RPE_1598 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RPE_2337 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RPE_2700 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RPE_1998 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RPE_2750 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RPE_0914 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RPE_0496 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RPE_0493 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RPE_2972 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RPE_0216 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RPE_3394 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPE_3855 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPE_0200 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RPE_0654 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RPE_0194 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RPE_2969 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_4521 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_4380 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RPE_2186 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RPE_0383 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RPE_0384 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RPE_4286 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RPE_0643 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RPE_R0024 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D RPE_0353 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RPE_3278 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RPE_0426 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RPE_0302 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RPE_0736 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RPE_4411 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RPE_4409 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RPE_4854 glutamyl-tRNA synthetase, class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RPE_4152 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RPE_0931 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RPE_1976 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RPE_2756 putative TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RPE_0206 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RPE_0320 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RPE_1603 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RPE_2903 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RPE_0330 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RPE_0947 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RPE_0319 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RPE_1039 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RPE_3727 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RPE_4523 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D RPE_2962 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D RPE_4390 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D RPE_2770 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RPE_2884 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RPE_3943 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RPE_0946 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RPE_2606 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RPE_0502 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RPE_3170 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D RPE_2771 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RPE_4700 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RPE_0210 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RPE_0065 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RPE_3380 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RPE_0192 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RPE_1994 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:rpe03012]
D RPE_0196 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D RPE_0500 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D RPE_3288 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RPE_2554 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D RPE_3588 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RPE_3612 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RPE_3589 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D RPE_4173 small GTP-binding protein K02355 fusA; elongation factor G
D RPE_0160 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D RPE_2556 ribosome recycling factor K02838 frr; ribosome recycling factor
D RPE_0161 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RPE_0637 methyltransferase small K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RPE_1438 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RPE_3743 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D RPE_2930 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D RPE_2929 tRNA synthetase, class II (D, K and N) K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D RPE_2976 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D RPE_3045 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
D RPE_1419 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rpe03110]
D RPE_3404 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RPE_4337 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RPE_2641 ATPase AAA-2 domain protein K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D RPE_2511 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RPE_0372 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RPE_4897 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RPE_0349 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RPE_0414 molecular chaperone, HSP70 class K04046 yegD; hypothetical chaperone protein
D RPE_2283 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_0861 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_0348 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RPE_4882 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D RPE_0351 GrpE protein K03687 GRPE; molecular chaperone GrpE
D RPE_2586 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D RPE_0685 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D RPE_0126 RNA-binding S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D RPE_0862 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RPE_2284 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RPE_1939 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RPE_2181 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RPE_4699 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RPE_2172 AAA ATPase, central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RPE_2485 AAA ATPase, central domain protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RPE_4779 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RPE_0376 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D RPE_2948 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D RPE_2543 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D RPE_1241 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RPE_1242 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RPE_4642 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RPE_2592 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RPE_0147 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RPE_3295 conserved hypothetical protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RPE_0459 thioredoxin K03671 TXN; thioredoxin
D RPE_0410 Thioredoxin domain K05838 ybbN; putative thioredoxin
D RPE_0153 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D RPE_1620 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D RPE_0315 periplasmic protein thiol--disulphide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rpe04131]
D RPE_3287 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RPE_4722 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPE_4728 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RPE_0342 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPE_3057 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPE_4110 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPE_4897 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RPE_0025 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rpe04121]
C 03051 Proteasome [BR:rpe03051]
D RPE_4897 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rpe03032]
D RPE_4128 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RPE_3254 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPE_2517 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_3846 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_4045 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_1967 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_2827 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D RPE_0451 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D RPE_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RPE_3317 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RPE_1056 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RPE_2888 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RPE_2550 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPE_3290 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RPE_0388 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPE_2866 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPE_0377 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPE_4813 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPE_4424 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RPE_4821 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPE_2121 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RPE_2764 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RPE_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RPE_3017 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RPE_2946 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RPE_3379 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rpe03036]
D RPE_2672 Tetratricopeptide TPR_2 repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D RPE_2469 AAA ATPase, central domain protein K22399 TRIP13; pachytene checkpoint protein 2
D RPE_3254 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPE_3022 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RPE_4722 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPE_4042 probably methylase/helicase K26273 SBNO; protein strawberry notch
D RPE_2517 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_3846 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_4045 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_1967 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_2827 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D RPE_0451 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D RPE_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RPE_2795 hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D RPE_3091 Ferritin, Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RPE_0977 Ferritin, Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RPE_2762 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RPE_1254 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RPE_4443 condensin subunit Smc K03529 smc; chromosome segregation protein
D RPE_1251 SMC domain protein K03529 smc; chromosome segregation protein
D RPE_2694 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D RPE_2695 condensin subunit ScpB K06024 scpB; segregation and condensation protein B
D RPE_2115 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RPE_4832 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RPE_2101 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RPE_0398 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RPE_2100 conserved hypothetical protein K03586 ftsL; cell division protein FtsL
D RPE_2114 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RPE_2106 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RPE_4831 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D RPE_2116 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RPE_4731 cell division protein ZapA K09888 zapA; cell division protein ZapA
D RPE_0301 AFG1-family ATPase K06916 zapE; cell division protein ZapE
D RPE_2978 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RPE_1225 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3326 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3121 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RPE_3120 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RPE_3119 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RPE_3412 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D RPE_3793 putative ParA family partition protein K03496 parA; chromosome partitioning protein
D RPE_3966 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RPE_0386 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D RPE_4043 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RPE_0387 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RPE_3017 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RPE_2946 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RPE_0384 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RPE_0385 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RPE_2903 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RPE_0287 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC
D RPE_0141 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD
D RPE_1980 MRP-like protein (ATP/GTP-binding protein) K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RPE_0699 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RPE_0645 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rpe03400]
D RPE_4328 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RPE_4869 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RPE_3442 Deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RPE_2751 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RPE_4433 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RPE_0488 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RPE_0149 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RPE_4509 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RPE_4385 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RPE_0466 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RPE_0486 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RPE_1823 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPE_3029 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPE_4422 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPE_4855 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RPE_4391 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RPE_0471 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RPE_2622 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPE_3647 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPE_0396 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPE_2934 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RPE_2121 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RPE_4821 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPE_2890 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D RPE_4191 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RPE_0924 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RPE_2137 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_2881 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_4057 superfamily I DNA and RNA helicases-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPE_3597 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RPE_3596 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RPE_3562 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RPE_3027 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RPE_2790 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RPE_0246 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RPE_1420 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RPE_2473 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RPE_4617 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RPE_1068 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RPE_2550 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPE_3290 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RPE_0388 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPE_2866 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPE_0377 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPE_4813 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPE_2888 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RPE_3253 T/G mismatch-specific endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D RPE_2475 conserved hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RPE_1594 RecA protein K03553 recA; recombination protein RecA
D RPE_4769 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RPE_4767 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RPE_4770 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RPE_0286 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RPE_3338 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RPE_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RPE_2788 DEAD/DEAH box helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RPE_3018 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RPE_4811 recombination protein RecR K06187 recR; recombination protein RecR
D RPE_2119 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RPE_0460 DNA helicase/exodeoxyribonuclease V, subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RPE_0461 DNA helicase/exodeoxyribonuclease V, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RPE_1860 protein of unknown function DUF853, NPT hydrolase putative K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RPE_2500 DEAD/DEAH box helicase domain protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D RPE_0101 Ku domain protein K10979 ku; DNA end-binding protein Ku
D RPE_3725 Ku domain protein K10979 ku; DNA end-binding protein Ku
D RPE_3724 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RPE_2764 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RPE_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RPE_3379 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RPE_2517 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_3846 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_4045 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_1967 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RPE_2827 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D RPE_0451 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D RPE_4912 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RPE_3388 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RPE_2571 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RPE_1825 conserved hypothetical protein K14160 imuA; protein ImuA
D RPE_1826 conserved hypothetical protein K14161 imuB; protein ImuB
D RPE_1827 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RPE_2448 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RPE_0730 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RPE_2501 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RPE_3177 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rpe03029]
D RPE_0196 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D RPE_0500 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D RPE_2554 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D RPE_3588 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RPE_3612 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RPE_3589 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D RPE_4173 small GTP-binding protein K02355 fusA; elongation factor G
D RPE_2823 Ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D RPE_0127 helicase domain protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D RPE_3021 GTP-binding protein Era K03595 era; GTPase
D RPE_2972 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RPE_0390 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RPE_3276 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RPE_2691 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RPE_3358 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RPE_1796 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RPE_3356 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RPE_3362 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RPE_3160 protein of unknown function DUF155 K23499 RMND1; required for meiotic nuclear division protein 1
D RPE_3535 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D RPE_2888 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RPE_2561 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D RPE_0349 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RPE_0351 GrpE protein K03687 GRPE; molecular chaperone GrpE
D RPE_2283 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_0861 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_0862 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RPE_2284 chaperonin Cpn10 K04078 groES; chaperonin GroES
D RPE_0348 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RPE_2969 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_4521 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_1620 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D RPE_1433 protein of unknown function DUF185 K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D RPE_1980 MRP-like protein (ATP/GTP-binding protein) K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RPE_4753 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RPE_4755 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RPE_2849 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D RPE_0644 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPE_4758 Surfeit locus 1 family protein K14998 SURF1; surfeit locus 1 family protein
D RPE_2947 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D RPE_0739 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D RPE_4897 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rpe02000]
D RPE_1447 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RPE_1709 ABC transporter related K24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3]
D RPE_1085 type I secretion system ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D RPE_2007 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RPE_3594 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPE_3972 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPE_0664 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPE_3511 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RPE_1008 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RPE_4689 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D RPE_0887 SbmABacA family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D RPE_2392 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein
D RPE_1760 sulfate ABC transporter, periplasmic sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RPE_1768 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RPE_1759 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RPE_1769 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RPE_1770 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RPE_1758 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RPE_1771 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RPE_0764 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RPE_0763 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D RPE_0762 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RPE_4638 ABC-type nitrate transport system periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RPE_1265 ABC-type nitrate transport system periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RPE_4637 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D RPE_1264 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D RPE_1263 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RPE_4636 ABC transporter related K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RPE_3192 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RPE_3205 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RPE_3194 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D RPE_3195 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RPE_4073 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D RPE_4074 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D RPE_2015 extracellular solute-binding protein, family 1 K11073 potF; putrescine transport system substrate-binding protein
D RPE_4081 binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein
D RPE_4082 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D RPE_4083 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RPE_2201 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D RPE_2202 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RPE_1214 NLPA lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RPE_0108 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RPE_3859 ABC-type sulfonate transport system periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RPE_3912 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RPE_3889 ABC sulfate transport system, periplasmic binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RPE_1215 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RPE_0106 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RPE_3858 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RPE_3890 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RPE_1216 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RPE_0107 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RPE_3857 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RPE_3891 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RPE_3687 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RPE_1384 extracellular solute-binding protein, family 1 K17321 glpV; glycerol transport system substrate-binding protein
D RPE_1381 binding-protein-dependent transport systems inner membrane component K17322 glpP; glycerol transport system permease protein
D RPE_1382 binding-protein-dependent transport systems inner membrane component K17323 glpQ; glycerol transport system permease protein
D RPE_1379 ABC transporter related K17324 glpS; glycerol transport system ATP-binding protein
D RPE_1380 ABC transporter related K17325 glpT; glycerol transport system ATP-binding protein
D RPE_0440 extracellular solute-binding protein, family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RPE_0544 extracellular solute-binding protein, family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RPE_0438 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RPE_0437 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RPE_0436 ABC transporter related K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RPE_1739 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RPE_1473 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RPE_1471 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RPE_1737 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RPE_1738 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RPE_1472 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RPE_3685 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D RPE_3684 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RPE_2451 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein
D RPE_4891 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RPE_4890 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D RPE_4889 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D RPE_4888 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RPE_3114 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RPE_2051 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RPE_2048 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RPE_3112 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RPE_3113 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RPE_2049 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D RPE_2050 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RPE_3115 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RPE_2729 cationic amino acid ABC transporter, periplasmic binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RPE_0535 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RPE_2730 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein
D RPE_2731 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D RPE_2732 ABC transporter related K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RPE_3786 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3787 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1693 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3053 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3800 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4231 putative branched-chain amino acid ABC transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4221 ABC transporter, periplasmic branched chain amino acid binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1647 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_4215 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0999 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0848 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0546 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0593 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1390 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3211 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3789 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_0264 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3555 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3788 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_3854 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RPE_1651 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1694 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3052 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3784 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3795 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4213 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4222 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_4229 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3853 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1000 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_0594 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_1387 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_3209 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RPE_0595 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3796 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3208 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1001 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1386 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1650 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1695 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_3051 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_3785 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4212 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4223 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_4230 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D RPE_1649 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1696 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3055 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4224 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3782 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4226 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_3851 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1002 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1389 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_4211 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RPE_1003 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1388 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1648 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_1697 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_0596 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3207 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3054 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3783 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3797 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3850 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4210 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4225 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_4232 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RPE_3180 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D RPE_3182 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D RPE_3183 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D RPE_3184 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D RPE_4602 amide-UreA binding protein K11959 urtA; urea transport system substrate-binding protein
D RPE_3741 branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor K11959 urtA; urea transport system substrate-binding protein
D RPE_4601 inner-membrane translocator K11960 urtB; urea transport system permease protein
D RPE_3740 inner-membrane translocator K11960 urtB; urea transport system permease protein
D RPE_4600 inner-membrane translocator K11961 urtC; urea transport system permease protein
D RPE_3739 inner-membrane translocator K11961 urtC; urea transport system permease protein
D RPE_3738 ABC transporter related K11962 urtD; urea transport system ATP-binding protein
D RPE_4599 ABC transporter related K11962 urtD; urea transport system ATP-binding protein
D RPE_3737 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D RPE_4598 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D RPE_0737 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RPE_2793 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RPE_3766 extracellular solute-binding protein, family 5 K13893 yejA; microcin C transport system substrate-binding protein
D RPE_3767 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RPE_3765 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D RPE_3764 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D RPE_3761 ABC transporter related K13896 yejF; microcin C transport system ATP-binding protein
D RPE_3153 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein
D RPE_3154 transport system permease protein K25133 hmuU; heme transport system permease protein
D RPE_3155 ABC transporter related K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D RPE_3486 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RPE_0529 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RPE_3126 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RPE_3128 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D RPE_0527 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D RPE_3487 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D RPE_3488 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RPE_3127 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RPE_0528 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RPE_2840 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RPE_2838 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein
D RPE_2837 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein
D RPE_2839 ABC transporter related K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RPE_4292 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RPE_1968 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RPE_1970 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D RPE_4294 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D RPE_4291 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RPE_4295 conserved hypothetical protein K10094 cbiK; nickel transport protein
D RPE_1971 ABC-type Co2+ transport system, periplasmic component K10094 cbiK; nickel transport protein
D RPE_1969 conserved hypothetical protein K16915 cbiL; nickel transport protein
D RPE_4293 conserved hypothetical protein K16915 cbiL; nickel transport protein
D RPE_4793 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D RPE_4792 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D RPE_4791 ABC transporter related K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D RPE_4249 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D RPE_4248 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RPE_3292 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D RPE_3293 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D RPE_0429 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RPE_3098 nitrous oxide metabolic protein K19341 nosY; Cu-processing system permease protein
D RPE_3097 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein
D RPE_2545 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D RPE_3953 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D RPE_2546 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RPE_3952 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RPE_0314 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D
D RPE_0313 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D RPE_0312 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D RPE_0311 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RPE_4831 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D RPE_4832 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RPE_0227 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPE_2131 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPE_4685 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPE_4664 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPE_1668 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPE_0228 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPE_2132 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPE_4684 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPE_1667 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPE_0520 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RPE_3320 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RPE_0305 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D RPE_3321 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RPE_0521 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RPE_0304 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RPE_2966 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RPE_1280 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D RPE_1063 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D RPE_0723 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D RPE_4870 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump
D RPE_3843 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D RPE_2200 major facilitator superfamily MFS_1 K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D RPE_1469 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D RPE_1294 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RPE_1337 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RPE_1352 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RPE_0697 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RPE_3344 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RPE_2122 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RPE_4737 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RPE_2339 major facilitator superfamily MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RPE_2093 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RPE_0190 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RPE_4167 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RPE_0025 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D RPE_0159 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RPE_0825 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D RPE_0824 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RPE_0432 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RPE_1742 cyclic nucleotide-binding protein K10716 kch; voltage-gated potassium channel
D RPE_2897 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D RPE_0402 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RPE_0404 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RPE_0022 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_1562 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_0518 membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_4164 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_4177 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_0254 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_0503 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_0675 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_4327 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_3417 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RPE_3031 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D RPE_1400 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein
D RPE_3422 magnesium transporter K06213 mgtE; magnesium transporter
D RPE_1149 chemotaxis protein K02556 motA; chemotaxis protein MotA
D RPE_2010 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D RPE_2583 OmpA/MotB K02557 motB; chemotaxis protein MotB
D RPE_1168 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_2011 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_4372 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_0661 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_3146 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D RPE_4579 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D RPE_3466 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D RPE_0960 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D RPE_0961 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D RPE_3145 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D RPE_3465 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D RPE_4580 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D RPE_4710 MotA/TolQ/ExbB proton channel K03562 tolQ; biopolymer transport protein TolQ
D RPE_4709 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D RPE_4349 Mg2+ transporter protein, CorA family protein K03284 corA; magnesium transporter
D RPE_4508 Mg2+ transporter protein, CorA family protein K16074 zntB; zinc transporter
D RPE_2852 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D RPE_2851 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D RPE_3279 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein
D RPE_2999 protein of unknown function DUF1211 K24915 TMEM175; TMEM175 potassium channel family protein
D RPE_2886 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPE_0145 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPE_4789 OmpA domain protein transmembrane region-containing protein K16079 omp31; outer membrane immunogenic protein
D RPE_0728 porin K16079 omp31; outer membrane immunogenic protein
D RPE_0923 putative outer-membrane immunogenic protein precursor K16079 omp31; outer membrane immunogenic protein
D RPE_2889 putative outer membrane protein K16079 omp31; outer membrane immunogenic protein
D RPE_2362 OmpA domain protein transmembrane region-containing protein K16079 omp31; outer membrane immunogenic protein
D RPE_2998 putative outer-membrane immunogenic protein precursor K16079 omp31; outer membrane immunogenic protein
D RPE_0834 porin K16079 omp31; outer membrane immunogenic protein
D RPE_2895 putative outer-membrane protein precursor K16079 omp31; outer membrane immunogenic protein
D RPE_4165 conserved hypothetical protein K16079 omp31; outer membrane immunogenic protein
D RPE_4895 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RPE_2394 outer membrane autotransporter barrel domain K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D RPE_0958 outer membrane autotransporter barrel domain K12686 apeE; outer membrane lipase/esterase
D RPE_3830 outer membrane autotransporter barrel domain K12686 apeE; outer membrane lipase/esterase
D RPE_4578 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D RPE_3149 TonB-dependent heme/hemoglobin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D RPE_2957 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RPE_3856 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RPE_2818 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RPE_3483 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RPE_2095 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RPE_0526 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RPE_1404 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RPE_2748 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RPE_3496 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RPE_1091 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RPE_2844 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RPE_4917 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RPE_3669 Carbohydrate-selective porin OprB K07267 oprB; porin
D RPE_2561 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D RPE_2118 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D RPE_0428 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D RPE_0427 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D RPE_3294 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D RPE_0389 conserved hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D RPE_0203 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein
D RPE_0509 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RPE_4658 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D RPE_1681 acriflavin resistance protein K18307 mexI; multidrug efflux pump
D RPE_3479 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D RPE_1374 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D RPE_3327 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D RPE_1226 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D RPE_2741 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D RPE_2742 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D RPE_3046 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RPE_4507 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RPE_3085 C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein
D RPE_4095 sodium/calcium exchanger membrane region K07300 chaA; Ca2+:H+ antiporter
D RPE_0181 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D RPE_0093 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D RPE_1600 sodium/hydrogen exchanger K03455 KEA1_2_3; K+:H+ antiporter
D RPE_1601 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D RPE_0237 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D RPE_3015 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D RPE_2210 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D RPE_2211 Tripartite ATP-independent periplasmic transporter, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RPE_2212 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RPE_3805 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RPE_2876 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D RPE_3657 Bile acid:sodium symporter K03325 ACR3; arsenite transporter
D RPE_3873 NADH dehydrogenase (quinone) K05559 phaA; multicomponent K+:H+ antiporter subunit A
D RPE_3872 NADH-ubiquinone oxidoreductase, chain 4L K05560 phaC; multicomponent K+:H+ antiporter subunit C
D RPE_3871 NADH dehydrogenase (quinone) K05561 phaD; multicomponent K+:H+ antiporter subunit D
D RPE_3870 cation antiporter K05562 phaE; multicomponent K+:H+ antiporter subunit E
D RPE_3869 multiple resistance and pH regulation protein F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D RPE_3868 monovalent cation/proton antiporter, MnhG/PhaG subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G
D RPE_1457 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RPE_0217 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RPE_2796 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D RPE_3369 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D RPE_1960 K+ potassium transporter K03549 kup; KUP system potassium uptake protein
D RPE_2012 K+ potassium transporter K03549 kup; KUP system potassium uptake protein
D RPE_4274 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein
D RPE_4697 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D RPE_4696 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D RPE_1955 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D RPE_2147 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D RPE_2146 protein of unknown function DUF1468 K07794 tctB; putative tricarboxylic transport membrane protein
D RPE_1956 conserved hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D RPE_1957 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein
D RPE_2148 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein
D RPE_3897 protein of unknown function DUF125, transmembrane K22736 VIT; vacuolar iron transporter family protein
D RPE_4156 Rubrerythrin K22737 mbfA; erythrin-vacuolar iron transport family protein
D RPE_2106 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RPE_0223 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D RPE_3671 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D RPE_3673 conserved hypothetical membrane antigen K07230 p19; periplasmic iron binding protein
D RPE_2949 conserved hypothetical membrane antigen K07230 p19; periplasmic iron binding protein
D RPE_4806 high-affinity nickel-transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D RPE_3144 TonB family protein K03832 tonB; periplasmic protein TonB
D RPE_4581 TonB family protein K03832 tonB; periplasmic protein TonB
D RPE_0962 TonB family protein K03832 tonB; periplasmic protein TonB
D RPE_3463 conserved hypothetical protein K03832 tonB; periplasmic protein TonB
D RPE_3471 TonB family protein K03832 tonB; periplasmic protein TonB
D RPE_4702 OmpA/MotB domain protein K03640 pal; peptidoglycan-associated lipoprotein
D RPE_4707 transport system periplasmic component K03641 tolB; TolB protein
D RPE_2815 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RPE_1645 cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D RPE_3080 cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D RPE_4144 NapC/NirT cytochrome c domain protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D RPE_2092 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D RPE_0189 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D RPE_1010 type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RPE_3512 type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RPE_4659 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D RPE_1086 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D
D RPE_1680 efflux transporter, RND family, MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D RPE_1225 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3326 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_2740 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D RPE_3498 lipopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RPE_0807 lipopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RPE_1088 exopolysaccharide biosynthesis/transport protein, putative K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RPE_1089 lipopolysaccharide biosynthesis K25590 epsF; protein tyrosine kinase modulator
D RPE_2845 lipopolysaccharide biosynthesis K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RPE_3680 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RPE_3679 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RPE_1339 TspO and MBR like proteins K05770 TSPO; translocator protein
D RPE_1934 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D RPE_2025 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D RPE_2407 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D RPE_1974 Putative copper export protein-like protein K07245 pcoD; copper resistance protein D
C 02044 Secretion system [BR:rpe02044]
D RPE_1085 type I secretion system ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D RPE_1086 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D
D RPE_2748 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D RPE_3511 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RPE_1008 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RPE_1010 type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RPE_3512 type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RPE_2669 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D RPE_2663 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RPE_2662 type II secretion system protein K02455 gspF; general secretion pathway protein F
D RPE_2661 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D RPE_2660 putative general secretion pathway protein H precursor K02457 gspH; general secretion pathway protein H
D RPE_2667 hypothetical protein K02460 gspK; general secretion pathway protein K
D RPE_2666 Fimbrial assembly family protein K02461 gspL; general secretion pathway protein L
D RPE_2665 hypothetical protein K02462 gspM; general secretion pathway protein M
D RPE_2664 hypothetical protein K02463 gspN; general secretion pathway protein N
D RPE_3749 peptidase A24A, prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RPE_4298 putative pilus assembly protein cpaB K02279 cpaB; pilus assembly protein CpaB
D RPE_3751 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D RPE_3752 pilus biogenesis lipoprotein CpaD K02281 cpaD; pilus assembly protein CpaD
D RPE_3753 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D RPE_3754 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RPE_3755 type II secretion system protein K12510 tadB; tight adherence protein B
D RPE_3756 type II secretion system protein K12511 tadC; tight adherence protein C
D RPE_1882 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D RPE_3748 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D RPE_0049 protein of unknown function YGGT K02221 yggT; YggT family protein
D RPE_0316 conserved hypothetical protein K02237 comEA; competence protein ComEA
D RPE_2570 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D RPE_4264 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RPE_1179 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RPE_1556 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RPE_1154 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RPE_3543 type III secretion protein K04061 flhB2; flagellar biosynthesis protein
D RPE_0965 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RPE_1166 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RPE_0967 putative flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RPE_1146 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RPE_4269 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RPE_0968 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RPE_1152 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RPE_3435 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D RPE_1550 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RPE_1549 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RPE_1164 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RPE_1554 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RPE_1178 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RPE_1555 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RPE_1180 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D RPE_4026 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RPE_4024 type II secretion system protein E K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D RPE_4023 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D RPE_4022 type IV secretory pathway, VirB3 family protein K20529 trbD; type IV secretion system protein TrbD
D RPE_4021 AAA ATPase K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D RPE_4017 Conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF
D RPE_4016 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG
D RPE_4015 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI
D RPE_4020 putative conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D RPE_4018 TrbL/VirB6 plasmid conjugal transfer protein K07344 trbL; type IV secretion system protein TrbL
D RPE_2394 outer membrane autotransporter barrel domain K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D RPE_0958 outer membrane autotransporter barrel domain K12686 apeE; outer membrane lipase/esterase
D RPE_3830 outer membrane autotransporter barrel domain K12686 apeE; outer membrane lipase/esterase
D RPE_0146 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPE_4582 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPE_0376 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D RPE_2907 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RPE_3609 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RPE_2906 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D RPE_2594 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D RPE_3566 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RPE_0327 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RPE_0318 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RPE_2908 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D RPE_0644 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPE_2696 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RPE_2697 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D RPE_2698 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rpe02042]
D RPE_2886 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPE_0145 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPE_4634 Hly-III family protein K11068 hlyIII; hemolysin III
D RPE_4312 Hly-III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rpe02022]
D RPE_4892 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RPE_4886 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RPE_1426 periplasmic sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RPE_1425 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RPE_4627 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RPE_4628 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RPE_0822 periplasmic sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RPE_0821 two component transcriptional regulator, winged helix family K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RPE_3323 periplasmic sensor signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RPE_3324 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RPE_1185 two component transcriptional regulator, winged helix family K21603 ftcR; two-component system, OmpR family, flagellar system response regulator FtcR
D RPE_1928 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_1940 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_4561 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_4656 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_3989 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_3993 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_0541 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_4899 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_1964 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RPE_3514 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RPE_3141 putative signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RPE_2819 signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RPE_3142 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RPE_2757 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RPE_2758 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RPE_2759 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RPE_2760 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RPE_1248 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RPE_1247 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D RPE_2246 periplasmic sensor hybrid histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RPE_3631 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_3926 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4284 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4675 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_1193 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_3930 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_4282 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_3632 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_4676 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_0920 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_1192 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_1198 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_4281 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_4669 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_3635 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_0631 multi-sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RPE_1343 putative PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RPE_1951 multi-sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D RPE_1978 signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D RPE_1872 multi-sensor signal transduction histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D RPE_3385 response regulator receiver modulated diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RPE_3386 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D RPE_1557 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RPE_4270 cell cycle transcriptional regulator CtrA / two component transcriptional regulator, winged helix family K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RPE_0708 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D RPE_1727 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D RPE_1726 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D RPE_0969 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D RPE_0229 periplasmic sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RPE_0230 response regulator receiver protein K15012 regA; two-component system, response regulator RegA
D RPE_2289 periplasmic sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RPE_4853 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RPE_1203 putative CheA signal transduction histidine kinases K20976 hptB; histidine phosphotransfer protein HptB
D RPE_1266 putative nitrate transporter component, NrtA K22067 nasS; two-component system, oxyanion-binding sensor
D RPE_1267 response regulator receiver and ANTAR domain protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:rpe02035]
D RPE_3631 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_3926 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4284 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4675 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_1193 CheA signal transduction histidine kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RPE_4671 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_4674 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_3636 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_3925 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_4283 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_1194 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RPE_1191 hypothetical protein K03409 cheX; chemotaxis protein CheX
D RPE_3628 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D RPE_3638 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D RPE_1197 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RPE_1196 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_4280 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_4670 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_3924 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_3633 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RPE_1198 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_4281 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_4669 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_3635 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RPE_3930 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_4282 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_3632 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_4676 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_0920 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_1192 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RPE_0865 conserved hypothetical protein K03414 cheZ; chemotaxis protein CheZ
D RPE_1310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1311 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1195 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1199 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1545 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1862 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1863 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1883 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1885 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_1889 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2458 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3521 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3522 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3019 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2879 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_2880 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3611 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3637 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_3929 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4672 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4673 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4772 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4154 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4158 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4159 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RPE_4276 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D RPE_0967 putative flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RPE_1146 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RPE_4269 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RPE_4268 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RPE_1550 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RPE_1549 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RPE_1164 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RPE_1554 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RPE_1178 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RPE_1555 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RPE_1180 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D RPE_4264 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RPE_1179 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RPE_1556 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RPE_1154 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RPE_0966 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RPE_1153 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RPE_1540 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RPE_1150 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RPE_0968 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RPE_1152 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RPE_3435 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D RPE_0965 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RPE_1166 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RPE_1531 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D RPE_1160 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D RPE_1159 flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RPE_1536 flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RPE_1162 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D RPE_1535 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D RPE_1539 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RPE_1163 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RPE_1553 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RPE_1157 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RPE_1040 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RPE_1551 flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D RPE_1155 flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D RPE_1552 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RPE_1156 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RPE_1041 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RPE_1177 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RPE_0778 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RPE_1538 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D RPE_1147 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D RPE_1537 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RPE_1158 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RPE_1530 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RPE_1182 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RPE_1172 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D RPE_0777 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D RPE_1503 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D RPE_1173 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RPE_0774 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RPE_1504 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RPE_1174 flagellar hook-associated 3 family protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D RPE_0773 putative flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RPE_1505 conserved hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D RPE_1165 flagellin domain protein K02406 fliC; flagellin
D RPE_0782 flagellin domain protein K02406 fliC; flagellin
D RPE_4499 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_1523 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_1525 protein of unknown function DUF1522 K02406 fliC; flagellin
D RPE_0781 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D RPE_0780 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RPE_1149 chemotaxis protein K02556 motA; chemotaxis protein MotA
D RPE_2010 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D RPE_2583 OmpA/MotB K02557 motB; chemotaxis protein MotB
D RPE_1168 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_2011 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_4372 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_0661 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D RPE_1169 putative chemotaxis protein precursor K10564 motC; chemotaxis protein MotC
D RPE_1170 flagellar hook-length control protein K10565 motD; chemotaxis protein MotD
D RPE_0969 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D RPE_1527 flagellar FlaF family protein K06602 flaF; flagellar biosynthesis activator protein FlaF
D RPE_1175 flagellar FlaF family protein K06602 flaF; flagellar biosynthesis activator protein FlaF
D RPE_1526 flagellar FlbT family protein K06601 flbT; flagellar biosynthesis repressor protein FlbT
D RPE_1176 flagellar FlbT family protein K06601 flbT; flagellar biosynthesis repressor protein FlbT
D RPE_1882 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D RPE_3748 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D RPE_3749 peptidase A24A, prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RPE_4298 putative pilus assembly protein cpaB K02279 cpaB; pilus assembly protein CpaB
D RPE_3751 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D RPE_3752 pilus biogenesis lipoprotein CpaD K02281 cpaD; pilus assembly protein CpaD
D RPE_3753 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D RPE_3754 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rpe04812]
D RPE_2116 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RPE_2115 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RPE_3121 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RPE_3120 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RPE_3119 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RPE_3412 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D RPE_3793 putative ParA family partition protein K03496 parA; chromosome partitioning protein
D RPE_3966 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RPE_0386 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D RPE_4043 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RPE_0387 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rpe04147]
D RPE_4897 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RPE_4722 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPE_2607 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPE_4728 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RPE_4725 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RPE_3057 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPE_4110 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPE_3981 1-Cys peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RPE_2283 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_0861 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPE_0349 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RPE_2028 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RPE_3268 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RPE_3588 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RPE_3612 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RPE_3394 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPE_3855 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPE_1783 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_3779 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4911 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_2253 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_4227 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_1707 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPE_3827 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0168 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4198 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_0673 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_2372 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3778 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_3219 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_1701 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPE_4203 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RPE_3565 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RPE_4842 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RPE_0034 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RPE_4837 Pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RPE_0913 fumarylacetoacetate hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RPE_2682 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RPE_3718 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RPE_3774 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RPE_2505 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPE_3009 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RPE_0277 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RPE_2708 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RPE_0033 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RPE_4160 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RPE_0026 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RPE_0290 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_2618 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPE_4848 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RPE_4517 electron transfer flavoprotein beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RPE_3710 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RPE_2593 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RPE_0342 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rpe02048]
D RPE_4431 DNA adenine methylase CcrM K13581 ccrM; modification methylase [EC:2.1.1.72]
D RPE_3254 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPE_0562 type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D RPE_0561 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RPE_0569 restriction endonuclease-like protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D RPE_2192 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RPE_4723 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RPE_2191 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D RPE_2207 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D RPE_1392 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D RPE_1393 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D RPE_4476 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RPE_4473 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RPE_4111 protein of unknown function UPF0150 K18843 hicB; antitoxin HicB
D RPE_4765 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D RPE_1570 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D RPE_1421 putative transcriptional regulators, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D RPE_1830 putative transcriptional regulators, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D RPE_1286 putative transcriptional regulators, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D RPE_1604 putative transcriptional regulators, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
D RPE_4100 death-on-curing family protein K07341 doc; death on curing protein
D RPE_3433 prevent-host-death family protein K19165 phd; antitoxin Phd
D RPE_4434 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D RPE_2952 putative plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D RPE_4362 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D RPE_4142 conserved hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D RPE_4143 transcriptional regulator, XRE family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RPE_1994 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D RPE_1995 SpoVT/AbrB domain protein K18829 mvpT; antitoxin VapB
D RPE_0472 virulence-associated protein VapB-like protein K18829 mvpT; antitoxin VapB
D RPE_2805 conserved hypothetical protein K18829 mvpT; antitoxin VapB
D RPE_4065 PilT protein domain protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D RPE_4064 Rv0623 family protein transcription factor K19687 vapB; antitoxin VapB
D RPE_3246 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D RPE_3434 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D RPE_4137 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D RPE_2116 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RPE_3017 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RPE_2946 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RPE_2568 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPE_2789 protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D RPE_2969 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPE_4521 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rpe04090]
C 01504 Antimicrobial resistance genes [BR:rpe01504]
D RPE_3344 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RPE_1865 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RPE_3372 vanX D-Ala-D-Ala dipeptidase. Metallo peptidase. MEROPS family M15D K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RPE_1225 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3326 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RPE_3327 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D RPE_1226 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D RPE_1223 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D RPE_3479 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D RPE_1374 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D RPE_3323 periplasmic sensor signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RPE_3324 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RPE_2748 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rpe00537]
D RPE_0033 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rpe03100]
D RPE_R0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPE_R0061 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPE_R0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPE_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPE_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0068 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0048 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPE_R0038 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RPE_R0033 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RPE_R0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RPE_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RPE_R0052 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RPE_R0018 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RPE_R0042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RPE_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPE_R0070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPE_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPE_R0054 tRNA-His K14226 tRNA-His; tRNA His
D RPE_R0013 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RPE_R0062 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RPE_R0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPE_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RPE_R0039 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RPE_R0019 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPE_R0053 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPE_R0055 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPE_R0065 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RPE_R0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPE_R0064 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPE_R0041 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPE_R0009 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPE_R0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPE_R0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPE_R0067 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPE_R0002 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPE_R0030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPE_R0066 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPE_R0049 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RPE_R0051 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RPE_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPE_R0056 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPE_R0011 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPE_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPE_R0063 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPE_R0015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPE_R0060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPE_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPE_R0059 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPE_R0069 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D RPE_R0024 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D RPE_R0025 ssrA; prediction based on tmRNA website at Indiana University K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RPE_4151 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D RPE_3683 NAD-dependent epimerase/dehydratase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D RPE_4178 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RPE_3525 Pyrrolo-quinoline quinone K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D RPE_3914 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D RPE_1655 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RPE_4568 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RPE_1656 molybdopterin dehydrogenase, FAD-binding protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RPE_4570 Carbon-monoxide dehydrogenase (acceptor) K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RPE_1460 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RPE_4323 Carbon-monoxide dehydrogenase (acceptor) K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RPE_4569 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RPE_0986 thiamine pyrophosphate enzyme domain protein TPP-binding protein K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D RPE_0985 Indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D RPE_3529 pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RPE_3266 Alcohol dehydrogenase, zinc-binding domain protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D RPE_0845 coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D RPE_3222 Butyryl-CoA dehydrogenase K25759 iaaF; benzylmalonyl-CoA dehydrogenase [EC:1.3.3.17]
D RPE_4421 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RPE_4516 Electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D RPE_2800 Alcohol dehydrogenase, zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RPE_2304 Alcohol dehydrogenase, zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RPE_0040 Alcohol dehydrogenase, zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RPE_3959 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RPE_4918 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RPE_1500 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RPE_3958 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RPE_2302 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RPE_4187 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RPE_4145 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RPE_3645 Catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D RPE_2277 alpha/beta hydrolase fold K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RPE_4490 alpha/beta hydrolase fold K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RPE_2974 Redoxin domain protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RPE_4112 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RPE_4514 alkylhydroperoxidase, AhpD family K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D RPE_4513 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D RPE_4633 putative iron-dependent peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D RPE_3860 hydrogenases, Fe-only K06441 E1.12.7.2G; ferredoxin hydrogenase gamma subunit [EC:1.12.7.2]
D RPE_0711 Pirin domain protein domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RPE_4577 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D RPE_1813 amine oxidase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D RPE_3658 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RPE_3659 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RPE_0843 coenzyme PQQ biosynthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D RPE_3102 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RPE_3175 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RPE_0952 NADH dehydrogenase (quinone) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D RPE_0954 conserved hypothetical protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D RPE_0955 NADH dehydrogenase (quinone) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D RPE_2705 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RPE_2747 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RPE_2196 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RPE_2735 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RPE_0658 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RPE_2044 Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D RPE_3151 coproporphyrinogen III oxidase, anaerobic K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D RPE_1806 Radical SAM domain protein K22705 hpnP; hopanoid C-2 methylase [EC:2.1.1.-]
D RPE_0078 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RPE_1458 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RPE_1411 transferase hexapeptide repeat containing protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D RPE_0742 3-oxoacyl-(acyl-carrier-protein) synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D RPE_0202 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RPE_4180 lyso-ornithine lipid acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D RPE_0662 GCN5-related N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D RPE_1828 GCN5-related N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RPE_2001 Acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D RPE_2994 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RPE_3011 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RPE_0363 ornithine-acyl[acyl carrier protein] N-acyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D RPE_2112 glycosyl transferase, group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D RPE_3888 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D RPE_0837 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D RPE_4366 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D RPE_2743 DTW domain containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D RPE_1812 Squalene/phytoene synthase K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103]
D RPE_1434 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RPE_4576 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RPE_3100 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RPE_4816 PfkB domain protein K18478 yihV; sulfofructose kinase [EC:2.7.1.184]
D RPE_0380 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RPE_1944 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RPE_3277 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RPE_1958 L-carnitine dehydratase/bile acid-inducible protein F K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D RPE_3212 L-carnitine dehydratase/bile acid-inducible protein F K25761 iaaL; phenylsuccinyl-CoA transferase [EC:2.8.3.28]
D RPE_1621 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RPE_1072 Carboxylesterase, type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RPE_0251 Carboxylesterase, type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RPE_0936 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D RPE_2139 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RPE_4763 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RPE_3976 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RPE_0506 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RPE_1477 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RPE_2412 protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D RPE_1498 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RPE_4189 beta-lactamase domain protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D RPE_2868 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RPE_0836 ADP-ribosyl-(dinitrogen reductase) hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]
D RPE_3407 Serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RPE_1708 Serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RPE_2098 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RPE_0656 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RPE_3424 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RPE_0154 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RPE_0940 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RPE_3426 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RPE_3367 67 kDa myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D RPE_2507 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RPE_1811 Squalene/phytoene synthase K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D RPE_2767 peptidyl-prolyl cis-trans isomerase, cyclophilin type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RPE_2769 peptidyl-prolyl cis-trans isomerase, cyclophilin type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RPE_1699 Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D RPE_3824 AMP-dependent synthetase and ligase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D RPE_3802 AMP-dependent synthetase and ligase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D RPE_3218 AMP-dependent synthetase and ligase K25760 iaaB; indoleacetate---CoA ligase [EC:6.2.1.75]
D RPE_0012 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RPE_2585 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RPE_4646 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D RPE_1499 FAD dependent oxidoreductase K04755 fdx; ferredoxin, 2Fe-2S
D RPE_1476 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D RPE_0125 4Fe-4S ferredoxin, iron-sulfur binding domain protein K05524 fdxA; ferredoxin
D RPE_4522 nitrogen-fixing NifU domain protein K13819 K13819; NifU-like protein
D RPE_4524 NifQ family protein K15790 nifQ; nitrogen fixation protein NifQ
D RPE_2227 CitB domain protein K13795 citB; citrate/tricarballylate utilization protein
D RPE_2228 precorrin 3B synthase CobZ K13796 cobZ; tricarballylate dehydrogenase
D RPE_0618 von Willebrand factor, type A K02448 norD; nitric oxide reductase NorD protein
D RPE_0624 cytochrome c oxidase, subunit III K02164 norE; nitric oxide reductase NorE protein
D RPE_0623 conserved hypothetical protein K04747 norF; nitric oxide reductase NorF protein
D RPE_0620 ATPase associated with various cellular activities, AAA_5 K04748 norQ; nitric oxide reductase NorQ protein
D RPE_4528 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX
D RPE_4535 NifT/FixU family protein K02593 nifT; nitrogen fixation protein NifT
D RPE_4536 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D RPE_4537 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D RPE_4541 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D RPE_4529 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D RPE_4530 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D RPE_3090 flavodoxin K03839 fldA; flavodoxin I
D RPE_4518 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D RPE_4849 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D RPE_4515 ferredoxin like protein, FixX K03855 fixX; ferredoxin like protein
D RPE_4519 nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
D RPE_3892 aspartate/glutamate/uridylate kinase K00947 mosAB; molybdenum storage protein
D RPE_3893 aspartate/glutamate/uridylate kinase K00947 mosAB; molybdenum storage protein
D RPE_2262 conserved hypothetical protein K21694 cowN; N(2)-fixation sustaining protein CowN
C 99983 Lipid metabolism
D RPE_1213 acyl-CoA dehydrogenase domain protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RPE_0489 protein of unknown function DUF540 K06203 cysZ; CysZ protein
D RPE_0392 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
D RPE_2029 GCN5-related N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D RPE_4893 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D RPE_1490 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D RPE_2235 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D RPE_0062 HemY domain protein K02498 hemY; HemY protein
D RPE_0469 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D RPE_4741 conserved hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D RPE_1314 alpha/beta hydrolase fold K06049 bchO; magnesium chelatase accessory protein
D RPE_3676 alpha/beta hydrolase fold K06049 bchO; magnesium chelatase accessory protein
D RPE_2753 cyclase/dehydrase K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D RPE_2610 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D RPE_0346 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D RPE_3962 DoxX family protein K15977 K15977; putative oxidoreductase
D RPE_1950 DoxX family protein K15977 K15977; putative oxidoreductase
D RPE_3274 DoxX family protein K15977 K15977; putative oxidoreductase
D RPE_1734 GCN5-related N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RPE_2363 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D RPE_3286 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D RPE_4315 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D RPE_3744 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D RPE_0922 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D RPE_2918 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D RPE_0403 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D RPE_0405 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D RPE_0415 RNA binding S1 domain protein K06959 tex; protein Tex
C 99974 Translation
D RPE_4665 ABC transporter related K13926 rbbA; ribosome-dependent ATPase
D RPE_4147 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
D RPE_0726 putative mRNA 3-end processing factor K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D RPE_3405 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RPE_1060 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RPE_2509 trigger factor K03545 tig; trigger factor
D RPE_3730 UreE urease accessory domain protein K03187 ureE; urease accessory protein
D RPE_3729 Urease accessory protein UreF K03188 ureF; urease accessory protein
D RPE_1747 urease accessory protein UreG K03189 ureG; urease accessory protein
D RPE_3736 Urease accessory protein UreD K03190 ureD; urease accessory protein
D RPE_3030 SsrA-binding protein K03664 smpB; SsrA-binding protein
D RPE_1235 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D RPE_1244 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D RPE_1245 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RPE_1246 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RPE_1243 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D RPE_0360 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D RPE_2294 putative proteasome-type protease K07395 K07395; putative proteasome-type protease
D RPE_1660 predicted sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis K07402 xdhC; xanthine dehydrogenase accessory factor
D RPE_4368 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RPE_0103 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RPE_0657 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D RPE_4056 ATP-dependent endonuclease of the OLD family-like protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D RPE_0358 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D RPE_2120 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_2281 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_2279 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_3701 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_2109 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_0650 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_1646 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_1698 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_1894 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_0442 Excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D RPE_3377 DNA protecting protein DprA K04096 smf; DNA processing protein
D RPE_3556 Recombination protein MgsA K07478 ycaJ; putative ATPase
D RPE_3042 transposase, IS4 family K07481 K07481; transposase, IS5 family
D RPE_4005 putative transposase K07481 K07481; transposase, IS5 family
D RPE_1032 transposase, IS4 family K07481 K07481; transposase, IS5 family
D RPE_1033 transposase, IS4 family K07481 K07481; transposase, IS5 family
D RPE_1014 transposase IS3/IS911 family protein K07483 K07483; transposase
D RPE_1131 transposase IS3/IS911 family protein K07483 K07483; transposase
D RPE_3518 transposase IS3/IS911 family protein K07483 K07483; transposase
D RPE_2435 transposase IS3/IS911 family protein K07483 K07483; transposase
D RPE_1132 transposase IS3/IS911 family protein K07483 K07483; transposase
D RPE_4014 transposase IS3/IS911 family protein K07483 K07483; transposase
D RPE_1142 hypothetical protein K07483 K07483; transposase
D RPE_1118 hypothetical protein K07483 K07483; transposase
D RPE_1015 IS66 Orf2 family protein K07484 K07484; transposase
D RPE_1016 transposase IS66 K07484 K07484; transposase
D RPE_4013 IS66 Orf2 family protein K07484 K07484; transposase
D RPE_3517 IS66 Orf2 family protein K07484 K07484; transposase
D RPE_2436 IS66 Orf2 family protein K07484 K07484; transposase
D RPE_1133 IS66 Orf2 family protein K07484 K07484; transposase
D RPE_4012 transposase IS66 K07484 K07484; transposase
D RPE_3516 transposase IS66 K07484 K07484; transposase
D RPE_2437 transposase IS66 K07484 K07484; transposase
D RPE_1134 transposase IS66 K07484 K07484; transposase
D RPE_1566 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RPE_0533 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RPE_3809 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RPE_3777 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RPE_1700 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RPE_0619 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RPE_2293 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RPE_4214 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D RPE_2066 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D RPE_0481 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D RPE_2430 Integrase, catalytic region K07497 K07497; putative transposase
D RPE_1117 integrase, catalytic region K07497 K07497; putative transposase
D RPE_2653 hypothetical protein K07497 K07497; putative transposase
D RPE_1052 Integrase, catalytic region K07497 K07497; putative transposase
D RPE_3697 putative insertion sequence transposase protein K07499 K07499; putative transposase
C 99979 Viral proteins
C 99998 Others
D RPE_3060 phage shock protein A, PspA K03969 pspA; phage shock protein A
D RPE_4812 conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RPE_2514 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RPE_2624 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RPE_3047 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RPE_3198 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D RPE_2288 Na+ dependent nucleoside transporter domain protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D RPE_0317 intracellular septation protein A K06190 ispZ; intracellular septation protein
D RPE_1036 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D RPE_0270 peptidase M23B K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D RPE_2710 GTP-binding protein TypA K06207 typA; GTP-binding protein
D RPE_0794 anti-ECFsigma factor, ChrR K07167 chrR; putative transcriptional regulator
D RPE_0205 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D RPE_4079 AsmA family protein K07289 asmA; AsmA protein
D RPE_0904 AsmA family protein K07289 asmA; AsmA protein
D RPE_4809 protein of unknown function DUF107 K07340 ybbJ; inner membrane protein
D RPE_1666 putative efflux protein K01993 ABC-2.TX; HlyD family secretion protein
D RPE_4666 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein
D RPE_3954 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D RPE_3322 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D RPE_1933 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D RPE_1932 tetratricopeptide TPR_2 K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RPE_1935 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D RPE_4887 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D RPE_0902 periplasmic glucan biosynthesis protein, MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D RPE_4501 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D RPE_3106 phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D RPE_4881 ApaG domain protein K06195 apaG; ApaG protein
D RPE_3096 periplasmic copper-binding protein K07218 nosD; nitrous oxidase accessory protein
D RPE_3063 putative flavoprotein involved in K+ transport K07222 K07222; putative flavoprotein involved in K+ transport
D RPE_3147 heme utilization protein HuvX K07227 chuX; heme iron utilization protein
D RPE_1288 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D RPE_3099 NosL family protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RPE_3917 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D RPE_3339 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D RPE_1926 putative glycohydrolase K03791 K03791; putative chitinase
D RPE_0846 coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D RPE_0844 coenzyme PQQ synthesis D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D RPE_2332 Patatin K07001 K07001; NTE family protein
D RPE_3357 Patatin K07001 K07001; NTE family protein
D RPE_0649 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D RPE_0416 HAD-superfamily hydrolase, phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D RPE_2968 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RPE_2965 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RPE_3639 putative ribonuclease BN K07058 K07058; membrane protein
D RPE_4852 ribonuclease BN K07058 K07058; membrane protein
D RPE_1870 Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D RPE_4736 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D RPE_3864 conserved hypothetical protein K02351 K02351; putative membrane protein
D RPE_4441 LemA family protein K03744 lemA; LemA protein
D RPE_4322 LemA family protein K03744 lemA; LemA protein
D RPE_3061 LemA family protein K03744 lemA; LemA protein
D RPE_1367 SlyX family protein K03745 slyX; SlyX protein
D RPE_2399 CreA family protein K05805 creA; CreA protein
D RPE_0263 protein of unknown function DUF1304 K08987 K08987; putative membrane protein
D RPE_4314 conserved hypothetical protein 1620 K08990 ycjF; putative membrane protein
D RPE_3665 conserved hypothetical protein K08995 K08995; putative membrane protein
D RPE_0424 SecC-like protein K09858 K09858; SEC-C motif domain protein
D RPE_1046 Cupin 2, conserved barrel domain protein K11312 K11312; cupin 2 domain-containing protein
D RPE_1237 HupH hydrogenase expression protein K03618 hyaF; hydrogenase-1 operon protein HyaF
D RPE_1236 hydrogenase-1 expression HyaE K03619 hyaE; hydrogenase-1 operon protein HyaE
D RPE_4134 phosphate-starvation-inducible E K13256 psiE; protein PsiE
D RPE_4453 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D RPE_4321 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D RPE_0306 protein of unknown function UPF0005 K06890 K06890; uncharacterized protein
D RPE_4313 protein of unknown function DUF463, YcjX family protein K06918 K06918; uncharacterized protein
D RPE_2909 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D RPE_2854 CoA-binding domain protein K06929 K06929; uncharacterized protein
D RPE_3812 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D RPE_0731 conserved hypothetical protein K06953 K06953; uncharacterized protein
D RPE_2737 amine oxidase K06954 K06954; uncharacterized protein
D RPE_2899 conserved hypothetical protein K06975 K06975; uncharacterized protein
D RPE_1808 putative RND superfamily transporter K07003 K07003; uncharacterized protein
D RPE_1817 conserved hypothetical protein K07003 K07003; uncharacterized protein
D RPE_3886 conserved hypothetical protein K07005 K07005; uncharacterized protein
D RPE_3811 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein K07006 K07006; uncharacterized protein
D RPE_2970 conserved hypothetical protein K07018 K07018; uncharacterized protein
D RPE_0805 alpha/beta hydrolase fold K07019 K07019; uncharacterized protein
D RPE_1732 conserved hypothetical protein K07028 K07028; uncharacterized protein
D RPE_1371 Glyoxalase/bleomycin resistance protein/dioxygenase K07032 K07032; uncharacterized protein
D RPE_3970 GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein
D RPE_2282 yecA family protein K07039 K07039; uncharacterized protein
D RPE_4121 amidohydrolase 2 K07045 K07045; uncharacterized protein
D RPE_4430 protein of unknown function, zinc metallopeptidase putative K07054 K07054; uncharacterized protein
D RPE_1849 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RPE_4868 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RPE_0401 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D RPE_4462 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D RPE_4910 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D RPE_3662 permease K07089 K07089; uncharacterized protein
D RPE_0703 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D RPE_0716 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D RPE_3982 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D RPE_3083 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein
D RPE_1578 nuclear protein SET K07117 K07117; uncharacterized protein
D RPE_0054 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D RPE_3352 conserved hypothetical protein K07126 K07126; uncharacterized protein
D RPE_4720 Sel1-like protein K07126 K07126; uncharacterized protein
D RPE_2409 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D RPE_0409 peptidase S16, lon domain protein K07157 K07157; uncharacterized protein
D RPE_1658 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D RPE_1210 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D RPE_2343 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D RPE_3707 conserved hypothetical protein K09004 K09004; uncharacterized protein
D RPE_2917 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D RPE_0980 GatB/Yqey domain protein K09117 K09117; uncharacterized protein
D RPE_0048 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D RPE_2850 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D RPE_4053 conserved hypothetical protein K09144 K09144; uncharacterized protein
D RPE_1881 protein of unknown function UPF0153 K09160 K09160; uncharacterized protein
D RPE_1654 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D RPE_2736 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein
D RPE_0165 protein of unknown function DUF985 K09705 K09705; uncharacterized protein
D RPE_2393 protein of unknown function DUF188 K09768 K09768; uncharacterized protein
D RPE_0408 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D RPE_0698 conserved hypothetical protein K09795 K09795; uncharacterized protein
D RPE_0272 protein of unknown function DUF610, YibQ K09798 K09798; uncharacterized protein
D RPE_2043 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D RPE_1776 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D RPE_2599 conserved hypothetical protein K09803 K09803; uncharacterized protein
D RPE_3359 conserved hypothetical protein K09803 K09803; uncharacterized protein
D RPE_0323 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D RPE_4479 protein of unknown function DUF329 K09862 K09862; uncharacterized protein
D RPE_3393 protein of unknown function DUF482 K09919 K09919; uncharacterized protein
D RPE_4179 protein of unknown function DUF486 K09922 K09922; uncharacterized protein
D RPE_1988 conserved hypothetical protein K09924 K09924; uncharacterized protein
D RPE_1948 protein of unknown function DUF692 K09930 K09930; uncharacterized protein
D RPE_2180 conserved hypothetical protein K09937 K09937; uncharacterized protein
D RPE_4573 PepSY-associated TM helix domain protein K09939 K09939; uncharacterized protein
D RPE_0868 putative periplasmic ligand-binding sensor protein K09945 K09945; uncharacterized protein
D RPE_4108 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein
D RPE_1217 conserved hypothetical protein K09967 K09967; uncharacterized protein
D RPE_1218 conserved hypothetical protein K09967 K09967; uncharacterized protein
D RPE_2145 protein of unknown function DUF1321 K09985 K09985; uncharacterized protein
D RPE_0941 protein of unknown function DUF1285 K09986 K09986; uncharacterized protein
D RPE_4131 protein of unknown function DUF1013 K09987 K09987; uncharacterized protein
D RPE_2033 conserved hypothetical protein K09989 K09989; uncharacterized protein
D RPE_2749 conserved hypothetical protein K09991 K09991; uncharacterized protein
D RPE_3048 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
D RPE_0197 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 28, 2024