+D
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Transfer RNA Biogenesis - Schistosoma haematobium (urinary blood fluke)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D MS3_00005617 POP1; Ribonucleases P/MRP protein subunit pop1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D MS3_00007142 POP5; RNA-binding protein pop5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D MS3_00007855 RPP30; Ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D MS3_00008779 hypothetical protein K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D MS3_00009209 hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D MS3_00010314 ELAC2_2; Zinc phosphodiesterase ELAC protein 2 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D MS3_00002377 NAA38; N(alpha)-acetyltransferase 38, NatC auxiliary, variant 2 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
D MS3_00005153 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D MS3_00006252 hypothetical protein K15433 CGI99; RLL motif containing protein 1
D MS3_00010495 DDX1; ATP-dependent RNA helicase ddx1 K13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
D MS3_00004063 ZBTB8OS; Protein archease K24956 ZBTB8OS; protein archease
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
D MS3_00003318 hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran
D MS3_00006928 hypothetical protein K14288 XPOT; exportin-T
D MS3_00001476 XPO1_1; Exportin-1, variant 2 K14290 XPO1; exportin-1
D MS3_00002114 EEF1A1_1; Elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
D MS3_00001742 SCYL1; N-terminal kinase-like protein K08876 SCYL1; SCY1-like protein 1
D MS3_00008976 DGP-1; Short integuments 2, mitochondrial K24887 GTPBP1; GTP-binding protein 1
C tRNA import factors
D MS3_00003599 TNPO3; Transportin-3 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D MS3_00008645 EPRS1_1; Bifunctional glutamate/proline--tRNA ligase K14163 EPRS; bifunctional glutamyl/prolyl-tRNA synthetase [EC:6.1.1.17 6.1.1.15]
D MS3_00006519 EARS2; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D MS3_00003765 PARS2_1; prolyl-tRNA synthetase, variant 2 K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D MS3_00009608 IARS1_1; Isoleucine--tRNA ligase, cytoplasmic, variant 3 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MS3_00006432 IARS2_1; Isoleucine--tRNA ligase, mitochondrial, variant 3 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MS3_00006004 LARS2_1; putative leucine--tRNA ligase, mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MS3_00008445 MARS2_1; Methionine--tRNA ligase, mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D MS3_00006083 RARS1_1; Arginine--tRNA ligase, cytoplasmic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MS3_00002729 KARS1_1; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D MS3_00007600 DARS1_1; Aspartate--tRNA ligase, cytoplasmic K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MS3_00003132 AIMP1; Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
D MS3_00008057 hypothetical protein K15438 AIMP2; aminoacyl tRNA synthase complex-interacting multifunctional protein 2
C Other AARSs
D MS3_00002701 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MS3_00004029 AARS2_1; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MS3_00009590 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D MS3_00010919 SARS1; Serine--tRNA ligase, cytoplasmic K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D MS3_00004317 TWN2_1; Valine--tRNA ligase, mitochondrial 1, variant 2 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MS3_00009746 VARS1_1; Valine--tRNA ligase, variant 2 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MS3_00005533 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D MS3_00008575 FARS2_1; Phenylalanyl-tRNA synthetase, variant 2 K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D MS3_00006390 YARS2_1; Tyrosine--tRNA ligase, mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MS3_00009041 YARS1_1; Tyrosine--tRNA ligase, cytoplasmic, variant 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MS3_00006749 WARS1_1; Tryptophan--tRNA ligase, cytoplasmic, variant 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
C AARS associated factors
D MS3_00002671 TRNAU1AP; tRNA selenocysteine 1-associated protein 1 K25102 TRNAU1AP; tRNA selenocysteine 1-associated protein 1
D MS3_00002556 HINT2_1; Histidine triad nucleotide-binding protein 2, mitochondrial K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D MS3_00006784 HINT3; Histidine triad nucleotide-binding protein 3 K12150 HINT3; adenosine 5'-monophosphoramidase HINT3 [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
D MS3_00007172 ADAT2_1; tRNA-specific adenosine deaminase 2 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
C Dihydorouridine synthases
D MS3_00008578 DUS2L; tRNA-dihydrouridine(20) synthase [NAD(P)+]-like K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
C Methylthiotransferase
C Methyltransferases
D MS3_00005870 TRMT1_1; tRNA methyltransferase 1, variant 2 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D MS3_00003735 NSUN2; tRNA (cytosine(34)-C(5))-methyltransferase K15335 NSUN2; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203]
D MS3_00003972 MNAT1; CDK-activating kinase assembly factor MAT1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D MS3_00004154 TRMT61A_1; tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D MS3_00007960 TRMT6; tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D MS3_00002826 FTSJ1_1; putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, variant 2 K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D MS3_00004085 METTL2A_1; Methyltransferase-like protein 2-A K24974 METTL2; tRNA N(3)-methylcytidine methyltransferase METTL2 [EC:2.1.1.-]
D MS3_00006720 TRMT10B; tRNA methyltransferase 10 B K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D MS3_00007963 TRMT13_1; tRNA:m(4)X modification enzyme TRM13 K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D MS3_00020003 TRMT44; tRNA methyltransferase 44 K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211]
D MS3_00006991 WDR4_1; WD repeat-containing protein 4, variant 2 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D MS3_00005062 hypothetical protein K15448 TRM112; multifunctional methyltransferase subunit TRM112
D MS3_00007655 TRDMT1_1; tRNA (cytosine-5-)-methyltransferase, variant 3 K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
C Psudouridine synthases
D MS3_00008101 PUS1; tRNA pseudouridine synthase 1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D MS3_00007398 PUS10; putative tRNA pseudouridine synthase Pus10, variant 2 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
C Thiolation factors
D MS3_00007269 hypothetical protein K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D MS3_00002234 CTU1_1; cytosolic thiouridylase subunit Ctu1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D MS3_00008234 NFS1_5; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D MS3_00005640 MOCS3; Molybdenum cofactor synthesis protein 3 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D MS3_00006340 hypothetical protein K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
C Elongator complex
D MS3_00007369 hypothetical protein K11373 ELP1; elongator complex protein 1
D MS3_00009194 ELP3_1; Elongator subunit K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D MS3_00002603 ELP4; Elongator subunit elp4 K11375 ELP4; elongator complex protein 4
C Elongator related proteins
C Other tRNA modification factors
D MS3_00008305 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D MS3_00002243 TRIT1_1; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D MS3_00007018 QTRTD1_1; Queuine tRNA-ribosyltransferase subunit qtrtd1, variant 2 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D MS3_00003239 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1
D MS3_00008309 ATE1_1; Arginyl-tRNA--protein transferase 1, variant 2 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
B tRNA degradation factors
C TRAMP complex
D MS3_00003317 PAPD5_1; Non-canonical poly(A) RNA polymerase papd5, variant 2 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D MS3_00004207 hypothetical protein K12597 AIR1_2; protein AIR1/2
C Rapid tRNA decay (RTD) pathway factors
D MS3_00009573 XRN1_1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D MS3_00001657 BPNT1_1; 3'(2'),5'-bisphosphate nucleotidase 1, variant 3 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D MS3_00009209 hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D MS3_00010314 ELAC2_2; Zinc phosphodiesterase ELAC protein 2 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
D MS3_00005153 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D MS3_00006004 LARS2_1; putative leucine--tRNA ligase, mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MS3_00003765 PARS2_1; prolyl-tRNA synthetase, variant 2 K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D MS3_00006390 YARS2_1; Tyrosine--tRNA ligase, mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MS3_00009041 YARS1_1; Tyrosine--tRNA ligase, cytoplasmic, variant 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MS3_00006749 WARS1_1; Tryptophan--tRNA ligase, cytoplasmic, variant 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D MS3_00009608 IARS1_1; Isoleucine--tRNA ligase, cytoplasmic, variant 3 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MS3_00006432 IARS2_1; Isoleucine--tRNA ligase, mitochondrial, variant 3 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MS3_00002729 KARS1_1; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D MS3_00002701 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MS3_00004029 AARS2_1; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MS3_00004317 TWN2_1; Valine--tRNA ligase, mitochondrial 1, variant 2 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MS3_00009746 VARS1_1; Valine--tRNA ligase, variant 2 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MS3_00008445 MARS2_1; Methionine--tRNA ligase, mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D MS3_00010919 SARS1; Serine--tRNA ligase, cytoplasmic K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D MS3_00006519 EARS2; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D MS3_00006083 RARS1_1; Arginine--tRNA ligase, cytoplasmic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MS3_00008575 FARS2_1; Phenylalanyl-tRNA synthetase, variant 2 K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D MS3_00005533 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D MS3_00009590 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferases
C Methyltransferases
C Psudouridine synthases
D MS3_00008101 PUS1; tRNA pseudouridine synthase 1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
C Thiolation factors
D MS3_00008234 NFS1_5; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Other tRNA modification factors
D MS3_00002243 TRIT1_1; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D MS3_00006242 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D MS3_00008305 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
B tRNA degradation factors
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024