+D Messenger RNA Biogenesis KO
#
Prokaryotic Defense System - Salmonella enterica subsp. enterica serovar Typhimurium DT2
%
!
ACRISPR-Cas system
B Universal Cas proteins
C STMDT2_28381 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
C STMDT2_28371 ygbF; conserved hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D STMDT2_28441 conserved hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D STMDT2_28431 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D STMDT2_28421 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D STMDT2_28411 hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC
D STMDT2_28401 hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD
D STMDT2_28391 conserved hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
#
ARestriction and modification system (R-M system)
B Type I R-M system
C STMDT2_43741 unnamed protein product K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C STMDT2_43721 unnamed protein product K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C STMDT2_43731 unnamed protein product K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D STMDT2_33711 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STMDT2_32791 yhdJ; putative adenine-specific DNA-modification methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D STMDT2_p00063 yhdJ; Adenine-specific methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D STMDT2_19151 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
C STMDT2_03541 res; type III restriction-modification system enzyme (StyLTI) K01156 res; type III restriction enzyme [EC:3.1.21.5]
C STMDT2_03531 mod; 2 type III restriction-modification system enzyme (StyLTI) modification methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
C STMDT2_19491 phage protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
C STMDT2_43751 unnamed protein product K07448 mrr; restriction system protein
C STMDT2_43351 putative restriction endonuclease K07448 mrr; restriction system protein
#
AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
D STMDT2_02911 hypothetical protein K19048 symE; toxic protein SymE
D STMDT2_43711 unnamed protein product K19048 symE; toxic protein SymE
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D STMDT2_42961 relE; conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D STMDT2_14761 unnamed protein product K06218 relE; mRNA interferase RelE/StbE
D STMDT2_42951 relB; RelB protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D STMDT2_14771 unnamed protein product K18923 stbD; antitoxin StbD
C YafQ-dinJ
D STMDT2_34031 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D STMDT2_34041 conserved hypothetical protein (homologue of DnaJ: DNA damage inducible protein) K07473 dinJ; DNA-damage-inducible protein J
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
D STMDT2_04691 hha; haemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D STMDT2_04701 ybaJ; conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D STMDT2_16111 pspC; phage shock protein C K03973 pspC; phage shock protein C
D STMDT2_16121 pspB; phage shock protein B K03970 pspB; phage shock protein B
C CcdB-CcdA
D STMDT2_p00027 ccdB; CcdB toxin protein K19163 ccdB; toxin CcdB
D STMDT2_p00026 ccdA; CcdA protein (antitoxin to CcdB) K19164 ccdA; antitoxin CcdA
C ParE-ParD
D STMDT2_28561 putative DNA stabilisation protein K19092 parE1_3_4; toxin ParE1/3/4
D STMDT2_28571 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
D STMDT2_34441 kil; death on curing protein K07341 doc; death on curing protein
D STMDT2_34451 phd; prevent host death protein K19165 phd; antitoxin Phd
C HigB-HigA
D STMDT2_38911 ygjN; conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D STMDT2_38901 ygjM; conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
C MqsR-MqsA
C VapC-VapB
D STMDT2_29311 hypothetical protein (assiciated with virulence) K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D STMDT2_p00112 vapC; MvpA-like protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D STMDT2_29321 hypothetical protein (assiciated with virulence) K18829 mvpT; antitoxin VapB
D STMDT2_p00113 vapB; putative cytoplasmic protein K18829 mvpT; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D STMDT2_43141 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D STMDT2_10951 conserved hypothetical protein K12148 bssS; biofilm regulator BssS
D STMDT2_08291 conserved hypothetical protein K19688 bssR; biofilm regulator BssR
D STMDT2_11491 putative secreted protein K12151 bhsA; multiple stress resistance protein BhsA
D STMDT2_01351 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D STMDT2_32661 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D STMDT2_30681 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D STMDT2_30751 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D STMDT2_23811 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D STMDT2_29421 conserved hypothetical protein K19168 cptA; toxin CptA
D STMDT2_29431 conserved hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
#
ADNA phosphothiolation system
B Sulfur modification proteins
C STMDT2_25041 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023