+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Streptococcus agalactiae 09mas018883

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D BSA_8130 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C BSA_15750 GTP-binding protein Era K03595 era; GTPase C BSA_15490 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C BSA_4580 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA C BSA_17510 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB C BSA_20480 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D BSA_8900 Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D BSA_15540 Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D BSA_18500 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BSA_3920 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D BSA_10120 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BSA_5420 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BSA_19910 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BSA_16890 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BSA_3610 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BSA_16360 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BSA_5870 RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D BSA_18490 Ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D BSA_2670 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB ## LSU rRNA Gm2251 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BSA_21880 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BSA_14610 LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D BSA_5480 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BSA_5870 RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BSA_6550 23S rRNA (Uracil-5-)-methyltransferase RumA ## LSU rRNA m(5)U1939 K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D BSA_16550 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BSA_20550 Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BSA_14460 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BSA_11620 Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C BSA_18290 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C BSA_3300 acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C BSA_14340 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C BSA_19920 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C BSA_8130 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C BSA_20780 Putative Holliday junction resolvase YggF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C BSA_2660 COG1939: Ribonuclease III family protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C BSA_8660 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C BSA_3650 ATP-dependent RNA helicase YqfR K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C BSA_15750 GTP-binding protein Era K03595 era; GTPase C BSA_18480 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C BSA_16800 GTP-binding protein EngA K03977 engA; GTPase C BSA_15490 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-] C BSA_10830 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF) K14540 rbgA; ribosome biogenesis GTPase A C BSA_12900 GTP-binding protein HflX K03665 hflX; GTPase C BSA_17220 GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C BSA_11450 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C BSA_19570 GTP pyrophosphokinase, (p)ppGpp synthetase I K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C BSA_4620 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C BSA_4570 FIG000325: clustered with transcription termination protein NusA K09748 rimP; ribosome maturation factor RimP C BSA_21670 FIG002958: hypothetical protein K14761 rlbA; ribosome-associated protein C BSA_17170 Iojap protein K09710 ybeB; ribosome-associated protein C BSA_15770 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly K07042 ybeY; probable rRNA maturation factor C BSA_17210 FIG004454: RNA binding protein K07574 yhbY; RNA-binding protein C BSA_4130 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor C BSA_60 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase C BSA_16860 COG1399 protein in cluster with ribosomal protein L32p, Firmicutes subfamily K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024