+D GENES KO
#
KEGG Orthology (KO) - Ralstonia solanacearum CFBP2957
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rsc00010]
D RCFBP_11677 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RCFBP_11268 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RCFBP_20901 fbaA; FRUCTOSE-BISPHOSPHATE ALDOLASE PROTEIN K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RCFBP_11324 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RCFBP_10700 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RCFBP_20903 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RCFBP_21134 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RCFBP_20983 putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RCFBP_20305 eno; enolase, phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RCFBP_10194 ttuE; Pyruvate kinase; tartrate degradation K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RCFBP_20902 pykA; pyruvate kinase II, glucose-stimulated K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RCFBP_20012 ppsA; Phosphoenolpyruvate synthase. Pyruvate,water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RCFBP_11606 pdhA; pyruvate dehydrogenase, decarboxylase subunit E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RCFBP_11607 pdhB; Dihydrolipoyllysine-residue succinyltransferase, component of pyruvate dehydrogenase complex (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20867 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RCFBP_10307 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11485 putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11285 NAD-dependent mannitol dehydrogenase (Fragment) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RCFBP_20799 putative NADP-dependent alcohol dehydrogenase or mannitol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_10309 aldA; Aldehyde dehydrogenase (NAD(+)) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RCFBP_11432 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RCFBP_20723 cpsG; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RCFBP_21430 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:rsc00020]
D RCFBP_11394 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RCFBP_11381 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RCFBP_20809 acnA; aconitate hydratase protein K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RCFBP_10910 icd; Isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RCFBP_20159 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20919 sucD; Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RCFBP_20920 sucC; Succinate-CoA ligase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RCFBP_11391 sdhA; succinate dehydrogenase, catalytic and NAD/flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RCFBP_11392 sdhB; succinate dehydrogenase, Fe-S protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RCFBP_11389 sdhC; succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RCFBP_11390 sdhD; succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhC K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RCFBP_11429 fumA; Iron-dependent fumarate hydratase protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RCFBP_11387 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RCFBP_21430 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RCFBP_11606 pdhA; pyruvate dehydrogenase, decarboxylase subunit E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RCFBP_11607 pdhB; Dihydrolipoyllysine-residue succinyltransferase, component of pyruvate dehydrogenase complex (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rsc00030]
D RCFBP_11677 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RCFBP_21396 putative 6-phosphogluconolactonase (pgl) K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D RCFBP_20808 putative exported lactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D RCFBP_10578 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RCFBP_10699 tktA; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RCFBP_20202 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RCFBP_20201 rpiA; Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI) K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RCFBP_20467 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RCFBP_20723 cpsG; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RCFBP_21093 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RCFBP_20446 gyaR; Glyoxylate reductase (Glycolate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RCFBP_21043 gntK; gluconate kinase 2 in GNT I system, thermoresistant K00851 idnK; gluconokinase [EC:2.7.1.12]
D RCFBP_10195 ttuD; Hydroxypyruvate reductase oxidoreductase protein; tartrate degradation K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_20996 ttuD; hydroxypyruvate reductase oxidoreductase protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_20901 fbaA; FRUCTOSE-BISPHOSPHATE ALDOLASE PROTEIN K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RCFBP_11268 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:rsc00040]
D RCFBP_20568 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RCFBP_11155 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RCFBP_10578 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:rsc00051]
D RCFBP_20723 cpsG; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RCFBP_11268 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RCFBP_10597 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RCFBP_20901 fbaA; FRUCTOSE-BISPHOSPHATE ALDOLASE PROTEIN K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RCFBP_11324 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RCFBP_10596 fruA; fused fructose-specific PTS enzymes: IIBcomponent; IIC components K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RCFBP_21141 PTS system fructose IIA component (phosphoenolpyruvate-dependent sugar phosphotransferase system) K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rsc00052]
D RCFBP_11155 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RCFBP_20723 cpsG; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism [PATH:rsc00053]
D RCFBP_20568 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_20395 gudD; D-glucarate dehydratase (GDH) (GlucD) K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
C 00500 Starch and sucrose metabolism [PATH:rsc00500]
D RCFBP_11155 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RCFBP_10201 egl; Endoglucanase precursor (Endo-1,4-beta-glucanase) (Cellulase) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RCFBP_20723 cpsG; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RCFBP_11677 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rsc00520]
D RCFBP_20647 putative Beta-hexosaminidase A precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RCFBP_20409 nagZ; Beta-hexosaminidase; N-acetyl-beta-glucosaminidase; Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RCFBP_21275 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RCFBP_11507 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RCFBP_21276 glmU; bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RCFBP_20987 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RCFBP_20584 gph; 2-phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D RCFBP_20967 putative Aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D RCFBP_20970 putative sugar-phosphate nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RCFBP_10497 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RCFBP_10848 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RCFBP_20105 arnC; Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ((Ara4FN transferase) (EC 2.7.8.n1) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D RCFBP_20108 polysaccharide deacetylase; protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D RCFBP_20723 cpsG; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RCFBP_11155 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RCFBP_20568 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RCFBP_21141 PTS system fructose IIA component (phosphoenolpyruvate-dependent sugar phosphotransferase system) K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RCFBP_11677 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RCFBP_10992 putative Ferredoxin--NAD(+) reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:rsc00620]
D RCFBP_11432 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RCFBP_11606 pdhA; pyruvate dehydrogenase, decarboxylase subunit E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RCFBP_11607 pdhB; Dihydrolipoyllysine-residue succinyltransferase, component of pyruvate dehydrogenase complex (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_10307 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11485 putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_20867 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RCFBP_11285 NAD-dependent mannitol dehydrogenase (Fragment) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RCFBP_20799 putative NADP-dependent alcohol dehydrogenase or mannitol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RCFBP_10194 ttuE; Pyruvate kinase; tartrate degradation K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RCFBP_20902 pykA; pyruvate kinase II, glucose-stimulated K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RCFBP_20264 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RCFBP_10675 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RCFBP_10674 accC; Biotin carboxylase (Acetyl-CoA carboxylase subunit A) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RCFBP_11406 accD; Acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RCFBP_10093 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RCFBP_21268 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_10309 aldA; Aldehyde dehydrogenase (NAD(+)) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RCFBP_21013 putative CoA TRANSFERASE; exported protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D RCFBP_10306 ldhA; fermentative D-lactate dehydrogenase, NAD-dependent K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D RCFBP_10783 putative D-lactate dehydrogenase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RCFBP_20961 gloA; glyoxalase I, nickel isomerase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RCFBP_11494 gloB; Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RCFBP_10212 putative enzyme with metallo-hydrolase/oxidoreductase domain K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RCFBP_21231 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RCFBP_20446 gyaR; Glyoxylate reductase (Glycolate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RCFBP_11271 maeB; NAD(P)-dependent malic enzyme; bifunctional: Malate dehydrogenase (N-terminal); Phosphate acetyltransferase (C-terminal) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RCFBP_10693 maeB; NAD(P)-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RCFBP_11387 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RCFBP_11429 fumA; Iron-dependent fumarate hydratase protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RCFBP_11073 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RCFBP_21430 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RCFBP_20012 ppsA; Phosphoenolpyruvate synthase. Pyruvate,water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RCFBP_20067 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11317 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rsc00630]
D RCFBP_20071 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RCFBP_11432 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RCFBP_20067 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RCFBP_11387 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RCFBP_11394 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RCFBP_11381 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RCFBP_20809 acnA; aconitate hydratase protein K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11641 phaB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RCFBP_10870 phaB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RCFBP_10782 glcD; Glycolate oxidase subunit glcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RCFBP_10781 glcE; Glycolate oxidase subunit glcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RCFBP_10780 glcF; Glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RCFBP_21231 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RCFBP_20446 gyaR; Glyoxylate reductase (Glycolate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RCFBP_10577 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RCFBP_20438 gph; phosphoglycolate phosphatase protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RCFBP_20684 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RCFBP_10181 gcvP; glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RCFBP_10183 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_10182 gcvH; glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactor K02437 gcvH; glycine cleavage system H protein
D RCFBP_10198 gcl; Tartronate-semialdehyde synthase (glyoxylate carboligase) K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D RCFBP_10197 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D RCFBP_10196 glxR; tartronic semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RCFBP_10997 3-hydroxyisobutyrate dehydrogenase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RCFBP_10195 ttuD; Hydroxypyruvate reductase oxidoreductase protein; tartrate degradation K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_20996 ttuD; hydroxypyruvate reductase oxidoreductase protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_11048 fdhA; formate dehydrogenase, alpha subunit (Fe4S4 domain) K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RCFBP_11049 fdhB; Formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RCFBP_11051 putative formate dehydrogenase, cytochrome b556(fdo) subunit (fdoI) K00127 fdoI; formate dehydrogenase subunit gamma
D RCFBP_20655 putative metal-dependent hydrolase cyclase (arylformamidase) K07130 kynB; arylformamidase [EC:3.5.1.9]
D RCFBP_11459 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:rsc00640]
D RCFBP_11432 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RCFBP_11496 prpE; Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RCFBP_21013 putative CoA TRANSFERASE; exported protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D RCFBP_11803 putative pyruvate dehydrogenase e1 component (Alpha subunit) oxidoreductase protein K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RCFBP_11804 putative pyruvate decarboxylase e1 (Beta subunit) oxidoreductase protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RCFBP_11805 putative dihydrolipoamide acetyltransferase (Component e2 of pyruvate dehydrogenase complex) protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_21219 putative acyl CoA dehydrogenase oxidoreductase protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RCFBP_10565 putative NADPH:quinone reductase, GroES-like domain K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_20264 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RCFBP_10675 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RCFBP_10674 accC; Biotin carboxylase (Acetyl-CoA carboxylase subunit A) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RCFBP_11406 accD; Acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RCFBP_21416 puuE; 4-aminobutyrate aminotransferase, PLP-dependent K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RCFBP_20920 sucC; Succinate-CoA ligase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RCFBP_20919 sucD; Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RCFBP_11384 prpC; methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RCFBP_11382 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D RCFBP_11385 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D RCFBP_11211 mgsA; Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:rsc00650]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11371 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RCFBP_21250 3-HYDROXYBUTYRYL-COA DEHYDROGENASE K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RCFBP_11768 fadB; fused 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RCFBP_21010 putative 3-HYDROXYACYL-COA DEHYDROGENASE OXIDOREDUCTASE K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_21219 putative acyl CoA dehydrogenase oxidoreductase protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RCFBP_11639 phaC; Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RCFBP_20471 phaZ; poly[D(-)-3-Hydroxybutyrate] depolymerase (PHB depolymerase) K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RCFBP_11801 putative poly[D(-)-3-Hydroxybutyrate] depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RCFBP_11641 phaB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RCFBP_10870 phaB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RCFBP_11391 sdhA; succinate dehydrogenase, catalytic and NAD/flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RCFBP_11392 sdhB; succinate dehydrogenase, Fe-S protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RCFBP_11389 sdhC; succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RCFBP_11390 sdhD; succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhC K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RCFBP_21416 puuE; 4-aminobutyrate aminotransferase, PLP-dependent K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RCFBP_21417 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_20706 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_11780 Fe-containing alcohol dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D RCFBP_21232 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RCFBP_11566 atoD; 3-oxoacid CoA-transferase, alpha subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RCFBP_11567 atoA; 3-oxoacid CoA-transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RCFBP_11568 bdhA; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RCFBP_20092 phaY; D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D RCFBP_11312 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RCFBP_20077 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RCFBP_11313 ilvH; Acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rsc00660]
D RCFBP_11312 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RCFBP_20077 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RCFBP_11313 ilvH; Acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RCFBP_20920 sucC; Succinate-CoA ligase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RCFBP_20919 sucD; Succinate-CoA ligase (GDP-forming), alpha subunit, NAD(P)-binding K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RCFBP_11395 leuC; 3-isopropylmalate isomerase, subunit with leuD K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RCFBP_11396 leuD; 3-isopropylmalate isomerase, subunit with LeuC K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RCFBP_11397 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rsc00562]
D RCFBP_20273 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RCFBP_20180 iolG; Inositol 2-dehydrogenase involved in myo-inositol catabolism K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RCFBP_20196 putative oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RCFBP_20192 conserved protein of unknown function (sugar epimerase domain) K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D RCFBP_20183 iolE; Protein IolE involved in myo-inositol catabolism K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D RCFBP_20184 putative acetolactate synthase protein (iolD) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D RCFBP_20182 iolB; myo-inositol catabolism protein, protein iolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D RCFBP_20185 putative Fructokinase (iolC) K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D RCFBP_11324 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rsc00190]
D RCFBP_11326 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RCFBP_11327 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RCFBP_11328 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RCFBP_11329 nuoD; NADH-ubiquinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RCFBP_11330 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RCFBP_11331 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RCFBP_11332 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RCFBP_11333 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RCFBP_11334 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RCFBP_11335 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RCFBP_11336 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RCFBP_11337 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RCFBP_11338 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RCFBP_11339 nuoN; NADH-quinone oxidoreductase, subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RCFBP_11163 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RCFBP_11391 sdhA; succinate dehydrogenase, catalytic and NAD/flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RCFBP_11392 sdhB; succinate dehydrogenase, Fe-S protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RCFBP_11389 sdhC; succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RCFBP_11390 sdhD; succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhC K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RCFBP_10522 petA; Cytochrome bC1 complex (ubiquinol:ferricytochrome c oxidoreductase), Rieske iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RCFBP_10523 petB; cytochrome bC1 complex (ubiquinol:ferricytochrome c oxidoreductase), transmembrane subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RCFBP_10524 petC; Cytochrome bC1 complex (ubiquinol:ferricytochrome c oxidoreductase), transmembrane subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RCFBP_21115 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RCFBP_10542 cyoD; cytochrome o ubiquinol oxidase, subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D RCFBP_21120 coxC; cytochrome C oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RCFBP_21124 coxA; cytochrome C oxidase polypeptide I (cytochrome AA3 subunit 1) K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RCFBP_21125 coxB; cytochrome C oxidase polypeptide II precursor (cytochrome AA3 subunit 2) K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RCFBP_21122 ctaG; Cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RCFBP_21116 ctaA; cytochrome C oxidase assembly protein, AA3 subunit-controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RCFBP_20151 ccoN; Cytochrome C oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RCFBP_20150 ccoO; Cytochrome C oxidase cbb3-type, mono-heme subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RCFBP_20149 ccoQ; Cytochrome C oxidase cbb3-type, membrane subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RCFBP_20148 ccoP; Cytochrome C oxidase cbb3-type, di-heme subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RCFBP_10541 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D RCFBP_10540 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D RCFBP_10539 cyoA; cytochrome o ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D RCFBP_10220 SoxD; sulfite oxidation cytochrome c-551 K08738 CYC; cytochrome c
D RCFBP_10147 atpA; ATP synthase, F1 sector, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RCFBP_10149 atpD; ATP synthase, F1 sector, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RCFBP_10148 atpG; ATP synthase, F1 sector, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RCFBP_10146 atpH; ATP synthase, F1 sector, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RCFBP_10150 atpC; ATP synthase, F1 sector, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RCFBP_10143 atpB; ATP synthase, F0 sector, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RCFBP_10145 atpF; ATP synthase, F0 sector, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RCFBP_10144 atpE; ATP synthase, F0 sector, subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RCFBP_11082 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RCFBP_11515 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:rsc00710]
D RCFBP_20903 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RCFBP_10700 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RCFBP_20901 fbaA; FRUCTOSE-BISPHOSPHATE ALDOLASE PROTEIN K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RCFBP_11268 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RCFBP_10699 tktA; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RCFBP_20201 rpiA; Ribose-5-phosphate isomerase A (Phosphoriboisomerase A) (PRI) K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RCFBP_11324 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RCFBP_10578 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RCFBP_11073 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RCFBP_11271 maeB; NAD(P)-dependent malic enzyme; bifunctional: Malate dehydrogenase (N-terminal); Phosphate acetyltransferase (C-terminal) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RCFBP_10693 maeB; NAD(P)-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RCFBP_11387 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rsc00680]
D RCFBP_20867 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RCFBP_20868 ESD; S-formylglutathione hydrolase (FGH) (Esterase D) K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RCFBP_11048 fdhA; formate dehydrogenase, alpha subunit (Fe4S4 domain) K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RCFBP_11049 fdhB; Formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RCFBP_11051 putative formate dehydrogenase, cytochrome b556(fdo) subunit (fdoI) K00127 fdoI; formate dehydrogenase subunit gamma
D RCFBP_20684 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RCFBP_10195 ttuD; Hydroxypyruvate reductase oxidoreductase protein; tartrate degradation K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_20996 ttuD; hydroxypyruvate reductase oxidoreductase protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_20305 eno; enolase, phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RCFBP_11073 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RCFBP_11387 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RCFBP_20901 fbaA; FRUCTOSE-BISPHOSPHATE ALDOLASE PROTEIN K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RCFBP_11268 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RCFBP_11432 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RCFBP_20012 ppsA; Phosphoenolpyruvate synthase. Pyruvate,water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RCFBP_21134 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RCFBP_20983 putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RCFBP_21431 serA; D-3-phosphoglycerate dehydrogenase / D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RCFBP_20578 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RCFBP_11649 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RCFBP_20154 putative phosphosulfolactate phosphohydrolase-related protein (comB) K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:rsc00910]
D RCFBP_21106 nasF; Nitrate ABC transporter, periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RCFBP_21107 nasE; nitrate ABC transporter K15577 nrtB; nitrate/nitrite transport system permease protein
D RCFBP_21108 nasD; nitrate ABC transporter, ATP-binding component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RCFBP_21238 conserved protein of unknown function; putative 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RCFBP_21338 Putative 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RCFBP_11842 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RCFBP_21004 gdhA; glutamate dehydrogenase, NADP-specific, oxidoreductase protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RCFBP_10485 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RCFBP_10486 gltD; glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RCFBP_21216 can; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rsc00920]
D RCFBP_20089 cysP; thiosulfate transport protein; ABC superfamily, periplasmic and binding component K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RCFBP_20084 cysT; thiosulfate transport protein; ABC superfamily, membrane component K02046 cysU; sulfate/thiosulfate transport system permease protein
D RCFBP_20083 cysW; thiosulfate transport protein; ABC superfamily, membrane component K02047 cysW; sulfate/thiosulfate transport system permease protein
D RCFBP_20082 cysA; thiosulfate transport protein; ABC transporter, ATP-binding component K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RCFBP_10073 putative ABC transporter, periplasmic-binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D RCFBP_20235 putative ABC transporter, periplasmic-binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D RCFBP_20233 putative ABC-type transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D RCFBP_20234 putative ABC-type multidrug transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RCFBP_11005 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RCFBP_11004 cysD; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RCFBP_10261 cysC; Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D RCFBP_11003 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RCFBP_20603 sorA; cytrochrome C oxidoreductase subunit A K05301 sorA; sulfite dehydrogenase (cytochrome) subunit A [EC:1.8.2.1]
D RCFBP_10224 putative cytochrome of the thiosulfate-oxidizing multi-enzyme system, soxA homolog K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RCFBP_10225 putative cytochrome of the thiosulfate-oxidizing multi-enzyme system, soxX homolog K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RCFBP_10221 soxY; Sulphur oxidation protein K17226 soxY; sulfur-oxidizing protein SoxY
D RCFBP_10222 soxZ; Sulfur oxidation protein K17227 soxZ; sulfur-oxidizing protein SoxZ
D RCFBP_10227 putative 5'-nucleotidase, soxB homolog K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D RCFBP_11001 cysI; Sulfite reductase, beta subunit (hemoprotein) K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RCFBP_11520 putative nad(Fad)-dependent dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RCFBP_10218 soxF; Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RCFBP_10217 putative cytochrome c, soxE homolog K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D RCFBP_11166 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RCFBP_20271 cysE; Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RCFBP_21418 metX; Homoserine 0-acetyltransferase protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RCFBP_11758 alkK; Medium-chain-fatty-acid-CoA ligase (Medium-chain acyl-CoA synthetase) K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RCFBP_20556 putative Butyryl-CoA dehydrogenase (bcd) K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RCFBP_21011 putative putative acyl-CoA dehydrogenase oxidoreductase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rsc00061]
D RCFBP_20264 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RCFBP_10675 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RCFBP_10674 accC; Biotin carboxylase (Acetyl-CoA carboxylase subunit A) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RCFBP_11406 accD; Acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RCFBP_20425 acpP; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D RCFBP_21050 Acyl carrier protein K02078 acpP; acyl carrier protein
D RCFBP_20427 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RCFBP_20428 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RCFBP_21057 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-acp synthase) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RCFBP_20424 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase (KAS) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RCFBP_11210 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_11080 putative deshydrogenase oxydoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20426 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20940 fabG; 3-ketoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_21049 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20018 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RCFBP_20261 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RCFBP_10602 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_21380 putative long-chain-fatty-acid--coa ligase protein (fadD2) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rsc00071]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21009 fadA; 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_11768 fadB; fused 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RCFBP_21010 putative 3-HYDROXYACYL-COA DEHYDROGENASE OXIDOREDUCTASE K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RCFBP_21219 putative acyl CoA dehydrogenase oxidoreductase protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RCFBP_11365 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RCFBP_20939 fadE; Acyl-coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D RCFBP_20659 dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RCFBP_10602 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_21380 putative long-chain-fatty-acid--coa ligase protein (fadD2) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_20194 putative ferredoxin--NAD(+) reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RCFBP_20867 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RCFBP_10307 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11485 putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rsc00561]
D RCFBP_10195 ttuD; Hydroxypyruvate reductase oxidoreductase protein; tartrate degradation K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_20996 ttuD; hydroxypyruvate reductase oxidoreductase protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11285 NAD-dependent mannitol dehydrogenase (Fragment) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RCFBP_20799 putative NADP-dependent alcohol dehydrogenase or mannitol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RCFBP_10393 glpK; Glycerol kinase (ATP:glycerol 3-phosphotransferase) K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RCFBP_20429 plsX; Fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RCFBP_10850 plsY; 1-acyl glycerol-3-phosphate synthetase component K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RCFBP_20735 plsC; Phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RCFBP_20959 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RCFBP_11304 dgkA; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RCFBP_11305 putative glycosyl transferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:rsc00564]
D RCFBP_21130 gpsA; glycerol-3-phosphate dehydrogenase (GPDH) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RCFBP_10400 glpD; Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RCFBP_10850 plsY; 1-acyl glycerol-3-phosphate synthetase component K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RCFBP_20735 plsC; Phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RCFBP_20959 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RCFBP_11304 dgkA; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RCFBP_20160 ugpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RCFBP_20979 putative glycerophosphoryl diester phosphodiesterase, periplasmic protein (glpQ) K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RCFBP_10310 eutB; Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D RCFBP_10311 eutC; Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D RCFBP_20024 Putative phosphatidate cytidylyltransferase (cdsA) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RCFBP_11316 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RCFBP_11315 psd; Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RCFBP_10691 pgpA; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RCFBP_21014 putative cardiolipin synthase; exported protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RCFBP_20405 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rsc00592]
D RCFBP_21009 fadA; 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rsc01040]
D RCFBP_10976 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RCFBP_11675 putative lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RCFBP_21007 putative Acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rsc00230]
D RCFBP_11341 putative ADP-ribose diphosphatase, nudix domain K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RCFBP_20723 cpsG; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RCFBP_21093 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RCFBP_11410 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RCFBP_11205 purD; phosphoribosylglycinamide synthetase (GAR synthetase) K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RCFBP_10972 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RCFBP_11680 purL; phosphoribosylformyl-glycineamide synthetase (FGAM synthetase) K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RCFBP_10824 purM; phosphoribosylaminoimidazole synthetase (AIR synthetase) K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RCFBP_20898 purK; phosphoribosylaminoimidazole carboxylase (AIR carboxylase), ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RCFBP_20899 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RCFBP_20900 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RCFBP_10730 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RCFBP_20977 purH; bifunctional: IMP cyclohydrolase (N-terminal); phosphoribosylaminoimidazolecarboxamide formyltransferase (C-terminal) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RCFBP_21071 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RCFBP_20229 surE; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RCFBP_10846 conserved protein of unknown function K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D RCFBP_11637 conserved protein of unknown function K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RCFBP_10648 putative hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RCFBP_20004 guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RCFBP_20222 ndk; Nucleoside diphosphate kinase (NDK) (NDP kinase) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RCFBP_11254 rdgB; Nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RCFBP_11294 xdhA; xanthine dehydrogenase, small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D RCFBP_11293 xdhB; xanthine dehydrogenase, large subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D RCFBP_20002 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RCFBP_20275 putative glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RCFBP_11290 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RCFBP_11259 gmk; guanylate kinase (GMP kinase) K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RCFBP_10655 nrdA; Ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RCFBP_10656 nrdB; ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RCFBP_10482 dgt; deoxyguanosine triphosphate triphosphohydrolase (dGTPase) K01129 dgt; dGTPase [EC:3.1.5.1]
D RCFBP_20376 putative phage hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RCFBP_11262 putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RCFBP_10032 conserved protein of unknown function K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RCFBP_11516 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RCFBP_11571 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D RCFBP_20207 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RCFBP_10670 putative adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D RCFBP_11291 add; Adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D RCFBP_10862 adk; Adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D RCFBP_11800 putative metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RCFBP_20734 apaH; Diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D RCFBP_10261 cysC; Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D RCFBP_11005 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RCFBP_11004 cysD; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RCFBP_11451 putative flavoprotein involved in K+ transport, COG2072 K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113]
D RCFBP_11278 putative transthyretin-like protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RCFBP_11273 conserved protein of unknown function, transthyretin domain K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D RCFBP_11274 putative Polysaccharide deacetylase; xylanase/chitin deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5]
D RCFBP_10205 alc; allantoicase (Allantoate amidinohydrolase) K01477 alc; allantoicase [EC:3.5.3.4]
D RCFBP_10206 allA; Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D RCFBP_11356 ureC; Urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RCFBP_11355 ureB; Urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RCFBP_11353 ureA; Urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:rsc00240]
D RCFBP_11499 carB; Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate synthetase ammonia chain) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RCFBP_11497 carA; Carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate synthetase glutamine chain) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RCFBP_20737 pyrB; aspartate carbamoyltransferase protein (catalytic sub-unit) K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RCFBP_20736 pyrC; Dihydroorotase, Carbamoylaspartic dehydrase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RCFBP_20995 pyrC; dihydro-orotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RCFBP_11626 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RCFBP_21314 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RCFBP_10688 pyrF; Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RCFBP_20027 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RCFBP_20222 ndk; Nucleoside diphosphate kinase (NDK) (NDP kinase) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RCFBP_11200 conserved protein of unknown function, Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RCFBP_20308 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RCFBP_20573 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RCFBP_20229 surE; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RCFBP_10846 conserved protein of unknown function K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D RCFBP_11208 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RCFBP_20738 pyrR; PyrR bifunctional protein: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase (UPRTase)] K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RCFBP_11601 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RCFBP_11055 dcd; Deoxycytidine triphosphate deaminase (dCTP deaminase) K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RCFBP_10655 nrdA; Ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RCFBP_10656 nrdB; ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RCFBP_20376 putative phage hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RCFBP_11789 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RCFBP_10962 dut; deoxyuridinetriphosphatase (fragment) K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RCFBP_20521 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RCFBP_10747 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RCFBP_20683 ydfG; NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D RCFBP_20475 rutE; oxidoreductase subunit of the alternative pyrimidine degradation pathway K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rsc00250]
D RCFBP_10979 nadB; quinolinate synthetase, B subunit, L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RCFBP_20120 ansB; Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RCFBP_20054 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RCFBP_20100 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RCFBP_10845 argG; Argininosuccinate synthase (Citrulline--aspartate ligase) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RCFBP_11067 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RCFBP_20207 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RCFBP_10730 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RCFBP_20737 pyrB; aspartate carbamoyltransferase protein (catalytic sub-unit) K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RCFBP_21416 puuE; 4-aminobutyrate aminotransferase, PLP-dependent K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RCFBP_21417 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_20706 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_10485 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RCFBP_10486 gltD; glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RCFBP_21004 gdhA; glutamate dehydrogenase, NADP-specific, oxidoreductase protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RCFBP_10167 putA; multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RCFBP_11499 carB; Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate synthetase ammonia chain) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RCFBP_11497 carA; Carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate synthetase glutamine chain) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RCFBP_21275 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RCFBP_11410 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rsc00260]
D RCFBP_20262 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RCFBP_11399 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RCFBP_20099 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RCFBP_11159 thrB; Homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D RCFBP_20098 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RCFBP_20607 ltaA; Low Spcificity L-Threonine Aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RCFBP_21062 ltaA; low specificity L-threonine aldolase protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RCFBP_20684 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RCFBP_21231 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RCFBP_20446 gyaR; Glyoxylate reductase (Glycolate reductase) K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RCFBP_10195 ttuD; Hydroxypyruvate reductase oxidoreductase protein; tartrate degradation K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_20996 ttuD; hydroxypyruvate reductase oxidoreductase protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RCFBP_21134 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RCFBP_20983 putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RCFBP_21431 serA; D-3-phosphoglycerate dehydrogenase / D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RCFBP_20578 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RCFBP_11649 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RCFBP_20683 ydfG; NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D RCFBP_10181 gcvP; glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RCFBP_10183 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_10182 gcvH; glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactor K02437 gcvH; glycine cleavage system H protein
D RCFBP_11316 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RCFBP_10180 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RCFBP_20520 putative threonine dehydratase (tdcB) K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RCFBP_21034 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RCFBP_11405 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RCFBP_11403 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rsc00270]
D RCFBP_20271 cysE; Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RCFBP_11647 metC; cystathionine beta-lyase, PLP-dependent (beta-cystathionase) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RCFBP_11845 putative cystathionine beta-lyase, PLP-dependent (MetC) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RCFBP_21197 metHa; 5-methyltetrahydrofolate-homocysteine methyltransferase protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RCFBP_21198 metHb; 5-methyltetrahydrofolate-homocysteine methyltransferase protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RCFBP_21319 metK; methionine adenosyltransferase 1 K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RCFBP_10191 solI; Acyl-homoserine-lactone synthase, autoinducer synthesis protein solI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D RCFBP_10087 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RCFBP_11637 conserved protein of unknown function K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RCFBP_20470 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RCFBP_10010 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_20378 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_21350 ahcY; Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RCFBP_20262 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RCFBP_11399 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RCFBP_20099 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RCFBP_21418 metX; Homoserine 0-acetyltransferase protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RCFBP_11558 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RCFBP_20907 ilvE; Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RCFBP_21143 conserved protein of unknown function K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RCFBP_21142 gshB; glutathione synthetase (glutathione GSH synthase) K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RCFBP_11166 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RCFBP_11387 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RCFBP_10180 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RCFBP_20564 cysM; cysteine synthase B (O-acetylserine sulfhydrolase B) K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D RCFBP_21431 serA; D-3-phosphoglycerate dehydrogenase / D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RCFBP_20578 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rsc00280]
D RCFBP_20907 ilvE; Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RCFBP_11803 putative pyruvate dehydrogenase e1 component (Alpha subunit) oxidoreductase protein K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RCFBP_11804 putative pyruvate decarboxylase e1 (Beta subunit) oxidoreductase protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RCFBP_11805 putative dihydrolipoamide acetyltransferase (Component e2 of pyruvate dehydrogenase complex) protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_21219 putative acyl CoA dehydrogenase oxidoreductase protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RCFBP_11365 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RCFBP_21214 putative acyl-CoA dehydrogenase oxidoreductase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_21009 fadA; 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_21228 Methylcrotonoyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RCFBP_21224 putative propionyl-coA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RCFBP_21226 putative enoyl-coA hydratase protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RCFBP_21232 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RCFBP_11566 atoD; 3-oxoacid CoA-transferase, alpha subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RCFBP_11567 atoA; 3-oxoacid CoA-transferase, beta subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rsc00290]
D RCFBP_20520 putative threonine dehydratase (tdcB) K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RCFBP_21034 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RCFBP_11395 leuC; 3-isopropylmalate isomerase, subunit with leuD K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RCFBP_11396 leuD; 3-isopropylmalate isomerase, subunit with LeuC K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RCFBP_11397 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RCFBP_11312 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RCFBP_20077 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RCFBP_11313 ilvH; Acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RCFBP_11314 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RCFBP_11014 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RCFBP_20907 ilvE; Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RCFBP_20100 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RCFBP_11317 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rsc00300]
D RCFBP_20099 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RCFBP_20262 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RCFBP_11399 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RCFBP_10753 dapA; dihydrodipicolinate synthase (DHDPS) K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RCFBP_10897 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RCFBP_20751 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RCFBP_20289 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RCFBP_10705 dapB; dihydrodipicolinate reductase(DHPR) K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RCFBP_20041 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RCFBP_10991 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RCFBP_20040 putative aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RCFBP_20044 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RCFBP_21316 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RCFBP_10471 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RCFBP_20493 transcriptional regulators containing a dna-binding hth domain and an aminotransferase domain transcription regulator protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RCFBP_21259 transcriptional regulators containing a dna-binding hth domain and an aminotransferase domain transcription regulator protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RCFBP_10611 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RCFBP_10612 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rsc00310]
D RCFBP_21293 putative NAD(+)-dependent aldehyde dehydrogenase; exported protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20659 dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21417 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_20706 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_20625 putative Formyl-CoA transferase, CaiB/BaiF family K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D RCFBP_21361 aminotransferase class-III K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D RCFBP_10114 Ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rsc00220]
D RCFBP_10844 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RCFBP_10845 argG; Argininosuccinate synthase (Citrulline--aspartate ligase) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RCFBP_11067 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RCFBP_21298 rocF; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RCFBP_11356 ureC; Urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RCFBP_11355 ureB; Urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RCFBP_11353 ureA; Urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RCFBP_21004 gdhA; glutamate dehydrogenase, NADP-specific, oxidoreductase protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RCFBP_20100 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RCFBP_20179 argA; Amino-acid acetyltransferase (N-acetylglutamate synthase) K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RCFBP_10627 argJ; Arginine biosynthesis bifunctional protein argJ [Includes: Glutamate N-acetyltransferase (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (N-acetylglutamate synthase) (AGS)] K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RCFBP_21412 argB; acetylglutamate kinase (precursor) K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RCFBP_21311 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RCFBP_10991 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RCFBP_10594 argE; N-acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D RCFBP_11650 argE; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rsc00330]
D RCFBP_11601 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RCFBP_11056 adi; Lysine decarboxylase (LDC) K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_10754 betB; betaine aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D RCFBP_21298 rocF; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RCFBP_21297 rocD; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RCFBP_10763 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RCFBP_10167 putA; multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RCFBP_10641 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RCFBP_10709 proA; Glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RCFBP_10646 putative Prolyl 4-hydroxylase alpha subunit K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D RCFBP_10114 Ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:rsc00340]
D RCFBP_10498 hisG; ATP phosphoribosyltransferase (ATP-PRTase) (ATP-PRT) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RCFBP_20208 hisZ; hetero-octameric ATP phosphoribosyl transferase, tRNA synthetase-like subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RCFBP_10507 hisE; Phosphoribosyl-ATP pyrophosphatase (PRA-PH) K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RCFBP_10506 hisI; Phosphoribosyl-AMP cyclohydrolase (PRA-CH) K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RCFBP_10504 hisA; 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino) methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RCFBP_10503 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RCFBP_10505 hisF; imidazole glycerol phosphate synthase, subunit with HisH K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RCFBP_10501 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RCFBP_10500 hisC; Histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20576 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_10499 hisD; Histidinol dehydrogenase (HDH) K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RCFBP_10801 hutH; Histidine ammonia-lyase (Histidase) K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RCFBP_10800 hutU; Urocanate hydratase (Urocanase) (Imidazolonepropionate hydrolase) K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RCFBP_10803 hutI; Imidazolonepropionase (Imidazolone-5-propionate hydrolase) K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RCFBP_10802 hutG; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_20518 conserved protein of unknown function K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:rsc00350]
D RCFBP_10500 hisC; Histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20576 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20470 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RCFBP_10334 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RCFBP_21103 putative maleylacetoacetate isomerase (maiA) K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D RCFBP_21190 Putative fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D RCFBP_11480 Putative polyphenol oxidase oxidoreductase protein K00505 TYR; tyrosinase [EC:1.14.18.1]
D RCFBP_21150 putative polyphenol oxidase, catechol oxidase K00505 TYR; tyrosinase [EC:1.14.18.1]
D RCFBP_20867 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RCFBP_10307 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11485 putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11007 putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D RCFBP_11598 hpaI; 2-dehydro-3-deoxyglucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D RCFBP_21417 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_20706 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_21104 putative isomerase/hydrolase; Fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rsc00360]
D RCFBP_10110 phhA; Phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RCFBP_10583 paaK; phenylacetyl-CoA ligase, phenylacetic acid degradation K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RCFBP_10584 paaI; phenylacetate pathway hotdog-fold thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D RCFBP_10585 paaG; acyl-CoA hydratase, phenylacetic acid degradation K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_11371 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RCFBP_21250 3-HYDROXYBUTYRYL-COA DEHYDROGENASE K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RCFBP_10500 hisC; Histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20576 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20470 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RCFBP_10334 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RCFBP_11133 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RCFBP_20555 dadA; D-amino acid dehydrogenase subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RCFBP_10283 putative tryptophan 2-monooxygenase oxidoreductase protein K21795 pao; phenylalanine 2-monooxygenase [EC:1.13.12.9]
D RCFBP_20643 katG; Peroxidase/catalase (Catalase-peroxidase) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RCFBP_20191 Rieske-type ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D RCFBP_20194 putative ferredoxin--NAD(+) reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:rsc00380]
D RCFBP_10281 putative tryptophan-2,3-dioxygenase oxidoreductase protein (tdo1) K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D RCFBP_20657 putative dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D RCFBP_20655 putative metal-dependent hydrolase cyclase (arylformamidase) K07130 kynB; arylformamidase [EC:3.5.1.9]
D RCFBP_20656 putative pyridoxal-5'-phosphate (PLP)-dependent kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20659 dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11842 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RCFBP_20643 katG; Peroxidase/catalase (Catalase-peroxidase) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rsc00400]
D RCFBP_10787 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine-repressible) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RCFBP_20673 aroG; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RCFBP_10481 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RCFBP_10676 aroQ; 3-dehydroquinate dehydratase (Type II DHQase 3) K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RCFBP_10684 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RCFBP_10480 aroK; Shikimate kinase (SK) K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RCFBP_20574 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RCFBP_11562 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RCFBP_10576 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RCFBP_10575 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RCFBP_10573 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RCFBP_11402 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RCFBP_10572 trpC; Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RCFBP_11405 trpA; tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RCFBP_11403 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RCFBP_20577 pheA; bifunctional chorismate mutase/prephenate dehydratase PheA K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RCFBP_20575 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RCFBP_10886 pheC; Cyclohexadienyl dehydratase precursor [Includes: Prephenate dehydratase; Arogenate dehydratase] K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D RCFBP_10500 hisC; Histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20576 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20470 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RCFBP_10110 phhA; Phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rsc00410]
D RCFBP_10719 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RCFBP_21416 puuE; 4-aminobutyrate aminotransferase, PLP-dependent K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11034 panC; Pantothenate synthetase (PS) (Pantoate--beta-alanine ligase) K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RCFBP_10747 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_21219 putative acyl CoA dehydrogenase oxidoreductase protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism
D RCFBP_10899 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RCFBP_10535 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 00440 Phosphonate and phosphinate metabolism
D RCFBP_20887 putative phosphonate ABC transporter, permease component (phnM) K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
C 00450 Selenocompound metabolism [PATH:rsc00450]
D RCFBP_11647 metC; cystathionine beta-lyase, PLP-dependent (beta-cystathionase) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RCFBP_11845 putative cystathionine beta-lyase, PLP-dependent (MetC) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RCFBP_21197 metHa; 5-methyltetrahydrofolate-homocysteine methyltransferase protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RCFBP_21198 metHb; 5-methyltetrahydrofolate-homocysteine methyltransferase protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RCFBP_11090 trxB; thioredoxin reductase, FAD/NAD(P)-binding K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RCFBP_20295 putative thioredoxin reductase oxidoreductase, general stress protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RCFBP_11005 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RCFBP_11004 cysD; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RCFBP_11040 metG; Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rsc00460]
D RCFBP_11842 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RCFBP_10899 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RCFBP_10535 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RCFBP_20120 ansB; Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RCFBP_20054 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RCFBP_20684 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rsc00470]
D RCFBP_20060 dadX; alanine racemase 2, PLP-binding K01775 alr; alanine racemase [EC:5.1.1.1]
D RCFBP_10618 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RCFBP_11428 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RCFBP_10614 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RCFBP_21316 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RCFBP_10471 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RCFBP_11133 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RCFBP_20555 dadA; D-amino acid dehydrogenase subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rsc00480]
D RCFBP_10899 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RCFBP_10535 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RCFBP_20637 putative cation transport regulatory protein (ChaC-like protein) K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D RCFBP_11226 putative lactam utilization protein, UPF0271 family, LamB/YcsF family K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RCFBP_11224 Allophanate hydrolase subunit1 (ahs1) K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D RCFBP_11225 allophanate hydrolase, subunit2 (ahs2) K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D RCFBP_10170 ATP-dependent carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RCFBP_21143 conserved protein of unknown function K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RCFBP_21142 gshB; glutathione synthetase (glutathione GSH synthase) K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RCFBP_11011 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RCFBP_11269 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RCFBP_10729 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_20598 gst; glutathione S-transferase protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_10378 gstL; Glutathione s-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_10158 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_20865 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_11372 Glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_21358 putative Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_11802 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_20494 Glutathione S transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_21433 gor; glutathione oxidoreductase (GR)(GRase) K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D RCFBP_10910 icd; Isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RCFBP_10774 putative glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RCFBP_21184 putative glutathione peroxydase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RCFBP_10622 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rsc00540]
D RCFBP_20017 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RCFBP_10623 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RCFBP_20019 lpxD; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RCFBP_20270 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RCFBP_20016 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RCFBP_10865 lpxK; tetraacyldisaccharide 4' kinase (lipid A 4'kinase) K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RCFBP_21075 kdsD; Arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RCFBP_20307 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RCFBP_21076 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RCFBP_10863 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RCFBP_20721 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RCFBP_21317 htrB; lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RCFBP_21318 putative lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RCFBP_11455 putative hydroxylase; similar to clavaminate synthase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D RCFBP_20567 rfaE; ADP-heptose synthase protein (fused heptose 7-phosphate kinase; heptose 1-phosphate adenyltransferase) K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RCFBP_20958 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RCFBP_21182 putative Cytidylyltransferase (aut gene) K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RCFBP_20566 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RCFBP_20722 rfaC; ADP-heptose; Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RCFBP_20909 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RCFBP_11191 putative lipopolysaccharide transmembrane protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rsc00541]
D RCFBP_11155 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RCFBP_20568 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RCFBP_20731 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RCFBP_20733 rfbB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RCFBP_20730 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RCFBP_20732 rfbD; TDP-rhamnose synthetase, NAD(P)-binding K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RCFBP_10992 putative Ferredoxin--NAD(+) reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RCFBP_21276 glmU; bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:rsc00550]
D RCFBP_10497 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RCFBP_10848 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RCFBP_10617 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RCFBP_10614 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RCFBP_10611 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RCFBP_10618 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RCFBP_10612 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RCFBP_20025 uppS; undecaprenyl pyrophosphate synthetase (di-trans, poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RCFBP_20713 uppP; undecaprenyl pyrophosphate phosphatase; bacitracin resistance K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RCFBP_10295 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RCFBP_10613 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RCFBP_10616 murG; Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RCFBP_10685 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RCFBP_10474 mrcA; fused penicillin-binding protein 1a: transglycosylase (N-terminal); transpeptidase (C-terminal) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RCFBP_21382 mrdA; Peptidoglycan glycosyltransferase (penicillin-binding protein 2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RCFBP_10610 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RCFBP_21160 dacC; D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RCFBP_20894 dacB; Serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rsc00552]
D RCFBP_20713 uppP; undecaprenyl pyrophosphate phosphatase; bacitracin resistance K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RCFBP_10295 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rsc00543]
D RCFBP_20271 cysE; Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rsc00730]
D RCFBP_21339 thiC; thiamin (pyrimidine moiety) biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RCFBP_21346 thiD; bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RCFBP_20461 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RCFBP_21340 thiO; D-AMINO ACID OXIDASE FLAVOPROTEIN OXIDOREDUCTASE; thiamine biosynthesis K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RCFBP_11173 dxs; 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein, thiamin-binding K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RCFBP_21342 thiG; thiamin biosynthesis ThiGH complex subunit K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RCFBP_21343 thiE; THIAMINE-PHOSPHATE PYROPHOSPHORYLASE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RCFBP_10692 thiL; Thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RCFBP_20528 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RCFBP_21348 putative alkaline phosphatase signal peptide protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_21349 secreted alkaline phosphatase lipoprotein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_10862 adk; Adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rsc00740]
D RCFBP_20700 ribAB; Riboflavin biosynthesis bifunctional protein: GTP cyclohydrase II AND 3,4-Dihydroxy-2-butone-4-phosphate synthase (DHBP synthase) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RCFBP_20698 ribD; bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RCFBP_20701 ribE; riboflavin synthase, beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RCFBP_20699 ribC; Riboflavin synthase (alpha chain) K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RCFBP_10968 ribF; Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)] K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RCFBP_11341 putative ADP-ribose diphosphatase, nudix domain K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RCFBP_10551 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rsc00750]
D RCFBP_20648 pdxH; pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RCFBP_20578 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RCFBP_20964 pdxA; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent (pyridoxine phosphate biosynthetic protein) K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RCFBP_20411 pdxJ; Pyridoxine 5'-phosphate synthase (PNP synthase) K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RCFBP_20098 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rsc00760]
D RCFBP_10979 nadB; quinolinate synthetase, B subunit, L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RCFBP_10977 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RCFBP_10978 nadC; Nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RCFBP_20449 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RCFBP_20229 surE; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RCFBP_11203 nadD; nicotinic acid mononucleotide adenylyltransferase, NAD(P)-requiring K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RCFBP_11085 putative nh3-dependent nad+ synthetase (nadE) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RCFBP_10690 conserved protein of unknown function, cinA family K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RCFBP_11769 pncA; nicotinamidase/pyrazinamidase (bifunctional protein) K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RCFBP_20203 npdA; NAD-dependent deacetylase; sirtuin family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RCFBP_10797 ppnK; Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RCFBP_10718 pntAb; NAD(P) transhydrogenase subunit alpha part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RCFBP_10720 pntAa; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RCFBP_10717 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RCFBP_21417 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RCFBP_20706 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rsc00770]
D RCFBP_11312 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RCFBP_20077 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RCFBP_11313 ilvH; Acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RCFBP_11314 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RCFBP_11014 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RCFBP_10817 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RCFBP_10102 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RCFBP_11034 panC; Pantothenate synthetase (PS) (Pantoate--beta-alanine ligase) K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RCFBP_21180 coaX; Type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RCFBP_10964 coaBC; Coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (Phosphopantothenoylcysteine synthase) (PPC synthetase) (PPCS) (CoaB)] K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RCFBP_21098 coaD; phosphopantetheine adenylyltransferase (CMP-deoxy-D-manno-octulosonate-lipid A transferase) K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RCFBP_10632 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RCFBP_20410 acpS; holo-[acyl-carrier-protein] synthase; Holo-ACP synthase 4'-phosphopantetheinyl transferase acpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RCFBP_20907 ilvE; Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RCFBP_10747 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RCFBP_10719 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rsc00780]
D RCFBP_21127 putative biotin synthesis methyltransferase, bioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RCFBP_21057 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-acp synthase) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RCFBP_20424 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase (KAS) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RCFBP_11210 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_11080 putative deshydrogenase oxydoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20426 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20940 fabG; 3-ketoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_21049 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20018 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RCFBP_20261 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RCFBP_11857 bioF; 7-keto-8-aminopelargonic acid synthetase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RCFBP_11858 bioA; Adenosylmethionine--8-amino-7-oxononanoate transaminase, PLP-dependent K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RCFBP_11856 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RCFBP_21227 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D RCFBP_21179 birA; bifunctional protein: biotin operon repressor and biotin-[acetyl-coA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rsc00785]
D RCFBP_21164 lipB; Lipoyltransferase (Lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferase, lipoate-protein ligase B) K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RCFBP_21165 lipA; Lipoyl synthase (Lipoic acid synthase or Lipoate synthase, Sulfur insertion protein lipA (Lip-syn, LS) K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_11606 pdhA; pyruvate dehydrogenase, decarboxylase subunit E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RCFBP_11607 pdhB; Dihydrolipoyllysine-residue succinyltransferase, component of pyruvate dehydrogenase complex (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RCFBP_20159 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RCFBP_11803 putative pyruvate dehydrogenase e1 component (Alpha subunit) oxidoreductase protein K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RCFBP_11804 putative pyruvate decarboxylase e1 (Beta subunit) oxidoreductase protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RCFBP_11805 putative dihydrolipoamide acetyltransferase (Component e2 of pyruvate dehydrogenase complex) protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RCFBP_10181 gcvP; glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RCFBP_10183 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RCFBP_10182 gcvH; glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactor K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rsc00790]
D RCFBP_11174 conserved protein of unknown function, DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D RCFBP_21348 putative alkaline phosphatase signal peptide protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_21349 secreted alkaline phosphatase lipoprotein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_21016 nudB; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D RCFBP_21299 putative Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RCFBP_10819 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinediphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RCFBP_11506 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RCFBP_20522 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RCFBP_11407 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RCFBP_20700 ribAB; Riboflavin biosynthesis bifunctional protein: GTP cyclohydrase II AND 3,4-Dihydroxy-2-butone-4-phosphate synthase (DHBP synthase) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RCFBP_10814 Putative Para-aminobenzoate synthase component 1 (Para-aminobenzoate synthase component I) (ADC synthase) (pabB) K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RCFBP_11898 Putative 6-pyruvoyl tetrahydrobiopterin synthase (ptpS) (PTP synthase) K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RCFBP_10109 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RCFBP_10110 phhA; Phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RCFBP_11899 conserved protein of unknown function (Organic radical activating enzymes) K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RCFBP_20675 queC; queuosine biosynthesis protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RCFBP_21035 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RCFBP_20441 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RCFBP_20914 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RCFBP_20094 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RCFBP_20525 mogA; molybdochetalase, Molybdenum cofactor (Moco) biosynthesis K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RCFBP_20443 moeA; Molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RCFBP_20096 moeA; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RCFBP_20442 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rsc00670]
D RCFBP_20522 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RCFBP_11603 folD; bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RCFBP_20684 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RCFBP_10972 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RCFBP_20977 purH; bifunctional: IMP cyclohydrolase (N-terminal); phosphoribosylaminoimidazolecarboxamide formyltransferase (C-terminal) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RCFBP_21372 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RCFBP_20106 pmrIa; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RCFBP_10183 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RCFBP_21197 metHa; 5-methyltetrahydrofolate-homocysteine methyltransferase protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RCFBP_21198 metHb; 5-methyltetrahydrofolate-homocysteine methyltransferase protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RCFBP_20521 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RCFBP_11459 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RCFBP_21352 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RCFBP_21355 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rsc00860]
D RCFBP_20254 gltX; glutamate tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RCFBP_10556 hemA; Glutamyl-tRNA reductase (GluTR) K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RCFBP_20750 hemL; Glutamate-1-semialdehyde 2,1-aminomutase (aminotransferase), PLP-dependent K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RCFBP_10461 hemB; 5-aminolevulinate dehydratase (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RCFBP_11074 hemC; hydroxymethylbilane synthase (porphobilinogen deaminase) K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RCFBP_10165 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RCFBP_11204 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RCFBP_10193 hemN; Coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RCFBP_10710 conserved membrane protein of unknown function, UPF0093 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RCFBP_10804 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RCFBP_11075 Probable bifunctional: uroporphyrin-III c-methyltransferase and uroporphyrinogen-III synthase transmembrane protein K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D RCFBP_11006 cysG; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RCFBP_21115 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RCFBP_21116 ctaA; cytochrome C oxidase assembly protein, AA3 subunit-controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RCFBP_11008 cbiX; Sirohydrochlorin cobaltochelatase, Cobalamin (Vitamin B12) biosynthesis anaerobic pathway K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RCFBP_10784 putative Cob(I)yrinic acid a,c-diamide adenosyltransferase (Mmab) K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RCFBP_11032 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RCFBP_11030 cobD; cobalamin biosynthesis protein cobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RCFBP_20530 cobD; adenosylcobinamide-phosphate synthase; cobalamin (Vitamin B12) biosynthesis protein, cobD/cbiB family K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RCFBP_11029 cobC; L-threonine-O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D RCFBP_11031 cobU; bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RCFBP_11026 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RCFBP_11025 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RCFBP_11027 putative phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RCFBP_21137 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rsc00130]
D RCFBP_10681 putative chorismate--pyruvate lyase (ubiC) K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D RCFBP_10761 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RCFBP_20705 ubiD; 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RCFBP_10551 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RCFBP_20583 ubiG; bifunctional: 3-demethylubiquinone-9 3-methyltransferase; 2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RCFBP_20973 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RCFBP_21026 ubiE; bifunctional: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; S-adenosylmethionine:2-DMK methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RCFBP_10606 ubiquinone biosynthesis and related protein, COQ7 homolog K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RCFBP_11187 putative flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RCFBP_11554 wrbA; Flavoprotein wrbA; tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RCFBP_20802 putative Flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RCFBP_10334 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rsc00900]
D RCFBP_11173 dxs; 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein, thiamin-binding K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RCFBP_20023 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RCFBP_11652 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RCFBP_21092 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RCFBP_11653 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RCFBP_20218 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RCFBP_10984 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_10551 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RCFBP_11172 ispA; geranyltranstransferase (=farnesyldiphosphate synthase) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RCFBP_10637 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RCFBP_20025 uppS; undecaprenyl pyrophosphate synthetase (di-trans, poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RCFBP_20527 metalloprotease; endopeptidase M48, Ste24p family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rsc00906]
D RCFBP_11661 crtB; phytoene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:rsc00903]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_21045 lipase/esterase protein (bah) K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:rsc00907]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_21232 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RCFBP_21009 fadA; 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RCFBP_10699 tktA; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rsc00523]
D RCFBP_20731 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RCFBP_20733 rfbB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RCFBP_20730 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RCFBP_20732 rfbD; TDP-rhamnose synthetase, NAD(P)-binding K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D RCFBP_20733 rfbB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RCFBP_10279 putative isopenicillin N epimerase protein (class v) K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 00332 Carbapenem biosynthesis [PATH:rsc00332]
D RCFBP_10641 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RCFBP_10709 proA; Glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rsc00261]
D RCFBP_11005 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RCFBP_11004 cysD; ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RCFBP_20262 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RCFBP_11399 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RCFBP_10753 dapA; dihydrodipicolinate synthase (DHDPS) K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RCFBP_10897 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RCFBP_20751 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RCFBP_20289 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RCFBP_10705 dapB; dihydrodipicolinate reductase(DHPR) K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rsc00521]
D RCFBP_20723 cpsG; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RCFBP_20273 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RCFBP_20180 iolG; Inositol 2-dehydrogenase involved in myo-inositol catabolism K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RCFBP_20196 putative oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RCFBP_20731 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RCFBP_20733 rfbB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RCFBP_20730 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RCFBP_20732 rfbD; TDP-rhamnose synthetase, NAD(P)-binding K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:rsc00525]
D RCFBP_20731 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RCFBP_20733 rfbB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rsc00401]
D RCFBP_20575 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RCFBP_10500 hisC; Histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20576 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20470 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:rsc00405]
D RCFBP_20884 putative Salicylate 1-monooxygenase (nahG) K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D RCFBP_10576 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RCFBP_10575 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RCFBP_20427 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RCFBP_11210 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_11080 putative deshydrogenase oxydoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20426 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20940 fabG; 3-ketoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_21049 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20261 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RCFBP_20425 acpP; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D RCFBP_21050 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rsc00999]
D RCFBP_21319 metK; methionine adenosyltransferase 1 K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RCFBP_10684 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rsc00362]
D RCFBP_11862 benA; Benzoate 1,2-dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RCFBP_11861 benB; Benzoate 1,2-dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RCFBP_11860 benC; Benzoate 1,2-dioxygenase electron transfer component [Includes: Ferredoxin--NAD(+) reductase] K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RCFBP_11859 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RCFBP_11863 catA; Catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RCFBP_11865 catB; Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RCFBP_11864 catC; Muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D RCFBP_11145 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RCFBP_21193 putative B-ketoadipate enol-lactone hydrolase protein (pcaD) K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RCFBP_11141 pcaI; 3-oxoadipate CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D RCFBP_11142 pcaJ; 3-oxoadipate CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D RCFBP_21009 fadA; 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RCFBP_11143 pcaF; Beta-ketoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D RCFBP_20608 putative TAUTOMERASE (4-OXALOCROTONATE TAUTOMERASE) K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RCFBP_11907 pcaG; Protocatechuate 3,4-dioxygenase, alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D RCFBP_11908 pcaH; Protocatechuate 3,4-dioxygenase, beta-chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D RCFBP_11144 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase (3-carboxymuconate lactonizing enzyme) (CMLE) K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D RCFBP_11146 pcaC; 4-carboxymuconolactone decarboxylase (CMD) K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RCFBP_11121 putative 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RCFBP_20794 Carboxymuconolactone decarboxylase precursor K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RCFBP_11150 pobA; P-hydroxybenzoate hydroxylase (4-hydroxybenzoate 3-monooxygenase) (PHBH) K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D RCFBP_11768 fadB; fused 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RCFBP_21010 putative 3-HYDROXYACYL-COA DEHYDROGENASE OXIDOREDUCTASE K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RCFBP_20659 dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_11371 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RCFBP_21250 3-HYDROXYBUTYRYL-COA DEHYDROGENASE K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rsc00627]
D RCFBP_11842 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RCFBP_10093 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RCFBP_21268 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RCFBP_10551 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RCFBP_20170 glnA; Glutamate--ammonia ligase (glutamine synthetase) K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3]
C 00364 Fluorobenzoate degradation [PATH:rsc00364]
D RCFBP_11862 benA; Benzoate 1,2-dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RCFBP_11861 benB; Benzoate 1,2-dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RCFBP_11860 benC; Benzoate 1,2-dioxygenase electron transfer component [Includes: Ferredoxin--NAD(+) reductase] K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RCFBP_11859 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RCFBP_11863 catA; Catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RCFBP_11164 putative Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RCFBP_11865 catB; Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rsc00625]
D RCFBP_10307 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11485 putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_20867 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RCFBP_11081 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_11892 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RCFBP_21237 dehH; Haloacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D RCFBP_20068 hadL; (S)-2-haloacid dehalogenase (2-haloalkanoic acid dehalogenase) (L-2-haloacid dehalogenase) (Halocarboxylic acid halidohydrolase) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rsc00361]
D RCFBP_11863 catA; Catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RCFBP_11164 putative Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RCFBP_11865 catB; Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RCFBP_20068 hadL; (S)-2-haloacid dehalogenase (2-haloalkanoic acid dehalogenase) (L-2-haloacid dehalogenase) (Halocarboxylic acid halidohydrolase) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RCFBP_21237 dehH; Haloacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:rsc00623]
D RCFBP_11863 catA; Catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RCFBP_11865 catB; Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RCFBP_11164 putative Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:rsc00622]
D RCFBP_11862 benA; Benzoate 1,2-dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RCFBP_11861 benB; Benzoate 1,2-dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RCFBP_11860 benC; Benzoate 1,2-dioxygenase electron transfer component [Includes: Ferredoxin--NAD(+) reductase] K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RCFBP_11859 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RCFBP_20608 putative TAUTOMERASE (4-OXALOCROTONATE TAUTOMERASE) K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:rsc00633]
D RCFBP_20231 Putative 12-oxophytodienoate reductase or N-ethylmaleimide reductase (nemA) K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D RCFBP_20591 OPR; 12-oxophytodienoate reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D RCFBP_21009 fadA; 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex beta subunit) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rsc00643]
D RCFBP_21103 putative maleylacetoacetate isomerase (maiA) K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D RCFBP_21190 Putative fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D RCFBP_11842 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RCFBP_21013 putative CoA TRANSFERASE; exported protein K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
D RCFBP_11356 ureC; Urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RCFBP_11355 ureB; Urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RCFBP_11353 ureA; Urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:rsc00930]
D RCFBP_21045 lipase/esterase protein (bah) K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D RCFBP_10586 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D RCFBP_20608 putative TAUTOMERASE (4-OXALOCROTONATE TAUTOMERASE) K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:rsc00626]
D RCFBP_10307 adhA; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_11485 putative alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RCFBP_20867 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D RCFBP_11907 pcaG; Protocatechuate 3,4-dioxygenase, alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D RCFBP_11908 pcaH; Protocatechuate 3,4-dioxygenase, beta-chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rsc03020]
D RCFBP_10415 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RCFBP_10416 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RCFBP_10457 rpoA; RNA polymerase, alpha subunit; RNA polymerase alpha chain family K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RCFBP_11260 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rsc03010]
D RCFBP_20572 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RCFBP_20029 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RCFBP_10436 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RCFBP_10456 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RCFBP_10448 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RCFBP_20119 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RCFBP_10426 rpsG; 30S ribosomal subunit protein S7, initiates assembly K02992 RP-S7; small subunit ribosomal protein S7
D RCFBP_10445 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RCFBP_20991 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RCFBP_10429 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RCFBP_10455 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RCFBP_10425 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RCFBP_10454 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RCFBP_10444 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RCFBP_11320 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RCFBP_20535 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RCFBP_10440 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RCFBP_20117 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RCFBP_10434 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RCFBP_10842 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RCFBP_21439 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RCFBP_10411 rplA; 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11 K02863 RP-L1; large subunit ribosomal protein L1
D RCFBP_10433 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RCFBP_10430 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RCFBP_10431 rplD; 50S ribosomal subunit protein L4, regulates expression of S10 operon K02926 RP-L4; large subunit ribosomal protein L4
D RCFBP_10443 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RCFBP_10446 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RCFBP_10413 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RCFBP_20116 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RCFBP_10412 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RCFBP_10410 rplK; 50S ribosomal subunit protein L11, N-terminal believed to regulate RelA K02867 RP-L11; large subunit ribosomal protein L11
D RCFBP_20992 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RCFBP_10441 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RCFBP_10450 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RCFBP_10438 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RCFBP_10458 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RCFBP_10447 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RCFBP_20532 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RCFBP_11575 rplT; 50S ribosomal subunit protein L20, also posttranslational autoregulator K02887 RP-L20; large subunit ribosomal protein L20
D RCFBP_10638 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RCFBP_10435 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RCFBP_10432 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RCFBP_10442 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RCFBP_21094 rplY; 5S rRNA binding 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RCFBP_10639 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RCFBP_10981 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RCFBP_10439 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RCFBP_10449 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RCFBP_20251 rpmE; 50S ribosomal protein L31, type B subfamily K02909 RP-L31; large subunit ribosomal protein L31
D RCFBP_20431 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RCFBP_10980 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RCFBP_21451 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RCFBP_11574 rpmI; 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D RCFBP_10453 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RCFBP_16s_rRNA_1 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_16s_rRNA_2 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_16s_rRNA_3 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_23s_rRNA_1 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RCFBP_23s_rRNA_2 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RCFBP_23s_rRNA_3 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RCFBP_5s_rRNA_1 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RCFBP_5s_rRNA_3 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RCFBP_5s_rRNA_2 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rsc00970]
D RCFBP_tRNA37 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA40 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA10 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA47 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RCFBP_tRNA53 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RCFBP_tRNA26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RCFBP_tRNA49 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RCFBP_tRNA23 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RCFBP_tRNA21 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RCFBP_tRNA42 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RCFBP_tRNA39 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RCFBP_tRNA35 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RCFBP_tRNA27 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RCFBP_tRNA30 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RCFBP_tRNA38 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RCFBP_tRNA41 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RCFBP_tRNA5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RCFBP_tRNA28 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RCFBP_tRNA33 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RCFBP_tRNA34 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RCFBP_tRNA43 tRNA-His K14226 tRNA-His; tRNA His
D RCFBP_tRNA2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RCFBP_tRNA44 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RCFBP_tRNA9 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RCFBP_tRNA13 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA51 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA24 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA22 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RCFBP_tRNA32 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RCFBP_tRNA12 tRNA-Met K14230 tRNA-Met; tRNA Met
D RCFBP_tRNA29 tRNA-Met K14230 tRNA-Met; tRNA Met
D RCFBP_tRNA46 tRNA-Met K14230 tRNA-Met; tRNA Met
D RCFBP_tRNA31 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RCFBP_tRNA52 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RCFBP_tRNA16 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RCFBP_tRNA18 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RCFBP_tRNA36 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RCFBP_tRNA11 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RCFBP_tRNA50 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RCFBP_tRNA14 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RCFBP_tRNA6 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RCFBP_tRNA48 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RCFBP_tRNA8 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RCFBP_tRNA7 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RCFBP_tRNA4 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RCFBP_tRNA15 tRNA-Val K14237 tRNA-Val; tRNA Val
D RCFBP_tRNA17 tRNA-Val K14237 tRNA-Val; tRNA Val
D RCFBP_tRNA20 tRNA-Val K14237 tRNA-Val; tRNA Val
D RCFBP_20254 gltX; glutamate tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RCFBP_21387 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RCFBP_20885 putative Glutamyl-tRNA amidotransferase/amidase (gatA) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RCFBP_21391 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RCFBP_21386 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C (Glu-ADT subunit C) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RCFBP_20629 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RCFBP_20624 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RCFBP_21018 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RCFBP_20955 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RCFBP_20957 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RCFBP_11572 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RCFBP_11110 serS; serine tRNA synthetase; also charges selenocystein tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RCFBP_20266 cysS; cysteine tRNA synthetase (Cysteine--tRNA ligase) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RCFBP_11151 conserved exported protein of unknown function K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D RCFBP_11040 metG; Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RCFBP_21372 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RCFBP_20106 pmrIa; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RCFBP_11156 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RCFBP_10706 leuS; Leucyl-tRNA synthetase (Leucine--tRNA ligase) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RCFBP_10967 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RCFBP_20452 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RCFBP_21206 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RCFBP_10644 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RCFBP_20217 hisS; Histidyl-tRNA synthetase (Histidine--tRNA ligase) K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RCFBP_11576 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RCFBP_11577 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RCFBP_20986 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RCFBP_20291 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rsc03060]
D RCFBP_10451 secY; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03076 secY; preprotein translocase subunit SecY
D RCFBP_10408 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D RCFBP_11325 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D RCFBP_10735 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D RCFBP_10734 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D RCFBP_10736 yajC; protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D RCFBP_21448 yidC; cytoplasmic insertase, essential for proper integration of ATPase into the membrane K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RCFBP_10626 secA; preprotein translocase, ATPase secretion component (General Secretory Pathway) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RCFBP_21131 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D RCFBP_10649 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RCFBP_misc_RNA_10 SRP_bact K01983 ffs; SRP RNA
D RCFBP_21102 ftsY; Signal recognition particle (SRP) GTPase K03110 ftsY; fused signal recognition particle receptor
D RCFBP_10509 tatA; Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D RCFBP_10510 tatB; Sec-independent protein translocase protein tatB homolog K03117 tatB; sec-independent protein translocase protein TatB
D RCFBP_10511 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D RCFBP_11674 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RCFBP_20416 lepB; leader peptidase (signal peptidase I), serine protease K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RCFBP_10966 lspA; prolipoprotein signal peptidase (SPase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rsc04122]
D RCFBP_20461 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RCFBP_11166 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RCFBP_20605 putative regulator, SirA-like domain K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RCFBP_10727 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RCFBP_20094 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RCFBP_20441 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RCFBP_20095 moaD; molybdenum cofactor biosynthesis protein D K03636 moaD; sulfur-carrier protein
D RCFBP_21136 moeB; Molybdopterin biosynthesis protein moeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RCFBP_20914 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RCFBP_20525 mogA; molybdochetalase, Molybdenum cofactor (Moco) biosynthesis K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RCFBP_21341 thiS; sulfur transfer protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rsc03018]
D RCFBP_10643 nudH; dinucleotide oligophosphate (alarmone) hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RCFBP_20440 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RCFBP_20305 eno; enolase, phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RCFBP_11321 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RCFBP_11183 rhlE; ATP-dependent RNA helicase, deaD-box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RCFBP_20937 rhlE; ATP-dependent RNA helicase hydrolase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RCFBP_20205 rnr; RNase R, 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RCFBP_10424 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RCFBP_20246 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RCFBP_10812 dnaK; Chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D RCFBP_20781 groL; chaperone Hsp60 (GroEL), part of GroE chaperone system K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RCFBP_20213 hfq; RNA chaperone Protein hfq, post-transcriptional regulator K03666 hfq; host factor-I protein
D RCFBP_11515 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RCFBP_10820 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rsc03030]
D RCFBP_11460 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RCFBP_11190 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RCFBP_20242 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RCFBP_11790 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RCFBP_10708 holA; DNA-directed DNA polymerase, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RCFBP_11012 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RCFBP_10002 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RCFBP_20115 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RCFBP_11178 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RCFBP_21065 ssb; ssDNA-binding protein, controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D RCFBP_11492 rnhA; Ribonuclease H (RNase H) K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RCFBP_20015 rnhB; Ribonuclease HII (RNase HII) K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RCFBP_11162 polA; DNA polymerase I (POL I) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RCFBP_20035 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rsc03410]
D RCFBP_20474 nth; endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on 5-formyluracil and 5-hydroxymethyluracil K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RCFBP_10570 ung; uracil-DNA-glycosylase (UDG) K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RCFBP_21087 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RCFBP_21089 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RCFBP_20265 putative DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RCFBP_10893 Putative regulatory protein ada (Regulatory protein of adaptative response) [Includes: Methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase)] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RCFBP_20062 ung; uracil-DNA glycosylase,phage-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RCFBP_11600 xthA; EXODEOXYRIBONUCLEASE III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RCFBP_21313 putative exodeoxyribonuclease III/endonuclease/phosphatase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RCFBP_11162 polA; DNA polymerase I (POL I) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RCFBP_20319 recJ; Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RCFBP_20035 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rsc03420]
D RCFBP_11651 mfd; transcription-repair ATP-dependent coupling factor, helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RCFBP_21067 uvrA; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC K03701 uvrA; excinuclease ABC subunit A
D RCFBP_20469 uvrB; ATP-dependent DNA excision repair enzyme, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
D RCFBP_20406 uvrC; UvrABC system protein C (Excinuclease ABC subunit C) K03703 uvrC; excinuclease ABC subunit C
D RCFBP_11157 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RCFBP_11162 polA; DNA polymerase I (POL I) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RCFBP_20035 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rsc03430]
D RCFBP_20282 mutS; methyl-directed DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D RCFBP_10835 mutL; methyl-directed mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D RCFBP_11157 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RCFBP_10312 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RCFBP_10868 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RCFBP_20319 recJ; Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RCFBP_21065 ssb; ssDNA-binding protein, controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D RCFBP_11190 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RCFBP_10002 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RCFBP_20242 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RCFBP_10708 holA; DNA-directed DNA polymerase, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RCFBP_11790 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RCFBP_11460 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RCFBP_11012 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RCFBP_20035 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rsc03440]
D RCFBP_20319 recJ; Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RCFBP_21065 ssb; ssDNA-binding protein, controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D RCFBP_20412 recO; DNA repair protein recO (Recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O)
D RCFBP_20239 recR; Recombination protein recR K06187 recR; recombination protein RecR
D RCFBP_20924 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D RCFBP_11162 polA; DNA polymerase I (POL I) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RCFBP_20980 ruvA; subunit A of RuvABC Holliday junction resolvasome, regulatory subunit K03550 ruvA; holliday junction DNA helicase RuvA
D RCFBP_20981 ruvB; ATP-dependent DNA helicase, subunit B of RuvABC Holliday junction resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RCFBP_20978 ruvC; endodeoxyribonuclease, subunit C of RuvABC Holliday junction resolvasome K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RCFBP_10739 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RCFBP_11190 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RCFBP_10002 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RCFBP_20242 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RCFBP_10708 holA; DNA-directed DNA polymerase, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RCFBP_11790 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RCFBP_11460 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RCFBP_11012 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RCFBP_10166 priA; Primosome factor n' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RCFBP_20118 putative rimosomal replication protein N (priB) K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:rsc03450]
D RCFBP_20892 ATP-dependent DNA helicase, Ku domain K10979 ku; DNA end-binding protein Ku
D RCFBP_20893 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rsc03250]
D RCFBP_20268 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rsc02010]
D RCFBP_20089 cysP; thiosulfate transport protein; ABC superfamily, periplasmic and binding component K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RCFBP_20084 cysT; thiosulfate transport protein; ABC superfamily, membrane component K02046 cysU; sulfate/thiosulfate transport system permease protein
D RCFBP_20083 cysW; thiosulfate transport protein; ABC superfamily, membrane component K02047 cysW; sulfate/thiosulfate transport system permease protein
D RCFBP_20082 cysA; thiosulfate transport protein; ABC transporter, ATP-binding component K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RCFBP_11296 putative ABC-type tungstate transport system K05772 tupA; tungstate transport system substrate-binding protein
D RCFBP_10816 putative molybdenum transport system permease protein modB K05773 tupB; tungstate transport system permease protein
D RCFBP_10815 ABC transporter related, ATP binding, putative Heme-transporting ATPase K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RCFBP_21106 nasF; Nitrate ABC transporter, periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RCFBP_21107 nasE; nitrate ABC transporter K15577 nrtB; nitrate/nitrite transport system permease protein
D RCFBP_21108 nasD; nitrate ABC transporter, ATP-binding component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RCFBP_10073 putative ABC transporter, periplasmic-binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D RCFBP_20235 putative ABC transporter, periplasmic-binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D RCFBP_20233 putative ABC-type transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D RCFBP_20234 putative ABC-type multidrug transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RCFBP_10514 putative iron(III)-binding periplasmic protein precursor (fbpA) K02012 afuA; iron(III) transport system substrate-binding protein
D RCFBP_10517 putative iron(III)-binding periplasmic protein precursor (fbpA) K02012 afuA; iron(III) transport system substrate-binding protein
D RCFBP_10513 putative Ferric transport system permease protein fbpB K02011 afuB; iron(III) transport system permease protein
D RCFBP_10512 putative atp-binding abc transporter protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RCFBP_10882 putative ABC-type glycine betaine transport system, Substrate-binding inner membrane component K05845 opuC; osmoprotectant transport system substrate-binding protein
D RCFBP_10492 putative ABC-type toluene transporter, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D RCFBP_10490 putative ABC-type transporter, periplasmic binding component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RCFBP_21176 putative ABC-type transporter, periplasmic component (resistance to organic solvents) K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RCFBP_10489 conserved membrane protein of unknown function, DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RCFBP_21178 putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RCFBP_10493 conserved protein of unknown function, STAS domain K07122 mlaB; phospholipid transport system transporter-binding protein
D RCFBP_10488 putative ABC transporter, atp-binding component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RCFBP_21177 putative ATP binding ABC transporter protein (resistance to organic solvents) K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RCFBP_11219 putative outer membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RCFBP_11221 putative ABC transport system (permease protein) K23535 nupB; general nucleoside transport system permease protein
D RCFBP_11220 putative ABC transport system (permease protein) K23536 nupC; general nucleoside transport system permease protein
D RCFBP_11222 rbsA; Monosaccharide-transporting ATPase (ABC superfamily) K23537 nupA; general nucleoside transport system ATP-binding protein
D RCFBP_20463 rbsB; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RCFBP_20465 rbsC; D-ribose transporter subunit; membrane component of ABC superfamily K10440 rbsC; ribose transport system permease protein
D RCFBP_20464 rbsA; fused D-ribose transporter subunits of ABC superfamily: ATP-binding components K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RCFBP_20188 putative rhizopine-binding protein precursor (mocB) K17213 K17213; inositol transport system substrate-binding protein
D RCFBP_20186 putative sugar transmembrane abc transporter protein (rbsC) K17214 K17214; inositol transport system permease protein
D RCFBP_20187 putative ribose/galactose/methyl galactoside import ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D RCFBP_10394 putative ABC-type sugar transporter, probable sugar binding precursor K17321 glpV; glycerol transport system substrate-binding protein
D RCFBP_10397 putative ABC transporter permease K17322 glpP; glycerol transport system permease protein
D RCFBP_10396 putative sugar ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D RCFBP_10399 ugpC; sn-glycerol-3-phosphate transport ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D RCFBP_10398 ugpC; sn-glycerol-3-phosphate transport ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D RCFBP_20164 ugpB; Glycerol-3-phosphate-binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RCFBP_20163 ugpA; sn-glycerol-3-phosphate transport system permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RCFBP_20162 ugpE; sn-glycerol-3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RCFBP_20161 ugpC; sn-glycerol-3-phosphate transport ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RCFBP_11508 pstS; Phosphate-binding protein pstS precursor (PBP), ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D RCFBP_10157 pstS; Phosphate-binding protein pstS precursor (PBP), ABC superfamily K02040 pstS; phosphate transport system substrate-binding protein
D RCFBP_11509 pstC; Phosphate transport system permease, ABC transporter K02037 pstC; phosphate transport system permease protein
D RCFBP_11510 pstA; Phosphate transport system permease, ABC transporter K02038 pstA; phosphate transport system permease protein
D RCFBP_11511 pstB; Phosphate import ATP-binding protein, ABC transporter K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RCFBP_21002 gltI; glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_21360 gltI; glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_11134 gltI; glutamate/aspartate ABC transporter,periplasmic binding subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_21000 gltK; glutamate/aspartate transport protein; ABC superfamily, membrane component K10002 gltK; glutamate/aspartate transport system permease protein
D RCFBP_21001 gltJ; glutamate/aspartate transport protein; ABC superfamily, membrane component K10003 gltJ; glutamate/aspartate transport system permease protein
D RCFBP_20999 gltL; glutamate/aspartate transport protein; ABC superfamily, atp_binding component K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RCFBP_10137 putative amino-acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10168 putative ABC-type branched-chain amino acid transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_11319 putative branched amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10123 putative branched-chain amino acid transport system permease, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_11759 putative ABC-type branched-chain amino acid transporter, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10985 putative leucine transporter subunit; periplasmic-binding component of ABC superfamily (livK) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10998 putative branched-chain amino acid ABC transporter, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10124 putative Branched-chain amino acid transport system permease, membrane component (livH) K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_11760 putative ABC-type branched-chain amino acid transporter, membrane component (livH) K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_10986 livH; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_10987 livM; leucine/isoleucine/valine transporter subunit; Inner-membrane translocator, membrane component of ABC superfamily K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_10125 putative Branched-chain amino acid transport system permease, membrane component (livM) K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_11761 putative ABC-type branched-chain amino acid transporter, membrane component K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_10121 putative branched-chain amino acid transport system permease, ATP binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_11762 putative ABC-type branched-chain amino acid transporter, atp_binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10988 livG; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10989 livF; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10122 putative leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily (livF) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_11763 putative ABC-type branched-chain amino acid transporter, ATP_binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10079 metQ; DL-methionine transporter subunit; periplasmic-binding component of ABC superfamily K02073 metQ; D-methionine transport system substrate-binding protein
D RCFBP_20559 metQ; D-and L-methionine ABC transporter, periplasmic component K02073 metQ; D-methionine transport system substrate-binding protein
D RCFBP_20560 metI; D-and L-methionine ABC transporter, membrane component K02072 metI; D-methionine transport system permease protein
D RCFBP_20561 metN; D-and L-methionine ABC transporter, atp_binding component K02071 metN; D-methionine transport system ATP-binding protein
D RCFBP_11347 putative Branched-chain amino acid ABC transporter, periplasmic amino acid-binding component (LivK family) K11959 urtA; urea transport system substrate-binding protein
D RCFBP_11348 putative high-affinity branched-chain amino acid transport system permease (livH or livM) K11960 urtB; urea transport system permease protein
D RCFBP_11349 putative high-affinity branched-chain amino acid transport system permease (livM or livH) K11961 urtC; urea transport system permease protein
D RCFBP_11350 livG; High-affinity branched-chain amino acid transport ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D RCFBP_11351 livF; High-affinity branched-chain amino acid transport ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D RCFBP_20052 putative dipeptide ABC transporter, periplasmic_binding component K13889 gsiB; glutathione transport system substrate-binding protein
D RCFBP_20051 dppB; dipeptide transporter; membrane component of ABC superfamily K13890 gsiC; glutathione transport system permease protein
D RCFBP_20050 dppC; D-ala-D-ala transporter subunit; membrane component of ABC superfamily K13891 gsiD; glutathione transport system permease protein
D RCFBP_20053 putative oligopeptide ABC transporter, fused atp_binding components K13892 gsiA; glutathione transport system ATP-binding protein
D RCFBP_20260 putative ABC-type transport system, periplasmic component K13893 yejA; microcin C transport system substrate-binding protein
D RCFBP_20259 putative inner membrane ABC transporter permease K13894 yejB; microcin C transport system permease protein
D RCFBP_20258 putative ABC-type transport system, permease component K13895 yejE; microcin C transport system permease protein
D RCFBP_20257 putative ABC-type transport system, ATP binding component K13896 yejF; microcin C transport system ATP-binding protein
D RCFBP_11411 putative ABC transporter transmembrane permease protein K09694 nodJ; lipooligosaccharide transport system permease protein
D RCFBP_11412 putative ABC transporter, ATP-binding component K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RCFBP_20317 lolE; outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily K09808 lolC_E; lipoprotein-releasing system permease protein
D RCFBP_20316 lolD; outer membrane lipoproteins ABC transporter, ATP_binding component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RCFBP_11010 putative permease, predicted YjgP/YjgQ family K07091 lptF; lipopolysaccharide export system permease protein
D RCFBP_11009 putative permease, predicted YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D RCFBP_21079 putative ABC transport protein, atp_binding component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RCFBP_11196 msbA; Lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RCFBP_21006 ABC transporter; putative xenobiotic-transporting ATPase K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RCFBP_21028 putative ABC TRANSPORTER, ATP-binding membrane component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rsc02060]
D RCFBP_21139 ptsI; PTS family enzyme I and Hpr components, PEP-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RCFBP_21141 PTS system fructose IIA component (phosphoenolpyruvate-dependent sugar phosphotransferase system) K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RCFBP_10598 fruB; phosphotransferase system, fructose-specific EI/HPr/EIIA components K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D RCFBP_10596 fruA; fused fructose-specific PTS enzymes: IIBcomponent; IIC components K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RCFBP_10597 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RCFBP_21082 ptsN; Phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), EIIA 2 component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rsc03070]
D RCFBP_20719 tolC; Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D RCFBP_10323 gspD; General Secretory Pathway protein D, type II secretion system K02453 gspD; general secretion pathway protein D
D RCFBP_10332 gspC; General Secretory Pathway protein C, type II secretion system K02452 gspC; general secretion pathway protein C
D RCFBP_10331 gspG; General Secretory Pathway protein G, type II secretion system K02456 gspG; general secretion pathway protein G
D RCFBP_10330 gspH; General Secretory Pathway protein H, type II secretion system K02457 gspH; general secretion pathway protein H
D RCFBP_10329 gspI; General Secretory Pathway protein I, type II secretion system K02458 gspI; general secretion pathway protein I
D RCFBP_10328 gspJ; General Secretory Pathway protein J, type II secretion system K02459 gspJ; general secretion pathway protein J
D RCFBP_10327 gspK; General Secretory Pathway protein K, type II secretion system K02460 gspK; general secretion pathway protein K
D RCFBP_10326 gspL; General Secretory Pathway protein L, type II secretion system K02461 gspL; general secretion pathway protein L
D RCFBP_10325 gspM; General Secretory Pathway protein M, type II secretion system K02462 gspM; general secretion pathway protein M
D RCFBP_10322 gspE; General Secretory Pathway protein E, type II secretion system K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RCFBP_10735 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D RCFBP_10734 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D RCFBP_10408 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D RCFBP_11325 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D RCFBP_10451 secY; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03076 secY; preprotein translocase subunit SecY
D RCFBP_10736 yajC; protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D RCFBP_21448 yidC; cytoplasmic insertase, essential for proper integration of ATPase into the membrane K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RCFBP_10626 secA; preprotein translocase, ATPase secretion component (General Secretory Pathway) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RCFBP_21102 ftsY; Signal recognition particle (SRP) GTPase K03110 ftsY; fused signal recognition particle receptor
D RCFBP_21131 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D RCFBP_10649 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RCFBP_10509 tatA; Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D RCFBP_10510 tatB; Sec-independent protein translocase protein tatB homolog K03117 tatB; sec-independent protein translocase protein TatB
D RCFBP_10511 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D RCFBP_10175 conserved protein of unknown function, Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rsc02020]
D RCFBP_11514 phoR; sensor histidine kinase in two-component regulatory system with phoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RCFBP_11513 phoB; DNA-binding response regulator in two-component regulatory system with phoR K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RCFBP_21428 phoB; DNA-binding response regulator in two-component regulatory system with PhoR K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RCFBP_20402 putative two-component system response, response regulator receiver, transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RCFBP_21348 putative alkaline phosphatase signal peptide protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_21349 secreted alkaline phosphatase lipoprotein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_11508 pstS; Phosphate-binding protein pstS precursor (PBP), ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D RCFBP_10157 pstS; Phosphate-binding protein pstS precursor (PBP), ABC superfamily K02040 pstS; phosphate transport system substrate-binding protein
D RCFBP_11656 envZ; sensory histidine kinase in two-component regulatory system with OmpR, regulates ompF and ompC expression, senses osmolarity (OmpR family) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RCFBP_11657 ompR; response regulator in two-component regulatory system with EnvZ, regulates ompF and ompC expression (OmpR family) K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RCFBP_20419 degQ; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RCFBP_10080 kdpD; sensor histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RCFBP_10352 kdpE; response regulator (OmpR family) in two-component regulatory system with KdpD, regulation of potassium translocation K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RCFBP_10083 kdpA; P-type ATPase, high-affinity potassium transport system, A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RCFBP_10082 kdpB; P-type ATPase, high-affinity potassium transport system, B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RCFBP_10081 kdpC; P-type ATPase, high-affinity potassium transport system, C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RCFBP_10071 putative sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_10106 putative sensor hybrid histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_11747 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_10515 Sensor protein, histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_11748 putative response regulator, CheY family K07774 tctD; two-component system, OmpR family, response regulator TctD
D RCFBP_10516 putative response regulator, CheY family K07774 tctD; two-component system, OmpR family, response regulator TctD
D RCFBP_20925 putative response regulator, CheY family K07774 tctD; two-component system, OmpR family, response regulator TctD
D RCFBP_10072 putative response regulator, CheY family K07774 tctD; two-component system, OmpR family, response regulator TctD
D RCFBP_20628 conserved membrane protein of unknown function K07793 tctA; putative tricarboxylic transport membrane protein
D RCFBP_20627 conserved hypothetical protein; putative TRANSMEMBRANE PROTEIN K07794 tctB; putative tricarboxylic transport membrane protein
D RCFBP_21116 ctaA; cytochrome C oxidase assembly protein, AA3 subunit-controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RCFBP_10001 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D RCFBP_11386 putative citrate lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RCFBP_10077 putative response regulator receiver K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D RCFBP_10370 putative two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D RCFBP_20755 putative pilin transmembrane protein K02651 flp; pilus assembly protein Flp/PilA
D RCFBP_20756 putative pilin transmembrane protein K02651 flp; pilus assembly protein Flp/PilA
D RCFBP_20758 Putative pilus assembly (cpaB), transmembrane protein K02279 cpaB; pilus assembly protein CpaB
D RCFBP_20759 cpaC; pilus assembly secretion protein K02280 cpaC; pilus assembly protein CpaC
D RCFBP_20761 tadZ; Flp pilus assembly protein, ATPase K02282 cpaE; pilus assembly protein CpaE
D RCFBP_20762 tadA; Tad secretion sytem protein, secretion ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RCFBP_20763 tadB; Tad secretion system, pilus assembly protein K12510 tadB; tight adherence protein B
D RCFBP_20764 tadC; Tad secretion system, secretion accessory protein K12511 tadC; tight adherence protein C
D RCFBP_20031 glnD; [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RCFBP_11087 glnB; Nitrogen regulatory protein P-II for glutamine synthetase K04751 glnB; nitrogen regulatory protein P-II 1
D RCFBP_20168 ntrB; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RCFBP_20167 ntrC; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RCFBP_21367 putative SENSOR HISTIDINE KINASE K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RCFBP_21366 putative response regulator (containing CheY-like receiver) K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21156 dctB; sensor histidine kinase, transcriptional regulator of C4-dicarboxylate transport K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RCFBP_21155 dctD; transcriptional response regulator, C4-dicarboxylate transport response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D RCFBP_10204 dctA; citrate and C4-dicarboxylic acids transport protein, Sodium:dicarboxylate symporter (SDF) family K11103 dctA; aerobic C4-dicarboxylate transport protein
D RCFBP_21157 dctA; citrate and C4-dicarboxylic acids transport protein (DAACS family) K11103 dctA; aerobic C4-dicarboxylate transport protein
D RCFBP_10652 pehS; sensor histidine kinase transcription regulator K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RCFBP_10653 pehR; response regulator receiver, FIS type, sigma 54 interacting region K02667 pilR; two-component system, NtrC family, response regulator PilR
D RCFBP_21080 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D RCFBP_20916 pilA; Type 4 fimbrial pilin signal peptide protein K02650 pilA; type IV pilus assembly protein PilA
D RCFBP_10299 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_10661 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_10160 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20866 putative methyl-accepting chemotaxis protein transmembrane receptor K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20277 methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20278 methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11434 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11438 Methyl-accepting chemotaxis sensory transducer precursor K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11887 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D RCFBP_20744 pilJ; Type IV pilus transmembrane protein PilJ, twitching motility, Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D RCFBP_20745 pilI; Type IV pilus signal transduction protein PilI, twitching motility K02659 pilI; twitching motility protein PilI
D RCFBP_20743 putative composite protein : Response regulator receiver of two component system system (sensor histidine kinase and response regulator)/transcription regulator, similiraty with pilL protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RCFBP_20747 pilG; Type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RCFBP_20746 pilH; Type IV pilus response regulator PilH, twitching motility K02658 pilH; twitching motility two-component system response regulator PilH
D RCFBP_10532 Sensor protein, Histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RCFBP_20999 gltL; glutamate/aspartate transport protein; ABC superfamily, atp_binding component K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RCFBP_21000 gltK; glutamate/aspartate transport protein; ABC superfamily, membrane component K10002 gltK; glutamate/aspartate transport system permease protein
D RCFBP_21001 gltJ; glutamate/aspartate transport protein; ABC superfamily, membrane component K10003 gltJ; glutamate/aspartate transport system permease protein
D RCFBP_21002 gltI; glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_21360 gltI; glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_11134 gltI; glutamate/aspartate ABC transporter,periplasmic binding subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_21406 putative sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RCFBP_21405 putative response regulator/transcriptional regulator, RegA/PrrA/ActR family (CheY-like receiver domain + Fis-type HTH domain) K15012 regA; two-component system, response regulator RegA
D RCFBP_10522 petA; Cytochrome bC1 complex (ubiquinol:ferricytochrome c oxidoreductase), Rieske iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RCFBP_10523 petB; cytochrome bC1 complex (ubiquinol:ferricytochrome c oxidoreductase), transmembrane subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RCFBP_10524 petC; Cytochrome bC1 complex (ubiquinol:ferricytochrome c oxidoreductase), transmembrane subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RCFBP_10220 SoxD; sulfite oxidation cytochrome c-551 K08738 CYC; cytochrome c
D RCFBP_20151 ccoN; Cytochrome C oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RCFBP_20150 ccoO; Cytochrome C oxidase cbb3-type, mono-heme subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RCFBP_20149 ccoQ; Cytochrome C oxidase cbb3-type, membrane subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RCFBP_20148 ccoP; Cytochrome C oxidase cbb3-type, di-heme subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RCFBP_20719 tolC; Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D RCFBP_10715 phcB; regulatory protein, SAM-dependent methyltransferase domain K19620 phcB; extracellular factor (EF) 3-hydroxypalmitic acid methyl ester biosynthesis protein
D RCFBP_10714 phcS; Sensor protein histidine kinase, repressor of PhcA K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
D RCFBP_10713 phcR; Sensor protein; repressor of PhcA K19622 phcR; two-component system, response regulator PhcR
D RCFBP_10702 phcA; transcriptional regulator, LysR family K19624 phcA; LysR family transcriptional regulator, virulence genes transcriptional regulator
D RCFBP_10201 egl; Endoglucanase precursor (Endo-1,4-beta-glucanase) (Cellulase) K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RCFBP_10191 solI; Acyl-homoserine-lactone synthase, autoinducer synthesis protein solI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D RCFBP_10190 solR; Transcriptional activator protein solR K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D RCFBP_10537 putative iron transport-sensory transduction protein (fecR) K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rsc04148]
D RCFBP_21298 rocF; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RCFBP_10522 petA; Cytochrome bC1 complex (ubiquinol:ferricytochrome c oxidoreductase), Rieske iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rsc02024]
D RCFBP_10532 Sensor protein, Histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RCFBP_20213 hfq; RNA chaperone Protein hfq, post-transcriptional regulator K03666 hfq; host factor-I protein
D RCFBP_10576 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RCFBP_10575 trpG; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RCFBP_10191 solI; Acyl-homoserine-lactone synthase, autoinducer synthesis protein solI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D RCFBP_20728 putative dtdp-rhamnosyl transferase rfbf protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D RCFBP_10787 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine-repressible) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RCFBP_20673 aroG; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RCFBP_10352 kdpE; response regulator (OmpR family) in two-component regulatory system with KdpD, regulation of potassium translocation K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RCFBP_11745 Putative Spermidine/putrescine ABC transpoter (substrate binding protein) (potD) K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RCFBP_11796 putative ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RCFBP_11743 putative spermidine/putrescine transport system permease (potC) K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RCFBP_11797 putative ABC transporter, membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RCFBP_11798 putative ABC transporter, membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RCFBP_11744 putative polyamine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RCFBP_11746 potA; Spermidine/putrescine ABC transporter ATP-binding subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RCFBP_11799 putative ABC transporter, ATP-binding component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RCFBP_10137 putative amino-acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10168 putative ABC-type branched-chain amino acid transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_11319 putative branched amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10123 putative branched-chain amino acid transport system permease, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_11759 putative ABC-type branched-chain amino acid transporter, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10985 putative leucine transporter subunit; periplasmic-binding component of ABC superfamily (livK) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10998 putative branched-chain amino acid ABC transporter, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10124 putative Branched-chain amino acid transport system permease, membrane component (livH) K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_11760 putative ABC-type branched-chain amino acid transporter, membrane component (livH) K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_10986 livH; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_10987 livM; leucine/isoleucine/valine transporter subunit; Inner-membrane translocator, membrane component of ABC superfamily K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_10125 putative Branched-chain amino acid transport system permease, membrane component (livM) K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_11761 putative ABC-type branched-chain amino acid transporter, membrane component K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_10121 putative branched-chain amino acid transport system permease, ATP binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_11762 putative ABC-type branched-chain amino acid transporter, atp_binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10988 livG; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10989 livF; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10122 putative leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily (livF) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_11763 putative ABC-type branched-chain amino acid transporter, ATP_binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10190 solR; Transcriptional activator protein solR K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D RCFBP_10188 aidA; AidA K20275 aidA; nematocidal protein AidA
D RCFBP_10189 conserved protein of unknown function K20275 aidA; nematocidal protein AidA
D RCFBP_10187 putative sugar-binding lectin protein K20277 bcl; mannose-binding lectin
D RCFBP_10602 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_21380 putative long-chain-fatty-acid--coa ligase protein (fadD2) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_20698 ribD; bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RCFBP_21438 putative outer membrane protein (Probable drug efflux lipoprotein) K18139 oprM; outer membrane protein, multidrug efflux system
D RCFBP_10589 putative periplasmic dipeptide transport protein precursor (dppA-like or gsiB-like) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RCFBP_11378 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RCFBP_11446 dppA; dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RCFBP_21401 dppA; periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RCFBP_11450 dppB; dipeptide transport protein 1 (ABC superfamily, membrane component) K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RCFBP_10590 dppB; dipeptide transport protein 1 (ABC superfamily, membrane component) K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RCFBP_11449 dppC; Dipeptide transport system permease protein (ABC superfamily, membrane) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RCFBP_10591 dppC; Dipeptide transport system permease protein (ABC superfamily, membrane) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RCFBP_11448 dppD; Dipeptide transport ATP-binding (ABC superfamily) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RCFBP_10592 dppD; Dipeptide transport ATP-binding (ABC superfamily) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RCFBP_10593 dppF; Dipeptide transport ATP-binding (ABC superfamily) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RCFBP_11447 dppF; Dipeptide transport ATP-binding (ABC superfamily) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RCFBP_21448 yidC; cytoplasmic insertase, essential for proper integration of ATPase into the membrane K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RCFBP_10794 putative extracellular protease precursor, subtilisin-like protein K14645 K14645; serine protease [EC:3.4.21.-]
D RCFBP_10793 putative extracellular subtilisin-like protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D RCFBP_10408 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D RCFBP_11325 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D RCFBP_10451 secY; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03076 secY; preprotein translocase subunit SecY
D RCFBP_10736 yajC; protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D RCFBP_10626 secA; preprotein translocase, ATPase secretion component (General Secretory Pathway) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RCFBP_21102 ftsY; Signal recognition particle (SRP) GTPase K03110 ftsY; fused signal recognition particle receptor
D RCFBP_21131 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D RCFBP_10649 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rsc02030]
D RCFBP_10299 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_10661 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_10160 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20866 putative methyl-accepting chemotaxis protein transmembrane receptor K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20277 methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20278 methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11434 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11438 Methyl-accepting chemotaxis sensory transducer precursor K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11887 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D RCFBP_20463 rbsB; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:rsc02040]
D RCFBP_10559 putative type III effector protein K02423 fliT; flagellar protein FliT
D RCFBP_11179 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
D RCFBP_21080 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RCFBP_20305 eno; enolase, phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rsc04980]
D RCFBP_10784 putative Cob(I)yrinic acid a,c-diamide adenosyltransferase (Mmab) K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RCFBP_21197 metHa; 5-methyltetrahydrofolate-homocysteine methyltransferase protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RCFBP_21198 metHb; 5-methyltetrahydrofolate-homocysteine methyltransferase protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rsc01501]
D RCFBP_21302 ampG; muropeptide transport protein (MFS family) K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RCFBP_20647 putative Beta-hexosaminidase A precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RCFBP_20409 nagZ; Beta-hexosaminidase; N-acetyl-beta-glucosaminidase; Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RCFBP_21436 acrA; component of acridine efflux pump, multidrug efflux system K03585 acrA; membrane fusion protein, multidrug efflux system
D RCFBP_21437 acrB; component of acridine efflux pump, multidrug efflux system K18138 acrB; multidrug efflux pump
D RCFBP_21438 putative outer membrane protein (Probable drug efflux lipoprotein) K18139 oprM; outer membrane protein, multidrug efflux system
D RCFBP_20719 tolC; Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D RCFBP_10474 mrcA; fused penicillin-binding protein 1a: transglycosylase (N-terminal); transpeptidase (C-terminal) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RCFBP_21382 mrdA; Peptidoglycan glycosyltransferase (penicillin-binding protein 2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RCFBP_10610 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rsc01502]
D RCFBP_10618 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RCFBP_20060 dadX; alanine racemase 2, PLP-binding K01775 alr; alanine racemase [EC:5.1.1.1]
D RCFBP_10612 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RCFBP_10613 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RCFBP_10616 murG; Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rsc01503]
D RCFBP_20105 arnC; Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ((Ara4FN transferase) (EC 2.7.8.n1) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D RCFBP_20108 polysaccharide deacetylase; protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D RCFBP_10858 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RCFBP_20419 degQ; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RCFBP_21208 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RCFBP_20268 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RCFBP_21436 acrA; component of acridine efflux pump, multidrug efflux system K03585 acrA; membrane fusion protein, multidrug efflux system
D RCFBP_21437 acrB; component of acridine efflux pump, multidrug efflux system K18138 acrB; multidrug efflux pump
D RCFBP_20719 tolC; Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D RCFBP_20017 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rsc01000]
C 01001 Protein kinases [BR:rsc01001]
D RCFBP_11901 hipA; transcriptional repressor which interacts with HipB K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RCFBP_11514 phoR; sensor histidine kinase in two-component regulatory system with phoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RCFBP_11656 envZ; sensory histidine kinase in two-component regulatory system with OmpR, regulates ompF and ompC expression, senses osmolarity (OmpR family) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RCFBP_10080 kdpD; sensor histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RCFBP_10071 putative sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_10106 putative sensor hybrid histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_11747 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_10515 Sensor protein, histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_10384 Histidine kinase, sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RCFBP_10061 qseC; sensory histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RCFBP_21424 putative sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D RCFBP_20168 ntrB; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RCFBP_21367 putative SENSOR HISTIDINE KINASE K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RCFBP_10652 pehS; sensor histidine kinase transcription regulator K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RCFBP_21156 dctB; sensor histidine kinase, transcriptional regulator of C4-dicarboxylate transport K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RCFBP_20743 putative composite protein : Response regulator receiver of two component system system (sensor histidine kinase and response regulator)/transcription regulator, similiraty with pilL protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RCFBP_10532 Sensor protein, Histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RCFBP_21406 putative sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RCFBP_10714 phcS; Sensor protein histidine kinase, repressor of PhcA K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rsc01009]
D RCFBP_21350 ahcY; Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RCFBP_20488 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RCFBP_11256 putative protein phosphatase (prpC) K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RCFBP_11649 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rsc01002]
D RCFBP_10966 lspA; prolipoprotein signal peptidase (SPase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RCFBP_10633 pilD; type 4 prepilin-like proteins leader peptide processing enzyme (Protein secretion protein XCPA) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase] K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RCFBP_20757 putative prepilin peptidase transmembrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RCFBP_11230 pcp; Pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RCFBP_20002 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RCFBP_20275 putative glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RCFBP_11410 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RCFBP_10485 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RCFBP_21275 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RCFBP_21072 putative peptidase C56 K05520 yhbO; deglycase [EC:3.5.1.124]
D RCFBP_10062 conserved membrane protein of unknown function K07052 K07052; CAAX protease family protein
D RCFBP_11269 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RCFBP_11602 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D RCFBP_21101 putative zinc protease, peptidase M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D RCFBP_21100 putative ZINC PROTEASE, peptidase M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D RCFBP_11011 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RCFBP_10348 cgp; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D RCFBP_20044 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RCFBP_20030 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RCFBP_20972 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RCFBP_11505 ftsH; Cell division protein, ATP-dependent zinc-metallo protease; AAA ATPase and peptidase M41 families K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RCFBP_20527 metalloprotease; endopeptidase M48, Ste24p family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RCFBP_21370 putative htpX, metaloendopeptidase M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RCFBP_20913 putative zinc metallopeptidase, precursor K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D RCFBP_20022 putative membrane-associated zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RCFBP_20048 dppA1a; D-amino peptidase, DppA family K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D RCFBP_20249 conserved protein of unknown function K09933 mtfA; MtfA peptidase
D RCFBP_20049 dmpA; D-amino peptidase, DmpA family K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D RCFBP_20419 degQ; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RCFBP_10519 putative serine protease do-like precursor (degP) K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RCFBP_10794 putative extracellular protease precursor, subtilisin-like protein K14645 K14645; serine protease [EC:3.4.21.-]
D RCFBP_10793 putative extracellular subtilisin-like protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D RCFBP_21160 dacC; D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RCFBP_11616 pbgP; D-Alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RCFBP_20894 dacB; Serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RCFBP_20352 phage-related Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RCFBP_11668 clpP; proteolytic subunit of clpA-clpP ATP-dependent serine protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RCFBP_11670 lon; DNA-binding ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RCFBP_20122 lexA; transcriptional lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RCFBP_11674 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RCFBP_20416 lepB; leader peptidase (signal peptidase I), serine protease K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RCFBP_21135 putative Carboxy-terminal-processing protease; autocatalytic processed precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RCFBP_20436 Peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D RCFBP_11896 ldcA; Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RCFBP_21402 hslV; peptidase component of the HslUV protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RCFBP_20054 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RCFBP_10899 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RCFBP_10535 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RCFBP_20523 pmbA; peptidase, for maturation of Microcin B17 and degradation of CcdA K03592 pmbA; PmbA protein
D RCFBP_10788 tldD; peptidase K03568 tldD; TldD protein
D RCFBP_10419 conserved exported protein of unknown function K06894 yfhM; alpha-2-macroglobulin
D RCFBP_20210 hflC; Protein hflC, cofactor of ATP-dependent protease FtsH K04087 hflC; modulator of FtsH protease HflC
D RCFBP_20211 hflK; Protein hflK, cofactor of ATP-dependent protease FtsH K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rsc01003]
D RCFBP_11305 putative glycosyl transferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D RCFBP_10685 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RCFBP_10474 mrcA; fused penicillin-binding protein 1a: transglycosylase (N-terminal); transpeptidase (C-terminal) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RCFBP_11128 putative glycosyl-transfrase protein (ragF) K21011 pelF; polysaccharide biosynthesis protein PelF
D RCFBP_10547 opgH; Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rsc01005]
D RCFBP_20017 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RCFBP_20016 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RCFBP_10623 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RCFBP_20019 lpxD; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RCFBP_20270 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RCFBP_10865 lpxK; tetraacyldisaccharide 4' kinase (lipid A 4'kinase) K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RCFBP_21317 htrB; lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RCFBP_21318 putative lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RCFBP_11455 putative hydroxylase; similar to clavaminate synthase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D RCFBP_20721 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RCFBP_20307 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RCFBP_10863 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RCFBP_21076 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RCFBP_21075 kdsD; Arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RCFBP_20567 rfaE; ADP-heptose synthase protein (fused heptose 7-phosphate kinase; heptose 1-phosphate adenyltransferase) K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RCFBP_21182 putative Cytidylyltransferase (aut gene) K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RCFBP_20722 rfaC; ADP-heptose; Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RCFBP_20909 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RCFBP_11191 putative lipopolysaccharide transmembrane protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D RCFBP_20958 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RCFBP_20566 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RCFBP_20728 putative dtdp-rhamnosyl transferase rfbf protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D RCFBP_20768 gtrB; bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rsc01011]
D RCFBP_10497 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RCFBP_10848 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RCFBP_10617 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RCFBP_10614 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RCFBP_10611 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RCFBP_10618 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RCFBP_20060 dadX; alanine racemase 2, PLP-binding K01775 alr; alanine racemase [EC:5.1.1.1]
D RCFBP_11428 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RCFBP_11896 ldcA; Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RCFBP_10613 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RCFBP_10616 murG; Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RCFBP_20713 uppP; undecaprenyl pyrophosphate phosphatase; bacitracin resistance K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RCFBP_10295 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RCFBP_10841 mviN; Virulence factor MVIN-like, inner membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D RCFBP_10474 mrcA; fused penicillin-binding protein 1a: transglycosylase (N-terminal); transpeptidase (C-terminal) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RCFBP_21382 mrdA; Peptidoglycan glycosyltransferase (penicillin-binding protein 2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RCFBP_10610 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RCFBP_21160 dacC; D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RCFBP_20894 dacB; Serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RCFBP_11616 pbgP; D-Alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RCFBP_10685 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RCFBP_21356 putative soluble lytic murein transglycosylase precursor transmembrane protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RCFBP_10582 mltA; Membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RCFBP_20563 mltB; membrane-bound lytic murein transglycosylase B, precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RCFBP_11495 mltD; Membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D RCFBP_11788 putative Aminodeoxychorismate lyase; exported protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RCFBP_10213 putative rare lipoprotein A (rlpA) K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RCFBP_10858 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RCFBP_10654 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rsc01004]
D RCFBP_20427 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RCFBP_20428 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RCFBP_21057 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-acp synthase) K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RCFBP_20424 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase (KAS) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RCFBP_11210 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_11080 putative deshydrogenase oxydoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20426 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20940 fabG; 3-ketoacyl-(Acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_21049 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RCFBP_20018 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RCFBP_20261 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RCFBP_11675 putative lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RCFBP_21007 putative Acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D RCFBP_10976 putative fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RCFBP_11432 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RCFBP_11496 prpE; Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RCFBP_10602 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_21380 putative long-chain-fatty-acid--coa ligase protein (fadD2) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_20639 fadD; Long-chain-fatty-acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RCFBP_21042 long-chain-fatty-acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RCFBP_20429 plsX; Fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RCFBP_10850 plsY; 1-acyl glycerol-3-phosphate synthetase component K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RCFBP_20735 plsC; Phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RCFBP_20959 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rsc01008]
D RCFBP_10279 putative isopenicillin N epimerase protein (class v) K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 01006 Prenyltransferases [BR:rsc01006]
D RCFBP_11172 ispA; geranyltranstransferase (=farnesyldiphosphate synthase) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RCFBP_10637 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RCFBP_20025 uppS; undecaprenyl pyrophosphate synthetase (di-trans, poly-cis-decaprenylcistransferase) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RCFBP_11661 crtB; phytoene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RCFBP_10834 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RCFBP_10761 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RCFBP_21115 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rsc01007]
D RCFBP_20254 gltX; glutamate tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RCFBP_20629 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RCFBP_11184 gluQ; Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RCFBP_20986 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RCFBP_20291 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RCFBP_20266 cysS; cysteine tRNA synthetase (Cysteine--tRNA ligase) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RCFBP_21206 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RCFBP_11040 metG; Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RCFBP_10967 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RCFBP_11156 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RCFBP_10706 leuS; Leucyl-tRNA synthetase (Leucine--tRNA ligase) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RCFBP_20452 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RCFBP_21018 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RCFBP_20217 hisS; Histidyl-tRNA synthetase (Histidine--tRNA ligase) K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RCFBP_20955 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RCFBP_20957 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RCFBP_11110 serS; serine tRNA synthetase; also charges selenocystein tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RCFBP_10644 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RCFBP_11572 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RCFBP_20624 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RCFBP_11576 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RCFBP_11577 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RCFBP_11151 conserved exported protein of unknown function K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D RCFBP_20100 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RCFBP_20470 aspC; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RCFBP_11373 putative methionine aminotransferase, PLP-dependent K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D RCFBP_20040 putative aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RCFBP_10500 hisC; Histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_20576 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RCFBP_11857 bioF; 7-keto-8-aminopelargonic acid synthetase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RCFBP_21297 rocD; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RCFBP_10991 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RCFBP_21416 puuE; 4-aminobutyrate aminotransferase, PLP-dependent K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RCFBP_11858 bioA; Adenosylmethionine--8-amino-7-oxononanoate transaminase, PLP-dependent K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RCFBP_20750 hemL; Glutamate-1-semialdehyde 2,1-aminomutase (aminotransferase), PLP-dependent K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RCFBP_20907 ilvE; Branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RCFBP_10814 Putative Para-aminobenzoate synthase component 1 (Para-aminobenzoate synthase component I) (ADC synthase) (pabB) K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RCFBP_20578 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rsc00194]
D RCFBP_10150 atpC; ATP synthase, F1 sector, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RCFBP_10149 atpD; ATP synthase, F1 sector, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RCFBP_10148 atpG; ATP synthase, F1 sector, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RCFBP_10147 atpA; ATP synthase, F1 sector, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RCFBP_10146 atpH; ATP synthase, F1 sector, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RCFBP_10145 atpF; ATP synthase, F0 sector, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RCFBP_10144 atpE; ATP synthase, F0 sector, subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RCFBP_10143 atpB; ATP synthase, F0 sector, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RCFBP_10142 atpI; ATP synthase, protein I (accesory subunit) K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rsc03000]
D RCFBP_10010 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_20378 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_21321 transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D RCFBP_10827 ada; fused DNA-binding transcriptional dual regulator; O6-methylguanine-DNA methyltransferase; (AraC/Xyl family) (N-terminal); bifunctional K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RCFBP_10893 Putative regulatory protein ada (Regulatory protein of adaptative response) [Includes: Methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase)] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RCFBP_21162 gcvA; transcriptional regulator of Glycine cleavage system operon, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RCFBP_10758 oxyR; Hydrogen peroxide-inducible gene activator; Transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RCFBP_10999 cysB; transcriptional regulator of biosynthesis of L-cysteine and regulator of sulfur assimilation (LysR family) K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D RCFBP_20081 cbl; transcriptional regulator of cysteine biosynthesis and aliphatic sulfonates utilization; LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D RCFBP_11826 mdcR; transcriptional regulator for malonate utilization (LysR family) K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D RCFBP_10702 phcA; transcriptional regulator, LysR family K19624 phcA; LysR family transcriptional regulator, virulence genes transcriptional regulator
D RCFBP_21005 putative TRANSCRIPTIONal REGULATOR, lysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RCFBP_11866 benM; HTH-type transcriptional regulator benM (Ben and cat operon transcriptional regulator, LysR family) K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D RCFBP_10402 glpR; Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RCFBP_20466 rbsR; ribose operon transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RCFBP_20189 conserved protein of unknown function K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RCFBP_10599 putative transcription regulation repressor (fruR), LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D RCFBP_10799 hutC; histidine utilization repressor, transcription regulator GntR K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RCFBP_11388 putative transcription regulator; GntR family K03710 K03710; GntR family transcriptional regulator
D RCFBP_20396 putative transcriptional regulatory dna-binding transcription regulator protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RCFBP_10316 putative transcription regulator, GntR family, aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RCFBP_21415 putative transcriptional regulator, DNA-binding HTH domain (GntR) and aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RCFBP_21435 acrR; transcriptional repressor for acridine efflux pump ACRAB, multidrug efflux system repressor (TetR/AcrR family) K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D RCFBP_21414 putative transcriptional regulator of dUTPase subunit (TetR/AcrR family); similar to E.coli ttk K05501 slmA; TetR/AcrR family transcriptional regulator
D RCFBP_20232 putative transcription regulator protein, TetR-related K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RCFBP_20554 lrp; leucine-binding transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10335 transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10659 putative transcription regulator protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10112 putative transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10748 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_20654 Irp; transcriptional regulator, AsnC/Lrp family (Leucine-responsive regulatory protein) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10190 solR; Transcriptional activator protein solR K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D RCFBP_10118 hmrR; Heavy metal-dependent transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RCFBP_10703 fur; transcriptional repressor of iron transport (Fur family) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RCFBP_21397 putative transcriptional regulator, FUR family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RCFBP_11140 putative transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RCFBP_10048 transcription regulator protein, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RCFBP_11532 putative transcription regulator protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RCFBP_20144 fnr; O2-sensitive transcriptional regulator of ccoNOQP operon K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RCFBP_20462 iscR; DNA-binding transcriptional repressor; iron-sulfur cluster assembly transcription factor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RCFBP_10067 nsrR; HTH-type transcriptional regulator nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D RCFBP_21179 birA; bifunctional protein: biotin operon repressor and biotin-[acetyl-coA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RCFBP_20976 putative transcriptional regulator, FIS family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RCFBP_11900 putative transcription regulator protein (hipB) K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RCFBP_10308 acoR; acetoin catabolism regulatory transcription regulator protein, sigma54 interaction domain K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RCFBP_21327 putative DNA-binding protein K07726 K07726; putative transcriptional regulator
D RCFBP_10167 putA; multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RCFBP_11754 Putative transcription regulator, bolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RCFBP_10141 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RCFBP_10798 hrcA; Heat-inducible transcription repressor, negative regulator of class I heat shock protein K03705 hrcA; heat-inducible transcriptional repressor
D RCFBP_10811 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D RCFBP_20738 pyrR; PyrR bifunctional protein: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase (UPRTase)] K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RCFBP_11463 putative phage transcriptional regulator K07733 alpA; prophage regulatory protein
D RCFBP_20740 conserved protein of unknown function, hypothetical UPF0301 protein, DUF179 domain K07735 algH; putative transcriptional regulator
D RCFBP_21399 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RCFBP_11490 putative dnak suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RCFBP_20685 nrdR; Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D RCFBP_21265 rtcR; sigma 54-dependent transcriptional regulator of rtcBA expression K14414 rtcR; transcriptional regulatory protein RtcR
D RCFBP_10607 mraZ; Protein mraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rsc03021]
D RCFBP_10457 rpoA; RNA polymerase, alpha subunit; RNA polymerase alpha chain family K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RCFBP_10415 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RCFBP_10416 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RCFBP_11260 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RCFBP_11179 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
D RCFBP_20226 rpoS; RNA polymerase sigma factor rpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D RCFBP_10467 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RCFBP_11069 RNA polymerase sigma factor, sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RCFBP_11311 Putative RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RCFBP_21411 putative rna polymerase K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RCFBP_20422 rpoE; RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RCFBP_21113 rpoH; RNA polymerase sigma H (sigma 32) factor; transcription of heat shock and stress proteins K03089 rpoH; RNA polymerase sigma-32 factor
D RCFBP_21080 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D RCFBP_20139 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D RCFBP_20702 nusB; antitermination factor (N utilization substance B) (transcriptional antiterminator) K03625 nusB; transcription antitermination protein NusB
D RCFBP_10409 nusG; transcription termination factor K02601 nusG; transcription termination/antitermination protein NusG
D RCFBP_10525 sspA; stringent starvation protein A, regulator of transcription K03599 sspA; stringent starvation protein A
D RCFBP_10526 sspB; stringent starvation protein B, ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D RCFBP_20421 rseA; Sigma-E factor negative regulatory protein; rseA family K03597 rseA; sigma-E factor negative regulatory protein RseA
D RCFBP_20420 rseB; Sigma-E factor regulatory protein; rseB family K03598 rseB; sigma-E factor negative regulatory protein RseB
D RCFBP_21399 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RCFBP_11490 putative dnak suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RCFBP_11500 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D RCFBP_11263 greB; Transcription elongation factor (Transcript cleavage factor) K04760 greB; transcription elongation factor GreB
D RCFBP_20246 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rsc03019]
D RCFBP_20440 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RCFBP_11199 rng; ribonuclease G (RNase G) K08301 rng; ribonuclease G [EC:3.1.26.-]
D RCFBP_20414 rnc; Ribonuclease III (RNase III) K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RCFBP_20205 rnr; RNase R, 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RCFBP_10694 rnaSA; Guanyl-specific ribonuclease Sa3 precursor (RNase Sa3) K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RCFBP_20526 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RCFBP_11183 rhlE; ATP-dependent RNA helicase, deaD-box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RCFBP_20937 rhlE; ATP-dependent RNA helicase hydrolase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RCFBP_10424 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RCFBP_20305 eno; enolase, phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RCFBP_11321 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RCFBP_20246 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RCFBP_10812 dnaK; Chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D RCFBP_20781 groL; chaperone Hsp60 (GroEL), part of GroE chaperone system K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RCFBP_20213 hfq; RNA chaperone Protein hfq, post-transcriptional regulator K03666 hfq; host factor-I protein
D RCFBP_11515 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RCFBP_10820 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RCFBP_10643 nudH; dinucleotide oligophosphate (alarmone) hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RCFBP_20076 rraA; ribonuclease E (RNase E) inhibitor protein K02553 rraA; regulator of ribonuclease activity A
D RCFBP_21085 conserved protein of unknown function, putative UPF0042 protein (ATP binding, nucleotide binding) K06958 rapZ; RNase adapter protein RapZ
D RCFBP_20178 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rsc03011]
D RCFBP_20572 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RCFBP_20029 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RCFBP_10436 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RCFBP_10456 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RCFBP_10448 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RCFBP_20119 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RCFBP_10426 rpsG; 30S ribosomal subunit protein S7, initiates assembly K02992 RP-S7; small subunit ribosomal protein S7
D RCFBP_10445 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RCFBP_20991 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RCFBP_10429 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RCFBP_10455 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RCFBP_10425 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RCFBP_10454 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RCFBP_10444 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RCFBP_11320 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RCFBP_20535 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RCFBP_10440 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RCFBP_20117 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RCFBP_10434 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RCFBP_10842 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RCFBP_21439 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RCFBP_10411 rplA; 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11 K02863 RP-L1; large subunit ribosomal protein L1
D RCFBP_10433 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RCFBP_10430 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RCFBP_10431 rplD; 50S ribosomal subunit protein L4, regulates expression of S10 operon K02926 RP-L4; large subunit ribosomal protein L4
D RCFBP_10443 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RCFBP_10446 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RCFBP_20116 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RCFBP_10412 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RCFBP_10410 rplK; 50S ribosomal subunit protein L11, N-terminal believed to regulate RelA K02867 RP-L11; large subunit ribosomal protein L11
D RCFBP_10413 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RCFBP_20992 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RCFBP_10441 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RCFBP_10450 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RCFBP_10438 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RCFBP_10458 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RCFBP_10447 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RCFBP_20532 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RCFBP_11575 rplT; 50S ribosomal subunit protein L20, also posttranslational autoregulator K02887 RP-L20; large subunit ribosomal protein L20
D RCFBP_10638 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RCFBP_10435 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RCFBP_10432 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RCFBP_10442 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RCFBP_10639 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RCFBP_10981 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RCFBP_10439 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RCFBP_10449 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RCFBP_20251 rpmE; 50S ribosomal protein L31, type B subfamily K02909 RP-L31; large subunit ribosomal protein L31
D RCFBP_20431 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RCFBP_10980 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RCFBP_21451 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RCFBP_11574 rpmI; 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D RCFBP_10453 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RCFBP_21094 rplY; 5S rRNA binding 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RCFBP_5s_rRNA_1 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RCFBP_5s_rRNA_3 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RCFBP_5s_rRNA_2 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RCFBP_16s_rRNA_1 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_16s_rRNA_2 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_16s_rRNA_3 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_23s_rRNA_1 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RCFBP_23s_rRNA_2 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RCFBP_23s_rRNA_3 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rsc03009]
D RCFBP_20414 rnc; Ribonuclease III (RNase III) K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RCFBP_20526 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RCFBP_20413 era; 30S ribosomal subunit_binding GTPase K03595 era; GTPase
D RCFBP_10640 obgE; GTPase involved in cell partioning and DNA repair K03979 obgE; GTPase [EC:3.6.5.-]
D RCFBP_21399 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RCFBP_11490 putative dnak suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RCFBP_20139 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D RCFBP_20702 nusB; antitermination factor (N utilization substance B) (transcriptional antiterminator) K03625 nusB; transcription antitermination protein NusB
D RCFBP_10409 nusG; transcription termination factor K02601 nusG; transcription termination/antitermination protein NusG
D RCFBP_20741 rsuA; 16S rRNA pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RCFBP_20963 ksgA; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RCFBP_10973 Putative ribosomal RNA small subunit methyltransferase B (rsmB) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RCFBP_21369 rsmB; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RCFBP_21099 conserved protein of unknown function, methylase putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RCFBP_10697 putative ribosomal RNA small subunit methyltransferase E (rsmE) K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RCFBP_10139 gidB; Glucose-inhibited division protein B, S-adenosyl-L-methionine-dependent methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RCFBP_10608 mraW; S-adenosyl-dependent methyl transferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RCFBP_10214 putative Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase, UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RCFBP_20435 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RCFBP_20204 rlmB; tRNA guanosine-2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RCFBP_11504 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RCFBP_11201 conserved protein of unknown function, Belongs to the UPF0247 family K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RCFBP_21394 S-adenosyl-L-methionine-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RCFBP_10095 conserved protein of unknown function, DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RCFBP_10711 putative methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D RCFBP_20221 conserved protein of unknown function, predicted radical SAM enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RCFBP_20224 rumA; 23S rRNA (Uracil-5-)-methyltransferase rumA (23S rRNA(M-5-U1939)-methyltransferase) K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RCFBP_20141 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RCFBP_20439 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RCFBP_11636 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RCFBP_20032 Pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RCFBP_20063 rimL; acetylase for 30S ribosomal subunit protein S18 K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RCFBP_20534 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D RCFBP_11644 putative 2-methylthioadenine synthetase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RCFBP_10673 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RCFBP_20046 putative adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RCFBP_20285 conserved protein of unknown function K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D RCFBP_20440 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RCFBP_11199 rng; ribonuclease G (RNase G) K08301 rng; ribonuclease G [EC:3.1.26.-]
D RCFBP_20739 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RCFBP_21168 dbpA; ATP-dependent RNA helicase, stimulated by 23S rRNA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D RCFBP_20528 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RCFBP_20214 engA; GTPase involved in ribosome synthesis and maintenance K03977 engA; GTPase
D RCFBP_20212 hflX; GTP-binding protein hflX, GTPase activity K03665 hflX; GTPase
D RCFBP_20897 conserved protein of unknown function, translation factor domain, SUA5 type K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RCFBP_11262 putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RCFBP_10032 conserved protein of unknown function K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RCFBP_20137 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RCFBP_20140 conserved protein of unknown function K09748 rimP; ribosome maturation factor RimP
D RCFBP_20631 conserved protein of unknown function K14761 rlbA; ribosome-associated protein
D RCFBP_11202 conserved protein of unknown function, DUF143 K09710 ybeB; ribosome-associated protein
D RCFBP_20949 Putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D RCFBP_11503 putative RNA_binding protein K07574 yhbY; RNA-binding protein
D RCFBP_20524 conserved protein of unknown function; Belongs to the UPF0307 family K09889 yjgA; ribosome-associated protein
D RCFBP_21081 rpoX; sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D RCFBP_10558 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
D RCFBP_20432 conserved protein of unknown function K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rsc03016]
D RCFBP_10694 rnaSA; Guanyl-specific ribonuclease Sa3 precursor (RNase Sa3) K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RCFBP_21359 cca; tRNA nucleotidyl transferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RCFBP_21263 conserved protein of unknown function K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D RCFBP_20254 gltX; glutamate tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RCFBP_10644 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RCFBP_10967 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RCFBP_10706 leuS; Leucyl-tRNA synthetase (Leucine--tRNA ligase) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RCFBP_11040 metG; Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RCFBP_20629 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RCFBP_21206 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RCFBP_20452 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RCFBP_21018 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RCFBP_20624 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RCFBP_11572 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RCFBP_11110 serS; serine tRNA synthetase; also charges selenocystein tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RCFBP_20266 cysS; cysteine tRNA synthetase (Cysteine--tRNA ligase) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RCFBP_11156 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RCFBP_20217 hisS; Histidyl-tRNA synthetase (Histidine--tRNA ligase) K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RCFBP_11576 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RCFBP_11577 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RCFBP_20986 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RCFBP_20291 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RCFBP_20985 dtd; D-Tyr-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RCFBP_20490 putative Alanyl-tRNA synthetase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D RCFBP_20711 trmB; tRNA (guanine-N(7)-)-methyltransferase, SAM-dependent K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RCFBP_11401 truA; tRNA pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RCFBP_20136 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RCFBP_20461 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RCFBP_20897 conserved protein of unknown function, translation factor domain, SUA5 type K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RCFBP_10834 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RCFBP_21447 mnmE; GTPase involved in tRNA modification and in thiophene and furan oxidation K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RCFBP_10138 mnmG; Glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RCFBP_21450 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RCFBP_misc_RNA_2 RNaseP_bact_a K01978 rnpB; M1 RNA
D RCFBP_11255 rph; RNase PH (tRNA nucleotidyltransferase) K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RCFBP_10682 putative Exoribonuclease II (rnb) K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D RCFBP_11906 putative 2h phosphoesterase (2'-5' RNA ligase) protein (ligT) K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RCFBP_10543 putative ATPase component of ABC transporter K06020 ettA; energy-dependent translational throttle protein EttA
D RCFBP_20955 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RCFBP_20957 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RCFBP_11151 conserved exported protein of unknown function K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D RCFBP_11184 gluQ; Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RCFBP_10545 conserved protein of unknown function K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D RCFBP_11897 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RCFBP_20127 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RCFBP_20975 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RCFBP_11643 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D RCFBP_20947 miaB; isopentenyl-adenosine A37 tRNA methylthiolase, Fe-S protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RCFBP_20272 Putative tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RCFBP_20533 trmD; tRNA (guanine-7-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RCFBP_21129 putative tRNA/rRNA methyltransferase (spoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RCFBP_20014 putative tRNA/rRNA methyltransferase, SpoU like K03437 spoU; RNA methyltransferase, TrmH family
D RCFBP_10727 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RCFBP_21278 putative ATP pyrophosphatase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RCFBP_20605 putative regulator, SirA-like domain K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RCFBP_20459 iscA; Fe-S cluster assembly and activation factor K13628 iscA; iron-sulfur cluster assembly protein
D RCFBP_11787 putative aminomethyl transferase K06980 ygfZ; tRNA-modifying protein YgfZ
D RCFBP_11666 trmC; oxidoreductase, FAD-binding family protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D RCFBP_10738 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RCFBP_20675 queC; queuosine biosynthesis protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RCFBP_11898 Putative 6-pyruvoyl tetrahydrobiopterin synthase (ptpS) (PTP synthase) K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RCFBP_11899 conserved protein of unknown function (Organic radical activating enzymes) K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RCFBP_21035 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RCFBP_10856 putative Fe-S electron transport protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RCFBP_10737 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RCFBP_20263 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RCFBP_20064 putative peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RCFBP_11175 ygjD; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RCFBP_10857 conserved protein of unknown function, UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RCFBP_20644 putative activating enzyme (E1 family) of ubiquitin-like proteins; NAD/FAD-binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RCFBP_20205 rnr; RNase R, 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RCFBP_11321 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rsc03012]
D RCFBP_20138 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RCFBP_11573 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RCFBP_20056 putative ABC transporter, ATP binding component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RCFBP_20028 tsf; Elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D RCFBP_10428 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RCFBP_10407 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RCFBP_10427 fusA; protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D RCFBP_10555 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D RCFBP_20026 frr; Ribosome recycling factor (Ribosome-releasing factor) K02838 frr; ribosome recycling factor
D RCFBP_10553 prmC; N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RCFBP_21095 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RCFBP_11153 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RCFBP_10452 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RCFBP_20408 efp; Elongation factor P (EF-P) K02356 efp; elongation factor P
D RCFBP_20450 prfB; peptide chain release factor RF-2; programmed frameshift K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rsc03110]
D RCFBP_10919 clpA; ATP-dependent Clp protease ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RCFBP_20091 clpB; Chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RCFBP_11669 clpX; ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RCFBP_21403 hslU; ATPase component of the HslUV protease, molecular chaperone K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RCFBP_20488 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RCFBP_10812 dnaK; Chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D RCFBP_20456 hscA; Fe-S clusters assembly chaperone (Hsp70 family), ATPase activity K04044 hscA; molecular chaperone HscA
D RCFBP_20547 Heat shock protein K04046 yegD; hypothetical chaperone protein
D RCFBP_20781 groL; chaperone Hsp60 (GroEL), part of GroE chaperone system K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RCFBP_10813 dnaJ; heat shock protein (Hsp40), co-chaperone with DnaK K03686 dnaJ; molecular chaperone DnaJ
D RCFBP_20457 hscB; Fe-S clusters assembly co-chaperone protein, regulator of the ATP-dependent activity of HscA K04082 hscB; molecular chaperone HscB
D RCFBP_20302 hslO; 33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33) K04083 hslO; molecular chaperone Hsp33
D RCFBP_10808 grpE; Hsp 24 nucleotide exchange factor, Ribulose-phosphate 3-epimerase activity K03687 GRPE; molecular chaperone GrpE
D RCFBP_10805 hslR; ribosome-associated heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D RCFBP_20782 groS; chaperone Hsp10 (GroES), part of GroE chaperone system K04078 groES; chaperonin GroES
D RCFBP_20419 degQ; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RCFBP_11505 ftsH; Cell division protein, ATP-dependent zinc-metallo protease; AAA ATPase and peptidase M41 families K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RCFBP_10143 atpB; ATP synthase, F0 sector, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RCFBP_21131 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D RCFBP_21407 conserved exported protein of unknown function K09796 pccA; periplasmic copper chaperone A
D RCFBP_10794 putative extracellular protease precursor, subtilisin-like protein K14645 K14645; serine protease [EC:3.4.21.-]
D RCFBP_10793 putative extracellular subtilisin-like protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D RCFBP_20268 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RCFBP_20269 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RCFBP_11673 ppiD; peptidyl-prolyl cis-trans isomerase (rotamase D) K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RCFBP_11561 fkpA; Peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RCFBP_20636 fbp; Peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RCFBP_10983 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D RCFBP_20284 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RCFBP_11753 Putative Peptidylprolyl isomerase; exported protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RCFBP_20965 surA; peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RCFBP_20245 trxA; thioredoxin K03671 TXN; thioredoxin
D RCFBP_20640 Putative thioredoxin K05838 ybbN; putative thioredoxin
D RCFBP_21132 grxC; glutaredoxin K03676 grxC; glutaredoxin 3
D RCFBP_10552 putative glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D RCFBP_21208 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RCFBP_20058 dsbB; disulfide bond formation protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D RCFBP_10564 putative thiol:disulphide interchange protein (DsbC-like) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RCFBP_10460 dipZ; thiol:disulfide interchange protein, cytochrome c-type biogenesis, N-terminal interacts with and activates DsbC K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:rsc04131]
D RCFBP_20222 ndk; Nucleoside diphosphate kinase (NDK) (NDP kinase) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RCFBP_11289 conserved membrane protein of unknown function, UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RCFBP_10700 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RCFBP_21134 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RCFBP_10194 ttuE; Pyruvate kinase; tartrate degradation K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RCFBP_20902 pykA; pyruvate kinase II, glucose-stimulated K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RCFBP_20488 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rsc03051]
D RCFBP_20488 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rsc03032]
D RCFBP_11492 rnhA; Ribonuclease H (RNase H) K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RCFBP_10010 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_20378 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_10104 hupB; DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D RCFBP_11671 hupB; DNA-binding protein HU-beta, transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D RCFBP_10875 hupB; DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D RCFBP_11689 hupB; DNA-binding protein HU-beta, transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D RCFBP_11578 ihfA; integration host factor (IHF), alpha subunit K04764 ihfA; integration host factor subunit alpha
D RCFBP_20571 ihfB; Integration host factor subunit beta (IHF-beta) K05788 ihfB; integration host factor subunit beta
D RCFBP_10001 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D RCFBP_20115 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RCFBP_11178 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RCFBP_21065 ssb; ssDNA-binding protein, controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D RCFBP_11190 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RCFBP_10002 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RCFBP_11012 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RCFBP_10708 holA; DNA-directed DNA polymerase, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RCFBP_11790 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RCFBP_11460 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RCFBP_20242 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RCFBP_20015 rnhB; Ribonuclease HII (RNase HII) K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RCFBP_11162 polA; DNA polymerase I (POL I) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RCFBP_20035 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RCFBP_10822 hda; regulatory factor involved in inactivation of DnaA; probable ATPase K10763 hda; DnaA-homolog protein
D RCFBP_20580 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RCFBP_10003 gyrB; DNA gyrase, subunit B (type II topoisomerase) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RCFBP_20503 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RCFBP_20505 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RCFBP_21378 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rsc03036]
D RCFBP_10010 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_20378 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_20414 rnc; Ribonuclease III (RNase III) K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RCFBP_10947 Histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D RCFBP_10104 hupB; DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D RCFBP_11671 hupB; DNA-binding protein HU-beta, transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D RCFBP_10875 hupB; DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D RCFBP_11689 hupB; DNA-binding protein HU-beta, transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D RCFBP_11578 ihfA; integration host factor (IHF), alpha subunit K04764 ihfA; integration host factor subunit alpha
D RCFBP_20571 ihfB; Integration host factor subunit beta (IHF-beta) K05788 ihfB; integration host factor subunit beta
D RCFBP_10001 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D RCFBP_10760 putative DNA-binding protein, dps family K04047 dps; starvation-inducible DNA-binding protein
D RCFBP_20976 putative transcriptional regulator, FIS family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RCFBP_20213 hfq; RNA chaperone Protein hfq, post-transcriptional regulator K03666 hfq; host factor-I protein
D RCFBP_20554 lrp; leucine-binding transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10335 transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10659 putative transcription regulator protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10112 putative transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_10748 transcriptional regulator, AsnC-family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_20654 Irp; transcriptional regulator, AsnC/Lrp family (Leucine-responsive regulatory protein) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RCFBP_20037 smc; Chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RCFBP_11035 scpA; Segregation and condensation protein K05896 scpA; segregation and condensation protein A
D RCFBP_20142 scpB; chromosome segregation and condensation protein K06024 scpB; segregation and condensation protein B
D RCFBP_10620 ftsA; Cell division protein ftsA, with ATPase domain, involved in recruitment of FtsK to Z ring K03590 ftsA; cell division protein FtsA
D RCFBP_20304 ftsB; Cell division protein ftsB homolog K05589 ftsB; cell division protein FtsB
D RCFBP_10610 ftsI; division-specific transpeptidase, penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RCFBP_11091 ftsK; DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RCFBP_10609 putative Cell division protein ftsL K03586 ftsL; cell division protein FtsL
D RCFBP_10619 ftsQ; septal cell division protein K03589 ftsQ; cell division protein FtsQ
D RCFBP_10615 ftsW; essential cell division gene, stablilzes FtsZ ring, required for PBP2 expression K03588 ftsW; cell division protein FtsW
D RCFBP_10621 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D RCFBP_11019 putative cell division protein ZapA-like K09888 zapA; cell division protein ZapA
D RCFBP_10631 conserved protein of unknown function, UPF0289 family K18778 zapD; cell division protein ZapD
D RCFBP_20155 putative ATPase, with nucleoside triP hydrolase domain K06916 zapE; cell division protein ZapE
D RCFBP_10858 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RCFBP_21436 acrA; component of acridine efflux pump, multidrug efflux system K03585 acrA; membrane fusion protein, multidrug efflux system
D RCFBP_10099 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D RCFBP_10098 minD; Septum site-determining protein minD (Cell division inhibitor minD) K03609 minD; septum site-determining protein MinD
D RCFBP_10097 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D RCFBP_21414 putative transcriptional regulator of dUTPase subunit (TetR/AcrR family); similar to E.coli ttk K05501 slmA; TetR/AcrR family transcriptional regulator
D RCFBP_21385 mreB; actin-like component MreB (cell wall structural complex MreBCD, DNA segregation) K03569 mreB; rod shape-determining protein MreB and related proteins
D RCFBP_21384 mreC; actin-like component MreC (cell wall structural complex MreBCD) K03570 mreC; rod shape-determining protein MreC
D RCFBP_21383 mreD; transmembrane component MreD (cell wall structural complex MreBCD) K03571 mreD; rod shape-determining protein MreD
D RCFBP_21381 mrdB; cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA
D RCFBP_10140 parA; chromosome partitioning protein ParB K03496 parA; chromosome partitioning protein
D RCFBP_11033 conserved protein of unknown function, Cobyrinic acid a,c-diamide synthase domain K03496 parA; chromosome partitioning protein
D RCFBP_10141 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RCFBP_20503 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RCFBP_20505 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RCFBP_10138 mnmG; Glucose-inhibited division protein A, tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RCFBP_10139 gidB; Glucose-inhibited division protein B, S-adenosyl-L-methionine-dependent methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RCFBP_21393 xerC; site-specific tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D RCFBP_10852 xerD; site-specific tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D RCFBP_11042 mrp; Na+/H+ antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RCFBP_10462 engB; probable GTP-binding protein engB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rsc03400]
D RCFBP_10853 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RCFBP_10892 ogt; Methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RCFBP_20742 phr; deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RCFBP_10570 ung; uracil-DNA-glycosylase (UDG) K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RCFBP_21087 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RCFBP_20474 nth; endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase, acts on 5-formyluracil and 5-hydroxymethyluracil K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RCFBP_10629 mutT; Mutator mutT protein (7, 8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RCFBP_10962 dut; deoxyuridinetriphosphatase (fragment) K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RCFBP_10827 ada; fused DNA-binding transcriptional dual regulator; O6-methylguanine-DNA methyltransferase; (AraC/Xyl family) (N-terminal); bifunctional K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RCFBP_10830 alkB; Alpha-ketoglutarate-dependent dioxygenase alkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D RCFBP_20062 ung; uracil-DNA glycosylase,phage-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RCFBP_20265 putative DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RCFBP_10893 Putative regulatory protein ada (Regulatory protein of adaptative response) [Includes: Methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase)] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RCFBP_21089 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RCFBP_11600 xthA; EXODEOXYRIBONUCLEASE III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RCFBP_21313 putative exodeoxyribonuclease III/endonuclease/phosphatase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RCFBP_20319 recJ; Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RCFBP_20035 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RCFBP_11162 polA; DNA polymerase I (POL I) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RCFBP_21067 uvrA; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC K03701 uvrA; excinuclease ABC subunit A
D RCFBP_20469 uvrB; ATP-dependent DNA excision repair enzyme, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
D RCFBP_20406 uvrC; UvrABC system protein C (Excinuclease ABC subunit C) K03703 uvrC; excinuclease ABC subunit C
D RCFBP_11157 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RCFBP_10415 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RCFBP_10416 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RCFBP_10457 rpoA; RNA polymerase, alpha subunit; RNA polymerase alpha chain family K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RCFBP_11260 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RCFBP_11651 mfd; transcription-repair ATP-dependent coupling factor, helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RCFBP_20282 mutS; methyl-directed DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D RCFBP_10835 mutL; methyl-directed mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D RCFBP_10312 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RCFBP_10868 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RCFBP_11190 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RCFBP_10002 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RCFBP_11012 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RCFBP_10708 holA; DNA-directed DNA polymerase, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RCFBP_11790 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RCFBP_11460 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RCFBP_20242 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RCFBP_21065 ssb; ssDNA-binding protein, controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D RCFBP_20924 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D RCFBP_20980 ruvA; subunit A of RuvABC Holliday junction resolvasome, regulatory subunit K03550 ruvA; holliday junction DNA helicase RuvA
D RCFBP_20981 ruvB; ATP-dependent DNA helicase, subunit B of RuvABC Holliday junction resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RCFBP_20978 ruvC; endodeoxyribonuclease, subunit C of RuvABC Holliday junction resolvasome K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RCFBP_10166 priA; Primosome factor n' (replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RCFBP_20118 putative rimosomal replication protein N (priB) K02686 priB; primosomal replication protein N
D RCFBP_20059 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D RCFBP_10739 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RCFBP_20412 recO; DNA repair protein recO (Recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O)
D RCFBP_20239 recR; Recombination protein recR K06187 recR; recombination protein RecR
D RCFBP_10796 recN; DNA repair protein recN (Recombination protein N) K03631 recN; DNA repair protein RecN (Recombination protein N)
D RCFBP_20848 rdgC; Recombination associated protein K03554 rdgC; recombination associated protein RdgC
D RCFBP_20243 putative helicase, uvrD subfamily K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RCFBP_20244 putative helicase, C_term RecB family exonuclease K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RCFBP_11063 conserved protein of unknown function K15342 cas1; CRISP-associated protein Cas1
D RCFBP_11207 putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RCFBP_20892 ATP-dependent DNA helicase, Ku domain K10979 ku; DNA end-binding protein Ku
D RCFBP_20893 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RCFBP_20580 gyrA; DNA gyrase, subunit A, type II topoisomerase K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RCFBP_10003 gyrB; DNA gyrase, subunit B (type II topoisomerase) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RCFBP_10104 hupB; DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D RCFBP_11671 hupB; DNA-binding protein HU-beta, transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D RCFBP_10875 hupB; DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D RCFBP_11689 hupB; DNA-binding protein HU-beta, transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D RCFBP_20976 putative transcriptional regulator, FIS family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RCFBP_11578 ihfA; integration host factor (IHF), alpha subunit K04764 ihfA; integration host factor subunit alpha
D RCFBP_20571 ihfB; Integration host factor subunit beta (IHF-beta) K05788 ihfB; integration host factor subunit beta
D RCFBP_10424 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RCFBP_10947 Histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D RCFBP_11594 dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RCFBP_20122 lexA; transcriptional lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RCFBP_20923 recX; recombination regulator RecX (Modulates recA activity) K03565 recX; regulatory protein
D RCFBP_10186 rep; ATP-dependent DNA helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D RCFBP_11634 putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RCFBP_10655 nrdA; Ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RCFBP_10656 nrdB; ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rsc03029]
D RCFBP_10523 petB; cytochrome bC1 complex (ubiquinol:ferricytochrome c oxidoreductase), transmembrane subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RCFBP_20138 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RCFBP_11573 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RCFBP_20028 tsf; Elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D RCFBP_10428 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RCFBP_10407 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RCFBP_10427 fusA; protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D RCFBP_20413 era; 30S ribosomal subunit_binding GTPase K03595 era; GTPase
D RCFBP_20986 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RCFBP_10706 leuS; Leucyl-tRNA synthetase (Leucine--tRNA ligase) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RCFBP_21018 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RCFBP_21206 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RCFBP_21387 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RCFBP_20885 putative Glutamyl-tRNA amidotransferase/amidase (gatA) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RCFBP_21391 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RCFBP_21386 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C (Glu-ADT subunit C) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RCFBP_20672 Putative DNA/RNA non-specific endonuclease protein K01173 ENDOG; endonuclease G, mitochondrial
D RCFBP_21065 ssb; ssDNA-binding protein, controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein
D RCFBP_20021 putative outer membrane protein assembly factor, bacterial surface antigen domain (D15) K07277 SAM50; outer membrane protein insertion porin family
D RCFBP_10812 dnaK; Chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D RCFBP_10808 grpE; Hsp 24 nucleotide exchange factor, Ribulose-phosphate 3-epimerase activity K03687 GRPE; molecular chaperone GrpE
D RCFBP_20781 groL; chaperone Hsp60 (GroEL), part of GroE chaperone system K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RCFBP_20782 groS; chaperone Hsp10 (GroES), part of GroE chaperone system K04078 groES; chaperonin GroES
D RCFBP_10813 dnaJ; heat shock protein (Hsp40), co-chaperone with DnaK K03686 dnaJ; molecular chaperone DnaJ
D RCFBP_20461 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RCFBP_20457 hscB; Fe-S clusters assembly co-chaperone protein, regulator of the ATP-dependent activity of HscA K04082 hscB; molecular chaperone HscB
D RCFBP_10552 putative glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D RCFBP_11042 mrp; Na+/H+ antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RCFBP_21115 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RCFBP_21122 ctaG; Cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RCFBP_21116 ctaA; cytochrome C oxidase assembly protein, AA3 subunit-controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RCFBP_21448 yidC; cytoplasmic insertase, essential for proper integration of ATPase into the membrane K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RCFBP_21118 putative cytochrome oxidase complex biogenesis factor K14998 SURF1; surfeit locus 1 family protein
D RCFBP_11482 putative transmembrane protein K07152 SCO1; protein SCO1
D RCFBP_21114 putative cytochrome c oxidase assembly factor, scoC K07152 SCO1; protein SCO1
D RCFBP_20488 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rsc02000]
D RCFBP_11196 msbA; Lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RCFBP_21006 ABC transporter; putative xenobiotic-transporting ATPase K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RCFBP_21028 putative ABC TRANSPORTER, ATP-binding membrane component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D RCFBP_20507 uup; fused ATP-binding subunit of ABC superfamily protein involved in precise excision of transposons K15738 uup; ABC transport system ATP-binding/permease protein
D RCFBP_20089 cysP; thiosulfate transport protein; ABC superfamily, periplasmic and binding component K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RCFBP_20084 cysT; thiosulfate transport protein; ABC superfamily, membrane component K02046 cysU; sulfate/thiosulfate transport system permease protein
D RCFBP_20083 cysW; thiosulfate transport protein; ABC superfamily, membrane component K02047 cysW; sulfate/thiosulfate transport system permease protein
D RCFBP_20082 cysA; thiosulfate transport protein; ABC transporter, ATP-binding component K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RCFBP_11296 putative ABC-type tungstate transport system K05772 tupA; tungstate transport system substrate-binding protein
D RCFBP_10816 putative molybdenum transport system permease protein modB K05773 tupB; tungstate transport system permease protein
D RCFBP_10815 ABC transporter related, ATP binding, putative Heme-transporting ATPase K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RCFBP_21106 nasF; Nitrate ABC transporter, periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RCFBP_21107 nasE; nitrate ABC transporter K15577 nrtB; nitrate/nitrite transport system permease protein
D RCFBP_21108 nasD; nitrate ABC transporter, ATP-binding component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RCFBP_10073 putative ABC transporter, periplasmic-binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D RCFBP_20235 putative ABC transporter, periplasmic-binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D RCFBP_20233 putative ABC-type transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D RCFBP_20234 putative ABC-type multidrug transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RCFBP_10514 putative iron(III)-binding periplasmic protein precursor (fbpA) K02012 afuA; iron(III) transport system substrate-binding protein
D RCFBP_10517 putative iron(III)-binding periplasmic protein precursor (fbpA) K02012 afuA; iron(III) transport system substrate-binding protein
D RCFBP_10513 putative Ferric transport system permease protein fbpB K02011 afuB; iron(III) transport system permease protein
D RCFBP_10512 putative atp-binding abc transporter protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RCFBP_11745 Putative Spermidine/putrescine ABC transpoter (substrate binding protein) (potD) K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RCFBP_11796 putative ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RCFBP_11743 putative spermidine/putrescine transport system permease (potC) K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RCFBP_11797 putative ABC transporter, membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RCFBP_11798 putative ABC transporter, membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RCFBP_11744 putative polyamine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RCFBP_11746 potA; Spermidine/putrescine ABC transporter ATP-binding subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RCFBP_11799 putative ABC transporter, ATP-binding component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RCFBP_10882 putative ABC-type glycine betaine transport system, Substrate-binding inner membrane component K05845 opuC; osmoprotectant transport system substrate-binding protein
D RCFBP_10092 Putative binding-protein-dependent transporter K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RCFBP_10091 putative ABC transporter, taurine ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RCFBP_20463 rbsB; ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RCFBP_20465 rbsC; D-ribose transporter subunit; membrane component of ABC superfamily K10440 rbsC; ribose transport system permease protein
D RCFBP_20464 rbsA; fused D-ribose transporter subunits of ABC superfamily: ATP-binding components K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RCFBP_20188 putative rhizopine-binding protein precursor (mocB) K17213 K17213; inositol transport system substrate-binding protein
D RCFBP_20186 putative sugar transmembrane abc transporter protein (rbsC) K17214 K17214; inositol transport system permease protein
D RCFBP_20187 putative ribose/galactose/methyl galactoside import ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D RCFBP_10394 putative ABC-type sugar transporter, probable sugar binding precursor K17321 glpV; glycerol transport system substrate-binding protein
D RCFBP_10397 putative ABC transporter permease K17322 glpP; glycerol transport system permease protein
D RCFBP_10396 putative sugar ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D RCFBP_10399 ugpC; sn-glycerol-3-phosphate transport ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D RCFBP_10398 ugpC; sn-glycerol-3-phosphate transport ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D RCFBP_20164 ugpB; Glycerol-3-phosphate-binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RCFBP_20163 ugpA; sn-glycerol-3-phosphate transport system permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RCFBP_20162 ugpE; sn-glycerol-3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RCFBP_20161 ugpC; sn-glycerol-3-phosphate transport ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RCFBP_11219 putative outer membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RCFBP_11221 putative ABC transport system (permease protein) K23535 nupB; general nucleoside transport system permease protein
D RCFBP_11220 putative ABC transport system (permease protein) K23536 nupC; general nucleoside transport system permease protein
D RCFBP_11222 rbsA; Monosaccharide-transporting ATPase (ABC superfamily) K23537 nupA; general nucleoside transport system ATP-binding protein
D RCFBP_20668 Putative ABC type uncharacterized transport system permease component K02069 STAR2; UDP-glucose/iron transport system permease protein
D RCFBP_20667 putative ABC transporter ATP-binding and permease component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D RCFBP_10490 putative ABC-type transporter, periplasmic binding component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RCFBP_21176 putative ABC-type transporter, periplasmic component (resistance to organic solvents) K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RCFBP_10489 conserved membrane protein of unknown function, DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RCFBP_21178 putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RCFBP_10488 putative ABC transporter, atp-binding component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RCFBP_21177 putative ATP binding ABC transporter protein (resistance to organic solvents) K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RCFBP_21175 conserved exported protein of unknown function K18480 linN; cholesterol transport system auxiliary component
D RCFBP_10492 putative ABC-type toluene transporter, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D RCFBP_10493 conserved protein of unknown function, STAS domain K07122 mlaB; phospholipid transport system transporter-binding protein
D RCFBP_11508 pstS; Phosphate-binding protein pstS precursor (PBP), ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D RCFBP_10157 pstS; Phosphate-binding protein pstS precursor (PBP), ABC superfamily K02040 pstS; phosphate transport system substrate-binding protein
D RCFBP_11509 pstC; Phosphate transport system permease, ABC transporter K02037 pstC; phosphate transport system permease protein
D RCFBP_11510 pstA; Phosphate transport system permease, ABC transporter K02038 pstA; phosphate transport system permease protein
D RCFBP_11511 pstB; Phosphate import ATP-binding protein, ABC transporter K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RCFBP_21002 gltI; glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_21360 gltI; glutamate/aspartate transport protein; ABC superfamily, periplasmic binding component K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_11134 gltI; glutamate/aspartate ABC transporter,periplasmic binding subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RCFBP_21000 gltK; glutamate/aspartate transport protein; ABC superfamily, membrane component K10002 gltK; glutamate/aspartate transport system permease protein
D RCFBP_21001 gltJ; glutamate/aspartate transport protein; ABC superfamily, membrane component K10003 gltJ; glutamate/aspartate transport system permease protein
D RCFBP_20999 gltL; glutamate/aspartate transport protein; ABC superfamily, atp_binding component K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RCFBP_10137 putative amino-acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10168 putative ABC-type branched-chain amino acid transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_11319 putative branched amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10123 putative branched-chain amino acid transport system permease, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_11759 putative ABC-type branched-chain amino acid transporter, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10985 putative leucine transporter subunit; periplasmic-binding component of ABC superfamily (livK) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10998 putative branched-chain amino acid ABC transporter, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RCFBP_10124 putative Branched-chain amino acid transport system permease, membrane component (livH) K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_11760 putative ABC-type branched-chain amino acid transporter, membrane component (livH) K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_10986 livH; leucine/isoleucine/valine transporter subunit; membrane component of ABC superfamily K01997 livH; branched-chain amino acid transport system permease protein
D RCFBP_10987 livM; leucine/isoleucine/valine transporter subunit; Inner-membrane translocator, membrane component of ABC superfamily K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_10125 putative Branched-chain amino acid transport system permease, membrane component (livM) K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_11761 putative ABC-type branched-chain amino acid transporter, membrane component K01998 livM; branched-chain amino acid transport system permease protein
D RCFBP_10121 putative branched-chain amino acid transport system permease, ATP binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_11762 putative ABC-type branched-chain amino acid transporter, atp_binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10988 livG; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10989 livF; leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10122 putative leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily (livF) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_11763 putative ABC-type branched-chain amino acid transporter, ATP_binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RCFBP_10079 metQ; DL-methionine transporter subunit; periplasmic-binding component of ABC superfamily K02073 metQ; D-methionine transport system substrate-binding protein
D RCFBP_20559 metQ; D-and L-methionine ABC transporter, periplasmic component K02073 metQ; D-methionine transport system substrate-binding protein
D RCFBP_20560 metI; D-and L-methionine ABC transporter, membrane component K02072 metI; D-methionine transport system permease protein
D RCFBP_20561 metN; D-and L-methionine ABC transporter, atp_binding component K02071 metN; D-methionine transport system ATP-binding protein
D RCFBP_11347 putative Branched-chain amino acid ABC transporter, periplasmic amino acid-binding component (LivK family) K11959 urtA; urea transport system substrate-binding protein
D RCFBP_11348 putative high-affinity branched-chain amino acid transport system permease (livH or livM) K11960 urtB; urea transport system permease protein
D RCFBP_11349 putative high-affinity branched-chain amino acid transport system permease (livM or livH) K11961 urtC; urea transport system permease protein
D RCFBP_11350 livG; High-affinity branched-chain amino acid transport ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D RCFBP_11351 livF; High-affinity branched-chain amino acid transport ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D RCFBP_11752 putative ABC-type transporter, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RCFBP_11751 putative ABC transporter, membrane component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RCFBP_11750 putative ABC transporter, ATP-BINDING component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RCFBP_20811 putative bacterial extracellular solute-binding; ABC transporter protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RCFBP_11138 putative amino-acid-binding periplasmic abc transporter protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RCFBP_10049 putative amino acid-binding periplasmic (Pbp) abc transporter protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RCFBP_10050 putative amino-acid ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein
D RCFBP_11136 putative amino acid transmembrane abc transporter protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D RCFBP_11137 putative amino acid transmembrane abc transporter protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D RCFBP_11135 gltL; glutamate/aspartate transport protein; ABC superfamily, atp_binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RCFBP_10051 glnQ; high-affinity glutamine transport protein, ABC transporter, ATP binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RCFBP_20052 putative dipeptide ABC transporter, periplasmic_binding component K13889 gsiB; glutathione transport system substrate-binding protein
D RCFBP_20051 dppB; dipeptide transporter; membrane component of ABC superfamily K13890 gsiC; glutathione transport system permease protein
D RCFBP_20050 dppC; D-ala-D-ala transporter subunit; membrane component of ABC superfamily K13891 gsiD; glutathione transport system permease protein
D RCFBP_20053 putative oligopeptide ABC transporter, fused atp_binding components K13892 gsiA; glutathione transport system ATP-binding protein
D RCFBP_10589 putative periplasmic dipeptide transport protein precursor (dppA-like or gsiB-like) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RCFBP_11378 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RCFBP_11446 dppA; dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RCFBP_21401 dppA; periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RCFBP_11450 dppB; dipeptide transport protein 1 (ABC superfamily, membrane component) K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RCFBP_10590 dppB; dipeptide transport protein 1 (ABC superfamily, membrane component) K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RCFBP_11449 dppC; Dipeptide transport system permease protein (ABC superfamily, membrane) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RCFBP_10591 dppC; Dipeptide transport system permease protein (ABC superfamily, membrane) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RCFBP_11448 dppD; Dipeptide transport ATP-binding (ABC superfamily) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RCFBP_10592 dppD; Dipeptide transport ATP-binding (ABC superfamily) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RCFBP_10593 dppF; Dipeptide transport ATP-binding (ABC superfamily) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RCFBP_11447 dppF; Dipeptide transport ATP-binding (ABC superfamily) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RCFBP_20260 putative ABC-type transport system, periplasmic component K13893 yejA; microcin C transport system substrate-binding protein
D RCFBP_20259 putative inner membrane ABC transporter permease K13894 yejB; microcin C transport system permease protein
D RCFBP_20258 putative ABC-type transport system, permease component K13895 yejE; microcin C transport system permease protein
D RCFBP_20257 putative ABC-type transport system, ATP binding component K13896 yejF; microcin C transport system ATP-binding protein
D RCFBP_11028 btuF; vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RCFBP_11022 btuC; cobalamin transport system, inner membrane component (ABC superfamily, membrane) K02015 ABC.FEV.P; iron complex transport system permease protein
D RCFBP_11023 putative vitamin B12-transporting ATPase BtuD-like K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RCFBP_11010 putative permease, predicted YjgP/YjgQ family K07091 lptF; lipopolysaccharide export system permease protein
D RCFBP_11009 putative permease, predicted YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D RCFBP_21079 putative ABC transport protein, atp_binding component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RCFBP_11411 putative ABC transporter transmembrane permease protein K09694 nodJ; lipooligosaccharide transport system permease protein
D RCFBP_11412 putative ABC transporter, ATP-binding component K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RCFBP_20317 lolE; outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily K09808 lolC_E; lipoprotein-releasing system permease protein
D RCFBP_20316 lolD; outer membrane lipoproteins ABC transporter, ATP_binding component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RCFBP_10495 putative ABC transporter permease protein, membrane component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RCFBP_21289 putative ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RCFBP_10494 putative ABC transporter, ATPase component, putative sulfate-transporting K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RCFBP_21290 putative ABC transporter, ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RCFBP_11298 putative ABC transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D RCFBP_11676 putative ABC transporter, ATP binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RCFBP_10859 conserved membrane protein of unknown function, Predicted Na+ dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RCFBP_20253 multidrug efflux system transporter K26939 norM; MATE family, multidrug efflux pump
D RCFBP_20807 putative transport protein (MFS superfamily); putative tartrate transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D RCFBP_20061 putative transporter, MSF family K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D RCFBP_21302 ampG; muropeptide transport protein (MFS family) K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RCFBP_11223 putative bicyclomycin/multidrug efflux system (major facilitator superfamily) K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RCFBP_20280 putative transmembrane efflux protein (major facilitator superfamily) K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RCFBP_10723 putative multidrug resistance transmembrane protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RCFBP_20135 emrB; Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RCFBP_11072 putative transporter; MFS superfamily K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D RCFBP_10379 transport protein, MFS family K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D RCFBP_10752 putative metabolite transporter, MFS superfamily K08368 yaaU; MFS transporter, putative metabolite transport protein
D RCFBP_21139 ptsI; PTS family enzyme I and Hpr components, PEP-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RCFBP_10598 fruB; phosphotransferase system, fructose-specific EI/HPr/EIIA components K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D RCFBP_10596 fruA; fused fructose-specific PTS enzymes: IIBcomponent; IIC components K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RCFBP_21141 PTS system fructose IIA component (phosphoenolpyruvate-dependent sugar phosphotransferase system) K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RCFBP_21082 ptsN; Phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), EIIA 2 component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RCFBP_21033 conserved membrane protein of unknown function, Potassium channel domain K08715 IRPC; inward rectifier potassium channel
D RCFBP_21144 amtB; ammonium transport protein (Amt family) K03320 amt; ammonium transporter, Amt family
D RCFBP_10729 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_20598 gst; glutathione S-transferase protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_10378 gstL; Glutathione s-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_10158 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_20865 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_11372 Glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_21358 putative Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_11802 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_20494 Glutathione S transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RCFBP_10525 sspA; stringent starvation protein A, regulator of transcription K03599 sspA; stringent starvation protein A
D RCFBP_20223 conserved membrane protein of unknown function, UPF0005 K19416 yccA; modulator of FtsH protease
D RCFBP_10521 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D RCFBP_10785 putative small-conductance mechanosensitive channel protein (mscS) K03442 mscS; small conductance mechanosensitive channel
D RCFBP_10380 conserved membrane protein of unknown function K22044 ybiO; moderate conductance mechanosensitive channel
D RCFBP_11421 exbB; Biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D RCFBP_10867 exbB; biopolymer transport K03561 exbB; biopolymer transport protein ExbB
D RCFBP_10866 exbD; Biopolymer transport K03559 exbD; biopolymer transport protein ExbD
D RCFBP_11420 exbD; Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D RCFBP_20681 tolQ; Protein tolQ, essential components of the Tol-Pal system K03562 tolQ; biopolymer transport protein TolQ
D RCFBP_20680 tolR; Protein tolR, component of the tol-pal system K03560 tolR; biopolymer transport protein TolR
D RCFBP_10687 corA; magnesium/nickel/cobalt transporter K03284 corA; magnesium transporter
D RCFBP_20093 crcB; molybdopterin cofactor biosynthesis K06199 crcB; fluoride exporter
D RCFBP_10636 putative cbs (Cystathionine-beta-synthase) domain harboring transporter transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RCFBP_11122 conserved membrane protein of unknown function, DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RCFBP_20238 putative carbohydrate-selective porin OprB K16080 mnoP; high affinity Mn2+ porin
D RCFBP_20581 putative outer membrane protein, ompA domain K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RCFBP_11021 Putative vitamin B12 transporter, tonB dependent (btuB) K16092 btuB; vitamin B12 transporter
D RCFBP_10536 putative TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RCFBP_20615 putative ferrisiderophore receptor signal peptide protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RCFBP_10721 putative ferrichrome outer membrane transporter, TonB-dependent (fhuA) K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RCFBP_20719 tolC; Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D RCFBP_21438 putative outer membrane protein (Probable drug efflux lipoprotein) K18139 oprM; outer membrane protein, multidrug efflux system
D RCFBP_20021 putative outer membrane protein assembly factor, bacterial surface antigen domain (D15) K07277 SAM50; outer membrane protein insertion porin family
D RCFBP_20215 conserved protein of unknown function, quinoprotein alcohol dehydrogenase domain K17713 bamB; outer membrane protein assembly factor BamB
D RCFBP_20288 putative lipoprotein, NlpBDapX domain K07287 bamC; outer membrane protein assembly factor BamC
D RCFBP_11635 putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain K05807 bamD; outer membrane protein assembly factor BamD
D RCFBP_10704 putative lipoprotein, SmpA/OmlA family K06186 bamE; outer membrane protein assembly factor BamE
D RCFBP_11037 Conserved protein of unknown function; similar to D15 or Oma87 antigen K07278 tamA; translocation and assembly module TamA
D RCFBP_11038 conserved protein of unknown function, DUF490 K09800 tamB; translocation and assembly module TamB
D RCFBP_21078 conserved exported protein of unknown function, putative OstA-like protein K09774 lptA; lipopolysaccharide export system protein LptA
D RCFBP_21077 conserved exported protein of unknown function K11719 lptC; lipopolysaccharide export system protein LptC
D RCFBP_20966 imp; exported protein required for envelope biosynthesis and integrity (ORGANIC SOLVENT TOLERANCE TRANSMEMBRANE PROTEIN) K04744 lptD; LPS-assembly protein
D RCFBP_10707 putative lipoprotein; rlpB lipoprotein family K03643 lptE; LPS-assembly lipoprotein
D RCFBP_20953 corC; Magnesium and cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein
D RCFBP_10779 putative LrgA homolg; regulator of murein hydrolase activity K06518 cidA; holin-like protein
D RCFBP_11767 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D RCFBP_11766 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D RCFBP_11165 putative divalent heavy-metal cations transporter K16267 zipB; zinc and cadmium transporter
D RCFBP_11663 putative multidrug efflux transporter AcrB transmembrane domain K18303 mexK; multidrug efflux pump
D RCFBP_21437 acrB; component of acridine efflux pump, multidrug efflux system K18138 acrB; multidrug efflux pump
D RCFBP_10219 eamA; cysteine and O-acetyl-L-serine efflux system, DUF6 K15268 eamA; O-acetylserine/cysteine efflux transporter
D RCFBP_21304 transmembrane protein K15269 pecM; probable blue pigment (indigoidine) exporter
D RCFBP_10658 conserved membrane protein of unknown function, putative transporter K11939 rhtA; inner membrane transporter RhtA
D RCFBP_20904 putative permease, rarD-like K05786 rarD; chloramphenicol-sensitive protein RarD
D RCFBP_20500 putative glycolate/Lactate permease (LctP family) K03303 lutP; lactate permease
D RCFBP_11433 Putative Na+/solute symporter K14393 actP; cation/acetate symporter
D RCFBP_10204 dctA; citrate and C4-dicarboxylic acids transport protein, Sodium:dicarboxylate symporter (SDF) family K11103 dctA; aerobic C4-dicarboxylate transport protein
D RCFBP_21157 dctA; citrate and C4-dicarboxylic acids transport protein (DAACS family) K11103 dctA; aerobic C4-dicarboxylate transport protein
D RCFBP_10343 kefC; Glutathione-regulated potassium-efflux system antiporter K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D RCFBP_10342 kefF; Glutathione-regulated potassium-efflux system ancillary protein, quinone oxidoreductase flavoprotein K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D RCFBP_21074 Glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein K03455 KEA1_2_3; K+:H+ antiporter
D RCFBP_20661 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RCFBP_10995 putative chloride channel transmembrane protein, clcB-like K03281 clcA; chloride channel protein, CIC family
D RCFBP_20513 putative Chloride channel protein EriC, voltage gated (clcA) K03281 clcA; chloride channel protein, CIC family
D RCFBP_20501 Putative Chromate transporter K07240 chrA; chromate transporter
D RCFBP_20502 putative chromate transport protein (ChrA-like) K07240 chrA; chromate transporter
D RCFBP_21069 putative transport protein, Na/Pi cotransporter domain K03324 yjbB; phosphate:Na+ symporter
D RCFBP_10841 mviN; Virulence factor MVIN-like, inner membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D RCFBP_20392 putative permease transmembrane protein K13936 mdcF; malonate transporter and related proteins
D RCFBP_11628 trkD; potassium transporter K03549 kup; KUP system potassium uptake protein
D RCFBP_11361 L-lysine exporter (LysE family) K06895 lysE; L-lysine exporter family protein LysE/ArgO
D RCFBP_21257 putative (Homoserine/homoserine lactone) efflux transmembrane protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D RCFBP_11498 putative amino acid efflux protein, RhtB family K11250 leuE; leucine efflux protein
D RCFBP_20906 conserved membrane protein of unknown function, AzlC-like K26605 azlC; branched chain amino acid efflux pump
D RCFBP_20968 putative branched-chain amino acid permease; AzlC family K26605 azlC; branched chain amino acid efflux pump
D RCFBP_20969 conserved membrane protein of unknown function K26606 azlD; branched chain amino acid efflux pump
D RCFBP_20905 conserved membrane protein of unknown function K26606 azlD; branched chain amino acid efflux pump
D RCFBP_20628 conserved membrane protein of unknown function K07793 tctA; putative tricarboxylic transport membrane protein
D RCFBP_20627 conserved hypothetical protein; putative TRANSMEMBRANE PROTEIN K07794 tctB; putative tricarboxylic transport membrane protein
D RCFBP_20982 conserved membrane protein of unknown function K09125 yhhQ; queuosine precursor transporter
D RCFBP_10502 putative antibiotic resistance protein, MarC family K05595 marC; multiple antibiotic resistance protein
D RCFBP_10615 ftsW; essential cell division gene, stablilzes FtsZ ring, required for PBP2 expression K03588 ftsW; cell division protein FtsW
D RCFBP_11289 conserved membrane protein of unknown function, UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RCFBP_11422 tonB; TonB protein K03832 tonB; periplasmic protein TonB
D RCFBP_10683 putative tonB-related transmembrane protein K03832 tonB; periplasmic protein TonB
D RCFBP_20677 pal; Peptidoglycan-associated lipoprotein, protein pal, component of tol-pal system K03640 pal; peptidoglycan-associated lipoprotein
D RCFBP_20679 tolA; protein tolA, inner membrane/periplasmic component of the tol-pal system K03646 tolA; colicin import membrane protein
D RCFBP_20678 tolB; protein tolB, component of the tol-pal system K03641 tolB; TolB protein
D RCFBP_11827 mdcA; Malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D RCFBP_11829 mdcC; malonate decarboxylase, delta subunit K13931 mdcC; malonate decarboxylase delta subunit
D RCFBP_10724 putative multidrug resistance transport transmembrane protein K03543 emrA; membrane fusion protein, multidrug efflux system
D RCFBP_20134 emrA; Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D RCFBP_21436 acrA; component of acridine efflux pump, multidrug efflux system K03585 acrA; membrane fusion protein, multidrug efflux system
D RCFBP_21202 encAB; entericidin A membrane lipoprotein, antidote entericidin B K16348 ecnB; entericidin B
D RCFBP_11886 mgtC; Mg(2+) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D RCFBP_11278 putative transthyretin-like protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RCFBP_10382 conserved exported protein of unknown function K07274 mipA; MipA family protein
D RCFBP_11118 conserved exported protein of unknown function K07274 mipA; MipA family protein
C 02044 Secretion system [BR:rsc02044]
D RCFBP_20719 tolC; Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D RCFBP_10332 gspC; General Secretory Pathway protein C, type II secretion system K02452 gspC; general secretion pathway protein C
D RCFBP_10323 gspD; General Secretory Pathway protein D, type II secretion system K02453 gspD; general secretion pathway protein D
D RCFBP_10322 gspE; General Secretory Pathway protein E, type II secretion system K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RCFBP_10331 gspG; General Secretory Pathway protein G, type II secretion system K02456 gspG; general secretion pathway protein G
D RCFBP_10330 gspH; General Secretory Pathway protein H, type II secretion system K02457 gspH; general secretion pathway protein H
D RCFBP_10329 gspI; General Secretory Pathway protein I, type II secretion system K02458 gspI; general secretion pathway protein I
D RCFBP_10328 gspJ; General Secretory Pathway protein J, type II secretion system K02459 gspJ; general secretion pathway protein J
D RCFBP_10327 gspK; General Secretory Pathway protein K, type II secretion system K02460 gspK; general secretion pathway protein K
D RCFBP_10326 gspL; General Secretory Pathway protein L, type II secretion system K02461 gspL; general secretion pathway protein L
D RCFBP_10325 gspM; General Secretory Pathway protein M, type II secretion system K02462 gspM; general secretion pathway protein M
D RCFBP_10324 gspN; General Secretory Pathway protein N, type II secretion system K02463 gspN; general secretion pathway protein N
D RCFBP_10633 pilD; type 4 prepilin-like proteins leader peptide processing enzyme (Protein secretion protein XCPA) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase] K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RCFBP_20916 pilA; Type 4 fimbrial pilin signal peptide protein K02650 pilA; type IV pilus assembly protein PilA
D RCFBP_10635 pilB; Type IV pilus assembly protein K02652 pilB; type IV pilus assembly protein PilB
D RCFBP_10634 pilC; type IV pilus assembly transmembrane protein K02653 pilC; type IV pilus assembly protein PilC
D RCFBP_10767 Putative type 4 fimbrial biogenesis transmembrane protein (pilE) K02655 pilE; type IV pilus assembly protein PilE
D RCFBP_20690 Putative type IV pilus assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D RCFBP_20696 putative type IV pilus assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D RCFBP_20220 putative Type IV pilus biogenesis protein PilF; TPR repeat domain K02656 pilF; type IV pilus assembly protein PilF
D RCFBP_20747 pilG; Type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RCFBP_20746 pilH; Type IV pilus response regulator PilH, twitching motility K02658 pilH; twitching motility two-component system response regulator PilH
D RCFBP_20745 pilI; Type IV pilus signal transduction protein PilI, twitching motility K02659 pilI; twitching motility protein PilI
D RCFBP_20744 pilJ; Type IV pilus transmembrane protein PilJ, twitching motility, Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D RCFBP_10475 pilM; Fimbrial typa-4 assembly protein K02662 pilM; type IV pilus assembly protein PilM
D RCFBP_10476 pilN; Fimbrial type-4 assembly transmembrane protein K02663 pilN; type IV pilus assembly protein PilN
D RCFBP_10477 pilO; fimbrial type-4 assembly transmembrane protein K02664 pilO; type IV pilus assembly protein PilO
D RCFBP_10478 pilP; fimbrial type-4 assembly lipoprotein K02665 pilP; type IV pilus assembly protein PilP
D RCFBP_10479 pilQ; fimbrial type-4 assembly protein K02666 pilQ; type IV pilus assembly protein PilQ
D RCFBP_10765 pilT; Twitching mobility, Pilus retraction protein; GSP E family K02669 pilT; twitching motility protein PilT
D RCFBP_10766 pilU; type IV pilus twitching mobility protein,pilus retraction protein; GSP E family K02670 pilU; twitching motility protein PilU
D RCFBP_10770 putative type 4 fimbrial biogenesis pilv-related transmembrane protein K02671 pilV; type IV pilus assembly protein PilV
D RCFBP_20686 putative Type IV pilus assembly protein PilV K02671 pilV; type IV pilus assembly protein PilV
D RCFBP_10771 Putative type 4 fimbrial biogenesis pilw-related protein transmembrane precursor K02672 pilW; type IV pilus assembly protein PilW
D RCFBP_20687 putative type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D RCFBP_20693 putative type VI pilus assembly protein PilW precursor K02672 pilW; type IV pilus assembly protein PilW
D RCFBP_20688 Putative type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D RCFBP_10773 Putative type 4 fimbrial biogenesis pily1-related protein K02674 pilY1; type IV pilus assembly protein PilY1
D RCFBP_20689 Putative type IV pilus assembly protein, tip-associated adhesin PilY K02674 pilY1; type IV pilus assembly protein PilY1
D RCFBP_20695 putative Type IV pilus assembly protein, tip-associated adhesin PilY K02674 pilY1; type IV pilus assembly protein PilY1
D RCFBP_11791 pilZ; Type 4 pilus assembly protein K02676 pilZ; type IV pilus assembly protein PilZ
D RCFBP_10769 Putative type 4 fimbrial pilin related transmembrane protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RCFBP_20691 putative type IV pilus assembly protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D RCFBP_20697 Putative type IV pilus assembly protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D RCFBP_11400 conserved protein of unknown function, LysM domain K08086 fimV; pilus assembly protein FimV
D RCFBP_20757 putative prepilin peptidase transmembrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RCFBP_20758 Putative pilus assembly (cpaB), transmembrane protein K02279 cpaB; pilus assembly protein CpaB
D RCFBP_20759 cpaC; pilus assembly secretion protein K02280 cpaC; pilus assembly protein CpaC
D RCFBP_20761 tadZ; Flp pilus assembly protein, ATPase K02282 cpaE; pilus assembly protein CpaE
D RCFBP_20762 tadA; Tad secretion sytem protein, secretion ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RCFBP_20763 tadB; Tad secretion system, pilus assembly protein K12510 tadB; tight adherence protein B
D RCFBP_20764 tadC; Tad secretion system, secretion accessory protein K12511 tadC; tight adherence protein C
D RCFBP_20755 putative pilin transmembrane protein K02651 flp; pilus assembly protein Flp/PilA
D RCFBP_20756 putative pilin transmembrane protein K02651 flp; pilus assembly protein Flp/PilA
D RCFBP_20565 conserved exported protein of unknown function K02237 comEA; competence protein ComEA
D RCFBP_20314 conserved membrane protein of unknown function, ComEC/Rec2 domain K02238 comEC; competence protein ComEC
D RCFBP_10564 putative thiol:disulphide interchange protein (DsbC-like) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RCFBP_10175 conserved protein of unknown function, Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RCFBP_10626 secA; preprotein translocase, ATPase secretion component (General Secretory Pathway) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RCFBP_21131 secB; molecular chaperone in protein export, enhances activity of SecA (General Secretory Pathway) K03071 secB; preprotein translocase subunit SecB
D RCFBP_10735 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D RCFBP_10408 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D RCFBP_10734 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D RCFBP_11325 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D RCFBP_10451 secY; preprotein translocase, membrane component, transport across inner membrane (General Secretory Pathway) K03076 secY; preprotein translocase subunit SecY
D RCFBP_10649 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RCFBP_21102 ftsY; Signal recognition particle (SRP) GTPase K03110 ftsY; fused signal recognition particle receptor
D RCFBP_10736 yajC; protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D RCFBP_21448 yidC; cytoplasmic insertase, essential for proper integration of ATPase into the membrane K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RCFBP_10509 tatA; Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D RCFBP_10510 tatB; Sec-independent protein translocase protein tatB homolog K03117 tatB; sec-independent protein translocase protein TatB
D RCFBP_10511 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rsc02042]
D RCFBP_11816 Putative phage assembly protein K10954 zot; zona occludens toxin
D RCFBP_10636 putative cbs (Cystathionine-beta-synthase) domain harboring transporter transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RCFBP_11122 conserved membrane protein of unknown function, DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rsc02022]
D RCFBP_11514 phoR; sensor histidine kinase in two-component regulatory system with phoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RCFBP_11513 phoB; DNA-binding response regulator in two-component regulatory system with phoR K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RCFBP_21428 phoB; DNA-binding response regulator in two-component regulatory system with PhoR K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RCFBP_20402 putative two-component system response, response regulator receiver, transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RCFBP_11656 envZ; sensory histidine kinase in two-component regulatory system with OmpR, regulates ompF and ompC expression, senses osmolarity (OmpR family) K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RCFBP_11657 ompR; response regulator in two-component regulatory system with EnvZ, regulates ompF and ompC expression (OmpR family) K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RCFBP_10080 kdpD; sensor histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RCFBP_10352 kdpE; response regulator (OmpR family) in two-component regulatory system with KdpD, regulation of potassium translocation K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RCFBP_10071 putative sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_10106 putative sensor hybrid histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_11747 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_10515 Sensor protein, histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RCFBP_11748 putative response regulator, CheY family K07774 tctD; two-component system, OmpR family, response regulator TctD
D RCFBP_10516 putative response regulator, CheY family K07774 tctD; two-component system, OmpR family, response regulator TctD
D RCFBP_20925 putative response regulator, CheY family K07774 tctD; two-component system, OmpR family, response regulator TctD
D RCFBP_10072 putative response regulator, CheY family K07774 tctD; two-component system, OmpR family, response regulator TctD
D RCFBP_10384 Histidine kinase, sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RCFBP_10061 qseC; sensory histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RCFBP_10060 qseB; Transcriptional regulatory protein K02483 K02483; two-component system, OmpR family, response regulator
D RCFBP_10383 Transcriptional regulatory protein K02483 K02483; two-component system, OmpR family, response regulator
D RCFBP_10107 putative response regulator, CheY family K02483 K02483; two-component system, OmpR family, response regulator
D RCFBP_21201 putative response regulator, CheY family K02483 K02483; two-component system, OmpR family, response regulator
D RCFBP_10077 putative response regulator receiver K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D RCFBP_10370 putative two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D RCFBP_21424 putative sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D RCFBP_20168 ntrB; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RCFBP_20167 ntrC; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RCFBP_21367 putative SENSOR HISTIDINE KINASE K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RCFBP_21366 putative response regulator (containing CheY-like receiver) K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RCFBP_10652 pehS; sensor histidine kinase transcription regulator K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RCFBP_10653 pehR; response regulator receiver, FIS type, sigma 54 interacting region K02667 pilR; two-component system, NtrC family, response regulator PilR
D RCFBP_21156 dctB; sensor histidine kinase, transcriptional regulator of C4-dicarboxylate transport K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RCFBP_21155 dctD; transcriptional response regulator, C4-dicarboxylate transport response regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D RCFBP_20743 putative composite protein : Response regulator receiver of two component system system (sensor histidine kinase and response regulator)/transcription regulator, similiraty with pilL protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RCFBP_20747 pilG; Type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RCFBP_20746 pilH; Type IV pilus response regulator PilH, twitching motility K02658 pilH; twitching motility two-component system response regulator PilH
D RCFBP_10532 Sensor protein, Histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RCFBP_21406 putative sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RCFBP_21405 putative response regulator/transcriptional regulator, RegA/PrrA/ActR family (CheY-like receiver domain + Fis-type HTH domain) K15012 regA; two-component system, response regulator RegA
D RCFBP_10714 phcS; Sensor protein histidine kinase, repressor of PhcA K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
D RCFBP_10713 phcR; Sensor protein; repressor of PhcA K19622 phcR; two-component system, response regulator PhcR
D RCFBP_10712 phcQ; Response regulator receiver, CheY family; belongs to the pheBSRQ operon that regulates phcA K19623 phcQ; two-component system, probable response regulator PhcQ
D RCFBP_21105 nasR; response regulator antiterminator transcriptional regulator, RNA-binding ANTAR domain K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:rsc02035]
D RCFBP_10299 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_10661 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_10160 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20866 putative methyl-accepting chemotaxis protein transmembrane receptor K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20277 methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_20278 methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11434 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11438 Methyl-accepting chemotaxis sensory transducer precursor K03406 mcp; methyl-accepting chemotaxis protein
D RCFBP_11887 methyl-accepting chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D RCFBP_10559 putative type III effector protein K02423 fliT; flagellar protein FliT
D RCFBP_20747 pilG; Type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RCFBP_20746 pilH; Type IV pilus response regulator PilH, twitching motility K02658 pilH; twitching motility two-component system response regulator PilH
D RCFBP_20745 pilI; Type IV pilus signal transduction protein PilI, twitching motility K02659 pilI; twitching motility protein PilI
D RCFBP_20744 pilJ; Type IV pilus transmembrane protein PilJ, twitching motility, Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D RCFBP_20743 putative composite protein : Response regulator receiver of two component system system (sensor histidine kinase and response regulator)/transcription regulator, similiraty with pilL protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RCFBP_10653 pehR; response regulator receiver, FIS type, sigma 54 interacting region K02667 pilR; two-component system, NtrC family, response regulator PilR
D RCFBP_10652 pehS; sensor histidine kinase transcription regulator K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RCFBP_10765 pilT; Twitching mobility, Pilus retraction protein; GSP E family K02669 pilT; twitching motility protein PilT
D RCFBP_10766 pilU; type IV pilus twitching mobility protein,pilus retraction protein; GSP E family K02670 pilU; twitching motility protein PilU
D RCFBP_20916 pilA; Type 4 fimbrial pilin signal peptide protein K02650 pilA; type IV pilus assembly protein PilA
D RCFBP_10635 pilB; Type IV pilus assembly protein K02652 pilB; type IV pilus assembly protein PilB
D RCFBP_10634 pilC; type IV pilus assembly transmembrane protein K02653 pilC; type IV pilus assembly protein PilC
D RCFBP_10633 pilD; type 4 prepilin-like proteins leader peptide processing enzyme (Protein secretion protein XCPA) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase] K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RCFBP_20220 putative Type IV pilus biogenesis protein PilF; TPR repeat domain K02656 pilF; type IV pilus assembly protein PilF
D RCFBP_10479 pilQ; fimbrial type-4 assembly protein K02666 pilQ; type IV pilus assembly protein PilQ
D RCFBP_10478 pilP; fimbrial type-4 assembly lipoprotein K02665 pilP; type IV pilus assembly protein PilP
D RCFBP_10477 pilO; fimbrial type-4 assembly transmembrane protein K02664 pilO; type IV pilus assembly protein PilO
D RCFBP_10476 pilN; Fimbrial type-4 assembly transmembrane protein K02663 pilN; type IV pilus assembly protein PilN
D RCFBP_10475 pilM; Fimbrial typa-4 assembly protein K02662 pilM; type IV pilus assembly protein PilM
D RCFBP_11791 pilZ; Type 4 pilus assembly protein K02676 pilZ; type IV pilus assembly protein PilZ
D RCFBP_10770 putative type 4 fimbrial biogenesis pilv-related transmembrane protein K02671 pilV; type IV pilus assembly protein PilV
D RCFBP_20686 putative Type IV pilus assembly protein PilV K02671 pilV; type IV pilus assembly protein PilV
D RCFBP_10771 Putative type 4 fimbrial biogenesis pilw-related protein transmembrane precursor K02672 pilW; type IV pilus assembly protein PilW
D RCFBP_20687 putative type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D RCFBP_20693 putative type VI pilus assembly protein PilW precursor K02672 pilW; type IV pilus assembly protein PilW
D RCFBP_20688 Putative type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D RCFBP_10773 Putative type 4 fimbrial biogenesis pily1-related protein K02674 pilY1; type IV pilus assembly protein PilY1
D RCFBP_20689 Putative type IV pilus assembly protein, tip-associated adhesin PilY K02674 pilY1; type IV pilus assembly protein PilY1
D RCFBP_20695 putative Type IV pilus assembly protein, tip-associated adhesin PilY K02674 pilY1; type IV pilus assembly protein PilY1
D RCFBP_10767 Putative type 4 fimbrial biogenesis transmembrane protein (pilE) K02655 pilE; type IV pilus assembly protein PilE
D RCFBP_20690 Putative type IV pilus assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D RCFBP_20696 putative type IV pilus assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D RCFBP_20755 putative pilin transmembrane protein K02651 flp; pilus assembly protein Flp/PilA
D RCFBP_20756 putative pilin transmembrane protein K02651 flp; pilus assembly protein Flp/PilA
D RCFBP_20757 putative prepilin peptidase transmembrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RCFBP_20758 Putative pilus assembly (cpaB), transmembrane protein K02279 cpaB; pilus assembly protein CpaB
D RCFBP_20759 cpaC; pilus assembly secretion protein K02280 cpaC; pilus assembly protein CpaC
D RCFBP_20761 tadZ; Flp pilus assembly protein, ATPase K02282 cpaE; pilus assembly protein CpaE
D RCFBP_20762 tadA; Tad secretion sytem protein, secretion ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rsc04812]
D RCFBP_21385 mreB; actin-like component MreB (cell wall structural complex MreBCD, DNA segregation) K03569 mreB; rod shape-determining protein MreB and related proteins
D RCFBP_10621 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D RCFBP_10620 ftsA; Cell division protein ftsA, with ATPase domain, involved in recruitment of FtsK to Z ring K03590 ftsA; cell division protein FtsA
D RCFBP_10099 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D RCFBP_10098 minD; Septum site-determining protein minD (Cell division inhibitor minD) K03609 minD; septum site-determining protein MinD
D RCFBP_10097 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D RCFBP_10140 parA; chromosome partitioning protein ParB K03496 parA; chromosome partitioning protein
D RCFBP_11033 conserved protein of unknown function, Cobyrinic acid a,c-diamide synthase domain K03496 parA; chromosome partitioning protein
D RCFBP_10141 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rsc04147]
D RCFBP_20488 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D RCFBP_20305 eno; enolase, phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RCFBP_10700 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RCFBP_20903 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RCFBP_10194 ttuE; Pyruvate kinase; tartrate degradation K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RCFBP_20902 pykA; pyruvate kinase II, glucose-stimulated K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RCFBP_20268 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RCFBP_20781 groL; chaperone Hsp60 (GroEL), part of GroE chaperone system K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RCFBP_10812 dnaK; Chaperone protein dnaK (Heat shock protein 70) K04043 dnaK; molecular chaperone DnaK
D RCFBP_11677 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RCFBP_20004 guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RCFBP_10428 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RCFBP_10407 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RCFBP_10859 conserved membrane protein of unknown function, Predicted Na+ dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RCFBP_10602 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_21380 putative long-chain-fatty-acid--coa ligase protein (fadD2) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RCFBP_11770 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11640 phaA; Acetyl-CoA acetyltransferase (beta-ketothiolase) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_11645 phaA; acetyl-CoA acetyltransferase, thiolase-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21217 putative acetyl-CoA acetyltransferase with thiolase domain K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RCFBP_21350 ahcY; Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RCFBP_10862 adk; Adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D RCFBP_21071 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RCFBP_11067 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RCFBP_10845 argG; Argininosuccinate synthase (Citrulline--aspartate ligase) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RCFBP_11268 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RCFBP_10393 glpK; Glycerol kinase (ATP:glycerol 3-phosphotransferase) K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RCFBP_10461 hemB; 5-aminolevulinate dehydratase (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RCFBP_10334 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RCFBP_10109 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RCFBP_21348 putative alkaline phosphatase signal peptide protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_21349 secreted alkaline phosphatase lipoprotein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_21431 serA; D-3-phosphoglycerate dehydrogenase / D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RCFBP_20977 purH; bifunctional: IMP cyclohydrolase (N-terminal); phosphoribosylaminoimidazolecarboxamide formyltransferase (C-terminal) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RCFBP_20527 metalloprotease; endopeptidase M48, Ste24p family K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RCFBP_11609 pdhL; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20156 lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RCFBP_20557 etfA; Electron transfer flavoprotein, alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RCFBP_21004 gdhA; glutamate dehydrogenase, NADP-specific, oxidoreductase protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RCFBP_11324 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RCFBP_21134 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rsc02048]
D RCFBP_11063 conserved protein of unknown function K15342 cas1; CRISP-associated protein Cas1
D RCFBP_11064 conserved protein of unknown function K09951 cas2; CRISPR-associated protein Cas2
D RCFBP_11057 putative CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RCFBP_11058 putative CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D RCFBP_11059 putative CRISPR-associated protein Cse2 K19046 casB; CRISPR system Cascade subunit CasB
D RCFBP_11060 putative CRISPR-associated protein, CT1975 K19124 casC; CRISPR system Cascade subunit CasC
D RCFBP_11061 CRISPR-associated protein, Cas5e-type K19125 casD; CRISPR system Cascade subunit CasD
D RCFBP_11062 conserved protein of unknown function, CRISPR-associated protein domain K19126 casE; CRISPR system Cascade subunit CasE
D RCFBP_10070 putative restriction endonuclease, type I, R subunit (hsdR) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RCFBP_10068 putative typeI restriction enzyme (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RCFBP_11404 Site-specific DNA-methyltransferase (adenine-specific) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RCFBP_10010 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_20378 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RCFBP_20357 putative phage endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D RCFBP_10038 putative endonuclease K07448 mrr; restriction system protein
D RCFBP_10044 putative endonuclease K07448 mrr; restriction system protein
D RCFBP_11901 hipA; transcriptional repressor which interacts with HipB K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RCFBP_11900 putative transcription regulator protein (hipB) K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RCFBP_10621 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D RCFBP_21385 mreB; actin-like component MreB (cell wall structural complex MreBCD, DNA segregation) K03569 mreB; rod shape-determining protein MreB and related proteins
D RCFBP_20503 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RCFBP_20505 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RCFBP_20254 gltX; glutamate tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RCFBP_11393 conserved protein of unknown function, DUF339 K09159 cptB; antitoxin CptB
D RCFBP_20461 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RCFBP_10015 conserved protein of unknown function K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rsc04090]
C 01504 Antimicrobial resistance genes [BR:rsc01504]
D RCFBP_10272 putative hydrolase protein K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D RCFBP_21436 acrA; component of acridine efflux pump, multidrug efflux system K03585 acrA; membrane fusion protein, multidrug efflux system
D RCFBP_21437 acrB; component of acridine efflux pump, multidrug efflux system K18138 acrB; multidrug efflux pump
D RCFBP_21438 putative outer membrane protein (Probable drug efflux lipoprotein) K18139 oprM; outer membrane protein, multidrug efflux system
D RCFBP_11663 putative multidrug efflux transporter AcrB transmembrane domain K18303 mexK; multidrug efflux pump
D RCFBP_10118 hmrR; Heavy metal-dependent transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RCFBP_20719 tolC; Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:rsc00536]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rsc00537]
D RCFBP_21348 putative alkaline phosphatase signal peptide protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RCFBP_21349 secreted alkaline phosphatase lipoprotein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rsc03100]
D RCFBP_tRNA37 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA40 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA10 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RCFBP_tRNA47 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RCFBP_tRNA53 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RCFBP_tRNA26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RCFBP_tRNA49 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RCFBP_tRNA23 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RCFBP_tRNA21 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RCFBP_tRNA42 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RCFBP_tRNA39 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RCFBP_tRNA35 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RCFBP_tRNA27 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RCFBP_tRNA30 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RCFBP_tRNA38 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RCFBP_tRNA41 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RCFBP_tRNA5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RCFBP_tRNA28 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RCFBP_tRNA33 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RCFBP_tRNA34 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RCFBP_tRNA43 tRNA-His K14226 tRNA-His; tRNA His
D RCFBP_tRNA2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RCFBP_tRNA44 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RCFBP_tRNA9 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RCFBP_tRNA13 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA51 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA24 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA22 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RCFBP_tRNA25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RCFBP_tRNA32 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RCFBP_tRNA12 tRNA-Met K14230 tRNA-Met; tRNA Met
D RCFBP_tRNA29 tRNA-Met K14230 tRNA-Met; tRNA Met
D RCFBP_tRNA46 tRNA-Met K14230 tRNA-Met; tRNA Met
D RCFBP_tRNA31 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RCFBP_tRNA52 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RCFBP_tRNA16 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RCFBP_tRNA18 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RCFBP_tRNA36 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RCFBP_tRNA11 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RCFBP_tRNA50 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RCFBP_tRNA14 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RCFBP_tRNA6 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RCFBP_tRNA48 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RCFBP_tRNA8 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RCFBP_tRNA7 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RCFBP_tRNA4 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RCFBP_tRNA15 tRNA-Val K14237 tRNA-Val; tRNA Val
D RCFBP_tRNA17 tRNA-Val K14237 tRNA-Val; tRNA Val
D RCFBP_tRNA20 tRNA-Val K14237 tRNA-Val; tRNA Val
D RCFBP_16s_rRNA_1 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_16s_rRNA_2 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_16s_rRNA_3 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RCFBP_23s_rRNA_1 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RCFBP_23s_rRNA_2 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RCFBP_23s_rRNA_3 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RCFBP_5s_rRNA_1 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RCFBP_5s_rRNA_3 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RCFBP_5s_rRNA_2 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RCFBP_misc_RNA_10 SRP_bact K01983 ffs; SRP RNA
D RCFBP_misc_RNA_2 RNaseP_bact_a K01978 rnpB; M1 RNA
D RCFBP_misc_RNA_8 tmRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RCFBP_20451 putative short-chain alcohol dehydrogenase oxidoreductase protein K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D RCFBP_20279 dkgB; 2,5-diketo-D-gluconic acid reductase B (2,5-DKG reductase B) (2,5-DKGR B) (25DKGR-B) (AKR5D) K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D RCFBP_21395 putative FAD linked oxidase oxidoreductase protein K26080 E1.1.3.29; N-acylhexosamine oxidase [EC:1.1.3.29]
D RCFBP_11878 coxS; Carbon monoxide dehydrogenase small chain (CO dehydrogenase subunit S) (CO-DH S) K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RCFBP_11880 coxM; Carbon monoxide dehydrogenase medium chain (CO dehydrogenase subunit M) (CO-DH M) K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RCFBP_11879 coxL; Carbon monoxide dehydrogenase large chain (CO dehydrogenase subunit L) (CO-DH L) K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RCFBP_10315 putative Indolepyruvate ferredoxin oxidoreductase (iorA) K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RCFBP_11775 putative NADP-dependent Zn-binding oxidoreductases K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D RCFBP_11442 iorA; isoquinoline 1-oxidoreductase (alpha subunit) K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RCFBP_11443 iorB; isoquinoline 1-oxidoreductase (Beta subunit) K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RCFBP_20774 exported protein of unknown function K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RCFBP_20776 putative dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RCFBP_11563 etfD; Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RCFBP_20945 putative nad/fad-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D RCFBP_11212 qor; quinone oxidoreductase, NADPH-dependent K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RCFBP_20230 putative quinone oxidoreductase (Cryz), zinc-binding K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RCFBP_11323 putative NADPH:quinone reductase (Cryz) K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RCFBP_20651 msrA; Protein-methionine-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RCFBP_11756 msrB; methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RCFBP_11364 Glutathione S-transferase with thioredoxin-like domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RCFBP_10469 putative exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RCFBP_20109 bcp; peroxiredoxin; thioredoxin reductase (Bacterioferritin comigratory protein homolog) K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RCFBP_10671 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RCFBP_20662 putative peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RCFBP_11654 putative Alkylhydroperoxidase ahpD, antioxidant oxidoreductase (ahpD) K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D RCFBP_11655 ahpC; Peroxiredoxin, Antioxidant oxidoreductase K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D RCFBP_11186 putative pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RCFBP_20935 Conserved pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RCFBP_10066 hmp; Flavohemoprotein, Nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D RCFBP_20121 fpr; Ferredoxin--NADP reductase (FNR) (Protein X) K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RCFBP_10209 arsC; arsenate reductase with thioredoxin-like domain K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RCFBP_11280 Dehydrogenase protein DltE K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D RCFBP_20717 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RCFBP_20228 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RCFBP_20649 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RCFBP_11835 putative malonate decarboxylase, epsilon subunit (acyl carrier transferase) (mdcH) K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D RCFBP_20954 cutE; apolipoprotein N-acyltransferase, copper homeostasis protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RCFBP_10304 putative antibiotic resistance protein (Acetyltransferase) K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D RCFBP_11624 aat; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RCFBP_11623 Arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RCFBP_11828 mdcB; 2'-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-Asynthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D RCFBP_11016 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RCFBP_20853 putative ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RCFBP_20013 Putative phosphotransferase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RCFBP_10791 glnE; Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RCFBP_11834 putative Malonate decarboxylase subunit (mdcG) K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D RCFBP_11757 conserved protein of unknown function, UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RCFBP_21215 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D RCFBP_21083 hprK; HPr serine kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RCFBP_20236 frc; Formyl-coenzyme A transferase (Formyl-CoA transferase) K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D RCFBP_21153 conserved protein of unknown function, UPF0189 family doamin K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RCFBP_11614 putative Thioesterase/thiol ester dehydrase-isomerase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RCFBP_11782 putative Acyl-CoA thioester hydrolase (ybgC) K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RCFBP_20682 ybgC; acyl-CoA thioesterase, associated to Tol-Pal complex K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RCFBP_20294 conserved protein of unknown function, PHP domain-like K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RCFBP_11518 putative phosphohistidine phosphatase (sixA) K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RCFBP_20881 putative metal-dependent phosphohydrolase (HD region) K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RCFBP_10883 putative metal-dependent phosphohydrolase, HD region K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RCFBP_11792 putative metallo-dependent hydrolase; TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RCFBP_20315 putative DNAse, hydrolase with metallo-dependent hydrolase domain K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RCFBP_11765 pehB; Exo-poly-galacturonosidase signal peptide protein K18650 pehX; exo-poly-alpha-galacturonosidase [EC:3.2.1.82]
D RCFBP_20034 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RCFBP_21374 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RCFBP_21056 putative polysaccharide deacetylase transmembrane protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RCFBP_10789 putative Nitrilase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RCFBP_10571 putative adenylate cyclase protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D RCFBP_20434 maf; Septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D RCFBP_20085 conserved protein of unknown function, Alpha/Beta hydrolase family, DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RCFBP_11830 mdcD; malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D RCFBP_11831 mdcE; Malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D RCFBP_11678 putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RCFBP_10746 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D RCFBP_20181 putative isomerase/epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D RCFBP_21426 hyi; hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D RCFBP_21252 METHYLMALONYL-COA MUTASE K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D RCFBP_10679 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (Murein peptide ligase) K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D RCFBP_21261 rtcA; RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D RCFBP_20473 rsxB; 4Fe-4S ferredoxin, iron-sulphur binding K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RCFBP_20153 ccoI; Copper-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D RCFBP_11618 putative oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RCFBP_11619 putative oxido reductase, 4Fe-4S ferredoxin, iron-sulfur binding K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RCFBP_20448 conserved protein of unknown function K00782 lldG; L-lactate dehydrogenase complex protein LldG
D RCFBP_20597 putative endoglucanase c-terminal domain harboring protein K20628 exlX; expansin
C 99982 Energy metabolism
D RCFBP_11054 putative formate dehydrogenase accessory protein (fdhD) K02379 fdhD; FdhD protein
D RCFBP_20455 fdx; Fe-S clusters assembly [2FE-2S] ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D RCFBP_20320 Ferredoxin (fdxA) K05524 fdxA; ferredoxin
D RCFBP_20460 iscU; FeS cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D RCFBP_20558 etfB; Electron transfer flavoprotein, beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D RCFBP_21331 aidB; isovaleryl CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RCFBP_10764 conserved protein of unknown function, Predicted pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D RCFBP_20483 putative Acetyltransferase/N-acetylase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D RCFBP_20570 conserved exported protein of unknown function K08992 lapA; lipopolysaccharide assembly protein A
D RCFBP_20569 conserved protein of unknown function, TPR repeat K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D RCFBP_11076 putative protoheme IX synthesis protein (hemY) K02498 hemY; HemY protein
D RCFBP_21023 ubiB; 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway K03688 ubiB; ubiquinone biosynthesis protein
D RCFBP_21024 conserved protein of unknown function K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D RCFBP_21147 conserved protein of unknown function K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D RCFBP_20895 mobB; Molybdopetrin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D RCFBP_10900 conserved membrane protein of unknown function K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RCFBP_10917 cspD; Cold shock-like protein CspD (CSP-D) K03704 cspA; cold shock protein
D RCFBP_21145 glnB; Nitrogen regulatory protein PII-2 K04752 glnK; nitrogen regulatory protein P-II 2
D RCFBP_11631 tex; transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D RCFBP_10918 clpS; ATP-dependent Clp protease adapter protein clpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RCFBP_11667 tig; peptidyl-prolyl cis/trans isomerase (trigger factor), molecular chaperone involved in cell division K03545 tig; trigger factor
D RCFBP_10470 conserved membrane protein of unknown function, Ferric reductase-like domain K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RCFBP_11357 ureE; Urease accessory protein K03187 ureE; urease accessory protein
D RCFBP_11358 ureF; Urease accessory protein K03188 ureF; urease accessory protein
D RCFBP_11359 ureG; Urease accessory protein K03189 ureG; urease accessory protein
D RCFBP_11352 ureD; Urease accessory protein K03190 ureD; urease accessory protein
D RCFBP_11354 ureJ; Urease accessory transmembrane protein K03192 ureJ; urease accessory protein
D RCFBP_20009 smpB; RNA-binding protein, component of the SsrA quality-control system K03664 smpB; SsrA-binding protein
D RCFBP_21149 putative ATPase, Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D RCFBP_20310 conserved protein of unknown function K07395 K07395; putative proteasome-type protease
D RCFBP_11905 conserved protein of unknown function, Thioredoxin-like K07396 K07396; putative protein-disulfide isomerase
D RCFBP_20641 conserved protein of unknown function K07396 K07396; putative protein-disulfide isomerase
D RCFBP_21111 conserved protein of unknown function, OsmC-like domain K07397 yhfA; putative redox protein
D RCFBP_20993 conserved protein of unknown function; Predicted redox protein, regulator of disulfide bond formation; osmC-like motif K07397 yhfA; putative redox protein
D RCFBP_10464 putative cytochrome C biogenesis transmembrane protein, ResB-like family K07399 resB; cytochrome c biogenesis protein
D RCFBP_11292 xdhC; xanthine dehydrogenase, maturation factor K07402 xdhC; xanthine dehydrogenase accessory factor
D RCFBP_11884 coxI; carbon monoxide dehydrogenase accessory protein K07402 xdhC; xanthine dehydrogenase accessory factor
D RCFBP_20612 putative membrane bound peptidase; NefD homolog K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D RCFBP_10982 radC; DNA repair protein radC homolog, associated with replication fork K03630 radC; DNA repair protein RadC
D RCFBP_20445 rmuC; DNA recombination protein, rmuC family; exported protein K09760 rmuC; DNA recombination protein RmuC
D RCFBP_10215 conserved protein of unknown function K07460 yraN; putative endonuclease
D RCFBP_21376 putative smf, DNA processing chain A (drpA) K04096 smf; DNA processing protein
D RCFBP_11095 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D RCFBP_11588 Resolvase, N-:Resolvase helix-turn-helix region K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D RCFBP_11467 Putative DNA primase-related protein K06919 K06919; putative DNA primase/helicase
D RCFBP_11105 insC; transposase (ORFA protein) K07483 K07483; transposase
D RCFBP_20550 insC; transposase; IS2 insertion element repressor K07483 K07483; transposase
D RCFBP_10484 Putative transposase and inactivated derivatives protein K07491 rayT; REP-associated tyrosine transposase
D RCFBP_11130 transposase (fragment) K07493 K07493; putative transposase
D RCFBP_11132 transposase (fragment) K07493 K07493; putative transposase
D RCFBP_11589 Transposase of insertion sequence ISRta2, IS256 family K07493 K07493; putative transposase
D RCFBP_21270 tnpA; transposase, IS256 family K07493 K07493; putative transposase
D RCFBP_20548 Transposase of insertion sequence ISRta2, IS256 family K07493 K07493; putative transposase
D RCFBP_10042 transposase K07493 K07493; putative transposase
D RCFBP_10365 ISRSO14-transposase ORFA protein K07497 K07497; putative transposase
D RCFBP_10016 transposase K07497 K07497; putative transposase
D RCFBP_10017 Integrase, catalytic region K07497 K07497; putative transposase
D RCFBP_10007 lcrS; Transposase K07497 K07497; putative transposase
D RCFBP_10364 putative ISRSO14-transposase orfB protein K07497 K07497; putative transposase
D RCFBP_20817 protein of unknown function K07497 K07497; putative transposase
D RCFBP_20544 ISRSO14-transposase ORFA protein K07497 K07497; putative transposase
D RCFBP_21244 ISRSO14-transposase ORFA protein K07497 K07497; putative transposase
D RCFBP_11107 lcrS; Transposase K07497 K07497; putative transposase
D RCFBP_10006 transposase K07497 K07497; putative transposase
D RCFBP_10008 transposase; integrase, catalytic region (tISRso16b) K07497 K07497; putative transposase
D RCFBP_11910 conserved protein of unknown function K07497 K07497; putative transposase
D RCFBP_11104 insD; IS2 insertion element transposase InsAB'; CP4-44 prophage K07497 K07497; putative transposase
D RCFBP_21243 putative ISRSO14-transposase orfB protein K07497 K07497; putative transposase
D RCFBP_20543 putative ISRSO14-transposase orfB protein K07497 K07497; putative transposase
D RCFBP_20551 insD; IS2 insertion element transposase InsAB'; CP4-44 prophage K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RCFBP_20241 conserved protein of unknown function K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RCFBP_11595 Cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RCFBP_20113 pit; phosphate transporter, low-affinity K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RCFBP_21021 putative SODIUM/SOLUTE SYMPORTER K03307 TC.SSS; solute:Na+ symporter, SSS family
D RCFBP_20200 putative permease transmembrane protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D RCFBP_11755 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D RCFBP_10234 putative site-specific integrase protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
D RCFBP_21353 conserved protein of unknown function (TfoX N-terminal domain) K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D RCFBP_21423 cstA; carbon starvation protein K06200 cstA; carbon starvation protein
D RCFBP_20130 typA; Translational regulator, GTP-binding protein K06207 typA; GTP-binding protein
D RCFBP_21323 conserved protein of unknown function (cystathionine-beta-synthase-CBS domain) K07168 K07168; CBS domain-containing membrane protein
D RCFBP_20948 ybeZ; phosphate starvation-inducible ATPase, PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RCFBP_20110 Phosphate starvation-inducible protein PhoH-like K07175 phoH2; PhoH-like ATPase
D RCFBP_10849 putative nucleotide binding protein (UPF0234 protein) K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RCFBP_11092 lolA; Outer-membrane lipoprotein carrier protein precursor K03634 lolA; outer membrane lipoprotein carrier protein
D RCFBP_21091 lolB; Outer-membrane lipoprotein lolB precursor K02494 lolB; outer membrane lipoprotein LolB
D RCFBP_10491 putative vacJ-like lipoprotein; transmembrane K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RCFBP_10669 putative lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D RCFBP_20582 putative outer-membrane lipoprotein transmembrane K06077 slyB; outer membrane lipoprotein SlyB
D RCFBP_20020 skp; periplasmic molecular chaperone for outer membrane proteins K06142 hlpA; outer membrane protein
D RCFBP_20227 putative outer membrane metallopeptidase lipoprotein nlpD/ K06194 nlpD; lipoprotein NlpD
D RCFBP_10115 putative Outer membrane protein, OmpW family K07275 ompW; outer membrane protein
D RCFBP_10483 putative outer membrane protein W precursor (ompW) K07275 ompW; outer membrane protein
D RCFBP_20944 putative outer membrane protein, OmpW family K07275 ompW; outer membrane protein
D RCFBP_20645 putative outer membrane biogenesis protein, AsmA family K07290 yhjG; AsmA family protein
D RCFBP_21291 putative secretion protein hlyd-related protein K01993 ABC-2.TX; HlyD family secretion protein
D RCFBP_11413 putative osmotically inducible lipoprotein b1 transmembrane (osmB) K04062 osmB; osmotically inducible lipoprotein OsmB
D RCFBP_20219 putative transcription regulator, Lambda repressor-like K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D RCFBP_11512 phoU; negative regulator of PhoR/PhoB two-component regulator K02039 phoU; phosphate transport system protein
D RCFBP_21138 bfd; bacterioferritin-associated ferredoxin protein K02192 bfd; bacterioferritin-associated ferredoxin
D RCFBP_10390 opgD; Glucans biosynthesis protein D 1 precursor K03670 mdoG; periplasmic glucans biosynthesis protein
D RCFBP_10548 opgG; Glucans biosynthesis protein G precursor K03670 mdoG; periplasmic glucans biosynthesis protein
D RCFBP_10459 cutA; Divalent-cation tolerance protein cutA K03926 cutA; periplasmic divalent cation tolerance protein
D RCFBP_10579 putative apaG protein associated with Co2+ and Mg2+ efflux K06195 apaG; ApaG protein
D RCFBP_10473 cyaY; frataxin, iron-binding and oxidizing protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D RCFBP_20642 putative hemerythrin-like protein, metal-binding K07216 hr; hemerythrin
D RCFBP_11297 putative transcriptional regulator, LysR family K07219 K07219; putative molybdopterin biosynthesis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RCFBP_11409 cvpA; membrane protein required for colicin V production K03558 cvpA; membrane protein required for colicin V production
D RCFBP_11538 putative paraquat-inducible protein B (pqiB) K06192 pqiB; paraquat-inducible protein B
D RCFBP_10836 putative paraquat-inducible protein B (pqiB) K06192 pqiB; paraquat-inducible protein B
D RCFBP_20872 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D RCFBP_11299 putative oxygen-binding heme protein K06886 glbN; hemoglobin
D RCFBP_10847 putative predicted esterase of the alpha-beta hydrolase superfamily protein. Patatin-like phospholipase domain K07001 K07001; NTE family protein
D RCFBP_21266 patatin-like phospholipase K07001 K07001; NTE family protein
D RCFBP_21185 conserved exported protein of unknown function K07001 K07001; NTE family protein
D RCFBP_20255 putative lipoprotein, esterase of the alpha-beta hydrolase superfamily, Patatin-like phospholipase domain K07001 K07001; NTE family protein
D RCFBP_21413 putative hydrolase (Predicted phosphatase/phosphohexomutase) K07025 K07025; putative hydrolase of the HAD superfamily
D RCFBP_20988 erpA; Iron-binding protein ErpA (Iron-sulfur cluster insertion protein) K15724 erpA; iron-sulfur cluster insertion protein
D RCFBP_11555 rbn; tRNA-processing ribonuclease BN K07058 K07058; membrane protein
D RCFBP_11189 conserved protein of unknown function,putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D RCFBP_21344 Glyoxalase/bleomycin resistance protein/dioxygenase (Dioxygenase) K04750 phnB; PhnB protein
D RCFBP_11418 conserved protein of unknown function K11477 glcG; glc operon protein GlcG
D RCFBP_20752 conserved protein of unknown function, putative LemA family protein K03744 lemA; LemA protein
D RCFBP_11876 conserved exported protein of unknown function (creA protein) K05805 creA; CreA protein
D RCFBP_11408 conserved protein of unknown function K03749 dedD; DedD protein
D RCFBP_10839 putative integral membrane protein DedA (dedA) K03975 dedA; membrane-associated protein
D RCFBP_20870 membrane protein of unknown function K03808 pqiA; paraquat-inducible protein A
D RCFBP_20871 pqiA; Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D RCFBP_21351 conserved membrane protein of unknown function; putative membrane protein K08972 K08972; putative membrane protein
D RCFBP_20626 conserved hypothetical protein; putative TRANSMEMBRANE PROTEIN K08983 K08983; putative membrane protein
D RCFBP_21223 conserved protein of unknown function (UPF0225) K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D RCFBP_20638 conserved hypothetical protein; ankyrin repeat K06867 K06867; uncharacterized protein
D RCFBP_11793 Conserved protein of unknown function, Ankyrin repeat domain K06867 K06867; uncharacterized protein
D RCFBP_21236 putative type III effector protein with ankyrin repeats K06867 K06867; uncharacterized protein
D RCFBP_20753 conserved exported protein of unknown function, DUF477 K06872 K06872; uncharacterized protein
D RCFBP_11836 putative hydrolase K06889 K06889; uncharacterized protein
D RCFBP_11736 putative phage baseplate protein K06903 W; Bacteriophage baseplate protein W
D RCFBP_11733 putative bacteriophage protein K06905 D; Bacteriophage probable baseplate hub protein
D RCFBP_11725 Putative phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D RCFBP_11726 phage tail core protein K06908 FII; Bacteriophage tail tube protein
D RCFBP_10628 conserved protein of unknown function, DUF815 K06923 K06923; uncharacterized protein
D RCFBP_10154 conserved protein of unknown function, CoA-binding domain K06929 K06929; uncharacterized protein
D RCFBP_11891 conserved protein of unknown function K06938 K06938; uncharacterized protein
D RCFBP_21234 conserved protein of unknown function K06938 K06938; uncharacterized protein
D RCFBP_10651 conserved exported protein of unknown function K06950 K06950; uncharacterized protein
D RCFBP_21038 putative bacteriocin processing protein, Peptidase C39 family, exported K06992 K06992; uncharacterized protein
D RCFBP_10777 conserved protein of unknown function, putative enzyme related to lactoylglutathione lyase protein K06996 K06996; uncharacterized protein
D RCFBP_10680 putative esterase, similariy with yqiA K07000 K07000; uncharacterized protein
D RCFBP_21354 putative 1 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein K07006 K07006; uncharacterized protein
D RCFBP_21159 putative hydrolase (alpha/beta superfamily domain) K07018 K07018; uncharacterized protein
D RCFBP_20911 putative enzyme with alpha/beta-hydrolase domain, YheT type K07019 K07019; uncharacterized protein
D RCFBP_11283 putative amidohydrolase/decarboxylase K07045 K07045; uncharacterized protein
D RCFBP_20797 putative amidohydrolase/decarboxylase K07045 K07045; uncharacterized protein
D RCFBP_10895 conserved protein of unknown function, putative zinc metallopeptidase K07054 K07054; uncharacterized protein
D RCFBP_21262 conserved protein of unknown function (nucleotidyltransferase) K07074 K07074; uncharacterized protein
D RCFBP_10128 conserved membrane protein of unknown function, DUF81 K07090 K07090; uncharacterized protein
D RCFBP_11519 conserved membrane protein of unknown function, DUF81 K07090 K07090; uncharacterized protein
D RCFBP_10881 conserved membrane protein of unknown function K07090 K07090; uncharacterized protein
D RCFBP_11000 conserved membrane protein of unknown function, DUF81 K07090 K07090; uncharacterized protein
D RCFBP_11544 Putative Metallophosphoesterase K07098 K07098; uncharacterized protein
D RCFBP_21442 conserved protein of unknown function K07098 K07098; uncharacterized protein
D RCFBP_20206 gpt; Xanthine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D RCFBP_20674 conserved membrane protein of unknown function K07112 K07112; uncharacterized protein
D RCFBP_21046 putative transporter component, transmembrane domains K07112 K07112; uncharacterized protein
D RCFBP_21047 Conserved protein of unknown function, transmembrane, signal K07112 K07112; uncharacterized protein
D RCFBP_10105 Putative histone-lysine N-methyltransferase fragment K07117 K07117; uncharacterized protein
D RCFBP_21421 conserved exported protein of unknown function (tetratricopeptide repeats) K07126 K07126; uncharacterized protein
D RCFBP_21086 putative peptidase, S16 family K07157 K07157; uncharacterized protein
D RCFBP_11882 coxE; carbon monoxide dehydrogenase accessory protein; may be involved in the addition of the Cu-ion to CoxL K07161 K07161; uncharacterized protein
D RCFBP_21449 conserved protein of unknown function K08998 K08998; uncharacterized protein
D RCFBP_10223 conserved exported protein of unknown function K09004 K09004; uncharacterized protein
D RCFBP_10906 putative lipoprotein K09005 K09005; uncharacterized protein
D RCFBP_11177 conserved protein of unknown function, GatB/Yqey domain K09117 K09117; uncharacterized protein
D RCFBP_21068 conserved protein of unknown function K09129 K09129; uncharacterized protein
D RCFBP_21161 conserved protein of unknown function (UPF 0250) K09158 K09158; uncharacterized protein
D RCFBP_11883 Putative Carbon monoxide dehydrogenase, coxG accessory protein K09386 K09386; uncharacterized protein
D RCFBP_10864 conserved protein of unknown function, UPF0434 K09791 K09791; uncharacterized protein
D RCFBP_20143 putative inner membrane lipoprotein K09792 K09792; uncharacterized protein
D RCFBP_20007 conserved protein of unknown function, UPF0125 K09801 K09801; uncharacterized protein
D RCFBP_20873 conserved exported protein of unknown function K09857 K09857; uncharacterized protein
D RCFBP_11375 conserved protein of unknown function, DUF328 K09861 K09861; uncharacterized protein
D RCFBP_10630 conserved protein of unknown function, UPF0243 family K09862 K09862; uncharacterized protein
D RCFBP_11084 conserved protein of unknown function, DUF482 K09919 K09919; uncharacterized protein
D RCFBP_21392 conserved protein of unknown function K09921 K09921; uncharacterized protein
D RCFBP_20579 conserved exported protein of unknown function K09924 K09924; uncharacterized protein
D RCFBP_10173 conserved protein of unknown function K09930 K09930; uncharacterized protein
D RCFBP_10418 conserved exported protein of unknown function, DUF1175 K09934 K09934; uncharacterized protein
D RCFBP_20209 conserved protein of unknown function K09937 K09937; uncharacterized protein
D RCFBP_10381 conserved membrane protein of unknown function K09939 K09939; uncharacterized protein
D RCFBP_10391 conserved protein of unknown function,DUF1415 K09941 K09941; uncharacterized protein
D RCFBP_10133 conserved protein of unknown function K09954 K09954; uncharacterized protein
D RCFBP_10874 conserved protein of unknown function, DUF886 K09975 K09975; uncharacterized protein
D RCFBP_20484 conserved protein of unknown function K09989 K09989; uncharacterized protein
D RCFBP_10831 conserved protein of unknown function K09990 K09990; uncharacterized protein
D RCFBP_20114 Putative phosphate transport regulator (distant homolog of PhoU) K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 22, 2024