+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Rubrobacter radiotolerans

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D RradSPS_1390 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C RradSPS_1513 era: GTP-binding protein Era K03595 era; GTPase C RradSPS_1530 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C RradSPS_1288 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor C RradSPS_1415 NusA: transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA C RradSPS_1463 nusB: transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C RradSPS_1955 nusG: transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D RradSPS_0784 ksgA: dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D RradSPS_1378 TIGR00095: RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D RradSPS_1520 TIGR00046: RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D RradSPS_2768 gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D RradSPS_1507 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D RradSPS_0782 TIGR00096: putative S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D RradSPS_1461 tly: hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D RradSPS_1959 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D RradSPS_1606 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D RradSPS_0733 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D RradSPS_2359 TIGR00048: 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D RradSPS_1461 tly: hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D RradSPS_1448 TIGR00093: pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D RradSPS_1489 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C RradSPS_0688 rimI: ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C RradSPS_1396 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C RradSPS_2399 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor B rRNA processing factors C RradSPS_1390 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] C RradSPS_1364 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases B GTPases C RradSPS_1513 era: GTP-binding protein Era K03595 era; GTPase C RradSPS_1444 ribosome-associated GTPase EngA K03977 engA; GTPase C RradSPS_1530 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C RradSPS_1435 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C RradSPS_1592 Putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C RradSPS_1332 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C RradSPS_1418 rbfA: ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C RradSPS_1414 Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C RradSPS_0003 hypothetical protein K14761 rlbA; ribosome-associated protein C RradSPS_1528 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein C RradSPS_1516 TIGR00043: probable rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor C RradSPS_1562 yfiA: ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor C RradSPS_1993 TIGR00092: GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C RradSPS_1381 putative metal-binding possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024