+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Ralstonia pickettii DTP0602

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E N234_14665 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] E N234_04245 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] E N234_14550 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E N234_13605 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] E N234_17915 ribonuclease N1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] E N234_15315 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases E N234_02575 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E N234_15355 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E N234_19565 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E N234_05610 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E N234_23005 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E N234_04905 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E N234_13825 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C Other RNA degradation factors D Chaperones E N234_17600 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E N234_36815 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E N234_15960 hypothetical protein K04043 dnaK; molecular chaperone DnaK E N234_08725 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E N234_03585 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E N234_08935 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E N234_36820 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E N234_13650 RNA-binding protein Hfq K03666 hfq; host factor-I protein E N234_25800 RNA-binding protein Hfq K03666 hfq; host factor-I protein E N234_33320 hypothetical protein K03666 hfq; host factor-I protein D Others E N234_23265 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E N234_13970 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E N234_06340 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E N234_04620 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E N234_05715 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E N234_17560 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E N234_18315 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] E N234_12995 ribonuclease K02553 rraA; regulator of ribonuclease activity A E N234_23705 ribonuclease K02553 rraA; regulator of ribonuclease activity A E N234_01780 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ E N234_13570 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024