+C Peptidases and inhibitors KO
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Peptidases and Inhibitors - Rhodopseudomonas palustris TIE-1
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AAspartic peptidases
B Family A1: pepsin family
B Family A2: retropepsin family
B Family A5: thermopsin family
B Family A8: signal peptidase II family
C Rpal_4860 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
B Family A22: presenilin family
B Family A24: type IV prepilin peptidase family
C Rpal_4198 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
B Family A25: gpr protease family
B Family A26: omptin family
B Family A28
B Family A31: HybD endopeptidase family
C Rpal_1157 hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
B Family A36
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ACysteine peptidases
B Family C1: papain family
B Family C2: calpain family
B Family C3: picornain family
B Family C4: NIa protease family
B Family C5
B Family C9
B Family C10: streptopain family
B Family C11: clostripain family
B Family C12: ubiquitin C-terminal hydrolase family
B Family C13: legumain family
B Family C14: caspase family
B Family C15: pyroglutamyl peptidase I family
C Rpal_2032 peptidase C15 pyroglutamyl peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
B Family C16
B Family C19: ubiquitin-specific protease family
B Family C25: gingipain family
B Family C26: gamma-glutamyl hydrolase family
C Rpal_0422 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
C Rpal_2498 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
C Rpal_1649 peptidase C26 K07010 K07010; putative glutamine amidotransferase
B Family C27
B Family C30
B Family C37
B Family C39
B Family C40
B Family C44
C Rpal_3501 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C Rpal_0959 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
C Rpal_2934 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C Rpal_4592 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
B Family C45
B Family C46: hedgehog family
B Family C47: staphopain family
B Family C48: Ulp1 endopeptidase family
B Family C50: separase family
B Family C54: Aut2 peptidase family
B Family C55: YopJ protease family
B Family C56: PfpI endopeptidase family
C Rpal_1491 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
C Rpal_2700 ThiJ/PfpI domain protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
B Family C57: vaccinia virus I7 peptidase family
B Family C58
B Family C59
B Family C60
B Family C63
B Family C64
B Family C65
B Family C67
B Family C69
B Family C70
B Family C75
B Family C76
B Family C78
B Family C79
B Family C82
C Rpal_4668 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
B Family C83
B Family C85
B Family C86
B Family C88
B Family C89
B Family C97
B Family C98
B Family C110
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AGlutamic peptidases
B Family G1
B Family G4
B Family G5: prenyl protease 2 family
C Rpal_3435 Abortive infection protein K07052 K07052; CAAX protease family protein
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AMetallo peptidases
B Family M1
B Family M2
B Family M3
C Rpal_0940 Peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
C Rpal_4665 oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
B Family M4: thermolysin family
B Family M5: mycolysin family
B Family M6: immune inhibitor A family
B Family M7: snapalysin family
B Family M8: leishmanolysin family
B Family M9
B Family M10
B Family M12: astacin/adamalysin family
B Family M13: neprilysin family
B Family M14: carboxypeptidase A family
B Family M15: zinc D-Ala-D-Ala carboxypeptidase family
B Family M16: pitrilysin family
C Rpal_4858 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
C Rpal_4857 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
B Family M17: leucyl aminopeptidase family
C Rpal_3470 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
C Rpal_4207 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B Family M18
B Family M19: membrane dipeptidase family
B Family M20
C Rpal_1410 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
C Rpal_0628 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C Rpal_0416 peptidase M20 K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
C Rpal_3303 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
B Family M23
B Family M24
C Rpal_0392 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
C Rpal_4033 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
B Family M26
B Family M27
B Family M28: aminopeptidase Y family
B Family M29: aminopeptidase T family
B Family M32: carboxypeptidase Taq family
B Family M34: anthrax lethal factor family
B Family M35: deuterolysin family
B Family M36: fungalysin family
B Family M38: beta-aspartyl dipeptidase family
B Family M41: FtsH endopeptidase family
C Rpal_1317 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
B Family M42: glutamyl aminopeptidase family
B Family M43: cytophagalysin family
B Family M44
B Family M48: Ste24 endopeptidase family
C Rpal_0855 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
C Rpal_4986 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
B Family M49: dipeptidyl-peptidase III family
B Family M50: S2P protease family
C Rpal_3261 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
B Family M54
B Family M55: DppA aminopeptidase family
B Family M56
B Family M67
B Family M72
B Family M73
B Family M74
C Rpal_0394 peptidase U6 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
B Family M80
B Family M82
B Family M85
B Family M88
B Family M90
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AAsparagine peptide lyases
B Family N1
B Family N8
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AMixed peptidases
B Family P1: DmpA aminopeptidase family
B Family P2
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ASerine peptidases
B Family S1: chymotrypsin family
C Rpal_2140 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
C Rpal_5052 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
C Rpal_4002 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
B Family S3: togavirin family
B Family S6
B Family S7: flavivirin family
B Family S8: subtilisin family
B Family S9: prolyl oligopeptidase family
C Rpal_1758 Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
B Family S10
B Family S11: D-Ala-D-Ala carboxypeptidase A family
C Rpal_3113 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
B Family S12: D-Ala-D-Ala carboxypeptidase B family
B Family S13: D-Ala-D-Ala peptidase C family
B Family S14: ClpP endopeptidase family
C Rpal_3309 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
B Family S15
B Family S16: lon protease family
C Rpal_1126 conserved hypothetical protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C Rpal_3307 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C Rpal_2272 ATPase associated with various cellular activities AAA_5 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C Rpal_3813 AAA ATPase central domain protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C Rpal_1150 ATPase associated with various cellular activities AAA_5 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C Rpal_1511 ATPase associated with various cellular activities AAA_5 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
B Family S21: assemblin family
B Family S24: LexA family
C Rpal_3249 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
C Rpal_3360 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
C Rpal_3373 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
B Family S26: signal peptidase I family
C Rpal_0892 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C Rpal_2971 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
B Family S28
B Family S31
B Family S32
B Family S33
C Rpal_4151 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C Rpal_3112 alpha/beta hydrolase fold K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
B Family S41: C-terminal processing peptidase family
C Rpal_0164 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
C Rpal_0593 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
B Family S45
B Family S49: protease IV family
C Rpal_0068 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
B Family S50
B Family S51
B Family S53
B Family S54: Rhomboid family
B Family S55: SpoIVB peptidase family
B Family S62
B Family S66
B Family S77: phage prohead processing peptidase family
B Family S78
C Rpal_2095 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
C Rpal_3979 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
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AThreonine peptidases
B Family T1: proteasome family
C Rpal_0310 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
B Family T2
B Family T3: gamma-glutamyltransferase family
C Rpal_0026 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C Rpal_0844 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C Rpal_2575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C Rpal_4906 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
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APeptidases of unknown catalytic type
B Family U32
C Rpal_1004 peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
C Rpal_1003 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
B Family U62
C Rpal_1346 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
C Rpal_0893 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
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APeptidase inhibitors
B Family I1: Kazal family
B Family I2: Kunitz - BPTI family
B Family I4: serpin family
B Family I11: ecotin family
B Family I17: WAP-type family
B Family I25: cystatin family
B Family I27: calpastatin family
B Family I32: IAP family
B Family I34: IA3 family
B Family I35: timp family
B Family I39: alpha2M family
C Rpal_2823 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
B Family I47: latexin family
B Family I49: proSAAS family
B Family I51: IC family
B Family I57: staphostatin B family
B Family I63
B Family I80
B Family I87
C Rpal_4004 HflC protein K04087 hflC; modulator of FtsH protease HflC
C Rpal_4005 HflK protein K04088 hflK; modulator of FtsH protease HflK
B Family I93
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: December 13, 2023
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Classification taken and modified from MEROPS