+D GENES KO
#
KEGG Orthology (KO) - Rubrobacter xylanophilus
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rxy00010]
D Rxyl_0889 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Rxyl_2677 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rxyl_2082 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_2588 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_1656 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Rxyl_2541 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rxyl_2003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rxyl_2005 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rxyl_2948 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rxyl_0912 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rxyl_0913 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rxyl_1574 Pyruvate,water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_3073 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_1575 PEP-utilising enzyme, mobile region K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_2325 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rxyl_2324 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rxyl_0350 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rxyl_2405 alpha/beta hydrolase fold K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_0920 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rxyl_0921 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rxyl_0919 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Rxyl_0056 Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_0856 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1704 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_2531 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1172 Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D Rxyl_0680 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Rxyl_1732 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:rxy00020]
D Rxyl_2556 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rxyl_2557 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rxyl_1676 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rxyl_2824 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rxyl_0618 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rxyl_1297 Isocitrate dehydrogenase (NAD+) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D Rxyl_2072 isocitrate dehydrogenase (NADP) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D Rxyl_2535 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Rxyl_2534 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_1275 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rxyl_1276 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rxyl_0011 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rxyl_0012 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rxyl_2748 fumarase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Rxyl_2749 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Rxyl_2866 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rxyl_1290 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rxyl_2041 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Rxyl_0680 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Rxyl_2325 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rxyl_2324 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rxyl_0350 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rxyl_2405 alpha/beta hydrolase fold K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rxyl_0920 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rxyl_0921 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rxyl_0919 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:rxy00030]
D Rxyl_2677 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rxyl_0051 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Rxyl_0053 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Rxyl_0050 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Rxyl_1363 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rxyl_0049 Transketolase-like protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rxyl_0048 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Rxyl_0733 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Rxyl_1505 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Rxyl_0949 PfkB K00852 rbsK; ribokinase [EC:2.7.1.15]
D Rxyl_1888 PfkB K00852 rbsK; ribokinase [EC:2.7.1.15]
D Rxyl_0610 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Rxyl_0895 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rxyl_0079 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Rxyl_0551 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D Rxyl_1675 carbohydrate kinase, FGGY K25031 gntK; gluconokinase [EC:2.7.1.12]
D Rxyl_0078 PfkB K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Rxyl_2854 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rxyl_2541 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rxyl_1656 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Rxyl_2082 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_2588 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rxy00040]
D Rxyl_0537 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Rxyl_3115 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rxyl_1363 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rxyl_0833 carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D Rxyl_0402 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Rxyl_2898 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Rxyl_0401 Xylose isomerase-like TIM barrel K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Rxyl_1680 Rhamnose isomerase related K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Rxyl_1685 carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Rxyl_2379 Alcohol dehydrogenase, zinc-binding protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D Rxyl_1589 Alcohol dehydrogenase GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D Rxyl_0545 fumarylacetoacetate (FAA) hydrolase K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D Rxyl_0544 Aldehyde dehydrogenase (NAD+) K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D Rxyl_2925 delta-1-piperideine-6-carboxylate dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D Rxyl_2257 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D Rxyl_0832 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D Rxyl_1678 class II aldolase/adducin-like protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:rxy00051]
D Rxyl_2594 PfkB K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Rxyl_2595 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rxyl_0182 mannose-6-phosphate isomerase, type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rxyl_1134 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rxyl_1436 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Rxyl_1624 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rxyl_2808 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rxyl_0567 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rxyl_0832 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D Rxyl_1678 class II aldolase/adducin-like protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Rxyl_3006 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Rxyl_3012 Mandelate racemase/muconate lactonizing enzyme-like protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D Rxyl_1680 Rhamnose isomerase related K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Rxyl_1685 carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Rxyl_2082 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_2588 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_1656 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Rxyl_2297 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Rxyl_2379 Alcohol dehydrogenase, zinc-binding protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D Rxyl_1589 Alcohol dehydrogenase GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D Rxyl_0401 Xylose isomerase-like TIM barrel K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Rxyl_2541 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rxyl_2003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rxyl_0568 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00052 Galactose metabolism [PATH:rxy00052]
D Rxyl_3113 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_1236 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_0719 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_0889 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Rxyl_3047 short-chain dehydrogenase/reductase SDR K21620 sorbD; galactitol 2-dehydrogenase [EC:1.1.1.16]
D Rxyl_2082 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_2588 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_0552 Mandelate racemase/muconate lactonizing enzyme-like protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Rxyl_0547 Mandelate racemase/muconate lactonizing enzyme-like protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D Rxyl_2099 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rxyl_3169 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rxy00053]
D Rxyl_3115 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rxyl_3006 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_0545 fumarylacetoacetate (FAA) hydrolase K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
C 00500 Starch and sucrose metabolism [PATH:rxy00500]
D Rxyl_2099 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rxyl_3169 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rxyl_2046 beta-glucosidase. Glycosyl Hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Rxyl_0316 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Rxyl_0301 Alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Rxyl_0315 Trehalose synthase-like protein K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Rxyl_2413 glycoside hydrolase 15-related K01178 SGA1; glucoamylase [EC:3.2.1.3]
D Rxyl_0251 amylomaltase or 4-alpha-glucanotransferase. Glycosyl Hydrolase family 77 K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Rxyl_0314 alpha amylase, catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D Rxyl_1732 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Rxyl_0317 Glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Rxyl_0319 Malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D Rxyl_0318 Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Rxyl_2973 glycosyl transferase, group 1 K13057 treT; trehalose synthase [EC:2.4.1.245]
D Rxyl_3082 glycosyl transferase, group 1 K13057 treT; trehalose synthase [EC:2.4.1.245]
D Rxyl_2972 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Rxyl_2971 HAD-superfamily hydrolase subfamily IIB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Rxyl_0889 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Rxyl_2677 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rxyl_2594 PfkB K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rxy00520]
D Rxyl_0629 beta-N-acetylhexosaminidase. Glycosyl Hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rxyl_1993 glycoside hydrolase, family 3-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rxyl_1732 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Rxyl_1733 Phosphotransferase system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Rxyl_0658 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Rxyl_1731 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Rxyl_2594 PfkB K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Rxyl_0799 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rxyl_0137 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rxyl_2119 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Rxyl_0894 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Rxyl_0620 sugar isomerase (SIS) K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D Rxyl_1636 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rxyl_2807 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rxyl_2626 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rxyl_0889 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Rxyl_1172 Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D Rxyl_3115 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rxyl_1240 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D Rxyl_3113 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_1236 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_0719 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_2677 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rxyl_2595 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rxyl_0182 mannose-6-phosphate isomerase, type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rxyl_1134 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rxyl_1436 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Rxyl_1624 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rxyl_2808 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rxyl_0567 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rxyl_0568 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00620 Pyruvate metabolism [PATH:rxy00620]
D Rxyl_0856 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1704 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_2531 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_0920 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rxyl_0921 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rxyl_0919 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Rxyl_2325 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rxyl_2324 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rxyl_0350 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rxyl_2405 alpha/beta hydrolase fold K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_0056 Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rxyl_0913 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rxyl_2087 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rxyl_0035 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rxyl_1573 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rxyl_1572 Carbamoyl-phosphate synthase L chain, ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rxyl_0036 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rxyl_2088 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rxyl_2464 Carbamoyl-phosphate synthase L chain, ATP-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D Rxyl_0794 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_2718 thiamine pyrophosphate enzyme-like TPP binding region K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D Rxyl_1052 Lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D Rxyl_0969 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Rxyl_2200 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Rxyl_1619 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rxyl_1339 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rxyl_1123 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rxyl_2107 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D Rxyl_1110 Malate dehydrogenase (oxaloacetate decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Rxyl_1571 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Rxyl_2041 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Rxyl_1290 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rxyl_2748 fumarase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Rxyl_2749 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Rxyl_2866 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rxyl_0680 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Rxyl_1574 Pyruvate,water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_3073 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_1575 PEP-utilising enzyme, mobile region K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_2064 Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_3129 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rxyl_3131 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rxy00630]
D Rxyl_2063 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D Rxyl_0856 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1704 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_2531 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_2064 Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Rxyl_1290 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rxyl_2556 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rxyl_2557 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rxyl_1676 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rxyl_2824 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rxyl_0618 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2393 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Rxyl_1289 MaoC-like dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Rxyl_1869 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rxyl_1282 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rxyl_2464 Carbamoyl-phosphate synthase L chain, ATP-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D Rxyl_2369 methylmalonyl-CoA mutase-like protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Rxyl_1283 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Rxyl_2481 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Rxyl_2833 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Rxyl_3062 FAD linked oxidase-like protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Rxyl_2832 FAD linked oxidase-like protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Rxyl_2831 protein of unknown function DUF224, cysteine-rich region K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Rxyl_0619 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Rxyl_0923 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rxyl_0341 glutamate synthase (NADH) large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D Rxyl_1125 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1031 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_2498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_3196 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1649 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_0469 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_3186 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Rxyl_3185 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Rxyl_0767 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_3184 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_0470 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_3183 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Rxyl_2853 Glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D Rxyl_2851 Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Rxyl_1714 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Rxyl_2852 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Rxyl_2854 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rxyl_1183 Tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Rxyl_0079 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Rxyl_2724 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Rxyl_2725 formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Rxyl_2658 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Rxyl_2662 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:rxy00640]
D Rxyl_0856 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1704 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_2531 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1689 Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Rxyl_2480 branched-chain alpha-keto acid dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Rxyl_2479 branched-chain alpha-keto acid dehydrogenase E1 component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Rxyl_2478 branched-chain alpha-keto acid dehydrogenase E2 component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_0920 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rxyl_0921 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rxyl_0919 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_2087 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rxyl_0035 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rxyl_1573 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rxyl_1572 Carbamoyl-phosphate synthase L chain, ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rxyl_0036 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rxyl_2088 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rxyl_2464 Carbamoyl-phosphate synthase L chain, ATP-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D Rxyl_2903 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rxyl_1869 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rxyl_1282 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rxyl_2369 methylmalonyl-CoA mutase-like protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Rxyl_1283 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Rxyl_2481 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Rxyl_1276 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rxyl_1275 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rxyl_1716 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rxyl_2401 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Rxyl_2402 2-methylcitrate dehydratase PrpD K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D Rxyl_2564 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D Rxyl_2400 2,3-dimethylmalate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:rxy00650]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1761 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rxyl_2336 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rxyl_2057 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_2368 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Rxyl_1841 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Rxyl_0372 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Rxyl_1289 MaoC-like dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Rxyl_2386 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Rxyl_2385 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Rxyl_2393 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Rxyl_1584 Glutaconate CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D Rxyl_1583 Glutaconate CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D Rxyl_1183 Tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Rxyl_0011 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rxyl_0012 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rxyl_2903 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rxyl_2905 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_3175 Succinate-semialdehyde dehydrogenase (NAD(P)+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_2456 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_1749 lactaldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_0920 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rxyl_0921 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rxyl_0919 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Rxyl_2342 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rxyl_1569 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rxyl_2343 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Rxyl_3046 short-chain dehydrogenase/reductase SDR K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Rxyl_1958 Alcohol dehydrogenase GroES-like protein K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-]
D Rxyl_0543 Alcohol dehydrogenase GroES-like protein K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-]
D Rxyl_3075 Alcohol dehydrogenase GroES-like protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Rxyl_2104 beta-lactamase K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114]
D Rxyl_3125 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rxyl_2477 thiamine pyrophosphate enzyme-like TPP binding region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rxyl_3010 Alcohol dehydrogenase GroES-like protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:rxy00660]
D Rxyl_3125 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rxyl_2477 thiamine pyrophosphate enzyme-like TPP binding region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rxyl_2734 L-carnitine dehydratase/bile acid-inducible protein F K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D Rxyl_1276 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rxyl_1275 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rxyl_0670 MaoC-like dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D Rxyl_2737 MaoC-like dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D Rxyl_0200 Dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Rxyl_0278 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rxyl_1693 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rxyl_1692 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rxyl_0279 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rxyl_3130 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rxy00562]
D Rxyl_2307 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rxyl_1545 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rxyl_1213 Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Rxyl_0688 Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Rxyl_1212 di-myo-inositol-1,3'-phosphate-1'-phosphate synthase / CTP:L-myo-inositol-1-phosphate cytidylyltransferase K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34]
D Rxyl_1723 Myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Rxyl_1727 oxidoreductase-like protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Rxyl_1715 Xylose isomerase-like TIM barrel K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D Rxyl_1722 Xylose isomerase-like TIM barrel K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D Rxyl_1718 thiamine pyrophosphate enzyme, central region K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D Rxyl_1717 Myo-inositol catabolism IolB region K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D Rxyl_1728 PfkB K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D Rxyl_1716 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rxyl_2003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rxy00190]
D Rxyl_1634 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Rxyl_0130 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Rxyl_1633 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Rxyl_1632 NADH dehydrogenase (ubiquinone), 30 kDa subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Rxyl_1631 NADH dehydrogenase (ubiquinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Rxyl_1630 respiratory-chain NADH dehydrogenase, subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Rxyl_0128 respiratory-chain NADH dehydrogenase, subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Rxyl_1197 4Fe-4S ferredoxin, iron-sulfur binding protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Rxyl_0127 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Rxyl_1628 NADH-ubiquinone oxidoreductase, chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Rxyl_1627 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Rxyl_0125 NADH dehydrogenase (quinone) K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Rxyl_1626 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Rxyl_0124 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Rxyl_1625 Proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Rxyl_0123 NADH dehydrogenase (quinone) K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Rxyl_0126 NADH-ubiquinone oxidoreductase, chain 4L K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D Rxyl_1629 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2]
D Rxyl_1112 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Rxyl_1217 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Rxyl_1099 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Rxyl_0011 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rxyl_0012 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rxyl_2957 cytochrome b/b6-like protein K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D Rxyl_2711 cytochrome b/b6-like protein K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D Rxyl_2710 hypothetical protein K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D Rxyl_2956 Cytochrome b subunit of the bc complex-like protein K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D Rxyl_2709 Cytochrome bd-type quinol oxidase subunit 1-like protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rxyl_2567 Cytochrome bd-type quinol oxidase subunit 1-like protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rxyl_2955 Cytochrome bd-type quinol oxidase subunit 1-like protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rxyl_2959 hypothetical protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rxyl_1640 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rxyl_1638 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rxyl_1639 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rxyl_1641 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rxyl_1637 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rxyl_1644 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rxyl_1642 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rxyl_1643 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rxyl_2042 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Rxyl_0826 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D Rxyl_2310 HAD-superfamily hydrolase subfamily IA, variant 3 K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
D Rxyl_2935 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rxy00680]
D Rxyl_0147 Alcohol dehydrogenase GroES-like protein K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D Rxyl_2724 Formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Rxyl_2725 formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Rxyl_1649 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_0469 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_0923 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rxyl_2854 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rxyl_0912 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rxyl_1290 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rxyl_2541 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rxyl_1656 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Rxyl_2082 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_2588 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rxyl_2499 glutamate synthase (NADPH) GltB1 subunit K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21]
D Rxyl_2500 glutamate synthase (NADPH) GltB3 subunit K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]
D Rxyl_2501 glutamate synthase (NADPH) GltB2 subunit K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D Rxyl_0964 coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D Rxyl_0856 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1704 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_2531 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_0920 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rxyl_0921 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rxyl_0919 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Rxyl_1574 Pyruvate,water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_3073 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_1575 PEP-utilising enzyme, mobile region K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Rxyl_2948 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rxyl_0837 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rxyl_2338 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D Rxyl_0750 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D Rxyl_0975 FO synthase subunit 1 / FO synthase subunit 2 K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D Rxyl_0959 protein of unknown function DUF121 K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D Rxyl_0958 LPPG:FO 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D Rxyl_0961 coenzyme F420-0 gamma-glutamyl ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:rxy00910]
D Rxyl_2658 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Rxyl_2662 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Rxyl_1204 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Rxyl_1205 respiratory nitrate reductase alpha subunit apoprotein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_1206 respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_1208 respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_0963 Ferredoxin--nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D Rxyl_0235 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rxyl_2529 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Rxyl_1125 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1031 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_2498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_3196 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_0342 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rxyl_0341 glutamate synthase (NADH) large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D Rxyl_2848 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Rxyl_2353 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rxy00920]
D Rxyl_1777 Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D Rxyl_1783 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D Rxyl_0966 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rxyl_0967 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Rxyl_2355 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Rxyl_1414 phosphoesterase, RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Rxyl_0962 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Rxyl_1616 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Rxyl_0082 TQO small subunit DoxD K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D Rxyl_3069 DoxX K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D Rxyl_0976 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_2352 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_2802 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_3192 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rxyl_0463 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rxyl_0763 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rxyl_1089 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Rxyl_0336 selenium-binding protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D Rxyl_1784 luciferase-like protein K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rxy00061]
D Rxyl_2087 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rxyl_0035 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rxyl_1573 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rxyl_1572 Carbamoyl-phosphate synthase L chain, ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rxyl_0036 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rxyl_2088 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rxyl_2464 Carbamoyl-phosphate synthase L chain, ATP-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D Rxyl_1382 acyl carrier protein K02078 acpP; acyl carrier protein
D Rxyl_1379 acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rxyl_3058 acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rxyl_1378 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rxyl_1383 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rxyl_1081 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rxyl_1381 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_3007 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2394 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2335 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2415 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2740 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_1380 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rxyl_2060 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2458 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_1738 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2382 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_0371 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation [PATH:rxy00062]
D Rxyl_2454 3-ketoacyl-CoA thiolase K07509 HADHB; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00071 Fatty acid degradation [PATH:rxy00071]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2360 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2056 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_1737 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2454 3-ketoacyl-CoA thiolase K07509 HADHB; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_2057 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rxyl_2735 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rxyl_2418 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rxyl_2278 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rxyl_2061 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1746 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2387 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1877 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_0375 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2455 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2060 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2458 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_1738 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2382 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_0371 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Rxyl_0056 Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
D Rxyl_2112 HAD-superfamily subfamily IB, PSPase-like protein K13356 FAR; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rxy00561]
D Rxyl_2854 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_1064 Dihydroxyacetone kinase DhaK, subunit 1 K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D Rxyl_1067 Dihydroxyacetone kinase, subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D Rxyl_1068 Dihydroxyacetone kinase, subunit phosphotransferase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D Rxyl_1063 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Rxyl_1377 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rxyl_2113 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rxyl_0390 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rxyl_1439 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rxyl_1508 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Rxyl_2627 glycosyl transferase, family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D Rxyl_1240 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:rxy00564]
D Rxyl_1069 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Rxyl_2113 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rxyl_0390 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rxyl_1439 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rxyl_1508 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Rxyl_0307 Glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Rxyl_1999 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Rxyl_2067 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Rxyl_1403 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Rxyl_0272 CDP-diacylglycerol-choline O-phosphatidyltransferase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D Rxyl_0289 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rxyl_0288 phosphatidylserine decarboxylase-related K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Rxyl_1218 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Rxyl_2978 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Rxyl_0887 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Rxyl_0679 Phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Rxyl_1437 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Rxyl_2757 UbiA prenyltransferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rxy00592]
D Rxyl_2360 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2056 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_1737 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
D Rxyl_2000 lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rxy00230]
D Rxyl_2794 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Rxyl_0610 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Rxyl_0895 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rxyl_0997 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rxyl_0991 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Rxyl_0999 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rxyl_0996 phosphoribosylformylglycinamidine synthase subunit II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Rxyl_0994 phosphoribosylformylglycinamidine synthetase PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Rxyl_0995 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rxyl_0998 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Rxyl_0254 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Rxyl_0253 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Rxyl_0993 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Rxyl_0992 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rxyl_1000 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rxyl_1432 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Rxyl_0306 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rxyl_2311 3'-nucleotidase / 5'-nucleotidase / exopolyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rxyl_0606 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Rxyl_1488 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Rxyl_2835 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Rxyl_2186 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Rxyl_0815 IMP dehydrogenase related 2 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rxyl_1532 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rxyl_2326 Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Rxyl_0816 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rxyl_1473 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Rxyl_2874 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rxyl_1503 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Rxyl_1338 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rxyl_0990 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rxyl_1744 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D Rxyl_0377 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D Rxyl_0516 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Rxyl_2134 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rxyl_0980 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Rxyl_0967 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Rxyl_2355 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Rxyl_0966 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rxyl_2843 Urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D Rxyl_2844 Transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D Rxyl_2841 conserved hypothetical protein K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D Rxyl_2845 dihydroorotase, multifunctional complex type K01466 allB; allantoinase [EC:3.5.2.5]
D Rxyl_1854 Amidase, hydantoinase/carbamoylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Rxyl_0221 Amidase, hydantoinase/carbamoylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Rxyl_2745 Amidase, hydantoinase/carbamoylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Rxyl_2847 aspartate carbamoyltransferase K24871 E2.1.3.16; ureidoglycine carbamoyltransferase [EC:2.1.3.16]
D Rxyl_2848 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:rxy00240]
D Rxyl_1477 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rxyl_1478 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rxyl_1480 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rxyl_1479 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Rxyl_1475 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Rxyl_1476 dihydroorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Rxyl_2302 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Rxyl_2300 Orotidine 5'-phosphate decarboxylase subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Rxyl_1400 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Rxyl_1532 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rxyl_1531 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Rxyl_1448 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Rxyl_1440 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Rxyl_0306 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rxyl_2311 3'-nucleotidase / 5'-nucleotidase / exopolyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rxyl_1648 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rxyl_1481 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rxyl_0516 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Rxyl_0490 Indigoidine synthase A like protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Rxyl_1507 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Rxyl_0224 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Rxyl_2874 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rxyl_1647 CMP/dCMP deaminase, zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Rxyl_1962 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Rxyl_2622 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Rxyl_0607 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D Rxyl_2828 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Rxyl_2633 Thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Rxyl_2746 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Rxyl_0219 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rxy00250]
D Rxyl_0107 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rxyl_2741 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Rxyl_2849 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Rxyl_0923 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rxyl_2908 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Rxyl_1445 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Rxyl_2882 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rxyl_0979 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rxyl_0990 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rxyl_0992 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rxyl_1480 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rxyl_2903 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rxyl_2905 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_3175 Succinate-semialdehyde dehydrogenase (NAD(P)+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_2456 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_1749 lactaldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_0342 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rxyl_2529 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Rxyl_2922 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Rxyl_1125 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1031 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_2498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_3196 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1477 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rxyl_1478 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rxyl_0995 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rxyl_0799 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rxyl_0137 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rxyl_0997 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rxy00260]
D Rxyl_1090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rxyl_0098 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rxyl_1092 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rxyl_1091 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rxyl_3124 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Rxyl_3123 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rxyl_0796 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Rxyl_1649 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_0469 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_0923 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rxyl_2854 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rxyl_2948 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rxyl_0837 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rxyl_3186 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Rxyl_3185 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Rxyl_0767 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_3184 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_0470 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_3183 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Rxyl_0526 D-amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D Rxyl_0461 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D Rxyl_0289 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rxyl_0758 glucose-methanol-choline oxidoreductase K17755 codA; choline oxidase [EC:1.1.3.17]
D Rxyl_2917 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D Rxyl_0762 FAD dependent oxidoreductase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10]
D Rxyl_2926 Sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D Rxyl_0768 Sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D Rxyl_0471 Sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D Rxyl_2496 aminomethyltransferase K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D Rxyl_2494 FAD dependent oxidoreductase K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D Rxyl_2497 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D Rxyl_2495 sarcosine oxidase subunit D K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D Rxyl_2089 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rxyl_2090 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rxyl_0305 Tryptophan synthase, beta chain-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rxyl_0412 aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:rxy00270]
D Rxyl_3192 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rxyl_0463 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rxyl_0763 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rxyl_0843 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D Rxyl_0841 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rxyl_1470 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rxyl_1488 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Rxyl_0206 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Rxyl_3037 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Rxyl_2232 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rxyl_1998 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rxyl_0228 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rxyl_1090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rxyl_0098 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rxyl_1092 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rxyl_1091 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rxyl_1089 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Rxyl_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_3128 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_0976 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_2352 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_2802 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_1290 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rxyl_2591 altronate hydrolase K16845 suyA; (2R)-sulfolactate sulfo-lyase subunit alpha [EC:4.4.1.24]
D Rxyl_2590 D-galactarate dehydratase/Altronate hydrolase-like protein K16846 suyB; (2R)-sulfolactate sulfo-lyase subunit beta [EC:4.4.1.24]
D Rxyl_0746 cysteine synthases K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Rxyl_0837 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:rxy00280]
D Rxyl_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_3128 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_2467 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Rxyl_2480 branched-chain alpha-keto acid dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Rxyl_2479 branched-chain alpha-keto acid dehydrogenase E1 component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Rxyl_2478 branched-chain alpha-keto acid dehydrogenase E2 component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_2735 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rxyl_2418 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rxyl_2278 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rxyl_1707 butyryl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_2360 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2056 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_1737 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2454 3-ketoacyl-CoA thiolase K07509 HADHB; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2464 Carbamoyl-phosphate synthase L chain, ATP-binding protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D Rxyl_1869 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rxyl_1282 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rxyl_2369 methylmalonyl-CoA mutase-like protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Rxyl_1283 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Rxyl_2481 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Rxyl_0425 6-phosphogluconate dehydrogenase, NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Rxyl_1716 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_2903 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rxyl_1702 3-methylcrotonoyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D Rxyl_1703 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D Rxyl_2342 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rxyl_1569 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rxy00290]
D Rxyl_0278 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rxyl_1693 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rxyl_1692 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rxyl_0279 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rxyl_3130 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Rxyl_3125 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rxyl_2477 thiamine pyrophosphate enzyme-like TPP binding region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rxyl_3127 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rxyl_1326 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rxyl_0835 Dihydroxyacid dehydratase/phosphogluconate dehydratase-like protein K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rxyl_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_3128 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_2467 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Rxyl_3129 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rxyl_3131 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rxy00300]
D Rxyl_1091 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rxyl_1090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rxyl_0098 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rxyl_1092 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rxyl_0325 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rxyl_0097 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rxyl_0096 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Rxyl_0073 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Rxyl_2888 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rxyl_0072 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rxyl_2475 acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rxyl_1635 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rxyl_0095 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rxyl_0074 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Rxyl_0075 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Rxyl_2328 aminotransferase, class I and II K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Rxyl_2305 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rxyl_1497 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rxy00310]
D Rxyl_2534 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_2061 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1746 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2387 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1877 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_0375 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2455 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2903 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rxyl_2905 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_3175 Succinate-semialdehyde dehydrogenase (NAD(P)+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_2456 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_1749 lactaldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_2990 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D Rxyl_2927 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rxy00220]
D Rxyl_2889 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Rxyl_2882 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rxyl_0979 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rxyl_1270 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D Rxyl_0995 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rxyl_1125 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1031 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_2498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_3196 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_2529 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Rxyl_2848 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Rxyl_2877 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Rxyl_2886 glutamate N-acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Rxyl_2887 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Rxyl_2885 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Rxyl_2888 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rxyl_1036 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rxy00330]
D Rxyl_0459 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Rxyl_3038 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Rxyl_0224 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Rxyl_1696 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D Rxyl_2410 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D Rxyl_1695 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D Rxyl_2411 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D Rxyl_0461 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D Rxyl_2907 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_0468 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_0238 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_1701 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_1270 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D Rxyl_1485 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Rxyl_2923 L-proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D Rxyl_2922 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Rxyl_2259 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D Rxyl_2251 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D Rxyl_2192 putative reductase K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D Rxyl_0526 D-amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D Rxyl_2927 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:rxy00340]
D Rxyl_1101 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Rxyl_1100 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Rxyl_2116 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Rxyl_1105 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Rxyl_1104 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Rxyl_2117 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Rxyl_1103 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Rxyl_0726 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rxyl_0695 histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D Rxyl_2572 Histidinol phosphate phosphatase, HisJ K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Rxyl_1102 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Rxyl_0576 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Rxyl_0581 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Rxyl_0583 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Rxyl_0585 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D Rxyl_0584 amidohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_0685 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
D Rxyl_0687 protein of unknown function DUF323 K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50]
C 00350 Tyrosine metabolism [PATH:rxy00350]
D Rxyl_0726 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rxyl_1947 tyrosinase K00505 TYR; tyrosinase [EC:1.14.18.1]
D Rxyl_1038 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Rxyl_0056 Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rxyl_1857 4-hydroxyphenylacetate 3-hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D Rxyl_1035 Betaine-aldehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D Rxyl_2905 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_3175 Succinate-semialdehyde dehydrogenase (NAD(P)+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_2456 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_1749 lactaldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_1758 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:rxy00360]
D Rxyl_1038 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Rxyl_1845 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Rxyl_1851 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Rxyl_1756 phenylacetic acid catabolic K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D Rxyl_2341 Enoyl-CoA hydratase / short chain enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Rxyl_1761 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rxyl_2336 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rxyl_0726 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rxyl_1758 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D Rxyl_1818 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Rxyl_2256 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Rxyl_0468 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_0238 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_1701 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_1739 histidine ammonia-lyase K10775 PAL; phenylalanine ammonia-lyase [EC:4.3.1.24]
D Rxyl_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:rxy00380]
D Rxyl_2240 Aminocarboxymuconate-semialdehyde decarboxylase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D Rxyl_2534 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_2061 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1746 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2387 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1877 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_0375 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2455 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1038 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_0235 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rxyl_2315 nitrile hydratase, alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D Rxyl_0468 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_0238 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_1701 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rxy00400]
D Rxyl_0960 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rxyl_0728 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rxyl_1459 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Rxyl_1588 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Rxyl_1362 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rxyl_1460 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Rxyl_1441 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Rxyl_1461 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Rxyl_2115 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rxyl_2096 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Rxyl_2095 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Rxyl_2091 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Rxyl_2094 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Rxyl_2089 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rxyl_2090 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rxyl_0305 Tryptophan synthase, beta chain-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rxyl_0727 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D Rxyl_1244 prephenate dehydratase / chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Rxyl_0725 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Rxyl_0726 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rxy00410]
D Rxyl_2903 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_2469 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rxyl_2746 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Rxyl_0219 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_1716 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rxy00430]
D Rxyl_0295 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rxyl_1269 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rxyl_2908 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Rxyl_1445 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Rxyl_2529 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:rxy00450]
D Rxyl_0843 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D Rxyl_0841 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rxyl_0166 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Rxyl_0229 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Rxyl_0966 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rxyl_1061 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Rxyl_1983 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Rxyl_2630 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rxy00460]
D Rxyl_2046 beta-glucosidase. Glycosyl Hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Rxyl_0235 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rxyl_0295 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rxyl_1269 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rxyl_2741 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Rxyl_2849 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Rxyl_1649 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_0469 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_2658 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Rxyl_2662 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:rxy00470]
D Rxyl_0804 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rxyl_2952 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rxyl_2329 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rxyl_0995 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rxyl_1602 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Rxyl_1495 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rxyl_2779 protein of unknown function DUF1611 K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D Rxyl_2780 Mandelate racemase/muconate lactonizing enzyme-like protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Rxyl_0095 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rxyl_0075 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Rxyl_0526 D-amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D Rxyl_2259 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D Rxyl_2251 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D Rxyl_2192 putative reductase K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D Rxyl_2258 dihydrodipicolinate synthase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D Rxyl_1818 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Rxyl_2256 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rxy00480]
D Rxyl_0295 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rxyl_1269 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rxyl_0030 Enzymatic protein of unknown function K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D Rxyl_1127 Enzymatic protein of unknown function K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D Rxyl_1350 Enzymatic protein of unknown function K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D Rxyl_1124 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rxyl_0239 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rxyl_0050 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Rxyl_0051 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rxy00511]
D Rxyl_2051 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis [PATH:rxy00540]
D Rxyl_0712 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Rxyl_0711 RfaE bifunctional protein, domain II K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rxy00541]
D Rxyl_3113 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_1236 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_0719 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rxyl_3115 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rxyl_3121 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rxyl_3122 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rxyl_3114 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rxyl_3120 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rxyl_3106 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rxyl_2595 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rxyl_0182 mannose-6-phosphate isomerase, type II K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rxyl_1134 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rxyl_0567 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rxyl_0568 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Rxyl_0894 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Rxyl_2626 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:rxy00550]
D Rxyl_1636 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rxyl_2807 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rxyl_1492 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rxyl_1495 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rxyl_2305 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rxyl_2952 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rxyl_2329 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rxyl_1497 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rxyl_1402 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rxyl_1243 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rxyl_1496 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rxyl_1493 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rxyl_2308 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rxyl_1138 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rxyl_1498 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rxyl_0022 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D Rxyl_2298 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rxyl_2970 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Rxyl_3016 Domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D Rxyl_3015 CobB/CobQ-like glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:rxy00552]
D Rxyl_1243 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rxyl_2691 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Rxyl_0152 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Rxyl_1540 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rxy00730]
D Rxyl_2791 Phosphomethylpyrimidine kinase type-2 K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Rxyl_0109 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_1353 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_2806 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Rxyl_0462 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Rxyl_2396 thiamine biosynthesis protein ThiS K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Rxyl_2790 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Rxyl_2395 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Rxyl_2788 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Rxyl_2786 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Rxyl_2134 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rxyl_2784 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Rxyl_2792 transcriptional activator, TenA family K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-]
C 00740 Riboflavin metabolism [PATH:rxy00740]
D Rxyl_1780 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Rxyl_1366 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rxyl_0381 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rxyl_1364 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rxyl_1367 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Rxyl_1365 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Rxyl_1416 riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Rxyl_1783 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D Rxyl_2790 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Rxyl_2794 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rxy00750]
D Rxyl_2372 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Rxyl_0612 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Rxyl_3123 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rxyl_1316 Vitamin B6 biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Rxyl_1317 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rxy00760]
D Rxyl_0107 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rxyl_0105 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Rxyl_0106 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Rxyl_1267 Quinolinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Rxyl_0606 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Rxyl_0306 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rxyl_2311 3'-nucleotidase / 5'-nucleotidase / exopolyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rxyl_1522 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Rxyl_2763 NH(3)-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Rxyl_1341 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Rxyl_1454 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Rxyl_2939 pyridine transhydrogenase subunit (alpha)2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Rxyl_2938 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Rxyl_2940 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Rxyl_1694 isochorismatase hydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D Rxyl_2905 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_3175 Succinate-semialdehyde dehydrogenase (NAD(P)+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_2456 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rxyl_1749 lactaldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rxy00770]
D Rxyl_3125 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rxyl_2477 thiamine pyrophosphate enzyme-like TPP binding region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rxyl_3127 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rxyl_1326 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rxyl_0835 Dihydroxyacid dehydratase/phosphogluconate dehydratase-like protein K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rxyl_2991 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Rxyl_0382 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Rxyl_2469 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rxyl_2182 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Rxyl_1471 Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Rxyl_1373 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Rxyl_2023 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Rxyl_0801 holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Rxyl_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_3128 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_2746 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Rxyl_0219 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rxy00780]
D Rxyl_1383 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rxyl_1081 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rxyl_1381 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_3007 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2394 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2335 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2415 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2740 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_1380 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rxyl_2609 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rxy00785]
D Rxyl_2547 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Rxyl_2548 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Rxyl_0957 biotin/lipoate A/B protein ligase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D Rxyl_0058 biotin/lipoate A/B protein ligase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D Rxyl_0450 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_2325 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rxyl_2324 Transketolase, central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rxyl_0350 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rxyl_2405 alpha/beta hydrolase fold K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rxyl_2535 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Rxyl_2534 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rxyl_2480 branched-chain alpha-keto acid dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Rxyl_2479 branched-chain alpha-keto acid dehydrogenase E1 component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Rxyl_2478 branched-chain alpha-keto acid dehydrogenase E2 component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Rxyl_3186 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Rxyl_3185 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Rxyl_0767 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_3184 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_0470 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_3183 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rxy00790]
D Rxyl_1171 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Rxyl_0308 Twin-arginine translocation pathway signal K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Rxyl_0310 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Rxyl_2579 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Rxyl_2183 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Rxyl_2184 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Rxyl_1534 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Rxyl_1780 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Rxyl_1366 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rxyl_0381 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rxyl_0761 aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Rxyl_2576 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rxyl_2043 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Rxyl_1019 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rxyl_1981 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rxyl_1122 molybdopterin binding domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rxyl_2986 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Rxyl_1255 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rxy00670]
D Rxyl_1568 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Rxyl_2519 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Rxyl_0766 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Rxyl_0827 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Rxyl_2517 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Rxyl_1566 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Rxyl_1649 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_0469 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rxyl_0999 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rxyl_1000 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rxyl_1467 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rxyl_1951 formyl transferase-like protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rxyl_0767 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_3184 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_0470 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rxyl_0843 homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D Rxyl_2633 Thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Rxyl_0765 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Rxyl_1576 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Rxyl_1321 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rxy00860]
D Rxyl_2174 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_2856 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_1979 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Rxyl_1975 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Rxyl_1976 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rxyl_1978 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Rxyl_1977 uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Rxyl_1980 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Rxyl_0505 transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D Rxyl_0646 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Rxyl_1131 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Rxyl_0639 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Rxyl_0643 precorrin-3 methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D Rxyl_0640 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Rxyl_0641 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Rxyl_0642 precorrin-6Y C5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D Rxyl_0645 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Rxyl_0638 cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Rxyl_0635 hydrogenobyrinic acid a,c-diamide cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Rxyl_0212 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rxyl_0637 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rxyl_0634 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Rxyl_0649 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Rxyl_0652 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Rxyl_0648 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Rxyl_0647 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Rxyl_0651 phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Rxyl_0636 protoporphyrin IX magnesium-chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Rxyl_0605 hypothetical protein K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D Rxyl_0604 oxidoreductase/nitrogenase, component 1 K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D Rxyl_1070 Rubrerythrin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D Rxyl_1830 multicopper oxidase, type 3 K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rxy00130]
D Rxyl_1973 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Rxyl_2897 isochorismate synthases K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D Rxyl_2896 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D Rxyl_2894 alpha/beta hydrolase fold K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D Rxyl_2892 Mandelate racemase/muconate lactonizing enzyme-like protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D Rxyl_2891 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D Rxyl_2893 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D Rxyl_1967 1,4-Dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Rxyl_1971 amidohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D Rxyl_1050 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rxy00900]
D Rxyl_1404 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Rxyl_2176 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Rxyl_0893 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Rxyl_2175 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Rxyl_1406 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Rxyl_2212 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_0400 Isopentenyl-diphosphate delta-isomerase, FMN-dependent K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Rxyl_1456 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rxyl_2755 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rxyl_1402 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:rxy00909]
D Rxyl_2756 Prenyltransferase/squalene oxidase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rxy00906]
D Rxyl_0844 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rxyl_0845 amine oxidase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D Rxyl_2038 Lycopene beta and epsilon cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D Rxyl_3060 Lycopene beta and epsilon cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rxy00907]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_2360 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2056 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_1737 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Rxyl_0049 Transketolase-like protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics [PATH:rxy01059]
D Rxyl_0953 flavin reductase-like, FMN-binding protein K21185 sgcE6; flavin reductase
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products [PATH:rxy01057]
D Rxyl_1781 flavin reductase-like, FMN-binding protein K14631 actVB; flavin reductase ActVB [EC:1.5.1.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rxy00523]
D Rxyl_3121 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rxyl_3122 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rxyl_3114 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rxyl_3120 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rxyl_3106 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D Rxyl_2897 isochorismate synthases K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:rxy01055]
D Rxyl_2999 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D Rxyl_3122 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rxyl_3114 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rxy00946]
D Rxyl_2046 beta-glucosidase. Glycosyl Hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
D Rxyl_2843 Urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:rxy00311]
D Rxyl_0526 D-amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D Rxyl_2001 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Rxyl_1712 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:rxy00261]
D Rxyl_2999 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D Rxyl_0966 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rxyl_1090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rxyl_0098 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rxyl_1092 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rxyl_0325 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rxyl_0097 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rxyl_0096 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rxy00521]
D Rxyl_0889 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D Rxyl_1213 Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Rxyl_0688 Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Rxyl_2307 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rxyl_1545 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rxyl_1723 Myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Rxyl_1727 oxidoreductase-like protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Rxyl_3121 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rxyl_3122 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rxyl_3114 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rxyl_3120 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rxyl_3106 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Rxyl_0889 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rxy00525]
D Rxyl_3121 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rxyl_3122 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rxyl_3114 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rxy00401]
D Rxyl_0725 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Rxyl_0726 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Rxyl_2115 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rxyl_2096 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Rxyl_1379 acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rxyl_3058 acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rxyl_1381 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_3007 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2394 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2335 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2415 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2740 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Rxyl_1382 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rxy00999]
D Rxyl_1470 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rxyl_1362 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rxyl_2046 beta-glucosidase. Glycosyl Hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D Rxyl_0989 ParB-like nuclease K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rxy00362]
D Rxyl_1578 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D Rxyl_2360 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2056 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_1737 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2243 Catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1794 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1327 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1051 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D Rxyl_1580 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D Rxyl_1581 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D Rxyl_1579 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D Rxyl_1577 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Rxyl_0201 conserved hypothetical protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D Rxyl_0200 Dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Rxyl_1564 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rxyl_2057 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rxyl_2061 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1746 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2387 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1877 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_0375 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_2455 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rxyl_1761 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rxyl_2336 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rxy00627]
D Rxyl_2315 nitrile hydratase, alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D Rxyl_0468 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_0238 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_1701 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_0235 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rxyl_0794 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Rxyl_1542 thiamine pyrophosphate enzyme-like TPP binding region K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D Rxyl_0944 thiamine pyrophosphate enzyme-like TPP-binding protein K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D Rxyl_0473 Phenol hydroxylase-like dimerisation K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D Rxyl_2279 AMP-dependent synthetase and ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D Rxyl_2274 NADH:flavin oxidoreductase/NADH oxidase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D Rxyl_0192 glycine cleavage T protein (aminomethyl transferase) K15066 ligM; vanillate/3-O-methylgallate O-demethylase [EC:2.1.1.341]
D Rxyl_0209 glycine cleavage T protein (aminomethyl transferase) K15066 ligM; vanillate/3-O-methylgallate O-demethylase [EC:2.1.1.341]
D Rxyl_1565 aminomethyltransferase K15066 ligM; vanillate/3-O-methylgallate O-demethylase [EC:2.1.1.341]
C 00364 Fluorobenzoate degradation [PATH:rxy00364]
D Rxyl_2315 nitrile hydratase, alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D Rxyl_1051 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rxy00625]
D Rxyl_0056 Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rxyl_2380 Betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rxyl_0147 Alcohol dehydrogenase GroES-like protein K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D Rxyl_0508 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Rxyl_1673 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rxy00361]
D Rxyl_1051 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D Rxyl_2243 Catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1794 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1327 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_0508 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Rxyl_1673 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:rxy00623]
D Rxyl_0473 Phenol hydroxylase-like dimerisation K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D Rxyl_1758 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D Rxyl_1051 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation [PATH:rxy00622]
D Rxyl_1758 Alcohol dehydrogenase, zinc-binding protein K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D Rxyl_2243 Catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1794 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1327 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
D Rxyl_0920 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rxyl_0921 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rxyl_0919 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
D Rxyl_2360 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_2056 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rxyl_1737 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rxy00643]
D Rxyl_2315 nitrile hydratase, alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D Rxyl_0468 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_0238 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_1701 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rxyl_0235 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rxyl_2243 Catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1794 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1327 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rxyl_1584 Glutaconate CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D Rxyl_1583 Glutaconate CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:rxy00930]
D Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D Rxyl_1543 Cupin 2, conserved barrel K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
D Rxyl_0538 Cupin 2, conserved barrel K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rxy00626]
D Rxyl_0056 Alcohol dehydrogenase GroES-like protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D Rxyl_1580 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D Rxyl_1581 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rxy03020]
D Rxyl_2162 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rxyl_2161 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rxyl_2128 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rxyl_1472 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rxy03010]
D Rxyl_2024 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Rxyl_1398 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Rxyl_2149 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Rxyl_2129 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Rxyl_2138 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Rxyl_0849 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Rxyl_2159 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Rxyl_2141 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Rxyl_2120 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Rxyl_2156 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Rxyl_2130 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Rxyl_2160 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Rxyl_2131 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Rxyl_2142 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Rxyl_1417 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Rxyl_1388 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Rxyl_2146 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Rxyl_0850 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Rxyl_2151 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Rxyl_1517 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Rxyl_2165 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Rxyl_2152 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Rxyl_2155 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Rxyl_2154 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Rxyl_2143 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Rxyl_2140 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Rxyl_2163 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rxyl_0851 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Rxyl_2164 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Rxyl_2166 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Rxyl_2121 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Rxyl_2145 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Rxyl_2136 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Rxyl_2148 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Rxyl_2127 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Rxyl_2139 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Rxyl_1392 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Rxyl_1303 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Rxyl_1525 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Rxyl_2150 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Rxyl_2153 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Rxyl_2144 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Rxyl_0896 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Rxyl_1524 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Rxyl_1368 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Rxyl_2147 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Rxyl_2137 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Rxyl_1654 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Rxyl_1376 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Rxyl_2169 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Rxyl_3216 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Rxyl_1302 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Rxyl_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rxyl_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rxyl_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rxy00970]
D Rxyl_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rxyl_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rxyl_R0052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rxyl_R0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rxyl_R0049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rxyl_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rxyl_R0006 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rxyl_R0027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rxyl_R0016 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rxyl_R0020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rxyl_R0010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rxyl_R0005 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rxyl_R0014 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rxyl_R0061 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rxyl_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rxyl_R0032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rxyl_R0002 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rxyl_R0030 tRNA-His K14226 tRNA-His; tRNA His
D Rxyl_R0054 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rxyl_R0038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0003 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rxyl_R0058 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rxyl_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rxyl_R0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rxyl_R0045 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rxyl_R0017 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rxyl_R0050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rxyl_R0012 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rxyl_R0033 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rxyl_R0059 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rxyl_R0008 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rxyl_R0062 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rxyl_R0056 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rxyl_R0042 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rxyl_R0035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rxyl_R0044 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rxyl_R0040 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rxyl_R0043 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rxyl_R0046 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rxyl_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rxyl_R0021 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rxyl_R0036 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D Rxyl_2174 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_2856 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_0830 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rxyl_1878 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rxyl_0834 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rxyl_0829 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rxyl_1359 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rxyl_1351 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rxyl_0775 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Rxyl_1300 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rxyl_1086 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rxyl_1983 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Rxyl_2173 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rxyl_2630 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rxyl_1467 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rxyl_1951 formyl transferase-like protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rxyl_1535 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rxyl_3202 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rxyl_2428 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rxyl_2180 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rxyl_1659 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rxyl_1087 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rxyl_1340 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rxyl_1305 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rxyl_1306 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rxyl_1311 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rxyl_0275 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rxy03060]
D Rxyl_2135 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rxyl_2168 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rxyl_2002 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rxyl_1334 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rxyl_1335 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rxyl_2322 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_3213 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_1621 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rxyl_1387 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rxyl_R0053 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Rxyl_1386 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rxyl_1314 arsenite-activated ATPase (arsA) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Rxyl_1969 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Rxyl_1025 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Rxyl_1987 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D Rxyl_1968 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Rxyl_0250 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rxyl_2818 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rxy04122]
D Rxyl_0109 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_1353 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_0976 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_2352 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_2802 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rxyl_1354 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rxyl_1019 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rxyl_2552 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Rxyl_0744 thiamineS K03636 moaD; sulfur-carrier protein
D Rxyl_0743 UBA/THIF-type NAD/FAD binding fold K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D Rxyl_1981 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rxyl_1122 molybdopterin binding domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rxyl_2806 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rxy03018]
D Rxyl_0912 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rxyl_1418 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rxyl_1604 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rxyl_1655 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rxyl_1425 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Rxyl_1420 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Rxyl_0784 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Rxyl_0814 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rxyl_2935 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Rxyl_2803 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Rxyl_0806 metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rxy03030]
D Rxyl_2984 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rxyl_1096 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rxyl_2444 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rxyl_1961 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rxyl_1518 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rxyl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rxyl_0852 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rxyl_1502 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rxyl_0045 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rxyl_1393 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Rxyl_0795 RNase HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D Rxyl_2025 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rxyl_0327 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rxy03410]
D Rxyl_2676 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rxyl_2229 HhH-GPD K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Rxyl_1309 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Rxyl_1786 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rxyl_2433 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rxyl_2550 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rxyl_1215 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Rxyl_0808 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rxyl_0503 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rxyl_2949 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rxyl_1787 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rxyl_1147 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Rxyl_2025 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rxyl_0888 phosphoesterase, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rxyl_0327 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rxy03420]
D Rxyl_0909 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rxyl_2016 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Rxyl_2021 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Rxyl_2010 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Rxyl_0825 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rxyl_2025 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rxyl_0327 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rxy03430]
D Rxyl_0292 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Rxyl_0293 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rxyl_0034 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rxyl_0825 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rxyl_0888 phosphoesterase, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rxyl_0045 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rxyl_1096 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rxyl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rxyl_2444 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rxyl_1518 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rxyl_1961 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rxyl_2984 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rxyl_0327 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rxyl_1835 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rxy03440]
D Rxyl_0888 phosphoesterase, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rxyl_0045 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rxyl_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Rxyl_1504 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Rxyl_0510 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D Rxyl_1423 RecA protein K03553 recA; recombination protein RecA
D Rxyl_2025 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rxyl_1323 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Rxyl_1324 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Rxyl_1322 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Rxyl_1371 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rxyl_1096 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rxyl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rxyl_2444 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rxyl_1518 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rxyl_1961 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rxyl_2984 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rxyl_1469 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rxy02010]
D Rxyl_2085 hydroxymethylpyrimidine-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D Rxyl_2084 binding-protein-dependent transport systems inner membrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D Rxyl_2650 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rxyl_2651 NifC-like ABC-type porter K02018 modB; molybdate transport system permease protein
D Rxyl_1175 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rxyl_1174 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rxyl_1173 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Rxyl_2913 extracellular solute-binding protein, family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Rxyl_2915 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein
D Rxyl_2914 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D Rxyl_2912 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Rxyl_1557 Twin-arginine translocation pathway signal K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rxyl_2583 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rxyl_2582 Twin-arginine translocation pathway signal K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rxyl_2581 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rxyl_1556 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Rxyl_2584 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Rxyl_1555 glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Rxyl_2585 glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Rxyl_0580 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Rxyl_0982 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Rxyl_0983 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rxyl_0984 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rxyl_0578 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rxyl_0579 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rxyl_0577 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Rxyl_0985 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Rxyl_1992 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rxyl_0621 extracellular solute-binding protein, family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Rxyl_0622 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Rxyl_0623 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Rxyl_0213 Twin-arginine translocation pathway signal K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Rxyl_1991 extracellular solute-binding protein, family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Rxyl_0062 extracellular solute-binding protein, family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Rxyl_1990 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D Rxyl_1989 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D Rxyl_0155 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Rxyl_0157 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Rxyl_0158 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Rxyl_0156 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Rxyl_0948 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_3001 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_2603 Twin-arginine translocation pathway signal K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_0398 periplasmic sugar binding protein-like protein K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_1890 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_3002 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_0947 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_2602 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_0395 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_0396 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_1889 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_0946 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Rxyl_3003 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Rxyl_0397 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Rxyl_0950 RbsD or FucU transport K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D Rxyl_1892 RbsD or FucU transport K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D Rxyl_1681 putative secreted solute-binding lipoprotein K10559 rhaS; rhamnose transport system substrate-binding protein
D Rxyl_1683 inner-membrane translocator K10560 rhaP; rhamnose transport system permease protein
D Rxyl_1682 inner-membrane translocator K10561 rhaQ; rhamnose transport system permease protein
D Rxyl_1684 ABC transporter related K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D Rxyl_2071 Twin-arginine translocation pathway signal K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Rxyl_2070 binding-protein-dependent transport systems inner membrane component K17238 inoF; inositol-phosphate transport system permease protein
D Rxyl_2069 binding-protein-dependent transport systems inner membrane component K17239 inoG; inositol-phosphate transport system permease protein
D Rxyl_2068 ABC transporter related K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Rxyl_0818 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rxyl_0819 Phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D Rxyl_0820 Phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein
D Rxyl_0821 Phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Rxyl_2032 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0193 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0363 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0362 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_2031 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_0194 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_2030 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rxyl_0195 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rxyl_2029 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_0196 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_0360 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_2028 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rxyl_0866 Twin-arginine translocation pathway signal K15580 oppA; oligopeptide transport system substrate-binding protein
D Rxyl_0867 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Rxyl_0868 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Rxyl_0869 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Rxyl_0870 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Rxyl_2901 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Rxyl_0226 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Rxyl_1894 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Rxyl_2124 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Rxyl_2470 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Rxyl_2126 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_2472 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_2125 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_2471 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_1116 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D Rxyl_1117 ABC transporter related K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Rxyl_1605 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Rxyl_1606 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS) [PATH:rxy02060]
D Rxyl_1734 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Rxyl_1735 HPrNtr domain containing protein K02784 ptsH; phosphocarrier protein HPr
D Rxyl_1732 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Rxyl_1733 Phosphotransferase system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Rxyl_2297 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:rxy03070]
D Rxyl_1334 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rxyl_1335 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rxyl_2168 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rxyl_2002 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rxyl_2135 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rxyl_2322 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_3213 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_1621 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rxyl_1386 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rxyl_1387 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rxyl_1969 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Rxyl_1025 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Rxyl_1987 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D Rxyl_1968 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rxy02020]
D Rxyl_0378 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Rxyl_0308 Twin-arginine translocation pathway signal K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Rxyl_0310 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Rxyl_2782 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D Rxyl_2781 two component transcriptional regulator, winged helix family K07776 regX3; two-component system, OmpR family, response regulator RegX3
D Rxyl_0818 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rxyl_0667 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_0601 PDZ/DHR/GLGF K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_0403 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_1397 RNA polymerase, sigma 28 subunit K02405 fliA; RNA polymerase sigma factor FliA
D Rxyl_0243 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Rxyl_3136 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Rxyl_3135 conserved hypothetical membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D Rxyl_0242 integral membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D Rxyl_3134 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein
D Rxyl_0241 Twin-arginine translocation pathway signal K07795 tctC; putative tricarboxylic transport membrane protein
D Rxyl_2982 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Rxyl_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rxyl_2970 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Rxyl_2830 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Rxyl_0366 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Rxyl_1130 hypothetical protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Rxyl_1110 Malate dehydrogenase (oxaloacetate decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Rxyl_1205 respiratory nitrate reductase alpha subunit apoprotein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_1206 respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_1208 respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_1207 respiratory nitrate reductase chaperone NarJ K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D Rxyl_2810 putative signal transduction histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D Rxyl_1125 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1031 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_2498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_3196 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_2419 short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1158 Tfp pilus assembly protein PilE K02650 pilA; type IV pilus assembly protein PilA
D Rxyl_2076 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_1332 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_1201 cAMP-binding proteins K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_2796 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_2709 Cytochrome bd-type quinol oxidase subunit 1-like protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rxyl_2567 Cytochrome bd-type quinol oxidase subunit 1-like protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rxyl_2955 Cytochrome bd-type quinol oxidase subunit 1-like protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rxyl_2959 hypothetical protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rxyl_2075 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Rxyl_2626 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Rxyl_1270 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rxy02024]
D Rxyl_2115 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rxyl_2096 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Rxyl_0960 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rxyl_2032 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0193 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0363 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0362 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_2031 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_0194 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_2030 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rxyl_0195 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rxyl_2029 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_0196 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_0360 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_2028 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rxyl_2378 beta-lactamase-like protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D Rxyl_0540 beta-lactamase-like protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D Rxyl_3043 beta-lactamase-like protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D Rxyl_2060 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2458 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_1738 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2382 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_0371 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2076 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_1332 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_1201 cAMP-binding proteins K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_2796 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_1780 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Rxyl_1364 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rxyl_0866 Twin-arginine translocation pathway signal K15580 oppA; oligopeptide transport system substrate-binding protein
D Rxyl_0867 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Rxyl_0868 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Rxyl_0869 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Rxyl_0870 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Rxyl_2424 Twin-arginine translocation pathway signal K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rxyl_0872 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rxyl_3028 Twin-arginine translocation pathway signal K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rxyl_3026 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rxyl_2423 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rxyl_0873 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rxyl_2422 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rxyl_0874 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rxyl_3027 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rxyl_3025 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rxyl_0875 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rxyl_3024 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rxyl_0876 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rxyl_2322 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_3213 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_2168 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rxyl_2002 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rxyl_2135 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rxyl_1621 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rxyl_1386 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rxyl_1387 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D Rxyl_0948 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_3001 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_2603 Twin-arginine translocation pathway signal K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_0398 periplasmic sugar binding protein-like protein K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_1890 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:rxy02040]
D Rxyl_1008 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_2306 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_2634 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_1813 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_1231 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_0673 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_0879 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_1397 RNA polymerase, sigma 28 subunit K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Rxyl_0912 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rxy04980]
D Rxyl_0212 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rxyl_2533 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rxy01501]
D Rxyl_0629 beta-N-acetylhexosaminidase. Glycosyl Hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rxyl_1993 glycoside hydrolase, family 3-like protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rxyl_0866 Twin-arginine translocation pathway signal K15580 oppA; oligopeptide transport system substrate-binding protein
D Rxyl_0867 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Rxyl_0868 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Rxyl_0869 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Rxyl_0870 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Rxyl_1712 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Rxyl_2308 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rxyl_1138 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rxyl_1498 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rxy01502]
D Rxyl_2952 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rxyl_2329 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rxyl_0804 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rxyl_1497 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rxyl_1496 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rxyl_1493 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rxyl_2970 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rxy01503]
D Rxyl_2294 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rxyl_0667 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_0601 PDZ/DHR/GLGF K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_0403 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rxy01000]
C 01001 Protein kinases [BR:rxy01001]
D Rxyl_0021 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rxyl_2282 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rxyl_0943 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rxyl_0496 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rxyl_0184 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rxyl_0027 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rxyl_0729 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rxyl_0730 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rxyl_2974 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rxyl_2664 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rxyl_0560 Protein-tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D Rxyl_2782 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D Rxyl_2982 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Rxyl_0782 PAS/PAC sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Rxyl_2810 putative signal transduction histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D Rxyl_2612 GAF sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rxy01009]
D Rxyl_1998 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rxyl_0228 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rxyl_0024 protein serine/threonine phosphatases K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rxy01002]
D Rxyl_2818 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Rxyl_1154 peptidase A24A-like protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Rxyl_0816 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rxyl_1963 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Rxyl_3195 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Rxyl_2976 PgdS peptidase. Cysteine peptidase. MEROPS family C40 K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D Rxyl_0997 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rxyl_0341 glutamate synthase (NADH) large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D Rxyl_0799 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rxyl_0137 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rxyl_1220 ThiJ/PfpI K05520 yhbO; deglycase [EC:3.5.1.124]
D Rxyl_2045 Peptidase C56, PfpI K05520 yhbO; deglycase [EC:3.5.1.124]
D Rxyl_2899 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2421 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_1118 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_1137 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_1664 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_0338 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2542 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2937 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2799 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_1135 Abortive infection protein K07052 K07052; CAAX protease family protein
D Rxyl_0101 Abortive infection protein K07052 K07052; CAAX protease family protein
D Rxyl_2020 Abortive infection protein K07052 K07052; CAAX protease family protein
D Rxyl_2555 Abortive infection protein K07052 K07052; CAAX protease family protein
D Rxyl_3178 peptidase M3A and M3B, thimet/oligopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D Rxyl_1277 peptidase M6, immune inhibitor A K09607 ina; immune inhibitor A [EC:3.4.24.-]
D Rxyl_2970 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Rxyl_1124 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rxyl_0072 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rxyl_2475 acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rxyl_1635 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rxyl_0466 Peptidase M20D, amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D Rxyl_1854 Amidase, hydantoinase/carbamoylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Rxyl_0221 Amidase, hydantoinase/carbamoylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Rxyl_2745 Amidase, hydantoinase/carbamoylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D Rxyl_2133 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Rxyl_1906 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Rxyl_2862 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Rxyl_1168 peptidase M29, aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Rxyl_1098 carboxypeptidase Taq. Metallo peptidase. MEROPS family M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D Rxyl_2538 coagulation factor 5/8 type-like protein K01417 MEP; extracellular elastinolytic metalloproteinase [EC:3.4.24.-]
D Rxyl_2185 FtsH-2 peptidase. Metallo peptidase. MEROPS family M41 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rxyl_1806 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rxyl_0345 HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Rxyl_1405 Peptidase M50, putative membrane-associated zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Rxyl_1254 putative membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D Rxyl_0667 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_0601 PDZ/DHR/GLGF K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_0403 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_2188 peptidase S8 and S53, subtilisin, kexin, sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D Rxyl_2930 peptidase S8 and S53, subtilisin, kexin, sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-]
D Rxyl_2298 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rxyl_1537 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Rxyl_2954 peptidase S16, lon-like protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rxyl_1918 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rxyl_0250 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rxyl_0877 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rxyl_2001 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Rxyl_0697 signal peptide peptidase A. Serine peptidase. MEROPS family S49 K04773 sppA; protease IV [EC:3.4.21.-]
D Rxyl_1225 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D Rxyl_0295 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rxyl_1269 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:rxy01003]
D Rxyl_1180 conserved hypothetical protein K23683 aglD; glycosyltransferase AglD [EC:2.4.1.-]
D Rxyl_0793 putative GAF sensor protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Rxyl_2620 Phosphatidylinositol alpha-mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D Rxyl_0383 glycosyl transferase, group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D Rxyl_2627 glycosyl transferase, family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D Rxyl_2308 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rxyl_2668 glycosyl transferase, group 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D Rxyl_2691 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Rxyl_2872 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D Rxyl_2972 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Rxyl_2312 glycosyl transferase, family 2 K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
D Rxyl_1343 glycosyl transferase, family 2 K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rxy01005]
D Rxyl_0712 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Rxyl_0711 RfaE bifunctional protein, domain II K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rxy01011]
D Rxyl_1636 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rxyl_2807 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rxyl_1492 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rxyl_1495 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rxyl_2305 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rxyl_2952 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rxyl_2329 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rxyl_0804 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rxyl_1602 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Rxyl_1496 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rxyl_1493 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rxyl_1243 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rxyl_2604 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Rxyl_2308 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rxyl_1138 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rxyl_1498 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rxyl_0022 Peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D Rxyl_2298 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rxyl_2970 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Rxyl_2976 PgdS peptidase. Cysteine peptidase. MEROPS family C40 K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D Rxyl_2899 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2421 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_1118 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_1137 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_1664 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_0338 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2542 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2937 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2799 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Rxyl_2022 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rxyl_1361 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Rxyl_0749 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rxyl_0971 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rxyl_0313 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rxyl_2294 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rxy01004]
D Rxyl_1379 acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rxyl_3058 acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rxyl_1378 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rxyl_1383 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rxyl_1081 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rxyl_1381 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_3007 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2394 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2335 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2415 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_2740 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rxyl_1380 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rxyl_2000 lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Rxyl_0853 Enoyl-[acyl-carrier-protein] reductase (NADH) K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D Rxyl_0856 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1704 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1711 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_2531 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rxyl_1689 Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Rxyl_2342 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rxyl_1569 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rxyl_2060 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2458 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_1738 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2382 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_0371 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2339 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Rxyl_0353 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Rxyl_1377 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rxyl_2113 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rxyl_0390 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rxyl_1439 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rxy01008]
D Rxyl_1084 Chalcone and stilbene synthases-like protein K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D Rxyl_1085 Isoprenylcysteine carboxyl methyltransferase K16168 bpsB; methyltransferase
D Rxyl_1781 flavin reductase-like, FMN-binding protein K14631 actVB; flavin reductase ActVB [EC:1.5.1.-]
D Rxyl_0953 flavin reductase-like, FMN-binding protein K21185 sgcE6; flavin reductase
D Rxyl_2999 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:rxy01006]
D Rxyl_1456 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rxyl_2755 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rxyl_1402 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rxyl_0844 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rxyl_1428 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rxyl_1967 1,4-Dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:rxy01007]
D Rxyl_2180 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rxyl_2174 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_2856 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_1311 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rxyl_0275 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rxyl_2173 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rxyl_1659 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rxyl_2630 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rxyl_2428 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rxyl_1535 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rxyl_3202 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rxyl_1351 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rxyl_1340 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rxyl_0775 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Rxyl_1086 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rxyl_1087 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rxyl_1300 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rxyl_1359 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rxyl_1305 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rxyl_1306 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rxyl_0074 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Rxyl_0726 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rxyl_2888 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rxyl_2903 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rxyl_0412 aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D Rxyl_1975 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Rxyl_0760 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_3128 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rxyl_0923 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rxy00194]
D Rxyl_2712 Rieske (2Fe-2S) region K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D Rxyl_1194 ferredoxin K02639 petF; ferredoxin
D Rxyl_0435 ferredoxin K02639 petF; ferredoxin
D Rxyl_1637 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rxyl_1638 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rxyl_1639 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rxyl_1640 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rxyl_1641 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rxyl_1642 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rxyl_1643 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rxyl_1644 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rxyl_1646 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rxy03000]
D Rxyl_2232 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rxyl_2600 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rxyl_0945 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rxyl_0831 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rxyl_0630 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D Rxyl_3198 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Rxyl_2738 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Rxyl_0929 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rxyl_0554 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rxyl_0527 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rxyl_0539 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rxyl_1852 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rxyl_2589 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rxyl_3004 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rxyl_0136 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Rxyl_0787 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D Rxyl_1228 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rxyl_1224 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rxyl_1144 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rxyl_1140 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rxyl_2850 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Rxyl_1955 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Rxyl_2076 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_1332 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_1201 cAMP-binding proteins K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_2796 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rxyl_0860 transcriptional regulator, Crp/Fnr family K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D Rxyl_1234 transcriptional regulator, Crp/Fnr family K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D Rxyl_1803 transcriptional regulator, Crp/Fnr family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D Rxyl_0823 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Rxyl_2618 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Rxyl_2879 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Rxyl_0599 transcriptional regulator, TrmB / transcriptional regulator, ArsR family K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
D Rxyl_0595 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Rxyl_2059 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D Rxyl_2687 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D Rxyl_0653 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Rxyl_2609 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Rxyl_3182 CoA-binding protein K01926 rex; redox-sensing transcriptional repressor
D Rxyl_2304 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Rxyl_0132 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Rxyl_3209 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rxyl_0989 ParB-like nuclease K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225]
D Rxyl_1062 glycerol uptake operon antiterminator K02443 glpP; glycerol uptake operon antiterminator
D Rxyl_2884 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D Rxyl_1515 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Rxyl_2784 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Rxyl_0807 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Rxyl_1481 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rxyl_1313 transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rxyl_2875 Ribonucleotide reductase regulator NrdR-like protein K07738 nrdR; transcriptional repressor NrdR
D Rxyl_1501 protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rxy03021]
D Rxyl_2128 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rxyl_2162 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rxyl_2161 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rxyl_1472 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Rxyl_1008 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_2306 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_2634 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_1813 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_1231 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_0673 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_0879 RNA polymerase, sigma 28 subunit K03086 rpoD; RNA polymerase primary sigma factor
D Rxyl_0940 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rxyl_0863 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rxyl_2365 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rxyl_1710 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rxyl_1667 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rxyl_0900 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rxyl_1358 RNA polymerase, sigma 28 subunit K03090 sigB; RNA polymerase sigma-B factor
D Rxyl_1163 RNA polymerase, sigma 28 subunit K03090 sigB; RNA polymerase sigma-B factor
D Rxyl_1397 RNA polymerase, sigma 28 subunit K02405 fliA; RNA polymerase sigma factor FliA
D Rxyl_1410 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rxyl_1457 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rxyl_2167 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Rxyl_2673 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Rxyl_2671 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Rxyl_1691 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Rxyl_2804 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Rxyl_2974 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rxyl_2664 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rxyl_1313 transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rxyl_2181 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Rxyl_1655 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rxy03019]
D Rxyl_1384 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rxyl_1420 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Rxyl_1425 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Rxyl_1604 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rxyl_1988 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Rxyl_0912 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rxyl_1418 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rxyl_1655 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rxyl_0784 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Rxyl_0814 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rxyl_2935 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Rxyl_2803 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Rxyl_0806 metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Rxyl_2009 Uncharacterised P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:rxy03011]
D Rxyl_2024 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Rxyl_1398 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Rxyl_2149 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Rxyl_2129 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Rxyl_2138 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Rxyl_0849 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Rxyl_2159 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Rxyl_2141 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Rxyl_2120 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Rxyl_2156 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Rxyl_2130 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Rxyl_2160 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Rxyl_2131 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Rxyl_2142 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Rxyl_1417 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Rxyl_1388 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Rxyl_2146 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Rxyl_0850 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Rxyl_2151 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Rxyl_1517 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Rxyl_2165 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Rxyl_2152 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Rxyl_2155 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Rxyl_2154 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Rxyl_2143 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Rxyl_2140 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Rxyl_0851 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Rxyl_2164 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Rxyl_2166 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Rxyl_2163 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rxyl_2121 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Rxyl_2145 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Rxyl_2136 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Rxyl_2148 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Rxyl_2127 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Rxyl_2139 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Rxyl_1392 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Rxyl_1303 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Rxyl_1525 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Rxyl_2150 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Rxyl_2153 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Rxyl_2144 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Rxyl_1524 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Rxyl_1368 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Rxyl_2147 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Rxyl_2137 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Rxyl_1654 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Rxyl_1376 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Rxyl_2169 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Rxyl_3216 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Rxyl_1302 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Rxyl_0896 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Rxyl_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rxyl_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rxyl_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rxy03009]
D Rxyl_1384 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rxyl_1506 GTP-binding protein Era K03595 era; GTPase
D Rxyl_1523 Small GTP-binding protein domain K03979 obgE; GTPase [EC:3.6.5.-]
D Rxyl_1313 transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rxyl_1410 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rxyl_1457 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rxyl_2167 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Rxyl_0892 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Rxyl_1372 conserved hypothetical protein 95 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Rxyl_1513 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Rxyl_3211 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rxyl_1500 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Rxyl_0890 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Rxyl_1455 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Rxyl_2172 RNA methyltransferase TrmH, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Rxyl_1662 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Rxyl_0846 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Rxyl_0444 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Rxyl_1442 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Rxyl_1482 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Rxyl_0811 SSU ribosomal protein S18P alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Rxyl_1390 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Rxyl_1360 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Rxyl_1438 Small GTP-binding protein domain K03977 engA; GTPase
D Rxyl_1429 GTP-binding protein, HSR1-related K03665 hflX; GTPase
D Rxyl_1650 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rxyl_1338 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rxyl_1413 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Rxyl_1409 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Rxyl_0003 RNA-binding S4 K14761 rlbA; ribosome-associated protein
D Rxyl_1521 Iojap-related protein K09710 ybeB; ribosome-associated protein
D Rxyl_1509 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Rxyl_1622 sigma 54 modulation protein / SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor
D Rxyl_2193 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
D Rxyl_1375 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rxy03016]
D Rxyl_0480 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Rxyl_0479 protein of unknown function DUF101 K24956 ZBTB8OS; protein archease
D Rxyl_2174 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_2856 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_1087 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rxyl_2428 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rxyl_3202 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rxyl_2630 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rxyl_1659 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rxyl_1351 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rxyl_1359 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rxyl_0775 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Rxyl_1300 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rxyl_1086 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rxyl_2173 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rxyl_1535 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rxyl_1340 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rxyl_1305 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rxyl_1306 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rxyl_1311 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rxyl_0275 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rxyl_2291 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Rxyl_2571 Ala-tRNA(Pro) hydrolase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D Rxyl_0740 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rxyl_2026 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Rxyl_0597 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D Rxyl_2123 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Rxyl_1415 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Rxyl_0109 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_1353 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_1650 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rxyl_1428 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rxyl_1061 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Rxyl_3215 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Rxyl_R0001 rnpB; RNaseP RNA K01978 rnpB; M1 RNA
D Rxyl_3055 2',5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Rxyl_2180 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rxyl_2876 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Rxyl_1427 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Rxyl_2330 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Rxyl_1391 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Rxyl_1304 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Rxyl_1354 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rxyl_2772 HesB/YadR/YfhF K13628 iscA; iron-sulfur cluster assembly protein
D Rxyl_0323 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D Rxyl_0173 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D Rxyl_2617 putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Rxyl_1329 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Rxyl_2576 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rxyl_3176 Domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Rxyl_1330 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Rxyl_2806 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Rxyl_2187 tRNA(Ile)-lysidine synthetase-like protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Rxyl_0810 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Rxyl_0812 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Rxyl_0809 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Rxyl_1604 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rxyl_1418 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rxy03012]
D Rxyl_1411 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Rxyl_1301 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Rxyl_2293 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Rxyl_1399 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Rxyl_2157 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rxyl_2170 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rxyl_2318 Small GTP-binding protein domain K02355 fusA; elongation factor G
D Rxyl_2158 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Rxyl_1982 selenocysteine-specific translation elongation factor SelB K03833 selB; selenocysteine-specific elongation factor
D Rxyl_1652 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D Rxyl_1401 ribosome recycling factor K02838 frr; ribosome recycling factor
D Rxyl_1651 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Rxyl_0897 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Rxyl_2132 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D Rxyl_1458 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D Rxyl_1620 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rxy03110]
D Rxyl_2179 ATPase AAA-2 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Rxyl_0676 ATPase AAA-2 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Rxyl_0299 ATPase AAA-2 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Rxyl_1536 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Rxyl_0784 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Rxyl_0814 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rxyl_0786 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rxyl_1514 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rxyl_0785 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Rxyl_0672 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rxyl_3074 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rxyl_0675 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rxyl_2320 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rxyl_1010 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rxyl_2295 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rxyl_0667 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_0601 PDZ/DHR/GLGF K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_0403 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Rxyl_2185 FtsH-2 peptidase. Metallo peptidase. MEROPS family M41 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rxyl_1806 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rxyl_1644 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rxyl_2188 peptidase S8 and S53, subtilisin, kexin, sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D Rxyl_0911 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Rxyl_1831 thioredoxin K03671 TXN; thioredoxin
D Rxyl_1003 thioredoxin K03671 TXN; thioredoxin
D Rxyl_2296 thioredoxin K03671 TXN; thioredoxin
D Rxyl_2081 glutaredoxin K03676 grxC; glutaredoxin 3
D Rxyl_1250 glutaredoxin K03676 grxC; glutaredoxin 3
D Rxyl_1609 Glutaredoxin-like protein, YruB K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:rxy04131]
D Rxyl_1532 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rxyl_1314 arsenite-activated ATPase (arsA) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Rxyl_2051 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Rxyl_2541 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rxyl_2005 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rxyl_0913 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rxyl_0657 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Rxyl_0387 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rxy04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:rxy03032]
D Rxyl_2232 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rxyl_2301 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Rxyl_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rxyl_0852 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rxyl_0041 IstB-like ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Rxyl_1502 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rxyl_0045 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rxyl_1096 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rxyl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rxyl_1518 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rxyl_1961 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rxyl_2984 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rxyl_2444 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rxyl_1393 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Rxyl_0795 RNase HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D Rxyl_2025 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rxyl_0327 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rxyl_1835 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Rxyl_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rxyl_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rxyl_1964 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Rxyl_0752 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rxy03036]
D Rxyl_2232 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rxyl_1384 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rxyl_2541 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rxyl_2301 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Rxyl_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rxyl_1812 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein
D Rxyl_1385 SMC protein-like protein K03529 smc; chromosome segregation protein
D Rxyl_1444 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D Rxyl_1443 putative transcriptional regulator K06024 scpB; segregation and condensation protein B
D Rxyl_1490 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rxyl_0914 Septum formation initiator K05589 ftsB; cell division protein FtsB
D Rxyl_1606 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Rxyl_1498 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rxyl_1421 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Rxyl_1491 Polypeptide-transport-associated, FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Rxyl_1494 cell cycle protein K03588 ftsW; cell division protein FtsW
D Rxyl_1605 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Rxyl_1489 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rxyl_2294 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rxyl_1483 DivIVA K04074 divIVA; cell division initiation protein
D Rxyl_1486 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF
D Rxyl_1529 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rxyl_1528 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Rxyl_1526 cell cycle protein K05837 rodA; rod shape determining protein RodA
D Rxyl_3210 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Rxyl_3209 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rxyl_3211 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rxyl_2330 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Rxyl_1431 phage integrase K04763 xerD; integrase/recombinase XerD
D Rxyl_0339 phage integrase K04763 xerD; integrase/recombinase XerD
D Rxyl_1287 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rxyl_2006 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:rxy03400]
D Rxyl_0663 Deoxyribodipyrimidine photo-lyase type II K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Rxyl_1309 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Rxyl_2229 HhH-GPD K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Rxyl_2676 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rxyl_0700 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Rxyl_2554 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Rxyl_2787 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Rxyl_2622 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Rxyl_0808 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rxyl_0503 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rxyl_2949 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rxyl_1787 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rxyl_1215 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Rxyl_1786 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rxyl_2433 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rxyl_2550 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rxyl_1147 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Rxyl_2425 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Rxyl_0888 phosphoesterase, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rxyl_0327 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rxyl_2025 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rxyl_2016 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Rxyl_2021 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Rxyl_2010 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Rxyl_0825 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rxyl_2162 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rxyl_2161 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rxyl_2128 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rxyl_1472 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Rxyl_0909 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rxyl_0292 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Rxyl_0293 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rxyl_0034 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rxyl_1096 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rxyl_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rxyl_1518 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rxyl_1961 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rxyl_2984 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rxyl_2444 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rxyl_0045 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rxyl_1835 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Rxyl_1423 RecA protein K03553 recA; recombination protein RecA
D Rxyl_1323 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Rxyl_1324 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Rxyl_1322 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Rxyl_1469 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Rxyl_0448 SMC protein-like protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Rxyl_0449 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11
D Rxyl_2178 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Rxyl_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Rxyl_1371 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rxyl_1504 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Rxyl_0510 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D Rxyl_1453 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Rxyl_0257 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Rxyl_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rxyl_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rxyl_1964 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Rxyl_2301 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Rxyl_1918 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rxyl_1922 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D Rxyl_1424 regulatory protein RecX K03565 recX; regulatory protein
D Rxyl_0486 PHP-like protein K02347 polX; DNA polymerase (family X)
D Rxyl_0230 PHP-like protein K02347 polX; DNA polymerase (family X)
D Rxyl_2874 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rxyl_1414 phosphoesterase, RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rxy03029]
D Rxyl_1411 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Rxyl_1301 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Rxyl_1399 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Rxyl_2157 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rxyl_2170 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rxyl_2318 Small GTP-binding protein domain K02355 fusA; elongation factor G
D Rxyl_2158 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Rxyl_1506 GTP-binding protein Era K03595 era; GTPase
D Rxyl_1311 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rxyl_3202 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rxyl_1351 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rxyl_0775 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Rxyl_1659 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rxyl_0830 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rxyl_1878 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rxyl_0834 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rxyl_0829 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rxyl_0045 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rxyl_0784 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Rxyl_0785 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Rxyl_0814 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rxyl_2295 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rxyl_0786 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rxyl_1514 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rxyl_0109 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_1353 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_1287 protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rxyl_2322 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_3213 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rxy02000]
D Rxyl_2769 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Rxyl_0185 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Rxyl_2650 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rxyl_2651 NifC-like ABC-type porter K02018 modB; molybdate transport system permease protein
D Rxyl_1175 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rxyl_1174 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rxyl_1173 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Rxyl_2913 extracellular solute-binding protein, family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Rxyl_2915 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein
D Rxyl_2914 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D Rxyl_2912 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Rxyl_1557 Twin-arginine translocation pathway signal K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rxyl_2583 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rxyl_2582 Twin-arginine translocation pathway signal K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rxyl_2581 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rxyl_1556 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Rxyl_2584 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Rxyl_1555 glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Rxyl_2585 glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Rxyl_0580 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Rxyl_0982 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Rxyl_0983 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rxyl_0984 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rxyl_0578 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rxyl_0579 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rxyl_0577 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Rxyl_0985 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Rxyl_2085 hydroxymethylpyrimidine-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D Rxyl_2084 binding-protein-dependent transport systems inner membrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D Rxyl_3034 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rxyl_2083 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rxyl_1992 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rxyl_0621 extracellular solute-binding protein, family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Rxyl_0622 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Rxyl_0623 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Rxyl_0213 Twin-arginine translocation pathway signal K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Rxyl_1991 extracellular solute-binding protein, family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Rxyl_0062 extracellular solute-binding protein, family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D Rxyl_1990 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D Rxyl_1989 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D Rxyl_1681 putative secreted solute-binding lipoprotein K10559 rhaS; rhamnose transport system substrate-binding protein
D Rxyl_1683 inner-membrane translocator K10560 rhaP; rhamnose transport system permease protein
D Rxyl_1682 inner-membrane translocator K10561 rhaQ; rhamnose transport system permease protein
D Rxyl_1684 ABC transporter related K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D Rxyl_0948 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_3001 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_2603 Twin-arginine translocation pathway signal K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_0398 periplasmic sugar binding protein-like protein K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_1890 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D Rxyl_3002 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_0947 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_2602 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_0395 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_0396 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_1889 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rxyl_0946 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Rxyl_3003 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Rxyl_0397 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Rxyl_2071 Twin-arginine translocation pathway signal K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Rxyl_2070 binding-protein-dependent transport systems inner membrane component K17238 inoF; inositol-phosphate transport system permease protein
D Rxyl_2069 binding-protein-dependent transport systems inner membrane component K17239 inoG; inositol-phosphate transport system permease protein
D Rxyl_2068 ABC transporter related K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Rxyl_0155 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Rxyl_0157 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Rxyl_0158 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Rxyl_0156 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Rxyl_3005 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Rxyl_0069 Twin-arginine translocation pathway signal K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Rxyl_0669 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Rxyl_1721 periplasmic binding protein/LacI transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Rxyl_0550 conserved hypothetical protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Rxyl_1724 Twin-arginine translocation pathway signal K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Rxyl_1720 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D Rxyl_0549 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D Rxyl_1719 ABC transporter related K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rxyl_2601 ABC transporter related K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rxyl_0548 ABC transporter related K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rxyl_0818 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rxyl_0819 Phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D Rxyl_0820 Phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein
D Rxyl_0821 Phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Rxyl_2032 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0193 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0363 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rxyl_0362 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_2031 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_0194 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rxyl_2030 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rxyl_0195 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rxyl_2029 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_0196 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_0360 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rxyl_2028 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rxyl_0501 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Rxyl_0500 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K02029 ABC.PA.P; polar amino acid transport system permease protein
D Rxyl_0502 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Rxyl_0866 Twin-arginine translocation pathway signal K15580 oppA; oligopeptide transport system substrate-binding protein
D Rxyl_0867 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Rxyl_0868 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Rxyl_0869 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Rxyl_0870 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Rxyl_2424 Twin-arginine translocation pathway signal K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rxyl_0872 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rxyl_3028 Twin-arginine translocation pathway signal K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rxyl_3026 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rxyl_2423 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rxyl_0873 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rxyl_2422 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rxyl_0874 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rxyl_3027 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rxyl_3025 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rxyl_0875 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rxyl_3024 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rxyl_0876 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rxyl_0413 periplasmic binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D Rxyl_0418 Twin-arginine translocation pathway signal K25109 sirA; iron-siderophore transport system substrate-binding protein
D Rxyl_0419 periplasmic binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D Rxyl_0414 transport system permease protein K25110 sirB; iron-siderophore transport system permease protein
D Rxyl_0415 transport system permease protein K25111 sirC; iron-siderophore transport system permease protein
D Rxyl_0416 ABC transporter related K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D Rxyl_3164 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rxyl_2468 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Rxyl_1141 periplasmic solute binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D Rxyl_1143 ABC-3 K09819 ABC.MN.P; manganese/iron transport system permease protein
D Rxyl_1142 ABC transporter related K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D Rxyl_2901 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Rxyl_1893 signal transduction histidine kinase, LytS K16923 qrtT; energy-coupling factor transport system substrate-specific component
D Rxyl_0227 hypothetical protein K16928 mtaT; energy-coupling factor transport system substrate-specific component
D Rxyl_0226 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Rxyl_1894 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Rxyl_2124 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Rxyl_2470 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D Rxyl_2126 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_2472 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_2125 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_2471 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_1895 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_0225 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Rxyl_1116 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D Rxyl_1117 ABC transporter related K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Rxyl_0090 ABC-2 type transporter K25147 berB; beta-exotoxin I transport system permease protein
D Rxyl_0089 ABC transporter related K25148 berA; beta-exotoxin I transport system ATP-binding protein
D Rxyl_1605 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Rxyl_1606 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Rxyl_0438 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_0059 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_0406 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_0423 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_0755 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_1548 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_1743 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_2649 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_3116 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rxyl_0439 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_0066 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_0060 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_0405 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_0424 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_0754 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_1549 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_1742 daunorubicin resistance ABC transporter ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_2648 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_3117 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_3126 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rxyl_0847 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rxyl_0848 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rxyl_0171 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Rxyl_0150 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D Rxyl_0464 General substrate transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Rxyl_0467 General substrate transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D Rxyl_2344 major facilitator superfamily MFS_1 K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D Rxyl_0076 major facilitator superfamily MFS_1 K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D Rxyl_1587 major facilitator superfamily MFS_1 K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D Rxyl_1778 major facilitator superfamily MFS_1 K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D Rxyl_0374 major facilitator superfamily MFS_1 K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D Rxyl_1541 major facilitator superfamily MFS_1 K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D Rxyl_1563 major facilitator superfamily MFS_1 K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D Rxyl_1204 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Rxyl_0507 major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D Rxyl_1058 major facilitator superfamily MFS_1 K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D Rxyl_1226 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Rxyl_0657 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Rxyl_0387 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Rxyl_2255 General substrate transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D Rxyl_1875 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Rxyl_1734 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Rxyl_1735 HPrNtr domain containing protein K02784 ptsH; phosphocarrier protein HPr
D Rxyl_1732 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Rxyl_1733 Phosphotransferase system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D Rxyl_1068 Dihydroxyacetone kinase, subunit phosphotransferase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D Rxyl_1065 MIP family channel proteins K02440 glpF; glycerol uptake facilitator
D Rxyl_1342 Ion transport protein K10716 kch; voltage-gated potassium channel
D Rxyl_2018 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Rxyl_0239 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rxyl_2953 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Rxyl_1045 MgtE integral membrane region K07244 K07244; mgtE-like transporter
D Rxyl_0057 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Rxyl_3065 Mg2+ transporter protein, CorA-like protein K03284 corA; magnesium transporter
D Rxyl_0522 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D Rxyl_0523 Camphor resistance CrcB protein K06199 crcB; fluoride exporter
D Rxyl_1772 hypothetical protein K19059 merE; mercuric ion transport protein
D Rxyl_2895 protein of unknown function DUF1211 K24915 TMEM175; TMEM175 potassium channel family protein
D Rxyl_2767 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rxyl_1072 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rxyl_2522 amino acid permease-associated region K16238 eat; ethanolamine permease
D Rxyl_3197 Ethanolamine permease K16238 eat; ethanolamine permease
D Rxyl_0594 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Rxyl_0655 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Rxyl_0084 putative metal cation transporter K07238 TC.ZIP; zinc transporter, ZIP family
D Rxyl_2825 putative integral membrane protein K07238 TC.ZIP; zinc transporter, ZIP family
D Rxyl_3064 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Rxyl_1319 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D Rxyl_0281 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Rxyl_0189 protein of unknown function DUF6, transmembrane K03298 TC.DME; drug/metabolite transporter, DME family
D Rxyl_3168 protein of unknown function DUF6, transmembrane K11939 rhtA; inner membrane transporter RhtA
D Rxyl_1264 L-lactate permease K03303 lutP; lactate permease
D Rxyl_0757 choline/carnitine/betaine transport K05020 opuD; glycine betaine transporter
D Rxyl_2573 calcium/proton exchanger K07300 chaA; Ca2+:H+ antiporter
D Rxyl_3053 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter
D Rxyl_0143 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter
D Rxyl_1539 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D Rxyl_1271 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D Rxyl_1274 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D Rxyl_1272 TrkA-N K03499 trkA; trk/ktr system potassium uptake protein
D Rxyl_1273 TrkA-N K03499 trkA; trk/ktr system potassium uptake protein
D Rxyl_2840 uracil-xanthine permease K24206 uacT; uric acid transporter
D Rxyl_2962 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Rxyl_2688 Chromate transporter K07240 chrA; chromate transporter
D Rxyl_1611 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D Rxyl_0654 NRAMP family Mn2+/Fe2+ transporters K03322 mntH; manganese transport protein
D Rxyl_1314 arsenite-activated ATPase (arsA) K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Rxyl_1047 Arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D Rxyl_1800 NADH dehydrogenase (quinone) K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D Rxyl_3147 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Rxyl_1799 NADH-ubiquinone oxidoreductase, chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Rxyl_1798 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Rxyl_1797 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Rxyl_3142 Na+/H+ antiporter subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Rxyl_2604 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Rxyl_0243 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Rxyl_3136 protein of unknown function DUF112, transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Rxyl_3135 conserved hypothetical membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D Rxyl_0242 integral membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D Rxyl_3134 Uncharacterized protein UPF0065 K07795 tctC; putative tricarboxylic transport membrane protein
D Rxyl_0241 Twin-arginine translocation pathway signal K07795 tctC; putative tricarboxylic transport membrane protein
D Rxyl_2546 protein of unknown function DUF125, transmembrane K22737 mbfA; erythrin-vacuolar iron transport family protein
D Rxyl_0955 multiple antibiotic resistance (MarC)-related proteins K05595 marC; multiple antibiotic resistance protein
D Rxyl_1494 cell cycle protein K03588 ftsW; cell division protein FtsW
D Rxyl_1177 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D Rxyl_1571 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Rxyl_1825 cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Rxyl_1774 cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Rxyl_1205 respiratory nitrate reductase alpha subunit apoprotein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_1206 respiratory nitrate reductase beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_1208 respiratory nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Rxyl_1944 lipopolysaccharide biosynthesis K19420 epsA; protein tyrosine kinase modulator
D Rxyl_0560 Protein-tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D Rxyl_2934 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Rxyl_2844 Transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:rxy02044]
D Rxyl_1154 peptidase A24A-like protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Rxyl_1158 Tfp pilus assembly protein PilE K02650 pilA; type IV pilus assembly protein PilA
D Rxyl_1166 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Rxyl_1164 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Rxyl_1465 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Rxyl_1464 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN
D Rxyl_1463 Tfp pilus assembly protein PilO-like protein K02664 pilO; type IV pilus assembly protein PilO
D Rxyl_1165 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Rxyl_1167 twitching motility protein K02669 pilT; twitching motility protein PilT
D Rxyl_1484 protein of unknown function YGGT K02221 yggT; YggT family protein
D Rxyl_1520 Competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA
D Rxyl_1647 CMP/dCMP deaminase, zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Rxyl_1519 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Rxyl_0044 beta-lactamase-like protein K02238 comEC; competence protein ComEC
D Rxyl_1621 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rxyl_1334 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rxyl_2168 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rxyl_1335 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rxyl_2002 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rxyl_2135 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rxyl_1387 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rxyl_1386 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rxyl_2322 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_3213 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rxyl_1969 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Rxyl_1025 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Rxyl_1987 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB
D Rxyl_1968 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rxy02042]
D Rxyl_2767 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rxyl_1072 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rxy02022]
D Rxyl_0378 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Rxyl_2782 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D Rxyl_2781 two component transcriptional regulator, winged helix family K07776 regX3; two-component system, OmpR family, response regulator RegX3
D Rxyl_2982 multi-sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Rxyl_0782 PAS/PAC sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Rxyl_2211 response regulator receiver protein K02483 K02483; two-component system, OmpR family, response regulator
D Rxyl_2810 putative signal transduction histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D Rxyl_2612 GAF sensor signal transduction histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:rxy02035]
D Rxyl_1397 RNA polymerase, sigma 28 subunit K02405 fliA; RNA polymerase sigma factor FliA
D Rxyl_1165 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Rxyl_1167 twitching motility protein K02669 pilT; twitching motility protein PilT
D Rxyl_1158 Tfp pilus assembly protein PilE K02650 pilA; type IV pilus assembly protein PilA
D Rxyl_1166 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Rxyl_1164 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Rxyl_1154 peptidase A24A-like protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Rxyl_1463 Tfp pilus assembly protein PilO-like protein K02664 pilO; type IV pilus assembly protein PilO
D Rxyl_1464 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN
D Rxyl_1465 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rxy04812]
D Rxyl_1529 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rxyl_1489 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rxyl_1490 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rxyl_3210 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Rxyl_3209 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rxy04147]
D Rxyl_2541 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rxyl_0912 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rxyl_2005 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rxyl_0913 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rxyl_0814 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rxyl_0784 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Rxyl_2677 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rxyl_0815 IMP dehydrogenase related 2 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rxyl_2157 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rxyl_2170 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rxyl_0740 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rxyl_2060 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2458 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_1738 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_2382 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_0371 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rxyl_0336 selenium-binding protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D Rxyl_2389 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_2530 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_1842 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rxyl_3178 peptidase M3A and M3B, thimet/oligopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D Rxyl_1998 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rxyl_0228 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rxyl_2134 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rxyl_1432 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Rxyl_0979 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rxyl_2882 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rxyl_1038 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Rxyl_2746 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Rxyl_0219 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Rxyl_0316 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Rxyl_1063 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Rxyl_1125 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1031 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_2498 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_3196 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rxyl_1976 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rxyl_2043 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Rxyl_0837 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rxyl_1000 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rxyl_2549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rxyl_0051 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Rxyl_2003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rxy02048]
D Rxyl_0257 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Rxyl_0256 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Rxyl_0267 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Rxyl_0266 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Rxyl_0271 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Rxyl_0270 CRISPR-associated protein, Csh1 family K19114 csh1; CRISPR-associated protein Csh1
D Rxyl_0269 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D Rxyl_0268 CRISPR-associated protein, Cas5h family K19116 cas5h; CRISPR-associated protein Cas5h
D Rxyl_0264 CRISPR-associated protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D Rxyl_0263 CRISPR-associated protein, Cmr2 family K19076 cmr2; CRISPR-associated protein Cmr2
D Rxyl_0262 conserved hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3
D Rxyl_0261 CRISPR-associated protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Rxyl_0260 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D Rxyl_0259 CRISPR-associated protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D Rxyl_1835 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Rxyl_3157 DNA methylase N-4/N-6 K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Rxyl_2232 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rxyl_0807 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Rxyl_1489 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rxyl_1529 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rxyl_2174 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_2856 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rxyl_0109 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rxyl_1353 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:rxy04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rxy04090]
D Rxyl_3178 peptidase M3A and M3B, thimet/oligopeptidase F K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:rxy01504]
D Rxyl_1058 major facilitator superfamily MFS_1 K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D Rxyl_1712 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Rxyl_2970 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:rxy00536]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rxy00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rxy03100]
D Rxyl_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rxyl_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rxyl_R0052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rxyl_R0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rxyl_R0049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rxyl_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rxyl_R0006 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rxyl_R0027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rxyl_R0016 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rxyl_R0020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rxyl_R0010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rxyl_R0005 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rxyl_R0014 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rxyl_R0061 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rxyl_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rxyl_R0032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rxyl_R0002 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rxyl_R0030 tRNA-His K14226 tRNA-His; tRNA His
D Rxyl_R0054 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rxyl_R0038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0003 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rxyl_R0013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rxyl_R0058 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rxyl_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rxyl_R0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rxyl_R0045 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rxyl_R0017 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rxyl_R0050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rxyl_R0012 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rxyl_R0033 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rxyl_R0059 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rxyl_R0008 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rxyl_R0062 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rxyl_R0056 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rxyl_R0042 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rxyl_R0035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rxyl_R0044 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rxyl_R0040 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rxyl_R0043 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rxyl_R0046 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rxyl_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rxyl_R0021 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rxyl_R0036 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D Rxyl_R0022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rxyl_R0023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rxyl_R0024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rxyl_R0053 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Rxyl_R0001 rnpB; RNaseP RNA K01978 rnpB; M1 RNA
D Rxyl_R0034 ssrA; ssrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Rxyl_2988 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D Rxyl_3050 Pyruvate dehydrogenase (lipoamide) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D Rxyl_2403 Pyruvate dehydrogenase (lipoamide) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D Rxyl_2404 Transketolase, central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Rxyl_3049 Transketolase-like protein K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Rxyl_0349 Transketolase, central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Rxyl_0217 luciferase-like protein K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D Rxyl_2381 iron-containing alcohol dehydrogenase K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24]
D Rxyl_0111 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Rxyl_2837 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Rxyl_0113 molybdopterin dehydrogenase, FAD-binding protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Rxyl_1874 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rxyl_1872 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rxyl_0112 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rxyl_2551 TENA/THI-4 protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D Rxyl_3154 Radical SAM K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26]
D Rxyl_1294 geranylgeranyl reductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D Rxyl_2482 butyryl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D Rxyl_3151 (S)-2-hydroxy-acid oxidase K24693 mftD; pre-mycofactocin synthase [EC:1.4.3.26]
D Rxyl_1793 reduced coenzyme F420:NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D Rxyl_1151 FAD dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D Rxyl_0942 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rxyl_2398 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rxyl_0207 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rxyl_0692 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rxyl_0936 Alcohol dehydrogenase, zinc-binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rxyl_2921 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D Rxyl_2864 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Rxyl_0660 Protein-methionine-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Rxyl_0300 glutathione S-transferase-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Rxyl_2008 glutathione S-transferase-like protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D Rxyl_0681 manganese containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D Rxyl_1775 Redoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Rxyl_0142 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Rxyl_2039 hypothetical protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D Rxyl_1155 conserved hypothetical protein K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39]
D Rxyl_0408 L-lysine 6-monooxygenase (NADPH) K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D Rxyl_2778 Ferritin and Dps K02217 ftnA; ferritin [EC:1.16.3.2]
D Rxyl_2878 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Rxyl_1185 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Rxyl_0277 Methyltransferase type 11 K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D Rxyl_0717 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D Rxyl_1076 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Rxyl_3054 phosphoribosylaminoimidazole carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D Rxyl_1139 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Rxyl_2989 conserved hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D Rxyl_0777 2-Phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D Rxyl_1369 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Rxyl_2177 protein of unknown function DUF147 K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D Rxyl_1053 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Rxyl_2350 conserved hypothetical protein K21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37]
D Rxyl_1946 hypothetical protein K22905 stf3; omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase [EC:2.8.2.40]
D Rxyl_1698 succinyl-CoA:(R)-citramalate CoA-transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D Rxyl_0659 Appr-1-p processing K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Rxyl_2367 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rxyl_3160 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rxyl_2027 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rxyl_2932 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Rxyl_1805 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Rxyl_1510 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Rxyl_0891 Sec-independent protein translocase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Rxyl_2044 nuclease (SNase-like) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D Rxyl_2262 nuclease (SNase-like) K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D Rxyl_0705 glycoside hydrolase, family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D Rxyl_0070 glycoside hydrolase, family 38 K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D Rxyl_3150 Creatininase K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14]
D Rxyl_1468 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Rxyl_2742 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Rxyl_1347 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Rxyl_1263 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Rxyl_2838 amidohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D Rxyl_2775 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Rxyl_3152 ATPase associated with various cellular activities, AAA_5 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Rxyl_1930 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D Rxyl_0791 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Rxyl_1671 UV-damage endonuclease K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D Rxyl_1697 hydroxymethylglutaryl-CoA lyase K18314 E4.1.3.46; (R)-citramalyl-CoA lyase [EC:4.1.3.46]
D Rxyl_0802 YjeF-related protein-like protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Rxyl_3023 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D Rxyl_1079 conserved hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D Rxyl_0176 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Rxyl_0236 carboxyl transferase K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D Rxyl_1657 cyclic 2,3-diphosphoglycerate-synthetase K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9]
D Rxyl_1195 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Rxyl_3059 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Rxyl_3077 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Rxyl_0593 Heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D Rxyl_1801 Heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Rxyl_0937 CBS domain containing membrane protein K04767 acuB; acetoin utilization protein AcuB
D Rxyl_1013 CBS domain containing membrane protein K04767 acuB; acetoin utilization protein AcuB
D Rxyl_1014 histone deacetylase superfamily K04768 acuC; acetoin utilization protein AcuC
D Rxyl_2995 protein of unknown function DUF224, cysteine-rich region K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Rxyl_2994 Iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Rxyl_2993 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D Rxyl_2062 Alcohol dehydrogenase, zinc-binding protein K13955 yogA; zinc-binding alcohol dehydrogenase/oxidoreductase
D Rxyl_0145 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D Rxyl_0165 SUF system FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Rxyl_2194 SUF system FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Rxyl_0977 nitrogen-fixing NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Rxyl_3133 fumarate reductase/succinate dehydrogenase flavoprotein-like protein K13796 cobZ; tricarballylate dehydrogenase
D Rxyl_1776 amino acid-binding ACT K06862 ehbQ; energy-converting hydrogenase B subunit Q
D Rxyl_1669 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
D Rxyl_1370 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Rxyl_2309 aminotransferase, class V K11325 K11325; L-cysteine/cystine lyase
D Rxyl_1487 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Rxyl_2377 conserved hypothetical protein 374 K07027 K07027; glycosyltransferase 2 family protein
D Rxyl_0384 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Rxyl_2758 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Rxyl_3149 glycosyl transferase, family 2 K24698 mftF; mycofactocin glycosyltransferase
C 99987 Cofactor metabolism
D Rxyl_1337 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Rxyl_2201 ABC-1 K03688 ubiB; ubiquinone biosynthesis protein
D Rxyl_3155 hypothetical protein K24695 mftB; mycofactocin biosynthesis protein MftB
C 99988 Secondary metabolism
C 99999 Others
D Rxyl_0447 Alkaline phosphatase K22390 ACP7; acid phosphatase type 7
D Rxyl_1055 Glyoxalase/bleomycin resistance protein/dioxygenase K15975 K15975; glyoxalase family protein
D Rxyl_1057 Glyoxalase/bleomycin resistance protein/dioxygenase K15975 K15975; glyoxalase family protein
D Rxyl_0907 DoxX K15977 K15977; putative oxidoreductase
D Rxyl_1048 DoxX K15977 K15977; putative oxidoreductase
D Rxyl_1054 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D Rxyl_2544 CoA-binding protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Rxyl_0290 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Rxyl_0175 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Rxyl_0732 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D Rxyl_1015 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Rxyl_2055 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Rxyl_1538 trigger factor K03545 tig; trigger factor
D Rxyl_1603 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Rxyl_1395 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D Rxyl_0117 predicted sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Rxyl_1791 adenine-specific DNA methylase containing a Zn-ribbon-like protein K07445 K07445; putative DNA methylase
D Rxyl_1530 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Rxyl_1396 DNA processing protein DprA, putative K04096 smf; DNA processing protein
D Rxyl_1040 Recombination protein MgsA K07478 ycaJ; putative ATPase
D Rxyl_1861 transposase IS3/IS911 K07483 K07483; transposase
D Rxyl_2226 transposase IS3/IS911 K07483 K07483; transposase
D Rxyl_1592 phage integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D Rxyl_0332 hypothetical protein K03969 pspA; phage shock protein A
D Rxyl_0509 conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Rxyl_2924 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Rxyl_2013 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Rxyl_3158 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rxyl_2906 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rxyl_2048 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rxyl_0575 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rxyl_2834 NCS1 nucleoside transporter family K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Rxyl_0222 NCS1 nucleoside transporter family K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Rxyl_3052 permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Rxyl_0460 permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D Rxyl_1188 protein of unknown function DUF542, ScdA-like protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D Rxyl_3212 single-stranded nucleic acid binding R3H K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D Rxyl_0422 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Rxyl_1511 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
C 99994 Others
D Rxyl_0822 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Rxyl_0291 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Rxyl_2785 ChaB K06197 chaB; cation transport regulator
D Rxyl_0511 DEAD/DEAH box helicase-like protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D Rxyl_3199 Secretion chaperone CsaA K06878 K06878; tRNA-binding protein
D Rxyl_0170 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Rxyl_0168 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Rxyl_2560 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D Rxyl_1912 nuclease (SNase-like) K07038 K07038; inner membrane protein
D Rxyl_2340 uncharacterized domain HDIG K07048 PTER; phosphotriesterase-related protein
D Rxyl_1408 ribonuclease BN, putative K07058 K07058; membrane protein
D Rxyl_0751 ribonuclease BN, putative K07058 K07058; membrane protein
D Rxyl_0481 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D Rxyl_0344 LemA K03744 lemA; LemA protein
D Rxyl_1610 protein of unknown function DUF202 K00389 yidH; putative membrane protein
D Rxyl_0664 protein of unknown function DUF202 K00389 yidH; putative membrane protein
D Rxyl_0446 membrane-flanked domain K08981 K08981; putative membrane protein
D Rxyl_3081 conserved hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D Rxyl_2641 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D Rxyl_2540 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Rxyl_2331 conserved hypothetical protein K06889 K06889; uncharacterized protein
D Rxyl_2440 peptidase S15 K06889 K06889; uncharacterized protein
D Rxyl_0385 conserved hypothetical protein K06889 K06889; uncharacterized protein
D Rxyl_0091 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Rxyl_1672 CoA-binding protein K06929 K06929; uncharacterized protein
D Rxyl_2721 protein of unknown function DUF296 K06934 K06934; uncharacterized protein
D Rxyl_3163 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D Rxyl_1389 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D Rxyl_2171 protein of unknown function DUF901 K06962 K06962; uncharacterized protein
D Rxyl_2319 peptidase, membrane zinc metallopeptidase, putative K06973 K06973; uncharacterized protein
D Rxyl_0858 peptidase, membrane zinc metallopeptidase, putative K06973 K06973; uncharacterized protein
D Rxyl_2383 peptidase S15 K06978 K06978; uncharacterized protein
D Rxyl_2359 X-Pro dipeptidyl-peptidase-like protein K06978 K06978; uncharacterized protein
D Rxyl_2397 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D Rxyl_2364 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein K07006 K07006; uncharacterized protein
D Rxyl_2722 conserved hypothetical protein K07034 K07034; uncharacterized protein
D Rxyl_0019 beta-lactamase-like protein K07041 K07041; uncharacterized protein
D Rxyl_0376 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Rxyl_0533 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Rxyl_1073 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Rxyl_1956 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Rxyl_1757 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Rxyl_2657 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Rxyl_3033 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Rxyl_0724 conserved hypothetical protein K07071 K07071; uncharacterized protein
D Rxyl_0741 fumarate reductase/succinate dehydrogenase flavoprotein-like protein K07077 K07077; uncharacterized protein
D Rxyl_2348 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rxyl_0968 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rxyl_1829 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rxyl_0506 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rxyl_0248 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rxyl_0249 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rxyl_0309 Twin-arginine translocation pathway signal K07093 K07093; uncharacterized protein
D Rxyl_0772 conserved hypothetical protein K07096 K07096; uncharacterized protein
D Rxyl_1333 conserved putative protein K07096 K07096; uncharacterized protein
D Rxyl_1617 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein
D Rxyl_1618 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein
D Rxyl_0951 protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein
D Rxyl_1670 Putative ammonia monooxygenase-like protein K07120 K07120; uncharacterized protein
D Rxyl_2217 Roadblock/LC7 K07131 K07131; uncharacterized protein
D Rxyl_1278 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D Rxyl_0115 VWA containing CoxE-like protein K07161 K07161; uncharacterized protein
D Rxyl_3214 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Rxyl_2460 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Rxyl_2570 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Rxyl_0915 conserved hypothetical protein K09009 K09009; uncharacterized protein
D Rxyl_1512 GatB/Yqey K09117 K09117; uncharacterized protein
D Rxyl_2621 protein of unknown function DUF82 K09122 K09122; uncharacterized protein
D Rxyl_0521 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Rxyl_0518 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Rxyl_0445 membrane-flanked domain K09167 K09167; uncharacterized protein
D Rxyl_1865 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D Rxyl_0119 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D Rxyl_2883 conserved hypothetical protein K09707 K09707; uncharacterized protein
D Rxyl_1995 protein of unknown function DUF790 K09744 K09744; uncharacterized protein
D Rxyl_2442 protein of unknown function DUF309 K09763 K09763; uncharacterized protein
D Rxyl_1412 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D Rxyl_0153 hypothetical protein K09766 K09766; uncharacterized protein
D Rxyl_1078 protein of unknown function DUF456 K09793 K09793; uncharacterized protein
D Rxyl_2816 hypothetical protein K09940 K09940; uncharacterized protein
D Rxyl_0497 hypothetical protein K09940 K09940; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 9, 2024